Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0001775

Physical Location & Seq

Genomic Coordinates Reverse (-)

32143388 .. 32146583

Gene Structure 3196 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g34260.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1656 bp

ATGGCGGACGGTGCAGATTCCGGTGCTGTAGCTGCTGAGCTCATCAACACCAGCCCGCCGCTCGACTTTCAGTCACTTCTTTCTTCTCCGGCGAGGGACTATCTCGTCCGCAACAATGGTGATCAGGTTAAGGTTGAGACCTTGAAGGGGAAGAAGCTGGGGTTGTATTTTTCTGCATCATGGTGCGGTCCATGCCAACGTTTCACCCCGGATTTGGTGGAGACCTACAATGCGCTTGCTTCAAAGGGCGATTTCGAGGTGATATTTGTTTCAGCTGATGAGGATGAGGAGTCGTTCAATGGGTACTTCTCCAAGATGCCGTGGCTTGCTATTCCGTTTTCGGATTCTGAGGCACGGGAAAGTCTGGATGAGCAGTTCAAGGTGAGAGGGATACCGCATCTTGTGTTCCTTTGTGAAGAAGGGAGAGTTAGGAATGCCAGTGGGGTGGAGATTGTTCGGGAGTATGGAGTTGATGGCTATCCTTTTACCATAGAAAGGTTGAAAGAGTTACAAGATCAAGAAGCTGCAGCTAAAAGGGAACAGTCTCTGAAAACAGTCCTGGTCTCGCGCTCACGCGACTTTGTAATTGCATCTGGTGGGAAGAAGGTGCCTGTCTCTGAACTTGAAGGGAAGATGGTGGGTCTCTACTTCTCATTGTCTACATACAGTCCATGCATAGAATTCACTCCAAAACTTGTGGAGGTTTATGAGAAACTAAAAGCACAAGGAGAGAGTTTTGAGATTGTGTTTATATCACTTGATGATGAAGAAGAAGCATTTGAGGAAGATCTTACGAACATGCCTTGGTTTGCATTGCCCCAGAAGGACACCAAAACTACTATTGAAGAGCATGGACTTCTGGCTTACCCCTTCACACCTGAGAAGTTTGCAGAGCTGGCTGAGATAGAGAAAGCGAGAGAGAAAGCTCAAACTCTTGAGTCAATTTTGATTTCTGGGGATCAAAACTTTGTCATTGGAAAGGACGGAATCAAGATTCCGGTGTCAGATCTTGTGGGGAAGAACATCCTCCTTTATTTCTCAGCACATTGGTGTCCTCCATGCCGTGCCTTTCTACCAAGACTTATGGAAGCCTACCACAAGATCAAGGCAAAGGATGATGCATTTGAAGTTATTTTTATCTCTAGTGACAGGGACCAAGCCTCTTTTGATGACTTTTTCTCTGGAATGCCATGGCTTGCTCTCCCCTTTGGTGACTCAAGAAAGGCATCCTTGAGTCGCAGATTCAAGGTCCAAGGCATCCCCATGCTTGTAGCCATTGGTCGGGCTGGCCAAACAGTCACAAAAGAAGCTAGAGATCTCATTATGGTTCATGGAGCTGATGCTTATCCTTTCACTGAGGAGCGACTGAAAGAGATGGAAGCAGAACTTGAGGAGATGGCAAAGGGGTGGCCTCGGAAGTTGAAGAATGCACTCCATGAGGAGCATGAGCTTGTGCTCGCTCGCCGGAACAATTTCGTATGTGATGGGTGCAACGAGAAAGGAGAAACATGGTCATTCTATTGCGAGGAGTGTGACTTTGATCTGCATCCAAAATGTGCTCTGGAGGAGGAAAAGGGAACCAAAACTGATGCCAAACCAGAAGGAGAGTCCCAAGAAGGATGGGTATGTGATGGGGAAGTCTGTAAAAAAGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0001558 GO:0003006 GO:0003674 GO:0003824 GO:0004791 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006935 GO:0008150 GO:0008152 GO:0009605 GO:0009636 GO:0009653 GO:0009826 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0010035 GO:0010038 GO:0010183 GO:0010769 GO:0015036 GO:0016043 GO:0016049 GO:0016209 GO:0016491 GO:0016651 GO:0016667 GO:0016668 GO:0022414 GO:0022603 GO:0022604 GO:0030154 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0040008 GO:0040011 GO:0042221 GO:0042330 GO:0043900 GO:0044424 GO:0044444 GO:0044464 GO:0044706 GO:0045595 GO:0046686 GO:0048468 GO:0048588 GO:0048589 GO:0048638 GO:0048856 GO:0048868 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0050918 GO:0051128 GO:0051239 GO:0051510 GO:0051704 GO:0051716 GO:0055114 GO:0060284 GO:0060560 GO:0065007 GO:0070887 GO:0071840 GO:0080092 GO:0097237 GO:0098754 GO:0098869 GO:1990748 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

