Rw4G021090

Bifunctional epoxide hydrolase 2-like

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
Physical Location & Seq
Reverse (-)
45554884 .. 45556914
2031 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G021090.1

Sequence Viewer

Length: 963 bp
ATGGAGGGAGTAGAGCACAGAACGATCAAAGTCAACGGCATTAACATGCACGTAGCCGAGAAAGGCCAAGGCCCGGTGGTCCTATTCCTCCACGGCTTCCCGGAGCTCTGGTACTCATGGAGGCACCAAATCCAGACCCTGGCCTCGCTCGGCTACCGAGCCGTTGCGCCGGACCTCCGCGGCTTCGGTGACACCGACGCGCCGGCCGACTCGTCGAGCTACACTTGCTTCCACGTGGTGGGAGATCTCGTGGCGCTATTGGACGCTGTCGCCGGTGACCAGGAGAAGGTGTTCGTGGTCGGGCACGACTGGGGGGCAATCATGGCTTGGTATCTCTGCCTGTTTCGGCCGGACCGAGTCAAGGCTCTGGTCAACTTGAGCGTGCAATTCTTTCCTAGAAATCCTCAGATGAAGTTTGTTGAATCCATGAAAGCTGCTTATGGGGACGACTATTATATTTGCAGATTTCAGGAGCCTGGAGAGATAGAAGCCGAGTTCGCCCAAATTGGTACTGCAAGAGTTATTAGGGAATTCTTGACGTTTCGCCACCCTGGTCCGCTTTTCCTCCCTAAAGGTAAATTTTTTGGACATCCCCCAGATGCTCCAATCGCCTTGCCAAGTTGGTTGTCTGAGGATGATGTTAACTACTATGTCAGCAAATTTGAGAAGAAGGGCTTCACAGGTGGCATAAACTACTACCGAAACCTTGACCGAAATTGGGAACTCCTTGCACCCTGGACTGGCGCTCAAGTGAAAGTTCCAGTTAAGTTCATTGTGGGAGACCAAGACCTTGTTTATAATTCTCTGGGCGCCAAGGATTTCATACACAATGGCGGGTTCAAGAAATATGTGCCATTCTTGGAAGAGGTAGTTGTGATGGAAGGAGTTGCCCATTTTAACAACCAAGAAAAGGCCGATGAAATCAGTGAACACATTCACGACTTCATCAAGAAATTCCAGTAA

Protein Analysis

320

Amino Acids

36.36

Weight (kDa)

5.84

Isoelectric Point (pI)

