No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g29520 FvH4_4g29530 FvH4_4g29550 FvH4_4g29560 |
| malus_domestica | MD03G1131700.v1.1 MD03G1132100.v1.1 MD03G1132200.v1.1 MD11G1154600.v1.1 |
| prunus_persica | Prupe.1G291000_v2.0.a1 Prupe.1G296800_v2.0.a1 Prupe.1G297000_v2.0.a1 Prupe.5G145500_v2.0.a1 Prupe.5G145700_v2.0.a1 Prupe.7G054900_v2.0.a1 |
| pyrus_communis | pycom13g05150 pycom13g05180 |
| rosa_chinensis | RchiOBHm_Chr1g0340821 RchiOBHm_Chr4g0418511 |
| rosa_laevigata | RLG00000006415 RLG00000007857 RLG00000007858 RLG00000029047 |
| rosa_multiflora | Rmu_sc0000363.1_g000045 |
| rosa_roxburghii | Rroxscaffold_5G00361750 Rroxscaffold_5G00361760 Rroxscaffold_5G00361770 Rroxscaffold_5G00378890 |
| rosa_rugosa | Rorug04G0303700 |
| rosa_samantha | Rh1AG176300 Rh4AG215400 Rh4AG215500 Rh4AG356000 Rh4BG215300 Rh4BG366600 Rh4CG226700 Rh4CG226800 Rh4CG380600 Rh4DG213600 Rh4DG213800 Rh4DG361100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 8, 89 |
| AclWI | GGATC | 1 cut(s) | 247 |
| AjnI | CCWGG | 2 cut(s) | 232, 257 |
| AluBI | AGCT | 1 cut(s) | 170 |
| AluI | AGCT | 1 cut(s) | 170 |
| AlwI | GGATC | 1 cut(s) | 247 |
| Ama87I | CYCGRG | 1 cut(s) | 199 |
| AoxI | GGCC | 4 cut(s) | 66, 114, 228, 298 |
| AspS9I | GGNCC | 4 cut(s) | 66, 114, 229, 298 |
| AsuII | TTCGAA | 1 cut(s) | 270 |
| AvaI | CYCGRG | 1 cut(s) | 199 |
| AxyI | CCTNAGG | 1 cut(s) | 282 |
| BanI | GGYRCC | 2 cut(s) | 8, 89 |
| BciT130I | CCWGG | 2 cut(s) | 234, 259 |
| BfaI | CTAG | 1 cut(s) | 309 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 227 |
| BisI | GCNGC | 4 cut(s) | 52, 130, 154, 264 |
| BlsI | GCNGC | 4 cut(s) | 53, 131, 155, 265 |
| Bme1390I | CCNGG | 2 cut(s) | 234, 259 |
| BmeT110I | CYCGRG | 1 cut(s) | 199 |
| BmgT120I | GGNCC | 4 cut(s) | 66, 114, 229, 298 |
| BmiI | GGNNCC | 8 cut(s) | 10, 67, 91, 115, 139, 163, 220, 231 |
| BmrFI | CCNGG | 2 cut(s) | 234, 259 |
| BpmI | CTGGAG | 1 cut(s) | 255 |
| Bpu14I | TTCGAA | 1 cut(s) | 270 |
| BsaJI | CCNNGG | 4 cut(s) | 12, 198, 232, 258 |
| Bse21I | CCTNAGG | 1 cut(s) | 282 |
| BseBI | CCWGG | 2 cut(s) | 234, 259 |
| BseDI | CCNNGG | 4 cut(s) | 12, 198, 232, 258 |
| BseMII | CTCAG | 1 cut(s) | 296 |
| BshFI | GGCC | 4 cut(s) | 68, 116, 230, 300 |
| BshNI | GGYRCC | 2 cut(s) | 8, 89 |
| BsiHKCI | CYCGRG | 1 cut(s) | 199 |
| BsnI | GGCC | 4 cut(s) | 68, 116, 230, 300 |
| BsoBI | CYCGRG | 1 cut(s) | 199 |
| Bsp119I | TTCGAA | 1 cut(s) | 270 |
| Bsp143I | GATC | 1 cut(s) | 239 |
| BspANI | GGCC | 4 cut(s) | 68, 116, 230, 300 |
| BspCNI | CTCAG | 1 cut(s) | 295 |
| BspLI | GGNNCC | 8 cut(s) | 10, 67, 91, 115, 139, 163, 220, 231 |
| BspPI | GGATC | 1 cut(s) | 247 |
| BspT104I | TTCGAA | 1 cut(s) | 270 |
| BspT107I | GGYRCC | 2 cut(s) | 8, 89 |
| BssECI | CCNNGG | 4 cut(s) | 12, 198, 232, 258 |
| BssMI | GATC | 1 cut(s) | 239 |
| BssT1I | CCWWGG | 1 cut(s) | 12 |
| Bst2UI | CCWGG | 2 cut(s) | 234, 259 |
| BstBI | TTCGAA | 1 cut(s) | 270 |
| BstC8I | GCNNGC | 4 cut(s) | 79, 127, 151, 192 |