C1_2 Thioredoxin_8

Protein Analysis

552

Amino Acids

61.98

Weight (kDa)

4.82

Isoelectric Point (pI)

40.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Redoxin	PF08534	35 - 146	9e-10	Redoxin
AhpC-TSA	PF00578	37 - 107	1.8e-07	AhpC/TSA family
Thioredoxin_8	PF13905	50 - 143	7.5e-24	Thioredoxin-like
Thioredoxin_8	PF13905	210 - 303	2.3e-22	Thioredoxin-like
Redoxin	PF08534	358 - 470	4.7e-07	Redoxin
AhpC-TSA	PF00578	359 - 450	1.9e-08	AhpC/TSA family
Thioredoxin_8	PF13905	371 - 463	1.3e-26	Thioredoxin-like
Thioredoxin_2	PF13098	371 - 458	2.5e-06	Thioredoxin-like domain
C1_2	PF03107	510 - 552	6.1e-09	C1 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001775)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G70480 AT1G70480
fragaria_vesca	FvH4_4g34241 FvH4_4g34250 FvH4_4g34260 FvH4_4g34260 FvH4_4g34260 FvH4_4g34260
malus_domestica	MD13G1093300.v1.1 MD13G1093500.v1.1 MD16G1094500.v1.1 MD16G1094600.v1.1 MD16G1094700.v1.1
prunus_persica	Prupe.1G251900_v2.0.a1 Prupe.1G252000_v2.0.a1
pyrus_communis	pycom13g08130 pycom13g08140 pycom16g08030 pycom16g08040 pycom16g08050
rosa_chinensis	RchiOBHm_Chr4g0443711 RchiOBHm_Chr6g0250421
rosa_laevigata	RLG00000005898 RLG00000005899 RLG00000005900
rosa_multiflora	Rmu_co8463221.1_g000001 Rmu_sc0001426.1_g000010 Rmu_sc0001426.1_g000011 Rmu_sc0001426.1_g000013 Rmu_sc0008739.1_g000001
rosa_roxburghii	Rroxscaffold_5G00384250 Rroxscaffold_5G00384260 Rroxscaffold_5G00384270
rosa_rugosa	Rorug05G0496400 Rorug05G0496500
rosa_samantha	Rh4AG406400 Rh4AG406500 Rh4AG406600 Rh4BG417400 Rh4BG417500 Rh4BG417600 Rh4BG417700 Rh4CG431900 Rh4DG413000
rosa_wichuraiana	Rw4G034900 Rw4G034910 Rw4G034920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	104
AccB1I	GGYRCC	1 cut(s)	607
AccBSI	CCGCTC	1 cut(s)	61
AccI	GTMKAC	1 cut(s)	659
AccII	CGCG	2 cut(s)	568, 576
AciI	CCGC	6 cut(s)	5, 56, 59, 109, 186, 395
AclI	AACGTT	1 cut(s)	199
AclWI	GGATC	1 cut(s)	966
AcoI	YGGCCR	1 cut(s)	1288
AcsI	RAATTY	1 cut(s)	680
AfaI	GTAC	1 cut(s)	305
AfiI	CCNNNNNNNGG	4 cut(s)	147, 214, 495, 1281
AhdI	GACNNNNNGTC	1 cut(s)	70
AjnI	CCWGG	1 cut(s)	558
