MD16G1165100.v1.1

Bifunctional epoxide hydrolase 2-like

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr16
Physical Location & Seq
Reverse (-)
13689957 .. 13693328
3372 bp
Loading structure...
UTR
Exon/CDS
Intron
MD16G1165100.v1.1.491

Sequence Viewer

Length: 969 bp
ATGGAGTCGCAGGGAATAGAGCACCGAACAGTCCCAGTGAACGGCATCAACATGCACGTCGCCGAGAAAGGGAATGGCCCACTCATCCTCTTCGTCCACGGCTTTCCTGAGCTCTGGTACTCCTGGCGCCACCAAATCCTCGCCCTCTCCGCCCTCGGCTACCGCGCTGTCGCCCCCGACCTCCGAGGGTACGGCGATACCGACGCCCCCGCCTCCCCTTCCAGCTACAACTGCCTCCACGTGGTCGGAGACCTCGTGGCGCTCCTGGACGCCATCGCACCTGATCAGGAGCAGGTGTTCGTGGTGGCCCACGACTGGGGGGCCATCATCGCTTGGTACCTCTGCCTGTTCCGGCCCGACCGGGTCAAAGCCTTGGTCAGCTTGAGCGTGCAGTTCATGCCGCGAAACCCTCAGAGGAAGGTCATCGAATCGCTTCAAGCTGCTTATGGCGATGACTACTACATCTGCAGATTTCAGGAGCCAGGAGTGATAGAAGCTGAGTTTGCTCAGATGGGCACTACAAGAGTTATCAAGGAGTTTCTAACATATAGGAATCCTGGTCCACTTTTCCTGCCTAAAGGCAAAGGATTTGGACATCCCACAGATACTCCTATTGTCTTGCCAAGTTGGTTGTCTGAGGATGAAGTGAACTACTACGTCGCCAAATTTGACAAGACGGGCTTCACTGGCGGCATAAACTACTACCGGAATTTGGACATAAATTGGGAACTGACTGCACCATGGACTGGGGCTCAAGTGAAAGTTCCGGTGAAGTTTGTTGTGGGAGACCAGGACCTAGTTTACAACTCTTTAGGTGCTCAGGACTTCATACACAAAGGCGGGTTCAAGAAATTTGTGCCGCTTCTGGAAGAAGTAGTTGTATTGGAAGGAGTTGCCCATTTTCTGCAACAAGAAAAGCCTGATGAAATCAGCAAACACATTCACGACTTCATTAGGAAATTCCATTAG

Protein Analysis

323

Amino Acids

36.32

Weight (kDa)

5.83

Isoelectric Point (pI)

