Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0008739.1

Orthogroup ID

OG0001775

Physical Location & Seq

Genomic Coordinates Reverse (-)

2 .. 5731

Gene Structure 5730 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0008739.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2711 bp

atgccaaagaactttgatcatcactatgaccacctcctcatcctctctcaattctcactcttcttgctcaatcttctctcaccctcgttcgcagcgccgccgccaatcggaatctgctacggccgagtagccaacaacctccctccacccaccgtcgccgtcgacatcctcaaagccaacaacataaaacacgtccgcctcttcaatgccaaccccgccactctcagctccttctccaacaccggaatcagcgtcatgattggggtccccaacgaaatcctccccaccctcaccacagcctccgccgcagtggggtggctccaatccgacatcttctccagaattccggccaaccaagtccgctacatagccgtcggcaacgaggtcttcctcaaagaccccttctacactccccacgtggttcccgccatcctcagcctccaccaagccctccaaaccctaaatctctcgcattcaataaagctctcatcgcctcaagccgcctccgtgctatcaatctcctaccctccttcctcggcctcgttcgctcccgacctcaaaccagttctatttcttcttcttcaattcttgcgtgacacggcatctcccttcatggtgaatttgtatccctatttcagctacttgaacaaccggccctatgtctctgttgactatgctttgtttcgggatccgaaccccgtgcaagacggcgcgttggtgtacgacaacctgttcgacgcgagtgtggacgcgtttgtgagcgctttggagagggaggggtttgggggagttgaggtggtggtttcggagaccgggtggccgacgagcgccgctgagctcgtcaggactagcacgcctctcgacttcaagactcttctttcttctccggcgagggactttcttgttcgcaacaatggtgatcaggttaaggttgaaaccttgaaggggaagaagctggggttgtatttttctgcatcatggtgcggtccatgtcaacgtttcaccccagatttggtggagacctacaatgtgctcgctccaaaaggcgatttcgaggtgatctttatttcagctgatgaggatgaggagtcgttcaatgggtacttctccaagatgccgtggcttgcaattccgttttcggattctgaggcacgtgatagtctggatgagcagttcaaggtgagagggataccacatcttgtgttcctttctgaagaagggagagttgagaatgccagtggagttgagattgttcgggagtatggagctgatggctacccttttaccatagaaaggacaaaagaattacaagaacaagaagaggcagctaaaagggaacagtctctgaaaactgtcctggtctcccgttcacgcgactttgtaattgcagctgatgggaagaaggtgcctgtctctgaacttgaagggaagatggtgggtctctacttctcattgtctacattcagtccatgcatagaattcactccaaaacttgtggaggtttatgagaagctaaaagcaaagggagagagctttgagattgtgtttatatcacttgatgatgatgcagaagcatttgcacaagattgtaagaacatgccttggtttgcattgccccagaaggacaccaaaaccattgagaagttggctcggtattttgagctctccgccttacccactctggttattattggggcagatggtaaaactgtccataacaatgttgttgaagctattgacgagcatgggcttctggcttaccccttcacacctgagaaatttgcagagctcgctgagatagagaaagcgaaagagaaagcacaaactctggagtcaattttgatttctggggatcaaaactttgtcattggaaaagacggaatcaagattccggtgtcagatcttgtggggaagaacatcctcctttatttctcagcacactggtgccctccatgccgtgcctttctaccaaaacttatggaagcctatcacaagatcaaggcaaaggatgatgcatttgaagttattttcatctctagtgacagggaccaagcctctttcgatgactttttctctggaatgccatggcttgctctgccctttggtgactcaagaaaggcatccttgagtcgccgattcaaggtccaaggcatccccatgcttgtagccattggtcctactggtcaaacagtcacaaaagaagcaagagatctcgttatgcttcatggagctaatgcttatcctttcactgaggagcggctgaaagagatagaagcagaatttaaggagatggcaaagaggtggcctgagaagttgaagaatgcactccatgaggagcatgagcttgtgctctctcgccgaagaagtttcatatgtgatgggtgcaacgagaaaggagaggtgtggtcattctattgcgaggagtgtgactttgatctccatccaaagtgtgctctggaggaagaaaatggaaccaaaactgatgccaacccggaagaagatcctcatccaaagtgtgctttggaggaggagaagggaaccaaaactgatgccaagccggaagaagatccccatccaaagtgtgctttggaggaggaaaagggaaccaaaactgatgccaggccggaagagccccaagaaggatggcgtaacaaacacaatattgatatggaactagatgagcgaccaaacaacgaaaaagaaagcaaaca