27.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Chlorophyllase PF07224 19 - 115 2.1e-07 Chlorophyllase
Abhydrolase_1 PF00561 25 - 132 4e-25 alpha/beta hydrolase fold
Hydrolase_4 PF12146 26 - 136 1.8e-12 Serine aminopeptidase, S33
Abhydrolase_6 PF12697 27 - 309 3.9e-19 Alpha/beta hydrolase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 798
AccB1I GGYRCC 2 cut(s) 123, 809
AccB7I CCANNNNNTGG 2 cut(s) 139, 238
AccII CGCG 2 cut(s) 180, 200
AciI CCGC 4 cut(s) 178, 180, 557, 834
AcoI YGGCCR 2 cut(s) 204, 347
AcsI RAATTY 4 cut(s) 530, 578, 659, 953
AcvI CACGTG 1 cut(s) 235
AcyI GRCGYC 1 cut(s) 810
AdeI CACNNNGTG 1 cut(s) 238
AfaI GTAC 2 cut(s) 113, 511
AfiI CCNNNNNNNGG 8 cut(s) 73, 139, 238, 286, 361, 718, 740, 910
AgsI TTSAA 2 cut(s) 422, 841
AjnI CCWGG 5 cut(s) 138, 279, 475, 550, 734
AloI GAACNNNNNNTCC 2 cut(s) 275, 307
AluBI AGCT 3 cut(s) 106, 219, 434
AluI AGCT 3 cut(s) 106, 219, 434
Alw21I GWGCWC 2 cut(s) 18, 108
Alw26I GTCTC 1 cut(s) 774
AlwNI CAGNNNCTG 1 cut(s) 139
AoxI GGCC 6 cut(s) 64, 70, 141, 204, 347, 912
ApeKI GCWGC 1 cut(s) 434
ApoI RAATTY 4 cut(s) 530, 578, 659, 953
Asp700I GAANNNNTTC 3 cut(s) 290, 674, 933
AspLEI GCGC 5 cut(s) 169, 202, 256, 746, 812
AspS9I GGNCC 5 cut(s) 71, 79, 172, 352, 554
AsuC2I CCSGG 2 cut(s) 74, 101
AsuHPI GGTGA 2 cut(s) 200, 287
AvaII GGWCC 4 cut(s) 79, 172, 352, 554
BaeGI GKGCMC 1 cut(s) 306
BanI GGYRCC 2 cut(s) 123, 809
BanII GRGCYC 1 cut(s) 108
BauI CACGAG 1 cut(s) 248
BbrPI CACGTG 1 cut(s) 235
Bbv12I GWGCWC 2 cut(s) 18, 108
BbvI GCAGC 1 cut(s) 421
BccI CCATC 1 cut(s) 871
BceAI ACGGC 3 cut(s) 52, 109, 146
BciT130I CCWGG 5 cut(s) 140, 281, 477, 552, 736
BcnI CCSGG 2 cut(s) 74, 101
BcoDI GTCTC 1 cut(s) 774
BfaI CTAG 1 cut(s) 396
BfoI RGCGCY 3 cut(s) 257, 747, 813
BglII AGATCT 1 cut(s) 244
BisI GCNGC 2 cut(s) 181, 435
BlsI GCNGC 2 cut(s) 182, 436
Bme1390I CCNGG 7 cut(s) 74, 101, 140, 281, 477, 552, 736
Bme18I GGWCC 4 cut(s) 79, 172, 352, 554
BmgT120I GGNCC 5 cut(s) 71, 79, 172, 352, 554
BmiI GGNNCC 3 cut(s) 125, 474, 811
BmrFI CCNGG 7 cut(s) 74, 101, 140, 281, 477, 552, 736
BmrI ACTGGG 1 cut(s) 319
BmsI GCATC 1 cut(s) 589
BmuI ACTGGG 1 cut(s) 319
BpmI CTGGAG 1 cut(s) 498
BpuEI CTTGAG 2 cut(s) 397, 732
BpuMI CCSGG 2 cut(s) 74, 101
BsaAI YACGTR 2 cut(s) 52, 235
BsaHI GRCGYC 1 cut(s) 810
BsaI GGTCTC 1 cut(s) 774
