MD16G1164900.v1.1

Bifunctional epoxide hydrolase 2-like

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr16
Physical Location & Seq
Forward (+)
13668300 .. 13671048
2749 bp
Loading structure...
UTR
Exon/CDS
Intron
MD16G1164900.v1.1.491

Sequence Viewer

Length: 930 bp
ATGGAGTCACAGGGAATAGAGCACCGAACAGTCGAAGTGAACGGCATCCACATGCACGTCACCGAGAAAGGGAATGGCCCACTCATCCTCTTCGTCCACTACTTTCCTGAGCTCTGGTACTCCTGGCGCCACCAAATCCTAGCCCTCTCCGACCTTGGCTACCGTGCCATAGCCCCTGACCTCCGAGGGTACGGCGACACCGACGCCCCCGCCTCCCCTTCCAGCTACACCTGTTTCCACATGGTCAGAGACCTCATGGCGCTCCTAGATGCCATCGCACCCGATCAGGAGCAGGTGTTCGTGGTAGCCCACGACTGGGGCACCCTCATCACTTGGTACCTCTGCCTGTTCAGGCCCGACCGGGTCAAAGCCTTGGTCAGCTTGAGTGTGCAGTTCATGCCGCGAAACCCTCAGAGGAAGGTCATCGAATCGCTTCAAGCTGCTTATGGTGATGACTACTACGTCTGCAAATTTCAGGAGCCTGGAGTGATAGAAGCTGAGTTTGCTCAGATGGGCACTACAAGAGTTATGAAGGAGTTTCTAACATATAGGAATCCTGGTCCACTGTTCCTACCTAAAGGCAAAGGATTTGGACATCCCACAGATACTCCTATTGTCTTGCCAAGTTGGTTGTCTGAGGATGAAGTGAACAACTACGCCGCCAAATTTGACAAGACGGGCTTCACCGGTGGCATAAACTACTACCGGAATTTGGACATGTACGTTCCGGTGAAGTTTGTTGTGGGAGACCAGGACCTAGTTTACAACTCTCTAGGTGCTCAGGACTTCATCCACAAAGGCGGGTTCAAGAAATATGTGCCGCTTCTGGAAGAAGTAGTTGTGCTGGAAGGAGTTGCCCATTTTCTGCAACAAGAAAAGCCTGATGAAATCAGCAAACACATTCACGACTTCCTCAAGAAATTCCATTAG

Protein Analysis

310

Amino Acids

35.29

Weight (kDa)

5.79

Isoelectric Point (pI)