AleI	CACNNNNGTG	1 cut(s)	1048
AloI	GAACNNNNNNTCC	2 cut(s)	359, 391
Alw21I	GWGCWC	3 cut(s)	42, 1458, 1561
Alw26I	GTCTC	6 cut(s)	131, 215, 549, 568, 619, 647
AlwI	GGATC	1 cut(s)	966
AlwNI	CAGNNNCTG	1 cut(s)	547
AoxI	GGCC	2 cut(s)	1288, 1409
ApeKI	GCWGC	3 cut(s)	32, 524, 527
ApoI	RAATTY	1 cut(s)	680
Asp700I	GAANNNNTTC	1 cut(s)	1472
AspLEI	GCGC	2 cut(s)	235, 570
AspS9I	GGNCC	3 cut(s)	188, 1153, 1249
AsuC2I	CCSGG	1 cut(s)	209
AsuHPI	GGTGA	5 cut(s)	131, 196, 271, 394, 1223
AvaII	GGWCC	3 cut(s)	188, 1153, 1249
BalI	TGGCCA	1 cut(s)	1290
BanI	GGYRCC	1 cut(s)	607
BanII	GRGCYC	1 cut(s)	42
Bbv12I	GWGCWC	3 cut(s)	42, 1458, 1561
BbvI	GCAGC	3 cut(s)	19, 511, 539
BccI	CCATC	7 cut(s)	467, 628, 1369, 1390, 1478, 1614, 1625
BceAI	ACGGC	2 cut(s)	304, 1047
BciT130I	CCWGG	1 cut(s)	560
BciVI	GTATCC	1 cut(s)	384
BclI	TGATCA	1 cut(s)	121
BcnI	CCSGG	1 cut(s)	209
BcoDI	GTCTC	6 cut(s)	131, 215, 549, 568, 619, 647
BfaI	CTAG	2 cut(s)	1143, 1311
BfmI	CTRYAG	2 cut(s)	27, 525
BfuI	GTATCC	1 cut(s)	384
BglII	AGATCT	3 cut(s)	787, 1006, 1315
BisI	GCNGC	4 cut(s)	33, 59, 525, 528
BlpI	GCTNAGC	1 cut(s)	36
BlsI	GCNGC	4 cut(s)	34, 60, 526, 529
Bme1390I	CCNGG	2 cut(s)	209, 560
Bme18I	GGWCC	3 cut(s)	188, 1153, 1249
BmeRI	GACNNNNNGTC	1 cut(s)	70
BmgT120I	GGNCC	3 cut(s)	188, 1153, 1249
BmiI	GGNNCC	3 cut(s)	609, 1154, 1579
BmrFI	CCNGG	2 cut(s)	209, 560
BpmI	CTGGAG	1 cut(s)	1583
Bpu1102I	GCTNAGC	1 cut(s)	36
BpuEI	CTTGAG	4 cut(s)	956, 1201, 1252, 1409
BpuMI	CCSGG	1 cut(s)	209
BsaBI	GATNNNNATC	3 cut(s)	477, 1344, 1545
BsaI	GGTCTC	4 cut(s)	131, 215, 568, 647
BsaJI	CCNNGG	6 cut(s)	207, 320, 803, 1190, 1252, 1412
BsaWI	WCCGGW	2 cut(s)	20, 997
Bsc4I	CCNNNNNNNGG	4 cut(s)	147, 214, 495, 1281
Bse1I	ACTGG	1 cut(s)	438
Bse3DI	GCAATG	1 cut(s)	812
Bse8I	GATNNNNATC	3 cut(s)	477, 1344, 1545
BseBI	CCWGG	1 cut(s)	560
BseDI	CCNNGG	6 cut(s)	207, 320, 803, 1190, 1252, 1412
BseGI	GGATG	8 cut(s)	289, 373, 1023, 1120, 1226, 1257, 1546, 1625
BseJI	GATNNNNATC	3 cut(s)	477, 1344, 1545
BseLI	CCNNNNNNNGG	4 cut(s)	147, 214, 495, 1281
BseMI	GCAATG	1 cut(s)	812
BseMII	CTCAG	6 cut(s)	27, 339, 870, 891, 1053, 1347