BsaJI CCNNGG 7 cut(s) 67, 91, 138, 178, 550, 734, 813
BsaXI ACNNNNNCTCC 6 cut(s) 95, 125, 234, 264, 275, 305
Bsc4I CCNNNNNNNGG 8 cut(s) 73, 139, 238, 286, 361, 718, 740, 910
Bse118I RCCGGY 2 cut(s) 202, 272
Bse1I ACTGG 4 cut(s) 314, 745, 761, 958
BseBI CCWGG 5 cut(s) 140, 281, 477, 552, 736
BseDI CCNNGG 7 cut(s) 67, 91, 138, 178, 550, 734, 813
BseGI GGATG 2 cut(s) 589, 640
BseLI CCNNNNNNNGG 8 cut(s) 73, 139, 238, 286, 361, 718, 740, 910
BseMII CTCAG 2 cut(s) 419, 621
BseNI ACTGG 4 cut(s) 314, 745, 761, 958
BseSI GKGCMC 1 cut(s) 306
BseX3I CGGCCG 2 cut(s) 204, 347
BseXI GCAGC 1 cut(s) 421
Bsh1236I CGCG 2 cut(s) 180, 200
Bsh1285I CGRYCG 2 cut(s) 207, 350
BshFI GGCC 6 cut(s) 66, 72, 143, 206, 349, 914
BshNI GGYRCC 2 cut(s) 123, 809
BsiEI CGRYCG 2 cut(s) 207, 350
BsiHKAI GWGCWC 2 cut(s) 18, 108
BsiSI CCGG 6 cut(s) 74, 101, 170, 203, 273, 350
BslFI GGGAC 1 cut(s) 458
BslI CCNNNNNNNGG 8 cut(s) 73, 139, 238, 286, 361, 718, 740, 910
BsmAI GTCTC 1 cut(s) 774
BsmFI GGGAC 1 cut(s) 458
BsnI GGCC 6 cut(s) 66, 72, 143, 206, 349, 914
Bso31I GGTCTC 1 cut(s) 774
Bsp1286I GDGCHC 3 cut(s) 18, 108, 306
Bsp143I GATC 2 cut(s) 24, 244
BspACI CCGC 4 cut(s) 178, 180, 557, 834
BspANI GGCC 6 cut(s) 66, 72, 143, 206, 349, 914
BspCNI CTCAG 2 cut(s) 418, 622
BspFNI CGCG 2 cut(s) 180, 200
BspLI GGNNCC 3 cut(s) 125, 474, 811
BspT107I GGYRCC 2 cut(s) 123, 809
BspTNI GGTCTC 1 cut(s) 774
BsrFI RCCGGY 2 cut(s) 202, 272
BsrI ACTGG 4 cut(s) 314, 745, 761, 958
BssAI RCCGGY 2 cut(s) 202, 272
BssECI CCNNGG 7 cut(s) 67, 91, 138, 178, 550, 734, 813
BssMI GATC 2 cut(s) 24, 244
BssNI GRCGYC 1 cut(s) 810
BssSI CACGAG 1 cut(s) 248
BssT1I CCWWGG 2 cut(s) 67, 813
Bst2BI CACGAG 1 cut(s) 248
Bst2UI CCWGG 5 cut(s) 140, 281, 477, 552, 736
Bst6I CTCTTC 1 cut(s) 858
BstACI GRCGYC 1 cut(s) 810
BstBAI YACGTR 2 cut(s) 52, 235
BstC8I GCNNGC 2 cut(s) 204, 383
BstDEI CTNAG 2 cut(s) 405, 630
BstDSI CCRYGG 2 cut(s) 91, 178
BstEII GGTNACC 1 cut(s) 275
BstF5I GGATG 2 cut(s) 589, 640
BstFNI CGCG 2 cut(s) 180, 200
BstH2I RGCGCY 3 cut(s) 257, 747, 813
BstHHI GCGC 5 cut(s) 169, 202, 256, 746, 812
BstKTI GATC 2 cut(s) 27, 247
BstMAI GTCTC 1 cut(s) 774
BstMBI GATC 2 cut(s) 24, 244
BstMCI CGRYCG 2 cut(s) 207, 350
BstMWI GCNNNNNNNGC 4 cut(s) 225, 323, 497, 608
BstNI CCWGG 5 cut(s) 140, 281, 477, 552, 736
BstNSI RCATGY 1 cut(s) 49