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0001558 GO:0003006 GO:0003674 GO:0003824 GO:0004791 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006935 GO:0008150 GO:0008152 GO:0009605 GO:0009636 GO:0009653 GO:0009826 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0010035 GO:0010038 GO:0010183 GO:0010769 GO:0015036 GO:0016043 GO:0016049 GO:0016209 GO:0016491 GO:0016651 GO:0016667 GO:0016668 GO:0022414 GO:0022603 GO:0022604 GO:0030154 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0040008 GO:0040011 GO:0042221 GO:0042330 GO:0043900 GO:0044424 GO:0044444 GO:0044464 GO:0044706 GO:0045595 GO:0046686 GO:0048468 GO:0048588 GO:0048589 GO:0048638 GO:0048856 GO:0048868 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0050918 GO:0051128 GO:0051239 GO:0051510 GO:0051704 GO:0051716 GO:0055114 GO:0060284 GO:0060560 GO:0065007 GO:0070887 GO:0071840 GO:0080092 GO:0097237 GO:0098754 GO:0098869 GO:1990748 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

C1_2 Thioredoxin_8

Protein Analysis

903

Amino Acids

101.1

Weight (kDa)

5.03

Isoelectric Point (pI)

45.61

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001775)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G70480 AT1G70480
fragaria_vesca	FvH4_4g34241 FvH4_4g34250 FvH4_4g34260 FvH4_4g34260 FvH4_4g34260 FvH4_4g34260
malus_domestica	MD13G1093300.v1.1 MD13G1093500.v1.1 MD16G1094500.v1.1 MD16G1094600.v1.1 MD16G1094700.v1.1
prunus_persica	Prupe.1G251900_v2.0.a1 Prupe.1G252000_v2.0.a1
pyrus_communis	pycom13g08130 pycom13g08140 pycom16g08030 pycom16g08040 pycom16g08050
rosa_chinensis	RchiOBHm_Chr4g0443711 RchiOBHm_Chr6g0250421
rosa_laevigata	RLG00000005898 RLG00000005899 RLG00000005900
rosa_multiflora	Rmu_co8463221.1_g000001 Rmu_sc0001426.1_g000010 Rmu_sc0001426.1_g000011 Rmu_sc0001426.1_g000013 Rmu_sc0008739.1_g000001
rosa_roxburghii	Rroxscaffold_5G00384250 Rroxscaffold_5G00384260 Rroxscaffold_5G00384270
rosa_rugosa	Rorug05G0496400 Rorug05G0496500
rosa_samantha	Rh4AG406400 Rh4AG406500 Rh4AG406600 Rh4BG417400 Rh4BG417500 Rh4BG417600 Rh4BG417700 Rh4CG431900 Rh4DG413000
rosa_wichuraiana	Rw4G034900 Rw4G034910 Rw4G034920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	1405, 1944
AccBSI	CCGCTC	1 cut(s)	2257
AccI	GTMKAC	2 cut(s)	162, 1457