BseNI	ACTGG	1 cut(s)	438
BseRI	GAGGAG	6 cut(s)	302, 1373, 1406, 1454, 1541, 1580
BseXI	GCAGC	3 cut(s)	19, 511, 539
BseYI	CCCAGC	1 cut(s)	157
BsgI	GTGCAG	1 cut(s)	33
Bsh1236I	CGCG	2 cut(s)	568, 576
BshFI	GGCC	2 cut(s)	1290, 1411
BshNI	GGYRCC	1 cut(s)	607
BsiHKAI	GWGCWC	3 cut(s)	42, 1458, 1561
BsiSI	CCGG	5 cut(s)	21, 89, 209, 998, 1465
BslFI	GGGAC	3 cut(s)	110, 1166, 1594
BslI	CCNNNNNNNGG	4 cut(s)	147, 214, 495, 1281
BsmAI	GTCTC	6 cut(s)	131, 215, 549, 568, 619, 647
BsmFI	GGGAC	3 cut(s)	110, 1166, 1594
BsmI	GAATGC	3 cut(s)	439, 1191, 1432
BsnI	GGCC	2 cut(s)	1290, 1411
Bso31I	GGTCTC	4 cut(s)	131, 215, 568, 647
Bsp1286I	GDGCHC	3 cut(s)	42, 1458, 1561
Bsp143I	GATC	8 cut(s)	121, 514, 787, 958, 1006, 1101, 1315, 1540
Bsp1720I	GCTNAGC	1 cut(s)	36
Bsp19I	CCATGG	1 cut(s)	1190
BspACI	CCGC	6 cut(s)	5, 56, 59, 109, 186, 395
BspANI	GGCC	2 cut(s)	1290, 1411
BspCNI	CTCAG	6 cut(s)	28, 340, 871, 892, 1052, 1348
BspFNI	CGCG	2 cut(s)	568, 576
BspLI	GGNNCC	3 cut(s)	609, 1154, 1579
BspMAI	CTGCAG	1 cut(s)	529
BspPI	GGATC	1 cut(s)	966
BspQI	GCTCTTC	1 cut(s)	840
BspT107I	GGYRCC	1 cut(s)	607
BspTNI	GGTCTC	4 cut(s)	131, 215, 568, 647
BsrBI	CCGCTC	1 cut(s)	61
BsrDI	GCAATG	1 cut(s)	812
BsrI	ACTGG	1 cut(s)	438
BssECI	CCNNGG	6 cut(s)	207, 320, 803, 1190, 1252, 1412
BssMI	GATC	8 cut(s)	121, 514, 787, 958, 1006, 1101, 1315, 1540
BssT1I	CCWWGG	3 cut(s)	803, 1190, 1252
Bst2UI	CCWGG	1 cut(s)	560
Bst4CI	ACNGT	5 cut(s)	11, 543, 556, 668, 1297
Bst6I	CTCTTC	1 cut(s)	840
BstC8I	GCNNGC	8 cut(s)	56, 237, 327, 897, 1197, 1288, 1458, 1462
BstDEI	CTNAG	6 cut(s)	36, 348, 879, 900, 1039, 1356
BstDSI	CCRYGG	2 cut(s)	320, 1190
BstF5I	GGATG	8 cut(s)	289, 373, 1023, 1120, 1226, 1257, 1546, 1625
BstFNI	CGCG	2 cut(s)	568, 576
BstHHI	GCGC	2 cut(s)	235, 570
BstKTI	GATC	8 cut(s)	124, 517, 790, 961, 1009, 1104, 1318, 1543
BstMAI	GTCTC	6 cut(s)	131, 215, 549, 568, 619, 647
BstMBI	GATC	8 cut(s)	121, 514, 787, 958, 1006, 1101, 1315, 1540
BstMWI	GCNNNNNNNGC	4 cut(s)	11, 32, 192, 896
BstNI	CCWGG	1 cut(s)	560
BstNSI	RCATGY	1 cut(s)	802
BstSCI	CCNGG	2 cut(s)	207, 558
BstSFI	CTRYAG	2 cut(s)	27, 525