39.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Abhydrolase_1 PF00561 27 - 292 1.3e-23 alpha/beta hydrolase fold
Abhydrolase_6 PF12697 29 - 297 7.6e-15 Alpha/beta hydrolase family
Hydrolase_4 PF12146 29 - 142 1.5e-08 Serine aminopeptidase, S33
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 283
AasI GACNNNNNNGTC 1 cut(s) 461
Acc36I ACCTGC 1 cut(s) 283
Acc65I GGTACC 1 cut(s) 336
AccB1I GGYRCC 3 cut(s) 126, 320, 336
AccII CGCG 1 cut(s) 403
AciI CCGC 5 cut(s) 210, 401, 660, 801, 821
AcsI RAATTY 4 cut(s) 470, 665, 709, 920
AcyI GRCGYC 2 cut(s) 127, 204
AfaI GTAC 4 cut(s) 119, 191, 338, 722
AfiI CCNNNNNNNGG 4 cut(s) 69, 315, 316, 712
AflIII ACRYGT 1 cut(s) 717
AgeI ACCGGT 1 cut(s) 686
AgsI TTSAA 2 cut(s) 437, 808
AjiI CACGTC 1 cut(s) 58
AjnI CCWGG 4 cut(s) 122, 481, 556, 750
AloI GAACNNNNNNTCC 2 cut(s) 281, 313
AluBI AGCT 5 cut(s) 112, 225, 381, 440, 497
AluI AGCT 5 cut(s) 112, 225, 381, 440, 497
Alw21I GWGCWC 3 cut(s) 24, 114, 781
Alw26I GTCTC 2 cut(s) 243, 741
AoxI GGCC 2 cut(s) 76, 353
ApeKI GCWGC 1 cut(s) 440
ApoI RAATTY 4 cut(s) 470, 665, 709, 920
ArsI GACNNNNNNTTYG 2 cut(s) 360, 392
AsiGI ACCGGT 1 cut(s) 686
Asp700I GAANNNNTTC 1 cut(s) 432
Asp718I GGTACC 1 cut(s) 336
AspLEI GCGC 2 cut(s) 129, 262
AspS9I GGNCC 4 cut(s) 77, 354, 560, 754
AsuC2I CCSGG 1 cut(s) 362
AsuHPI GGTGA 4 cut(s) 52, 461, 676, 742
AvaII GGWCC 2 cut(s) 560, 754
BaeGI GKGCMC 2 cut(s) 323, 518
BanI GGYRCC 3 cut(s) 126, 320, 336
BanII GRGCYC 1 cut(s) 114
Bbv12I GWGCWC 3 cut(s) 24, 114, 781
BbvI GCAGC 1 cut(s) 427
BccI CCATC 2 cut(s) 281, 505
BceAI ACGGC 2 cut(s) 58, 208
BciT130I CCWGG 4 cut(s) 124, 483, 558, 752
BcnI CCSGG 1 cut(s) 362
BcoDI GTCTC 2 cut(s) 243, 741
BfaI CTAG 4 cut(s) 140, 266, 758, 773
BfoI RGCGCY 2 cut(s) 130, 263
BfuAI ACCTGC 1 cut(s) 283
BisI GCNGC 4 cut(s) 401, 441, 660, 821
BlsI GCNGC 4 cut(s) 402, 442, 661, 822
Bme1390I CCNGG 5 cut(s) 124, 362, 483, 558, 752
Bme18I GGWCC 2 cut(s) 560, 754
BmgBI CACGTC 1 cut(s) 58
BmgT120I GGNCC 4 cut(s) 77, 354, 560, 754
BmiI GGNNCC 4 cut(s) 128, 322, 338, 480
BmrFI CCNGG 5 cut(s) 124, 362, 483, 558, 752
BmrI ACTGGG 1 cut(s) 325
BmsI GCATC 2 cut(s) 54, 259
BmuI ACTGGG 1 cut(s) 325
BpmI CTGGAG 1 cut(s) 504
Bpu10I CCTNAGC 2 cut(s) 108, 780
BpuEI CTTGAG 2 cut(s) 403, 899
BpuMI CCSGG 1 cut(s) 362
BsaHI GRCGYC 2 cut(s) 127, 204
BsaI GGTCTC 2 cut(s) 243, 741
BsaJI CCNNGG 3 cut(s) 154, 184, 372
BsaWI WCCGGW 3 cut(s) 686, 705, 727
BsaXI ACNNNNNCTCC 4 cut(s) 281, 311, 592, 622
Bsc4I CCNNNNNNNGG 4 cut(s) 69, 315, 316, 712
Bse118I RCCGGY 1 cut(s) 686