34.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Abhydrolase_1 PF00561 27 - 307 8.7e-25 alpha/beta hydrolase fold
Hydrolase_4 PF12146 28 - 142 3.6e-11 Serine aminopeptidase, S33
Abhydrolase_6 PF12697 29 - 310 6.2e-20 Alpha/beta hydrolase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 283
Acc36I ACCTGC 1 cut(s) 283
Acc65I GGTACC 1 cut(s) 336
AccB1I GGYRCC 2 cut(s) 126, 336
AccB7I CCANNNNNTGG 1 cut(s) 746
AccII CGCG 2 cut(s) 165, 403
AciI CCGC 7 cut(s) 150, 163, 210, 401, 690, 840, 860
AcsI RAATTY 4 cut(s) 665, 709, 851, 959
AcvI CACGTG 1 cut(s) 241
AcyI GRCGYC 3 cut(s) 127, 204, 270
AfaI GTAC 3 cut(s) 119, 191, 338
AfiI CCNNNNNNNGG 7 cut(s) 41, 69, 241, 315, 316, 712, 746
AgsI TTSAA 2 cut(s) 437, 847
AjiI CACGTC 1 cut(s) 58
AjnI CCWGG 5 cut(s) 122, 264, 481, 556, 789
AloI GAACNNNNNNTCC 2 cut(s) 281, 313
AluBI AGCT 5 cut(s) 112, 225, 381, 440, 497
AluI AGCT 5 cut(s) 112, 225, 381, 440, 497
Alw21I GWGCWC 3 cut(s) 24, 114, 820
Alw26I GTCTC 2 cut(s) 243, 780
AoxI GGCC 4 cut(s) 76, 306, 321, 353
ApeKI GCWGC 1 cut(s) 440
ApoI RAATTY 4 cut(s) 665, 709, 851, 959
ArsI GACNNNNNNTTYG 2 cut(s) 360, 392
Asp700I GAANNNNTTC 1 cut(s) 432
Asp718I GGTACC 1 cut(s) 336
AspLEI GCGC 3 cut(s) 129, 167, 262
AspS9I GGNCC 6 cut(s) 77, 307, 321, 354, 560, 793
AsuC2I CCSGG 1 cut(s) 362
AsuHPI GGTGA 1 cut(s) 781
AvaII GGWCC 2 cut(s) 560, 793
BaeGI GKGCMC 1 cut(s) 518
BanI GGYRCC 2 cut(s) 126, 336
BanII GRGCYC 2 cut(s) 114, 754
BauI CACGAG 1 cut(s) 254
BbrPI CACGTG 1 cut(s) 241
Bbv12I GWGCWC 3 cut(s) 24, 114, 820
BbvI GCAGC 1 cut(s) 427
BccI CCATC 3 cut(s) 281, 332, 505
BceAI ACGGC 3 cut(s) 58, 115, 208
BciT130I CCWGG 5 cut(s) 124, 266, 483, 558, 791
BclI TGATCA 1 cut(s) 283
BcnI CCSGG 1 cut(s) 362
BcoDI GTCTC 2 cut(s) 243, 780
BfaI CTAG 1 cut(s) 797
BfmI CTRYAG 1 cut(s) 466
BfoI RGCGCY 2 cut(s) 130, 263
BfuAI ACCTGC 1 cut(s) 283
BisI GCNGC 4 cut(s) 401, 441, 691, 860
BlsI GCNGC 4 cut(s) 402, 442, 692, 861
Bme1390I CCNGG 6 cut(s) 124, 266, 362, 483, 558, 791
Bme18I GGWCC 2 cut(s) 560, 793
BmgBI CACGTC 1 cut(s) 58
BmgT120I GGNCC 6 cut(s) 77, 307, 321, 354, 560, 793
BmiI GGNNCC 4 cut(s) 128, 322, 338, 480
BmrFI CCNGG 6 cut(s) 124, 266, 362, 483, 558, 791
BmrI ACTGGG 3 cut(s) 29, 325, 756
BmsI GCATC 1 cut(s) 54
BmuI ACTGGG 3 cut(s) 29, 325, 756
Bpu10I CCTNAGC 2 cut(s) 108, 819
BpuEI CTTGAG 2 cut(s) 403, 738
BpuMI CCSGG 1 cut(s) 362
BsaAI YACGTR 1 cut(s) 241
BsaHI GRCGYC 3 cut(s) 127, 204, 270
BsaI GGTCTC 2 cut(s) 243, 780
BsaJI CCNNGG 5 cut(s) 97, 154, 184, 372, 740
BsaWI WCCGGW 2 cut(s) 705, 766
BsaXI ACNNNNNCTCC 6 cut(s) 240, 270, 281, 311, 592, 622
Bsc4I CCNNNNNNNGG 7 cut(s) 41, 69, 241, 315, 316, 712, 746
Bse1I ACTGG 4 cut(s) 35, 320, 691, 751