BstUI	CGCG	2 cut(s)	568, 576
BstV1I	GCAGC	3 cut(s)	19, 511, 539
BstX2I	RGATCY	3 cut(s)	787, 1006, 1315
BstXI	CCANNNNNNTGG	1 cut(s)	445
BstYI	RGATCY	3 cut(s)	787, 1006, 1315
BsuI	GTATCC	1 cut(s)	384
BsuRI	GGCC	2 cut(s)	1290, 1411
BtgI	CCRYGG	2 cut(s)	320, 1190
BtsCI	GGATG	8 cut(s)	289, 373, 1023, 1120, 1226, 1257, 1546, 1625
BtsIMutI	CAGTG	2 cut(s)	445, 1353
Cac8I	GCNNGC	8 cut(s)	56, 237, 327, 897, 1197, 1288, 1458, 1462
CaiI	CAGNNNCTG	1 cut(s)	547
CfoI	GCGC	2 cut(s)	235, 570
Cfr13I	GGNCC	3 cut(s)	188, 1153, 1249
Csp6I	GTAC	1 cut(s)	304
CspCI	CAANNNNNGTGG	2 cut(s)	678, 713
CviQI	GTAC	1 cut(s)	304
DdeI	CTNAG	6 cut(s)	36, 348, 879, 900, 1039, 1356
DpnI	GATC	8 cut(s)	123, 516, 789, 960, 1008, 1103, 1317, 1542
DpnII	GATC	8 cut(s)	121, 514, 787, 958, 1006, 1101, 1315, 1540
DrdI	GACNNNNNNGTC	1 cut(s)	104
DriI	GACNNNNNGTC	1 cut(s)	70
DseDI	GACNNNNNNGTC	1 cut(s)	104
EaeI	YGGCCR	1 cut(s)	1288
Eam1104I	CTCTTC	1 cut(s)	840
Eam1105I	GACNNNNNGTC	1 cut(s)	70
EarI	CTCTTC	1 cut(s)	840
EciI	GGCGGA	1 cut(s)	20
Ecl136II	GAGCTC	1 cut(s)	40
Eco130I	CCWWGG	3 cut(s)	803, 1190, 1252
Eco24I	GRGCYC	1 cut(s)	42
Eco31I	GGTCTC	4 cut(s)	131, 215, 568, 647
Eco47I	GGWCC	3 cut(s)	188, 1153, 1249
Eco53kI	GAGCTC	1 cut(s)	40
EcoICRI	GAGCTC	1 cut(s)	40
EcoRI	GAATTC	1 cut(s)	680
EcoRII	CCWGG	1 cut(s)	558
EcoT14I	CCWWGG	3 cut(s)	803, 1190, 1252
EcoT22I	ATGCAT	2 cut(s)	677, 1123
EcoT38I	GRGCYC	1 cut(s)	42
ErhI	CCWWGG	3 cut(s)	803, 1190, 1252
FalI	AAGNNNNNCTT	4 cut(s)	1214, 1246, 1371, 1403
FaqI	GGGAC	3 cut(s)	110, 1166, 1594
FauI	CCCGC	1 cut(s)	63
FbaI	TGATCA	1 cut(s)	121
FblI	GTMKAC	1 cut(s)	659
Fnu4HI	GCNGC	4 cut(s)	33, 59, 525, 528
FokI	GGATG	8 cut(s)	296, 380, 1010, 1127, 1213, 1244, 1533, 1632
FriOI	GRGCYC	1 cut(s)	42
Fsp4HI	GCNGC	4 cut(s)	33, 59, 525, 528
FspBI	CTAG	2 cut(s)	1143, 1311
GlaI	GCGC	2 cut(s)	234, 569
GluI	GCNGC	4 cut(s)	33, 59, 525, 528
GsaI	CCCAGC	1 cut(s)	161
GsuI	CTGGAG	1 cut(s)	1583
HaeIII	GGCC	2 cut(s)	1290, 1411
HapII	CCGG	5 cut(s)	21, 89, 209, 998, 1465
HhaI	GCGC	2 cut(s)	235, 570
Hin6I	GCGC	2 cut(s)	233, 568
HinP1I	GCGC	2 cut(s)	233, 568
HindIII	AAGCTT	1 cut(s)	1650