Bse1I ACTGG 1 cut(s) 320
BseBI CCWGG 4 cut(s) 124, 483, 558, 752
BseDI CCNNGG 3 cut(s) 154, 184, 372
BseGI GGATG 5 cut(s) 45, 84, 595, 646, 789
BseLI CCNNNNNNNGG 4 cut(s) 69, 315, 316, 712
BseMII CTCAG 6 cut(s) 99, 425, 489, 521, 627, 794
BseNI ACTGG 1 cut(s) 320
BseSI GKGCMC 2 cut(s) 323, 518
BseXI GCAGC 1 cut(s) 427
BsgI GTGCAG 1 cut(s) 410
Bsh1236I CGCG 1 cut(s) 403
Bsh1285I CGRYCG 1 cut(s) 361
BshFI GGCC 2 cut(s) 78, 355
BshNI GGYRCC 3 cut(s) 126, 320, 336
BshTI ACCGGT 1 cut(s) 686
BsiEI CGRYCG 1 cut(s) 361
BsiHKAI GWGCWC 3 cut(s) 24, 114, 781
BsiSI CCGG 4 cut(s) 361, 687, 706, 728
BslI CCNNNNNNNGG 4 cut(s) 69, 315, 316, 712
BsmAI GTCTC 2 cut(s) 243, 741
BsnI GGCC 2 cut(s) 78, 355
Bso31I GGTCTC 2 cut(s) 243, 741
Bsp1286I GDGCHC 5 cut(s) 24, 114, 323, 518, 781
Bsp143I GATC 1 cut(s) 283
BspACI CCGC 5 cut(s) 210, 401, 660, 801, 821
BspANI GGCC 2 cut(s) 78, 355
BspCNI CTCAG 6 cut(s) 100, 424, 490, 520, 628, 793
BspFNI CGCG 1 cut(s) 403
BspLI GGNNCC 4 cut(s) 128, 322, 338, 480
BspMI ACCTGC 1 cut(s) 283
BspT107I GGYRCC 3 cut(s) 126, 320, 336
BspTNI GGTCTC 2 cut(s) 243, 741
BsrFI RCCGGY 1 cut(s) 686
BsrI ACTGG 1 cut(s) 320
BssAI RCCGGY 1 cut(s) 686
BssECI CCNNGG 3 cut(s) 154, 184, 372
BssMI GATC 1 cut(s) 283
BssNI GRCGYC 2 cut(s) 127, 204
BssT1I CCWWGG 2 cut(s) 154, 372
Bst2UI CCWGG 4 cut(s) 124, 483, 558, 752
Bst4CI ACNGT 3 cut(s) 31, 164, 567
Bst6I CTCTTC 1 cut(s) 95
BstACI GRCGYC 2 cut(s) 127, 204
BstAPI GCANNNNNTGC 1 cut(s) 397
BstDEI CTNAG 6 cut(s) 108, 411, 498, 507, 636, 780
BstF5I GGATG 5 cut(s) 45, 84, 595, 646, 789
BstFNI CGCG 1 cut(s) 403
BstH2I RGCGCY 2 cut(s) 130, 263
BstHHI GCGC 2 cut(s) 129, 262
BstKTI GATC 1 cut(s) 286
BstMAI GTCTC 2 cut(s) 243, 741
BstMBI GATC 1 cut(s) 283
BstMCI CGRYCG 1 cut(s) 361
BstMWI GCNNNNNNNGC 2 cut(s) 397, 503
BstNI CCWGG 4 cut(s) 124, 483, 558, 752
BstNSI RCATGY 2 cut(s) 55, 721
BstSCI CCNGG 5 cut(s) 122, 360, 481, 556, 750
BstSLI GKGCMC 2 cut(s) 323, 518
BstUI CGCG 1 cut(s) 403
BstV1I GCAGC 1 cut(s) 427
BsuRI GGCC 2 cut(s) 78, 355
BtgZI GCGATG 1 cut(s) 259
BtrI CACGTC 1 cut(s) 58
BtsCI GGATG 5 cut(s) 45, 84, 595, 646, 789
BtsIMutI CAGTG 1 cut(s) 563
BveI ACCTGC 1 cut(s) 283
CfoI GCGC 2 cut(s) 129, 262
Cfr10I RCCGGY 1 cut(s) 686
Cfr13I GGNCC 4 cut(s) 77, 354, 560, 754
CseI GACGC 1 cut(s) 212
Csp6I GTAC 4 cut(s) 118, 190, 337, 721
CspAI ACCGGT 1 cut(s) 686
CviAII CATG 5 cut(s) 52, 241, 256, 397, 718
CviQI GTAC 4 cut(s) 118, 190, 337, 721
DdeI CTNAG 6 cut(s) 108, 411, 498, 507, 636, 780
DinI GGCGCC 1 cut(s) 128