BseBI CCWGG 5 cut(s) 124, 266, 483, 558, 791
BseDI CCNNGG 5 cut(s) 97, 154, 184, 372, 740
BseGI GGATG 3 cut(s) 84, 595, 646
BseLI CCNNNNNNNGG 7 cut(s) 41, 69, 241, 315, 316, 712, 746
BseMII CTCAG 6 cut(s) 99, 425, 489, 521, 627, 833
BseNI ACTGG 4 cut(s) 35, 320, 691, 751
BseSI GKGCMC 1 cut(s) 518
BseXI GCAGC 1 cut(s) 427
BsgI GTGCAG 2 cut(s) 410, 720
Bsh1236I CGCG 2 cut(s) 165, 403
Bsh1285I CGRYCG 1 cut(s) 361
BshFI GGCC 4 cut(s) 78, 308, 323, 355
BshNI GGYRCC 2 cut(s) 126, 336
BsiEI CGRYCG 1 cut(s) 361
BsiHKAI GWGCWC 3 cut(s) 24, 114, 820
BsiSI CCGG 4 cut(s) 352, 361, 706, 767
BslFI GGGAC 1 cut(s) 17
BslI CCNNNNNNNGG 7 cut(s) 41, 69, 241, 315, 316, 712, 746
BsmAI GTCTC 2 cut(s) 243, 780
BsmFI GGGAC 1 cut(s) 17
BsnI GGCC 4 cut(s) 78, 308, 323, 355
Bso31I GGTCTC 2 cut(s) 243, 780
Bsp1286I GDGCHC 5 cut(s) 24, 114, 518, 754, 820
Bsp143I GATC 1 cut(s) 283
Bsp19I CCATGG 1 cut(s) 740
BspACI CCGC 7 cut(s) 150, 163, 210, 401, 690, 840, 860
BspANI GGCC 4 cut(s) 78, 308, 323, 355
BspCNI CTCAG 6 cut(s) 100, 424, 490, 520, 628, 832
BspFNI CGCG 2 cut(s) 165, 403
BspLI GGNNCC 4 cut(s) 128, 322, 338, 480
BspMAI CTGCAG 1 cut(s) 470
BspMI ACCTGC 1 cut(s) 283
BspT107I GGYRCC 2 cut(s) 126, 336
BspTNI GGTCTC 2 cut(s) 243, 780
BsrI ACTGG 4 cut(s) 35, 320, 691, 751
BssECI CCNNGG 5 cut(s) 97, 154, 184, 372, 740
BssMI GATC 1 cut(s) 283
BssNI GRCGYC 3 cut(s) 127, 204, 270
BssSI CACGAG 1 cut(s) 254
BssT1I CCWWGG 2 cut(s) 372, 740
Bst2BI CACGAG 1 cut(s) 254
Bst2UI CCWGG 5 cut(s) 124, 266, 483, 558, 791
Bst4CI ACNGT 1 cut(s) 31
Bst6I CTCTTC 1 cut(s) 95
BstACI GRCGYC 3 cut(s) 127, 204, 270
BstAPI GCANNNNNTGC 1 cut(s) 397
BstBAI YACGTR 1 cut(s) 241
BstC8I GCNNGC 1 cut(s) 389
BstDEI CTNAG 6 cut(s) 108, 411, 498, 507, 636, 819
BstDSI CCRYGG 2 cut(s) 97, 740
BstF5I GGATG 3 cut(s) 84, 595, 646
BstFNI CGCG 2 cut(s) 165, 403
BstH2I RGCGCY 2 cut(s) 130, 263
BstHHI GCGC 3 cut(s) 129, 167, 262
BstKTI GATC 1 cut(s) 286
BstMAI GTCTC 2 cut(s) 243, 780
BstMBI GATC 1 cut(s) 283
BstMCI CGRYCG 1 cut(s) 361
BstMWI GCNNNNNNNGC 6 cut(s) 149, 231, 329, 397, 503, 687
BstNI CCWGG 5 cut(s) 124, 266, 483, 558, 791
BstNSI RCATGY 1 cut(s) 55
BstSCI CCNGG 6 cut(s) 122, 264, 360, 481, 556, 789
BstSFI CTRYAG 1 cut(s) 466
BstSLI GKGCMC 1 cut(s) 518
BstUI CGCG 2 cut(s) 165, 403
BstV1I GCAGC 1 cut(s) 427
BsuRI GGCC 4 cut(s) 78, 308, 323, 355
BtgI CCRYGG 2 cut(s) 97, 740
BtgZI GCGATG 3 cut(s) 259, 313, 465
BtrI CACGTC 1 cut(s) 58
BtsCI GGATG 3 cut(s) 84, 595, 646
BtsIMutI CAGTG 2 cut(s) 42, 684
BveI ACCTGC 1 cut(s) 283
Cac8I GCNNGC 1 cut(s) 389
CfoI GCGC 3 cut(s) 129, 167, 262
Cfr13I GGNCC 6 cut(s) 77, 307, 321, 354, 560, 793
CseI GACGC 2 cut(s) 212, 278
Csp6I GTAC 3 cut(s) 118, 190, 337