BstPI GGTNACC 1 cut(s) 275
BstSCI CCNGG 7 cut(s) 72, 99, 138, 279, 475, 550, 734
BstSLI GKGCMC 1 cut(s) 306
BstUI CGCG 2 cut(s) 180, 200
BstV1I GCAGC 1 cut(s) 421
BstX2I RGATCY 1 cut(s) 244
BstYI RGATCY 1 cut(s) 244
BstZI CGGCCG 2 cut(s) 204, 347
BsuRI GGCC 6 cut(s) 66, 72, 143, 206, 349, 914
BtgI CCRYGG 2 cut(s) 91, 178
BtsCI GGATG 2 cut(s) 589, 640
BtsIMutI CAGTG 1 cut(s) 931
Cac8I GCNNGC 2 cut(s) 204, 383
CaiI CAGNNNCTG 1 cut(s) 139
CfoI GCGC 5 cut(s) 169, 202, 256, 746, 812
Cfr10I RCCGGY 2 cut(s) 202, 272
Cfr13I GGNCC 5 cut(s) 71, 79, 172, 352, 554
Cfr42I CCGCGG 1 cut(s) 181
CpoI CGGWCCG 1 cut(s) 352
CseI GACGC 2 cut(s) 206, 272
Csp6I GTAC 2 cut(s) 112, 510
CspI CGGWCCG 1 cut(s) 352
CviAII CATG 4 cut(s) 46, 117, 322, 427
CviQI GTAC 2 cut(s) 112, 510
DdeI CTNAG 2 cut(s) 405, 630
DinI GGCGCC 1 cut(s) 811
DpnI GATC 2 cut(s) 26, 246
DpnII GATC 2 cut(s) 24, 244
DraIII CACNNNGTG 1 cut(s) 238
EaeI YGGCCR 2 cut(s) 204, 347
EagI CGGCCG 2 cut(s) 204, 347
Eam1104I CTCTTC 1 cut(s) 858
EarI CTCTTC 1 cut(s) 858
Ecl136II GAGCTC 1 cut(s) 106
EclXI CGGCCG 2 cut(s) 204, 347
Eco130I CCWWGG 2 cut(s) 67, 813
Eco24I GRGCYC 1 cut(s) 108
Eco31I GGTCTC 1 cut(s) 774
Eco47I GGWCC 4 cut(s) 79, 172, 352, 554
Eco52I CGGCCG 2 cut(s) 204, 347
Eco53kI GAGCTC 1 cut(s) 106
Eco72I CACGTG 1 cut(s) 235
Eco91I GGTNACC 1 cut(s) 275
EcoICRI GAGCTC 1 cut(s) 106
EcoO65I GGTNACC 1 cut(s) 275
EcoRI GAATTC 1 cut(s) 530
EcoRII CCWGG 5 cut(s) 138, 279, 475, 550, 734
EcoT14I CCWWGG 2 cut(s) 67, 813
EcoT38I GRGCYC 1 cut(s) 108
EgeI GGCGCC 1 cut(s) 811
EheI GGCGCC 1 cut(s) 811
ErhI CCWWGG 2 cut(s) 67, 813
FaeI CATG 4 cut(s) 49, 120, 325, 430
FalI AAGNNNNNCTT 2 cut(s) 659, 691
FaqI GGGAC 1 cut(s) 458
FatI CATG 4 cut(s) 45, 116, 321, 426
FauI CCCGC 1 cut(s) 827
Fnu4HI GCNGC 2 cut(s) 181, 435
FokI GGATG 2 cut(s) 576, 647
FriOI GRGCYC 1 cut(s) 108
Fsp4HI GCNGC 2 cut(s) 181, 435
FspBI CTAG 1 cut(s) 396
GlaI GCGC 5 cut(s) 168, 201, 255, 745, 811
GluI GCNGC 2 cut(s) 181, 435
GsuI CTGGAG 1 cut(s) 498
HaeII RGCGCY 3 cut(s) 257, 747, 813
HaeIII GGCC 6 cut(s) 66, 72, 143, 206, 349, 914
HapII CCGG 6 cut(s) 74, 101, 170, 203, 273, 350
HgaI GACGC 2 cut(s) 206, 272
HhaI GCGC 5 cut(s) 169, 202, 256, 746, 812
Hin1I GRCGYC 1 cut(s) 810
Hin1II CATG 4 cut(s) 49, 120, 325, 430
Hin6I GCGC 5 cut(s) 167, 200, 254, 744, 810