DpnI GATC 1 cut(s) 285
DpnII GATC 1 cut(s) 283
DrdI GACNNNNNNGTC 1 cut(s) 461
DseDI GACNNNNNNGTC 1 cut(s) 461
Eam1104I CTCTTC 1 cut(s) 95
EarI CTCTTC 1 cut(s) 95
Ecl136II GAGCTC 1 cut(s) 112
Eco130I CCWWGG 2 cut(s) 154, 372
Eco24I GRGCYC 1 cut(s) 114
Eco31I GGTCTC 2 cut(s) 243, 741
Eco47I GGWCC 2 cut(s) 560, 754
Eco53kI GAGCTC 1 cut(s) 112
EcoICRI GAGCTC 1 cut(s) 112
EcoO109I RGGNCCY 1 cut(s) 754
EcoRII CCWGG 4 cut(s) 122, 481, 556, 750
EcoT14I CCWWGG 2 cut(s) 154, 372
EcoT38I GRGCYC 1 cut(s) 114
EgeI GGCGCC 1 cut(s) 128
EheI GGCGCC 1 cut(s) 128
ErhI CCWWGG 2 cut(s) 154, 372
FaeI CATG 5 cut(s) 55, 244, 259, 400, 721
FalI AAGNNNNNCTT 2 cut(s) 665, 697
FatI CATG 5 cut(s) 51, 240, 255, 396, 717
FauI CCCGC 2 cut(s) 217, 794
Fnu4HI GCNGC 4 cut(s) 401, 441, 660, 821
FokI GGATG 5 cut(s) 32, 71, 582, 653, 776
FriOI GRGCYC 1 cut(s) 114
Fsp4HI GCNGC 4 cut(s) 401, 441, 660, 821
FspBI CTAG 4 cut(s) 140, 266, 758, 773
GlaI GCGC 2 cut(s) 128, 261
GluI GCNGC 4 cut(s) 401, 441, 660, 821
GsuI CTGGAG 1 cut(s) 504
HaeII RGCGCY 2 cut(s) 130, 263
HaeIII GGCC 2 cut(s) 78, 355
HapII CCGG 4 cut(s) 361, 687, 706, 728
HgaI GACGC 1 cut(s) 212
HhaI GCGC 2 cut(s) 129, 262
Hin1I GRCGYC 2 cut(s) 127, 204
Hin1II CATG 5 cut(s) 55, 244, 259, 400, 721
Hin6I GCGC 2 cut(s) 127, 260
HinP1I GCGC 2 cut(s) 127, 260
HinfI GANTC 3 cut(s) 5, 428, 553
HpaII CCGG 4 cut(s) 361, 687, 706, 728
HphI GGTGA 4 cut(s) 52, 461, 676, 742
Hpy166II GTNNAC 5 cut(s) 40, 97, 563, 649, 763
Hpy188I TCNGA 6 cut(s) 151, 185, 248, 414, 510, 637
Hpy188III TCNNGA 8 cut(s) 107, 287, 476, 782, 808, 827, 905, 916
Hpy8I GTNNAC 5 cut(s) 40, 97, 563, 649, 763
Hpy99I CGWCG 1 cut(s) 206
HpyAV CCTTC 4 cut(s) 228, 412, 526, 842
HpyCH4III ACNGT 3 cut(s) 31, 164, 567
HpyCH4IV ACGT 3 cut(s) 57, 462, 723
HpyCH4V TGCA 4 cut(s) 55, 391, 468, 868
HpyF10VI GCNNNNNNNGC 2 cut(s) 397, 503
HpyF3I CTNAG 6 cut(s) 108, 411, 498, 507, 636, 780
HpySE526I ACGT 3 cut(s) 57, 462, 723
Hsp92I GRCGYC 2 cut(s) 127, 204
Hsp92II CATG 5 cut(s) 55, 244, 259, 400, 721
HspAI GCGC 2 cut(s) 127, 260
KasI GGCGCC 1 cut(s) 126
KpnI GGTACC 1 cut(s) 340
Kzo9I GATC 1 cut(s) 283
LmnI GCTCC 3 cut(s) 267, 289, 478
Lsp1109I GCAGC 1 cut(s) 427
LweI GCATC 2 cut(s) 54, 259
MaeI CTAG 4 cut(s) 140, 266, 758, 773
MaeII ACGT 3 cut(s) 57, 462, 723
MaeIII GTNAC 2 cut(s) 6, 58
MalI GATC 1 cut(s) 285
MboI GATC 1 cut(s) 283
MboII GAAGA 2 cut(s) 82, 842
MhlI GDGCHC 5 cut(s) 24, 114, 323, 518, 781
MluCI AATT 4 cut(s) 470, 665, 709, 920
Mly113I GGCGCC 1 cut(s) 127
MlyI GAGTC 1 cut(s) 14
MmeI TCCRAC 1 cut(s) 174