HpaII	CCGG	5 cut(s)	21, 89, 209, 998, 1465
HphI	GGTGA	5 cut(s)	131, 196, 271, 394, 1223
Hpy166II	GTNNAC	1 cut(s)	660
Hpy188I	TCNGA	6 cut(s)	343, 349, 549, 619, 1006, 1416
Hpy188III	TCNNGA	8 cut(s)	365, 458, 518, 935, 991, 1182, 1218, 1562
Hpy8I	GTNNAC	1 cut(s)	660
HpyAV	CCTTC	8 cut(s)	139, 413, 598, 620, 817, 880, 1595, 1610
HpyCH4III	ACNGT	5 cut(s)	11, 543, 556, 668, 1297
HpyCH4IV	ACGT	1 cut(s)	199
HpyF10VI	GCNNNNNNNGC	4 cut(s)	11, 32, 192, 896
HpyF3I	CTNAG	6 cut(s)	36, 348, 879, 900, 1039, 1356
HpySE526I	ACGT	1 cut(s)	199
HspAI	GCGC	2 cut(s)	233, 568
Ksp22I	TGATCA	1 cut(s)	121
Kzo9I	GATC	8 cut(s)	121, 514, 787, 958, 1006, 1101, 1315, 1540
LguI	GCTCTTC	1 cut(s)	840
LmnI	GCTCC	3 cut(s)	1334, 1360, 1441
Lsp1109I	GCAGC	3 cut(s)	19, 511, 539
MaeI	CTAG	2 cut(s)	1143, 1311
MaeII	ACGT	1 cut(s)	199
MaeIII	GTNAC	6 cut(s)	72, 507, 1145, 1211, 1297, 1532
MalI	GATC	8 cut(s)	123, 516, 789, 960, 1008, 1103, 1317, 1542
MbiI	CCGCTC	1 cut(s)	61
MboI	GATC	8 cut(s)	121, 514, 787, 958, 1006, 1101, 1315, 1540
MflI	RGATCY	3 cut(s)	787, 1006, 1315
MhlI	GDGCHC	3 cut(s)	42, 1458, 1561
MlsI	TGGCCA	1 cut(s)	1290
MluCI	AATT	4 cut(s)	585, 680, 942, 1471
MluNI	TGGCCA	1 cut(s)	1290
MlyI	GAGTC	5 cut(s)	299, 947, 1208, 1243, 1616
Mox20I	TGGCCA	1 cut(s)	1290
Mph1103I	ATGCAT	2 cut(s)	677, 1123
MroXI	GAANNNNTTC	1 cut(s)	1472
MscI	TGGCCA	1 cut(s)	1290
MseI	TTAA	2 cut(s)	129, 1654
MslI	CAYNNNNRTG	3 cut(s)	181, 1048, 1262
Msp20I	TGGCCA	1 cut(s)	1290
MspA1I	CMGCKG	1 cut(s)	275
MspI	CCGG	5 cut(s)	21, 89, 209, 998, 1465
MspR9I	CCNGG	2 cut(s)	209, 560
Mva1269I	GAATGC	3 cut(s)	439, 1191, 1432
MvaI	CCWGG	1 cut(s)	560
MvnI	CGCG	2 cut(s)	568, 576
MwoI	GCNNNNNNNGC	4 cut(s)	11, 32, 192, 896
NciI	CCSGG	1 cut(s)	209
NcoI	CCATGG	1 cut(s)	1190
NdeII	GATC	8 cut(s)	121, 514, 787, 958, 1006, 1101, 1315, 1540
NlaIV	GGNNCC	3 cut(s)	609, 1154, 1579
NmuCI	GTSAC	5 cut(s)	72, 1145, 1211, 1297, 1532
NsiI	ATGCAT	2 cut(s)	677, 1123
NspI	RCATGY	1 cut(s)	802
OliI	CACNNNNGTG	1 cut(s)	1048
PciSI	GCTCTTC	1 cut(s)	840
PctI	GAATGC	3 cut(s)	439, 1191, 1432
PdmI	GAANNNNTTC	1 cut(s)	1472