| BstDEI | CTNAG | 1 cut(s) | 282 |
| BstKTI | GATC | 1 cut(s) | 242 |
| BstMBI | GATC | 1 cut(s) | 239 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 74, 122, 146, 227 |
| BstNI | CCWGG | 2 cut(s) | 234, 259 |
| BstSCI | CCNGG | 2 cut(s) | 232, 257 |
| Bsu36I | CCTNAGG | 1 cut(s) | 282 |
| BsuRI | GGCC | 4 cut(s) | 68, 116, 230, 300 |
| Cac8I | GCNNGC | 4 cut(s) | 79, 127, 151, 192 |
| Cfr13I | GGNCC | 4 cut(s) | 66, 114, 229, 298 |
| CseI | GACGC | 1 cut(s) | 183 |
| CspCI | CAANNNNNGTGG | 5 cut(s) | 36, 82, 117, 154, 189 |
| CviAII | CATG | 1 cut(s) | 223 |
| DdeI | CTNAG | 1 cut(s) | 282 |
| DpnI | GATC | 1 cut(s) | 241 |
| DpnII | GATC | 1 cut(s) | 239 |
| EciI | GGCGGA | 5 cut(s) | 45, 69, 96, 147, 171 |
| Eco130I | CCWWGG | 1 cut(s) | 12 |
| Eco81I | CCTNAGG | 1 cut(s) | 282 |
| Eco88I | CYCGRG | 1 cut(s) | 199 |
| EcoO109I | RGGNCCY | 2 cut(s) | 229, 298 |
| EcoRII | CCWGG | 2 cut(s) | 232, 257 |
| EcoT14I | CCWWGG | 1 cut(s) | 12 |
| ErhI | CCWWGG | 1 cut(s) | 12 |
| FaeI | CATG | 1 cut(s) | 226 |
| FaiI | YATR | 1 cut(s) | 224 |
| FatI | CATG | 1 cut(s) | 222 |
| Fnu4HI | GCNGC | 4 cut(s) | 52, 130, 154, 264 |
| Fsp4HI | GCNGC | 4 cut(s) | 52, 130, 154, 264 |
| FspBI | CTAG | 1 cut(s) | 309 |
| GluI | GCNGC | 4 cut(s) | 52, 130, 154, 264 |
| GsuI | CTGGAG | 1 cut(s) | 255 |
| HaeIII | GGCC | 4 cut(s) | 68, 116, 230, 300 |
| HgaI | GACGC | 1 cut(s) | 183 |
| Hin1II | CATG | 1 cut(s) | 226 |
| HpyAV | CCTTC | 1 cut(s) | 220 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 74, 122, 146, 227 |
| HpyF3I | CTNAG | 1 cut(s) | 282 |
| Hsp92II | CATG | 1 cut(s) | 226 |
| Kzo9I | GATC | 1 cut(s) | 239 |
| LmnI | GCTCC | 3 cut(s) | 137, 161, 218 |
| MaeI | CTAG | 1 cut(s) | 309 |
| MalI | GATC | 1 cut(s) | 241 |
| MboI | GATC | 1 cut(s) | 239 |
| MluCI | AATT | 1 cut(s) | 252 |
| MspR9I | CCNGG | 2 cut(s) | 234, 259 |
| MvaI | CCWGG | 2 cut(s) | 234, 259 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 74, 122, 146, 227 |
| NdeII | GATC | 1 cut(s) | 239 |
| NlaIII | CATG | 1 cut(s) | 226 |
| NlaIV | GGNNCC | 8 cut(s) | 10, 67, 91, 115, 139, 163, 220, 231 |
| NspV | TTCGAA | 1 cut(s) | 270 |
| PkrI | GCNGC | 4 cut(s) | 53, 131, 155, 265 |
| Psp6I | CCWGG | 2 cut(s) | 232, 257 |
| PspGI | CCWGG | 2 cut(s) | 232, 257 |
| PspN4I | GGNNCC | 8 cut(s) | 10, 67, 91, 115, 139, 163, 220, 231 |
| PspPI | GGNCC | 4 cut(s) | 66, 114, 229, 298 |
| SatI | GCNGC | 4 cut(s) | 52, 130, 154, 264 |
| Sau3AI | GATC | 1 cut(s) | 239 |
| Sau96I | GGNCC | 4 cut(s) | 66, 114, 229, 298 |
| ScrFI | CCNGG | 2 cut(s) | 234, 259 |
| SetI | ASST | 7 cut(s) | 10, 43, 76, 91, 124, 148, 172 |
| SfuI | TTCGAA | 1 cut(s) | 270 |
| Sse9I | AATT | 1 cut(s) | 252 |
| SspMI | CTAG | 1 cut(s) | 309 |
| StyD4I | CCNGG | 2 cut(s) | 232, 257 |
| StyI | CCWWGG | 1 cut(s) | 12 |
| TaqI | TCGA | 1 cut(s) | 270 |
| TasI | AATT | 1 cut(s) | 252 |
| TauI | GCSGC | 4 cut(s) | 54, 132, 156, 266 |
| TspDTI | ATGAA | 1 cut(s) | 239 |
| XspI | CTAG | 1 cut(s) | 309 |