MroXI GAANNNNTTC 1 cut(s) 432
MslI CAYNNNNRTG 1 cut(s) 50
MspI CCGG 4 cut(s) 361, 687, 706, 728
MspR9I CCNGG 5 cut(s) 124, 362, 483, 558, 752
MvaI CCWGG 4 cut(s) 124, 483, 558, 752
MvnI CGCG 1 cut(s) 403
MwoI GCNNNNNNNGC 2 cut(s) 397, 503
NarI GGCGCC 1 cut(s) 127
NciI CCSGG 1 cut(s) 362
NdeII GATC 1 cut(s) 283
NlaIII CATG 5 cut(s) 55, 244, 259, 400, 721
NlaIV GGNNCC 4 cut(s) 128, 322, 338, 480
NmuCI GTSAC 2 cut(s) 6, 58
NspI RCATGY 2 cut(s) 55, 721
PaqCI CACCTGC 1 cut(s) 283
PciI ACATGT 1 cut(s) 717
PcsI WCGNNNNNNNCGW 1 cut(s) 198
PdmI GAANNNNTTC 1 cut(s) 432
PfeI GAWTC 2 cut(s) 428, 553
PflFI GACNNNGTC 1 cut(s) 362
PinAI ACCGGT 1 cut(s) 686
PkrI GCNGC 4 cut(s) 402, 442, 661, 822
PleI GAGTC 1 cut(s) 13
PluTI GGCGCC 1 cut(s) 130
PpsI GAGTC 1 cut(s) 13
PpuMI RGGWCCY 1 cut(s) 754
PscI ACATGT 1 cut(s) 717
Psp124BI GAGCTC 1 cut(s) 114
Psp5II RGGWCCY 1 cut(s) 754
Psp6I CCWGG 4 cut(s) 122, 481, 556, 750
PspGI CCWGG 4 cut(s) 122, 481, 556, 750
PspN4I GGNNCC 4 cut(s) 128, 322, 338, 480
PspPI GGNCC 4 cut(s) 77, 354, 560, 754
PspPPI RGGWCCY 1 cut(s) 754
PsyI GACNNNGTC 1 cut(s) 362
RsaI GTAC 4 cut(s) 119, 191, 338, 722
RsaNI GTAC 4 cut(s) 118, 190, 337, 721
RseI CAYNNNNRTG 1 cut(s) 50
SacI GAGCTC 1 cut(s) 114
SatI GCNGC 4 cut(s) 401, 441, 660, 821
Sau3AI GATC 1 cut(s) 283
Sau96I GGNCC 4 cut(s) 77, 354, 560, 754
SchI GAGTC 1 cut(s) 14
ScrFI CCNGG 5 cut(s) 124, 362, 483, 558, 752
SduI GDGCHC 5 cut(s) 24, 114, 323, 518, 781
SfaNI GCATC 2 cut(s) 54, 259
SfoI GGCGCC 1 cut(s) 128
SgrAI CRCCGGYG 1 cut(s) 686
SinI GGWCC 2 cut(s) 560, 754
SmiMI CAYNNNNRTG 1 cut(s) 50
SmlI CTYRAG 2 cut(s) 382, 914
SmoI CTYRAG 2 cut(s) 382, 914
Sse9I AATT 4 cut(s) 470, 665, 709, 920
SsiI CCGC 5 cut(s) 210, 401, 660, 801, 821
SspDI GGCGCC 1 cut(s) 126
SspMI CTAG 4 cut(s) 140, 266, 758, 773
SstI GAGCTC 1 cut(s) 114
StyD4I CCNGG 5 cut(s) 122, 360, 481, 556, 750
StyI CCWWGG 2 cut(s) 154, 372
TaaI ACNGT 3 cut(s) 31, 164, 567
TaiI ACGT 3 cut(s) 60, 465, 726
TaqI TCGA 2 cut(s) 33, 426
TasI AATT 4 cut(s) 470, 665, 709, 920
TauI GCSGC 3 cut(s) 403, 662, 823
TfiI GAWTC 2 cut(s) 428, 553
TscAI CASTG 1 cut(s) 570
TseFI GTSAC 2 cut(s) 6, 58
TseI GCWGC 1 cut(s) 440
Tsp45I GTSAC 2 cut(s) 6, 58
TspDTI ATGAA 5 cut(s) 385, 545, 657, 778, 900
TspRI CASTG 1 cut(s) 570
Tth111I GACNNNGTC 1 cut(s) 362
VpaK11BI GGWCC 2 cut(s) 560, 754
XapI RAATTY 4 cut(s) 470, 665, 709, 920
XceI RCATGY 2 cut(s) 55, 721
XmnI GAANNNNTTC 1 cut(s) 432
XspI CTAG 4 cut(s) 140, 266, 758, 773
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.