CviAII CATG 3 cut(s) 52, 397, 741
CviQI GTAC 3 cut(s) 118, 190, 337
DdeI CTNAG 6 cut(s) 108, 411, 498, 507, 636, 819
DinI GGCGCC 1 cut(s) 128
DpnI GATC 1 cut(s) 285
DpnII GATC 1 cut(s) 283
Eam1104I CTCTTC 1 cut(s) 95
EarI CTCTTC 1 cut(s) 95
EciI GGCGGA 1 cut(s) 139
Ecl136II GAGCTC 1 cut(s) 112
Eco130I CCWWGG 2 cut(s) 372, 740
Eco24I GRGCYC 2 cut(s) 114, 754
Eco31I GGTCTC 2 cut(s) 243, 780
Eco47I GGWCC 2 cut(s) 560, 793
Eco53kI GAGCTC 1 cut(s) 112
Eco72I CACGTG 1 cut(s) 241
EcoICRI GAGCTC 1 cut(s) 112
EcoO109I RGGNCCY 1 cut(s) 793
EcoRII CCWGG 5 cut(s) 122, 264, 481, 556, 789
EcoT14I CCWWGG 2 cut(s) 372, 740
EcoT38I GRGCYC 2 cut(s) 114, 754
EgeI GGCGCC 1 cut(s) 128
EheI GGCGCC 1 cut(s) 128
ErhI CCWWGG 2 cut(s) 372, 740
FaeI CATG 3 cut(s) 55, 400, 744
FaiI YATR 9 cut(s) 53, 398, 447, 547, 549, 695, 719, 742, 830
FalI AAGNNNNNCTT 2 cut(s) 665, 697
FaqI GGGAC 1 cut(s) 17
FatI CATG 3 cut(s) 51, 396, 740
FauI CCCGC 2 cut(s) 217, 833
FbaI TGATCA 1 cut(s) 283
Fnu4HI GCNGC 4 cut(s) 401, 441, 691, 860
FokI GGATG 3 cut(s) 71, 582, 653
FriOI GRGCYC 2 cut(s) 114, 754
Fsp4HI GCNGC 4 cut(s) 401, 441, 691, 860
FspBI CTAG 1 cut(s) 797
GlaI GCGC 3 cut(s) 128, 166, 261
GluI GCNGC 4 cut(s) 401, 441, 691, 860
HaeII RGCGCY 2 cut(s) 130, 263
HaeIII GGCC 4 cut(s) 78, 308, 323, 355
HapII CCGG 4 cut(s) 352, 361, 706, 767
HgaI GACGC 2 cut(s) 212, 278
HhaI GCGC 3 cut(s) 129, 167, 262
Hin1I GRCGYC 3 cut(s) 127, 204, 270
Hin1II CATG 3 cut(s) 55, 400, 744
Hin6I GCGC 3 cut(s) 127, 165, 260
HinP1I GCGC 3 cut(s) 127, 165, 260
HinfI GANTC 3 cut(s) 5, 428, 553
HpaII CCGG 4 cut(s) 352, 361, 706, 767
HphI GGTGA 1 cut(s) 781
Hpy166II GTNNAC 5 cut(s) 40, 97, 563, 649, 802
Hpy188I TCNGA 5 cut(s) 185, 248, 414, 510, 637
Hpy188III TCNNGA 7 cut(s) 107, 287, 476, 821, 847, 866, 944
Hpy8I GTNNAC 5 cut(s) 40, 97, 563, 649, 802
Hpy99I CGWCG 3 cut(s) 62, 206, 662
HpyAV CCTTC 3 cut(s) 228, 412, 881
HpyCH4III ACNGT 1 cut(s) 31
HpyCH4IV ACGT 3 cut(s) 57, 240, 657
HpyCH4V TGCA 5 cut(s) 55, 391, 468, 737, 907
HpyF10VI GCNNNNNNNGC 6 cut(s) 149, 231, 329, 397, 503, 687
HpyF3I CTNAG 6 cut(s) 108, 411, 498, 507, 636, 819
HpySE526I ACGT 3 cut(s) 57, 240, 657
Hsp92I GRCGYC 3 cut(s) 127, 204, 270
Hsp92II CATG 3 cut(s) 55, 400, 744
HspAI GCGC 3 cut(s) 127, 165, 260
KasI GGCGCC 1 cut(s) 126
KpnI GGTACC 1 cut(s) 340
Ksp22I TGATCA 1 cut(s) 283
Kzo9I GATC 1 cut(s) 283
LmnI GCTCC 3 cut(s) 267, 289, 478
Lsp1109I GCAGC 1 cut(s) 427
LweI GCATC 1 cut(s) 54
MaeI CTAG 1 cut(s) 797
MaeII ACGT 3 cut(s) 57, 240, 657
MalI GATC 1 cut(s) 285
MboI GATC 1 cut(s) 283
MboII GAAGA 2 cut(s) 82, 881
MhlI GDGCHC 5 cut(s) 24, 114, 518, 754, 820
MluCI AATT 5 cut(s) 665, 709, 721, 851, 959
Mly113I GGCGCC 1 cut(s) 127
MlyI GAGTC 1 cut(s) 14
