No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g29520 FvH4_4g29530 FvH4_4g29550 FvH4_4g29560 |
| malus_domestica | MD03G1131700.v1.1 MD03G1132100.v1.1 MD03G1132200.v1.1 MD11G1154600.v1.1 |
| prunus_persica | Prupe.1G291000_v2.0.a1 Prupe.1G296800_v2.0.a1 Prupe.1G297000_v2.0.a1 Prupe.5G145500_v2.0.a1 Prupe.5G145700_v2.0.a1 Prupe.7G054900_v2.0.a1 |
| pyrus_communis | pycom13g05150 pycom13g05180 |
| rosa_chinensis | RchiOBHm_Chr1g0340821 RchiOBHm_Chr4g0418511 |
| rosa_laevigata | RLG00000006415 RLG00000007857 RLG00000007858 RLG00000029047 |
| rosa_multiflora | Rmu_sc0000363.1_g000045 |
| rosa_roxburghii | Rroxscaffold_5G00361750 Rroxscaffold_5G00361760 Rroxscaffold_5G00361770 Rroxscaffold_5G00378890 |
| rosa_rugosa | Rorug04G0303700 |
| rosa_samantha | Rh1AG176300 Rh4AG215400 Rh4AG215500 Rh4AG356000 Rh4BG215300 Rh4BG366600 Rh4CG226700 Rh4CG226800 Rh4CG380600 Rh4DG213600 Rh4DG213800 Rh4DG361100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 77 |
| AccBSI | CCGCTC | 1 cut(s) | 180 |
| AciI | CCGC | 3 cut(s) | 36, 57, 178 |
| AfaI | GTAC | 1 cut(s) | 19 |
| AgsI | TTSAA | 1 cut(s) | 170 |
| AjnI | CCWGG | 2 cut(s) | 106, 131 |
| Ama87I | CYCGRG | 1 cut(s) | 73 |
| AoxI | GGCC | 2 cut(s) | 102, 172 |
| AspLEI | GCGC | 1 cut(s) | 122 |
| AspS9I | GGNCC | 1 cut(s) | 103 |
| AvaI | CYCGRG | 1 cut(s) | 73 |
| AxyI | CCTNAGG | 1 cut(s) | 156 |
| BanI | GGYRCC | 1 cut(s) | 77 |
| BccI | CCATC | 1 cut(s) | 36 |
| BciT130I | CCWGG | 2 cut(s) | 108, 133 |
| BfoI | RGCGCY | 1 cut(s) | 123 |
| Bme1390I | CCNGG | 2 cut(s) | 108, 133 |
| BmeT110I | CYCGRG | 1 cut(s) | 73 |
| BmgT120I | GGNCC | 1 cut(s) | 103 |
| BmiI | GGNNCC | 3 cut(s) | 79, 94, 105 |
| BmrFI | CCNGG | 2 cut(s) | 108, 133 |
| BoxI | GACNNNNGTC | 1 cut(s) | 67 |
| BpmI | CTGGAG | 1 cut(s) | 129 |
| BsaJI | CCNNGG | 3 cut(s) | 72, 106, 132 |
| Bse1I | ACTGG | 1 cut(s) | 25 |
| Bse21I | CCTNAGG | 1 cut(s) | 156 |
| BseBI | CCWGG | 2 cut(s) | 108, 133 |
| BseDI | CCNNGG | 3 cut(s) | 72, 106, 132 |
| BseGI | GGATG | 1 cut(s) | 47 |
| BseNI | ACTGG | 1 cut(s) | 25 |
| BshFI | GGCC | 2 cut(s) | 104, 174 |
| BshNI | GGYRCC | 1 cut(s) | 77 |
| BsiHKCI | CYCGRG | 1 cut(s) | 73 |
| BsnI | GGCC | 2 cut(s) | 104, 174 |
| BsoBI | CYCGRG | 1 cut(s) | 73 |
| BspACI | CCGC | 3 cut(s) | 36, 57, 178 |
| BspANI | GGCC | 2 cut(s) | 104, 174 |
| BspLI | GGNNCC | 3 cut(s) | 79, 94, 105 |
| BspT107I | GGYRCC | 1 cut(s) | 77 |
| BsrBI | CCGCTC | 1 cut(s) | 180 |
| BsrI | ACTGG | 1 cut(s) | 25 |
| BssECI | CCNNGG | 3 cut(s) | 72, 106, 132 |
| Bst2UI | CCWGG | 2 cut(s) | 108, 133 |
| BstDEI | CTNAG | 1 cut(s) | 156 |
| BstF5I | GGATG | 1 cut(s) | 47 |
| BstH2I | RGCGCY | 1 cut(s) | 123 |
| BstHHI | GCGC | 1 cut(s) | 122 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 186 |