AccII	CGCG	4 cut(s)	713, 740, 752, 1374
AclI	AACGTT	1 cut(s)	997
AclWI	GGATC	5 cut(s)	683, 696, 1860, 2495, 2561
AcoI	YGGCCR	3 cut(s)	121, 348, 818
AcsI	RAATTY	5 cut(s)	342, 619, 1478, 1778, 2279
AcuI	CTGAAG	1 cut(s)	1233
AcvI	CACGTG	2 cut(s)	418, 1154
AfaI	GTAC	2 cut(s)	722, 1103
AfeI	AGCGCT	1 cut(s)	763
AfiI	CCNNNNNNNGG	7 cut(s)	107, 312, 945, 1012, 1293, 2140, 2639
AflIII	ACRYGT	2 cut(s)	190, 750
AjiI	CACGTC	1 cut(s)	193
AjnI	CCWGG	2 cut(s)	1356, 2618
AleI	CACNNNNGTG	1 cut(s)	1942
AloI	GAACNNNNNNTCC	2 cut(s)	1157, 1189
Alw21I	GWGCWC	6 cut(s)	840, 1035, 1665, 1791, 2352, 2455
Alw26I	GTCTC	7 cut(s)	667, 803, 1013, 1347, 1366, 1417, 1445
AlwI	GGATC	5 cut(s)	683, 696, 1860, 2495, 2561
AlwNI	CAGNNNCTG	1 cut(s)	1345
Aor51HI	AGCGCT	1 cut(s)	763
AoxI	GGCC	7 cut(s)	121, 348, 537, 653, 818, 2303, 2621
ApeKI	GCWGC	3 cut(s)	92, 1325, 1388
ApoI	RAATTY	5 cut(s)	342, 619, 1478, 1778, 2279
ArsI	GACNNNNNNTTYG	2 cut(s)	716, 748
AspLEI	GCGC	4 cut(s)	97, 713, 764, 830
AspS9I	GGNCC	6 cut(s)	265, 654, 986, 2047, 2143, 2174
AsuC2I	CCSGG	2 cut(s)	814, 2492
AsuHPI	GGTGA	8 cut(s)	72, 283, 628, 929, 994, 1069, 1192, 2117
AvaII	GGWCC	5 cut(s)	265, 986, 2047, 2143, 2174
BaeGI	GKGCMC	1 cut(s)	1949
BamHI	GGATCC	1 cut(s)	688
BanI	GGYRCC	2 cut(s)	1405, 1944
BanII	GRGCYC	4 cut(s)	840, 1665, 1791, 2634
BbrPI	CACGTG	2 cut(s)	418, 1154
BbsI	GAAGAC	1 cut(s)	379
Bbv12I	GWGCWC	6 cut(s)	840, 1035, 1665, 1791, 2352, 2455
BbvCI	CCTCAGC	1 cut(s)	434
BbvI	GCAGC	3 cut(s)	104, 1337, 1400
BceAI	ACGGC	7 cut(s)	136, 143, 356, 615, 724, 1102, 1941
BcgI	CGANNNNNNTGC	4 cut(s)	682, 716, 841, 875
BciT130I	CCWGG	2 cut(s)	1358, 2620
BciVI	GTATCC	2 cut(s)	636, 1182
BclI	TGATCA	2 cut(s)	16, 919
BcnI	CCSGG	2 cut(s)	814, 2492
BcoDI	GTCTC	7 cut(s)	667, 803, 1013, 1347, 1366, 1417, 1445
BfaI	CTAG	3 cut(s)	849, 2037, 2675
BfoI	RGCGCY	3 cut(s)	98, 765, 831
BfuI	GTATCC	2 cut(s)	636, 1182
BglII	AGATCT	2 cut(s)	1900, 2209
BisI	GCNGC	9 cut(s)	93, 98, 101, 306, 501, 831, 1326, 1389, 2258
BlpI	GCTNAGC	1 cut(s)	834
BlsI	GCNGC	9 cut(s)	94, 99, 102, 307, 502, 832, 1327, 1390, 2259
Bme1390I	CCNGG	4 cut(s)	814, 1358, 2492, 2620
Bme18I	GGWCC	5 cut(s)	265, 986, 2047, 2143, 2174
BmgBI	CACGTC	1 cut(s)	193
BmgT120I	GGNCC	6 cut(s)	265, 654, 986, 2047, 2143, 2174
BmrFI	CCNGG	4 cut(s)	814, 1358, 2492, 2620