HinP1I GCGC 5 cut(s) 167, 200, 254, 744, 810
HincII GTYRAC 3 cut(s) 34, 373, 643
HindII GTYRAC 3 cut(s) 34, 373, 643
HinfI GANTC 3 cut(s) 209, 357, 422
HpaI GTTAAC 1 cut(s) 643
HpaII CCGG 6 cut(s) 74, 101, 170, 203, 273, 350
HphI GGTGA 2 cut(s) 200, 287
Hpy166II GTNNAC 4 cut(s) 34, 373, 643, 929
Hpy188I TCNGA 2 cut(s) 408, 631
Hpy188III TCNNGA 6 cut(s) 133, 470, 535, 841, 938, 949
Hpy8I GTNNAC 4 cut(s) 34, 373, 643, 929
Hpy99I CGWCG 2 cut(s) 200, 217
HpyAV CCTTC 3 cut(s) 280, 664, 875
HpyCH4IV ACGT 3 cut(s) 51, 234, 539
HpyCH4V TGCA 5 cut(s) 49, 385, 462, 515, 731
HpyF10VI GCNNNNNNNGC 4 cut(s) 225, 323, 497, 608
HpyF3I CTNAG 2 cut(s) 405, 630
HpySE526I ACGT 3 cut(s) 51, 234, 539
Hsp92I GRCGYC 1 cut(s) 810
Hsp92II CATG 4 cut(s) 49, 120, 325, 430
HspAI GCGC 5 cut(s) 167, 200, 254, 744, 810
KasI GGCGCC 1 cut(s) 809
KroI GCCGGC 1 cut(s) 202
KroNI GCCGGC 1 cut(s) 204
KspAI GTTAAC 1 cut(s) 643
KspI CCGCGG 1 cut(s) 181
Kzo9I GATC 2 cut(s) 24, 244
LmnI GCTCC 3 cut(s) 103, 472, 607
Lsp1109I GCAGC 1 cut(s) 421
LweI GCATC 1 cut(s) 589
MaeI CTAG 1 cut(s) 396
MaeII ACGT 3 cut(s) 51, 234, 539
MaeIII GTNAC 2 cut(s) 188, 275
MalI GATC 2 cut(s) 26, 246
MboI GATC 2 cut(s) 24, 244
MboII GAAGA 2 cut(s) 679, 875
MflI RGATCY 1 cut(s) 244
MhlI GDGCHC 3 cut(s) 18, 108, 306
MluCI AATT 8 cut(s) 386, 504, 530, 578, 659, 715, 799, 953
Mly113I GGCGCC 1 cut(s) 810
MlyI GAGTC 2 cut(s) 203, 366
MnlI CCTC 8 cut(s) 98, 114, 154, 185, 414, 575, 625, 859
MroNI GCCGGC 1 cut(s) 202
MroXI GAANNNNTTC 3 cut(s) 290, 674, 933
MseI TTAA 4 cut(s) 42, 642, 765, 897
MslI CAYNNNNRTG 1 cut(s) 44
MspA1I CMGCKG 1 cut(s) 180
MspI CCGG 6 cut(s) 74, 101, 170, 203, 273, 350
MspR9I CCNGG 7 cut(s) 74, 101, 140, 281, 477, 552, 736
MvaI CCWGG 5 cut(s) 140, 281, 477, 552, 736
MvnI CGCG 2 cut(s) 180, 200
MwoI GCNNNNNNNGC 4 cut(s) 225, 323, 497, 608
NaeI GCCGGC 1 cut(s) 204
NarI GGCGCC 1 cut(s) 810
NciI CCSGG 2 cut(s) 74, 101
NdeII GATC 2 cut(s) 24, 244
NgoMIV GCCGGC 1 cut(s) 202
NlaIII CATG 4 cut(s) 49, 120, 325, 430
NlaIV GGNNCC 3 cut(s) 125, 474, 811
NmeAIII GCCGAG 3 cut(s) 82, 129, 517
NmuCI GTSAC 2 cut(s) 188, 275
NspI RCATGY 1 cut(s) 49
PcsI WCGNNNNNNNCGW 3 cut(s) 192, 204, 352
PdiI GCCGGC 1 cut(s) 204
PdmI GAANNNNTTC 3 cut(s) 290, 674, 933
PfeI GAWTC 1 cut(s) 422
PflFI GACNNNGTC 2 cut(s) 266, 356
PflMI CCANNNNNTGG 2 cut(s) 139, 238