| BstNI | CCWGG | 2 cut(s) | 108, 133 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 67 |
| BstSCI | CCNGG | 2 cut(s) | 106, 131 |
| Bsu36I | CCTNAGG | 1 cut(s) | 156 |
| BsuRI | GGCC | 2 cut(s) | 104, 174 |
| BtsCI | GGATG | 1 cut(s) | 47 |
| CfoI | GCGC | 1 cut(s) | 122 |
| Cfr13I | GGNCC | 1 cut(s) | 103 |
| Csp6I | GTAC | 1 cut(s) | 18 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 70, 105 |
| CviAII | CATG | 1 cut(s) | 97 |
| CviJI | RGCY | 3 cut(s) | 104, 162, 174 |
| CviKI_1 | RGCY | 3 cut(s) | 104, 162, 174 |
| CviQI | GTAC | 1 cut(s) | 18 |
| DdeI | CTNAG | 1 cut(s) | 156 |
| EciI | GGCGGA | 2 cut(s) | 51, 72 |
| Eco147I | AGGCCT | 1 cut(s) | 174 |
| Eco81I | CCTNAGG | 1 cut(s) | 156 |
| Eco88I | CYCGRG | 1 cut(s) | 73 |
| EcoO109I | RGGNCCY | 1 cut(s) | 103 |
| EcoRII | CCWGG | 2 cut(s) | 106, 131 |
| FaeI | CATG | 1 cut(s) | 100 |
| FaiI | YATR | 1 cut(s) | 98 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 149, 181 |
| FatI | CATG | 1 cut(s) | 96 |
| FokI | GGATG | 1 cut(s) | 54 |
| GlaI | GCGC | 1 cut(s) | 121 |
| GsuI | CTGGAG | 1 cut(s) | 129 |
| HaeII | RGCGCY | 1 cut(s) | 123 |
| HaeIII | GGCC | 2 cut(s) | 104, 174 |
| HhaI | GCGC | 1 cut(s) | 122 |
| Hin1II | CATG | 1 cut(s) | 100 |
| Hin6I | GCGC | 1 cut(s) | 120 |
| HinP1I | GCGC | 1 cut(s) | 120 |
| Hpy188III | TCNNGA | 1 cut(s) | 145 |
| HpyAV | CCTTC | 1 cut(s) | 94 |
| HpyCH4IV | ACGT | 1 cut(s) | 68 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 186 |
| HpyF3I | CTNAG | 1 cut(s) | 156 |
| HpySE526I | ACGT | 1 cut(s) | 68 |
| Hsp92II | CATG | 1 cut(s) | 100 |
| HspAI | GCGC | 1 cut(s) | 120 |
| LpnPI | CCDG | 8 cut(s) | 6, 72, 93, 102, 118, 120, 145, 168 |
| MaeII | ACGT | 1 cut(s) | 68 |
| MbiI | CCGCTC | 1 cut(s) | 180 |
| MluCI | AATT | 1 cut(s) | 82 |
| MnlI | CCTC | 6 cut(s) | 32, 53, 82, 104, 130, 185 |
| MspR9I | CCNGG | 2 cut(s) | 108, 133 |
| MvaI | CCWGG | 2 cut(s) | 108, 133 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 186 |
| NlaIII | CATG | 1 cut(s) | 100 |
| NlaIV | GGNNCC | 3 cut(s) | 79, 94, 105 |
| PceI | AGGCCT | 1 cut(s) | 174 |
| PshAI | GACNNNNGTC | 1 cut(s) | 67 |
| Psp6I | CCWGG | 2 cut(s) | 106, 131 |
| PspGI | CCWGG | 2 cut(s) | 106, 131 |
| PspN4I | GGNNCC | 3 cut(s) | 79, 94, 105 |
| PspPI | GGNCC | 1 cut(s) | 103 |
| RsaI | GTAC | 1 cut(s) | 19 |
| RsaNI | GTAC | 1 cut(s) | 18 |
| Sau96I | GGNCC | 1 cut(s) | 103 |
| ScrFI | CCNGG | 2 cut(s) | 108, 133 |
| SetI | ASST | 4 cut(s) | 10, 71, 115, 141 |
| Sse9I | AATT | 1 cut(s) | 82 |
| SseBI | AGGCCT | 1 cut(s) | 174 |
| SsiI | CCGC | 3 cut(s) | 36, 57, 178 |
| StuI | AGGCCT | 1 cut(s) | 174 |
| StyD4I | CCNGG | 2 cut(s) | 106, 131 |
| TaiI | ACGT | 1 cut(s) | 71 |
| TaqI | TCGA | 1 cut(s) | 144 |
| TasI | AATT | 1 cut(s) | 82 |
| TspDTI | ATGAA | 1 cut(s) | 113 |