PfeI	GAWTC	5 cut(s)	17, 344, 987, 994, 1242
PkrI	GCNGC	4 cut(s)	34, 60, 526, 529
PleI	GAGTC	5 cut(s)	298, 946, 1208, 1242, 1615
PpsI	GAGTC	5 cut(s)	298, 946, 1208, 1242, 1615
Psp124BI	GAGCTC	1 cut(s)	42
Psp1406I	AACGTT	1 cut(s)	199
Psp6I	CCWGG	1 cut(s)	558
PspFI	CCCAGC	1 cut(s)	157
PspGI	CCWGG	1 cut(s)	558
PspN4I	GGNNCC	3 cut(s)	609, 1154, 1579
PspPI	GGNCC	3 cut(s)	188, 1153, 1249
PstI	CTGCAG	1 cut(s)	529
PstNI	CAGNNNCTG	1 cut(s)	547
PsuI	RGATCY	3 cut(s)	787, 1006, 1315
PvuII	CAGCTG	1 cut(s)	275
RsaI	GTAC	1 cut(s)	305
RsaNI	GTAC	1 cut(s)	304
RseI	CAYNNNNRTG	3 cut(s)	181, 1048, 1262
SacI	GAGCTC	1 cut(s)	42
SapI	GCTCTTC	1 cut(s)	840
SaqAI	TTAA	2 cut(s)	129, 1654
SatI	GCNGC	4 cut(s)	33, 59, 525, 528
Sau3AI	GATC	8 cut(s)	121, 514, 787, 958, 1006, 1101, 1315, 1540
Sau96I	GGNCC	3 cut(s)	188, 1153, 1249
SchI	GAGTC	5 cut(s)	299, 947, 1208, 1243, 1616
ScrFI	CCNGG	2 cut(s)	209, 560
SduI	GDGCHC	3 cut(s)	42, 1458, 1561
SfcI	CTRYAG	2 cut(s)	27, 525
SinI	GGWCC	3 cut(s)	188, 1153, 1249
SmiMI	CAYNNNNRTG	3 cut(s)	181, 1048, 1262
SmlI	CTYRAG	4 cut(s)	935, 1216, 1231, 1388
SmoI	CTYRAG	4 cut(s)	935, 1216, 1231, 1388
Sse9I	AATT	4 cut(s)	585, 680, 942, 1471
SsiI	CCGC	6 cut(s)	5, 56, 59, 109, 186, 395
SspMI	CTAG	2 cut(s)	1143, 1311
SstI	GAGCTC	1 cut(s)	42
StyD4I	CCNGG	2 cut(s)	207, 558
StyI	CCWWGG	3 cut(s)	803, 1190, 1252
TaaI	ACNGT	5 cut(s)	11, 543, 556, 668, 1297
TaiI	ACGT	1 cut(s)	202
TaqI	TCGA	2 cut(s)	63, 255
TasI	AATT	4 cut(s)	585, 680, 942, 1471
TauI	GCSGC	1 cut(s)	61
TfiI	GAWTC	5 cut(s)	17, 344, 987, 994, 1242
Tru1I	TTAA	2 cut(s)	129, 1654
Tru9I	TTAA	2 cut(s)	129, 1654
TscAI	CASTG	2 cut(s)	445, 1360
TseFI	GTSAC	5 cut(s)	72, 1145, 1211, 1297, 1532
TseI	GCWGC	3 cut(s)	32, 524, 527
Tsp45I	GTSAC	5 cut(s)	72, 1145, 1211, 1297, 1532
TspDTI	ATGAA	2 cut(s)	780, 1319
TspGWI	ACGGA	2 cut(s)	324, 999
TspRI	CASTG	2 cut(s)	445, 1360
VpaK11BI	GGWCC	3 cut(s)	188, 1153, 1249
XapI	RAATTY	1 cut(s)	680
XceI	RCATGY	1 cut(s)	802
XmiI	GTMKAC	1 cut(s)	659
XmnI	GAANNNNTTC	1 cut(s)	1472
XspI	CTAG	2 cut(s)	1143, 1311
Zsp2I	ATGCAT	2 cut(s)	677, 1123

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.