BpiI	GAAGAC	1 cut(s)	379
BpmI	CTGGAG	3 cut(s)	322, 1850, 2477
Bpu10I	CCTNAGC	1 cut(s)	434
Bpu1102I	GCTNAGC	1 cut(s)	834
BpuEI	CTTGAG	3 cut(s)	480, 2095, 2146
BpuMI	CCSGG	2 cut(s)	814, 2492
BsaAI	YACGTR	2 cut(s)	418, 1154
BsaBI	GATNNNNATC	3 cut(s)	2439, 2505, 2571
BsaI	GGTCTC	4 cut(s)	803, 1013, 1366, 1445
BsaJI	CCNNGG	5 cut(s)	534, 1118, 1601, 2084, 2146
BsaWI	WCCGGW	2 cut(s)	242, 1891
BsaXI	ACNNNNNCTCC	8 cut(s)	320, 350, 589, 619, 780, 800, 810, 830
Bsc4I	CCNNNNNNNGG	7 cut(s)	107, 312, 945, 1012, 1293, 2140, 2639
Bse118I	RCCGGY	1 cut(s)	651
Bse1I	ACTGG	4 cut(s)	563, 1236, 1946, 2185
Bse3DI	GCAATG	1 cut(s)	1610
Bse8I	GATNNNNATC	3 cut(s)	2439, 2505, 2571
BseBI	CCWGG	2 cut(s)	1358, 2620
BseDI	CCNNGG	5 cut(s)	534, 1118, 1601, 2084, 2146
BseJI	GATNNNNATC	3 cut(s)	2439, 2505, 2571
BseLI	CCNNNNNNNGG	7 cut(s)	107, 312, 945, 1012, 1293, 2140, 2639
BseMI	GCAATG	1 cut(s)	1610
BseMII	CTCAG	9 cut(s)	238, 448, 825, 1137, 1764, 1785, 1947, 2241, 2298
BseNI	ACTGG	4 cut(s)	563, 1236, 1946, 2185
BseRI	GAGGAG	8 cut(s)	26, 1100, 2267, 2348, 2435, 2540, 2543, 2606
BseSI	GKGCMC	1 cut(s)	1949
BseX3I	CGGCCG	1 cut(s)	121
BseXI	GCAGC	3 cut(s)	104, 1337, 1400
BseYI	CCCAGC	1 cut(s)	955
Bsh1236I	CGCG	4 cut(s)	713, 740, 752, 1374
Bsh1285I	CGRYCG	1 cut(s)	124
BshFI	GGCC	7 cut(s)	123, 350, 539, 655, 820, 2305, 2623
BshNI	GGYRCC	2 cut(s)	1405, 1944
BsiEI	CGRYCG	1 cut(s)	124
BsiHKAI	GWGCWC	6 cut(s)	840, 1035, 1665, 1791, 2352, 2455
BsiSI	CCGG	9 cut(s)	243, 347, 652, 813, 887, 1892, 2492, 2558, 2624
BslFI	GGGAC	3 cut(s)	251, 908, 2060
BslI	CCNNNNNNNGG	7 cut(s)	107, 312, 945, 1012, 1293, 2140, 2639
BsmAI	GTCTC	7 cut(s)	667, 803, 1013, 1347, 1366, 1417, 1445
BsmFI	GGGAC	3 cut(s)	251, 908, 2060
BsmI	GAATGC	4 cut(s)	472, 1237, 2085, 2326
BsnI	GGCC	7 cut(s)	123, 350, 539, 655, 820, 2305, 2623
Bso31I	GGTCTC	4 cut(s)	803, 1013, 1366, 1445
Bsp1286I	GDGCHC	8 cut(s)	840, 1035, 1665, 1791, 1949, 2352, 2455, 2634
Bsp1720I	GCTNAGC	1 cut(s)	834
Bsp19I	CCATGG	1 cut(s)	2084
BspANI	GGCC	7 cut(s)	123, 350, 539, 655, 820, 2305, 2623
BspCNI	CTCAG	9 cut(s)	237, 447, 826, 1138, 1765, 1786, 1946, 2242, 2299
BspFNI	CGCG	4 cut(s)	713, 740, 752, 1374
BspHI	TCATGA	1 cut(s)	255
BspPI	GGATC	5 cut(s)	683, 696, 1860, 2495, 2561
BspQI	GCTCTTC	1 cut(s)	2622
BspT107I	GGYRCC	2 cut(s)	1405, 1944