MmeI TCCRAC 1 cut(s) 226
MroXI GAANNNNTTC 1 cut(s) 432
MslI CAYNNNNRTG 1 cut(s) 50
MspI CCGG 4 cut(s) 352, 361, 706, 767
MspR9I CCNGG 6 cut(s) 124, 266, 362, 483, 558, 791
MvaI CCWGG 5 cut(s) 124, 266, 483, 558, 791
MvnI CGCG 2 cut(s) 165, 403
MwoI GCNNNNNNNGC 6 cut(s) 149, 231, 329, 397, 503, 687
NarI GGCGCC 1 cut(s) 127
NciI CCSGG 1 cut(s) 362
NcoI CCATGG 1 cut(s) 740
NdeII GATC 1 cut(s) 283
NlaIII CATG 3 cut(s) 55, 400, 744
NlaIV GGNNCC 4 cut(s) 128, 322, 338, 480
NmeAIII GCCGAG 2 cut(s) 88, 135
NspI RCATGY 1 cut(s) 55
PaqCI CACCTGC 1 cut(s) 283
PcsI WCGNNNNNNNCGW 2 cut(s) 198, 252
PdmI GAANNNNTTC 1 cut(s) 432
PfeI GAWTC 2 cut(s) 428, 553
PflFI GACNNNGTC 1 cut(s) 362
PflMI CCANNNNNTGG 1 cut(s) 746
PfoI TCCNGGA 1 cut(s) 264
PkrI GCNGC 4 cut(s) 402, 442, 692, 861
PleI GAGTC 1 cut(s) 13
PluTI GGCGCC 1 cut(s) 130
PmaCI CACGTG 1 cut(s) 241
PmlI CACGTG 1 cut(s) 241
PpsI GAGTC 1 cut(s) 13
Ppu21I YACGTR 1 cut(s) 241
PpuMI RGGWCCY 1 cut(s) 793
Psp124BI GAGCTC 1 cut(s) 114
Psp5II RGGWCCY 1 cut(s) 793
Psp6I CCWGG 5 cut(s) 122, 264, 481, 556, 789
PspCI CACGTG 1 cut(s) 241
PspGI CCWGG 5 cut(s) 122, 264, 481, 556, 789
PspN4I GGNNCC 4 cut(s) 128, 322, 338, 480
PspPI GGNCC 6 cut(s) 77, 307, 321, 354, 560, 793
PspPPI RGGWCCY 1 cut(s) 793
PstI CTGCAG 1 cut(s) 470
PsyI GACNNNGTC 1 cut(s) 362
RsaI GTAC 3 cut(s) 119, 191, 338
RsaNI GTAC 3 cut(s) 118, 190, 337
RseI CAYNNNNRTG 1 cut(s) 50
SacI GAGCTC 1 cut(s) 114
SatI GCNGC 4 cut(s) 401, 441, 691, 860
Sau3AI GATC 1 cut(s) 283
Sau96I GGNCC 6 cut(s) 77, 307, 321, 354, 560, 793
SchI GAGTC 1 cut(s) 14
ScrFI CCNGG 6 cut(s) 124, 266, 362, 483, 558, 791
SduI GDGCHC 5 cut(s) 24, 114, 518, 754, 820
SfaNI GCATC 1 cut(s) 54
SfcI CTRYAG 1 cut(s) 466
SfoI GGCGCC 1 cut(s) 128
SinI GGWCC 2 cut(s) 560, 793
SmiMI CAYNNNNRTG 1 cut(s) 50
SmlI CTYRAG 2 cut(s) 382, 753
SmoI CTYRAG 2 cut(s) 382, 753
Sse9I AATT 5 cut(s) 665, 709, 721, 851, 959
SsiI CCGC 7 cut(s) 150, 163, 210, 401, 690, 840, 860
SspDI GGCGCC 1 cut(s) 126
SspMI CTAG 1 cut(s) 797
SstI GAGCTC 1 cut(s) 114
StyD4I CCNGG 6 cut(s) 122, 264, 360, 481, 556, 789
StyI CCWWGG 2 cut(s) 372, 740
TaaI ACNGT 1 cut(s) 31
TaiI ACGT 3 cut(s) 60, 243, 660
TaqI TCGA 1 cut(s) 426
TasI AATT 5 cut(s) 665, 709, 721, 851, 959
TauI GCSGC 3 cut(s) 403, 693, 862
TfiI GAWTC 2 cut(s) 428, 553
TscAI CASTG 2 cut(s) 42, 691
TseI GCWGC 1 cut(s) 440
TspDTI ATGAA 5 cut(s) 385, 657, 817, 939, 940
TspRI CASTG 2 cut(s) 42, 691
Tth111I GACNNNGTC 1 cut(s) 362
Van91I CCANNNNNTGG 1 cut(s) 746
VpaK11BI GGWCC 2 cut(s) 560, 793
XapI RAATTY 4 cut(s) 665, 709, 851, 959
XceI RCATGY 1 cut(s) 55
XmnI GAANNNNTTC 1 cut(s) 432
XspI CTAG 1 cut(s) 797
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.