PfoI TCCNGGA 1 cut(s) 99
PkrI GCNGC 2 cut(s) 182, 436
PleI GAGTC 2 cut(s) 203, 365
PluTI GGCGCC 1 cut(s) 813
PmaCI CACGTG 1 cut(s) 235
PmlI CACGTG 1 cut(s) 235
PpsI GAGTC 2 cut(s) 203, 365
Ppu21I YACGTR 2 cut(s) 52, 235
PsiI TTATAA 1 cut(s) 798
Psp124BI GAGCTC 1 cut(s) 108
Psp6I CCWGG 5 cut(s) 138, 279, 475, 550, 734
PspCI CACGTG 1 cut(s) 235
PspEI GGTNACC 1 cut(s) 275
PspGI CCWGG 5 cut(s) 138, 279, 475, 550, 734
PspN4I GGNNCC 3 cut(s) 125, 474, 811
PspPI GGNCC 5 cut(s) 71, 79, 172, 352, 554
PstNI CAGNNNCTG 1 cut(s) 139
PsuI RGATCY 1 cut(s) 244
PsyI GACNNNGTC 2 cut(s) 266, 356
RsaI GTAC 2 cut(s) 113, 511
RsaNI GTAC 2 cut(s) 112, 510
RseI CAYNNNNRTG 1 cut(s) 44
Rsr2I CGGWCCG 1 cut(s) 352
RsrII CGGWCCG 1 cut(s) 352
SacI GAGCTC 1 cut(s) 108
SacII CCGCGG 1 cut(s) 181
SaqAI TTAA 4 cut(s) 42, 642, 765, 897
SatI GCNGC 2 cut(s) 181, 435
Sau3AI GATC 2 cut(s) 24, 244
Sau96I GGNCC 5 cut(s) 71, 79, 172, 352, 554
SchI GAGTC 2 cut(s) 203, 366
ScrFI CCNGG 7 cut(s) 74, 101, 140, 281, 477, 552, 736
SduI GDGCHC 3 cut(s) 18, 108, 306
SfaNI GCATC 1 cut(s) 589
SfoI GGCGCC 1 cut(s) 811
Sfr303I CCGCGG 1 cut(s) 181
SgrAI CRCCGGYG 1 cut(s) 272
SgrBI CCGCGG 1 cut(s) 181
SinI GGWCC 4 cut(s) 79, 172, 352, 554
SmiMI CAYNNNNRTG 1 cut(s) 44
SmlI CTYRAG 2 cut(s) 376, 747
SmoI CTYRAG 2 cut(s) 376, 747
Sse9I AATT 8 cut(s) 386, 504, 530, 578, 659, 715, 799, 953
SsiI CCGC 4 cut(s) 178, 180, 557, 834
SspDI GGCGCC 1 cut(s) 809
SspMI CTAG 1 cut(s) 396
SstI GAGCTC 1 cut(s) 108
StyD4I CCNGG 7 cut(s) 72, 99, 138, 279, 475, 550, 734
StyI CCWWGG 2 cut(s) 67, 813
TaiI ACGT 3 cut(s) 54, 237, 542
TaqI TCGA 1 cut(s) 215
TaqII GACCGA 2 cut(s) 369, 726
TasI AATT 8 cut(s) 386, 504, 530, 578, 659, 715, 799, 953
TauI GCSGC 1 cut(s) 183
TfiI GAWTC 1 cut(s) 422
Tru1I TTAA 4 cut(s) 42, 642, 765, 897
Tru9I TTAA 4 cut(s) 42, 642, 765, 897
TscAI CASTG 1 cut(s) 931
TseFI GTSAC 2 cut(s) 188, 275
TseI GCWGC 1 cut(s) 434
Tsp45I GTSAC 2 cut(s) 188, 275
TspDTI ATGAA 6 cut(s) 425, 443, 760, 811, 933, 934
TspRI CASTG 1 cut(s) 931
Tth111I GACNNNGTC 2 cut(s) 266, 356
Van91I CCANNNNNTGG 2 cut(s) 139, 238
VpaK11BI GGWCC 4 cut(s) 79, 172, 352, 554
XapI RAATTY 4 cut(s) 530, 578, 659, 953
XceI RCATGY 1 cut(s) 49
XmnI GAANNNNTTC 3 cut(s) 290, 674, 933
XspI CTAG 1 cut(s) 396
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.