BspTNI	GGTCTC	4 cut(s)	803, 1013, 1366, 1445
BsrBI	CCGCTC	1 cut(s)	2257
BsrDI	GCAATG	1 cut(s)	1610
BsrFI	RCCGGY	1 cut(s)	651
BsrI	ACTGG	4 cut(s)	563, 1236, 1946, 2185
BssAI	RCCGGY	1 cut(s)	651
BssECI	CCNNGG	5 cut(s)	534, 1118, 1601, 2084, 2146
BssT1I	CCWWGG	3 cut(s)	1601, 2084, 2146
Bst2UI	CCWGG	2 cut(s)	1358, 2620
Bst4CI	ACNGT	5 cut(s)	154, 1341, 1354, 1711, 2191
Bst6I	CTCTTC	5 cut(s)	65, 206, 879, 1314, 2622
BstBAI	YACGTR	2 cut(s)	418, 1154
BstC8I	GCNNGC	5 cut(s)	854, 1035, 1125, 1791, 2091
BstDEI	CTNAG	9 cut(s)	224, 434, 834, 1146, 1773, 1794, 1933, 2250, 2307
BstDSI	CCRYGG	2 cut(s)	1118, 2084
BstFNI	CGCG	4 cut(s)	713, 740, 752, 1374
BstH2I	RGCGCY	3 cut(s)	98, 765, 831
BstHHI	GCGC	4 cut(s)	97, 713, 764, 830
BstMAI	GTCTC	7 cut(s)	667, 803, 1013, 1347, 1366, 1417, 1445
BstMCI	CGRYCG	1 cut(s)	124
BstMWI	GCNNNNNNNGC	8 cut(s)	215, 305, 490, 545, 1790, 1953, 2095, 2629
BstNI	CCWGG	2 cut(s)	1358, 2620
BstNSI	RCATGY	1 cut(s)	1600
BstSCI	CCNGG	4 cut(s)	812, 1356, 2490, 2618
BstSLI	GKGCMC	1 cut(s)	1949
BstUI	CGCG	4 cut(s)	713, 740, 752, 1374
BstV1I	GCAGC	3 cut(s)	104, 1337, 1400
BstV2I	GAAGAC	1 cut(s)	379
BstX2I	RGATCY	5 cut(s)	688, 1900, 2209, 2500, 2566
BstYI	RGATCY	5 cut(s)	688, 1900, 2209, 2500, 2566
BstZI	CGGCCG	1 cut(s)	121
BsuI	GTATCC	2 cut(s)	636, 1182
BsuRI	GGCC	7 cut(s)	123, 350, 539, 655, 820, 2305, 2623
BtgI	CCRYGG	2 cut(s)	1118, 2084
BtgZI	GCGATG	1 cut(s)	474
BtrI	CACGTC	1 cut(s)	193
BtsI	GCAGTG	1 cut(s)	315
BtsIMutI	CAGTG	4 cut(s)	315, 1243, 1939, 2247
Cac8I	GCNNGC	5 cut(s)	854, 1035, 1125, 1791, 2091
CaiI	CAGNNNCTG	1 cut(s)	1345
CciI	TCATGA	1 cut(s)	255
CfoI	GCGC	4 cut(s)	97, 713, 764, 830
Cfr10I	RCCGGY	1 cut(s)	651
Cfr13I	GGNCC	6 cut(s)	265, 654, 986, 2047, 2143, 2174
CseI	GACGC	3 cut(s)	241, 746, 758
Csp6I	GTAC	2 cut(s)	721, 1102
CspCI	CAANNNNNGTGG	2 cut(s)	1476, 1511
CviQI	GTAC	2 cut(s)	721, 1102
DdeI	CTNAG	9 cut(s)	224, 434, 834, 1146, 1773, 1794, 1933, 2250, 2307
EaeI	YGGCCR	3 cut(s)	121, 348, 818
EagI	CGGCCG	1 cut(s)	121
Eam1104I	CTCTTC	5 cut(s)	65, 206, 879, 1314, 2622
EarI	CTCTTC	5 cut(s)	65, 206, 879, 1314, 2622
EciI	GGCGGA	3 cut(s)	185, 292, 1657
Ecl136II	GAGCTC	3 cut(s)	838, 1663, 1789
EclXI	CGGCCG	1 cut(s)	121
Eco130I	CCWWGG	3 cut(s)	1601, 2084, 2146
Eco24I	GRGCYC	4 cut(s)	840, 1665, 1791, 2634
Eco31I	GGTCTC	4 cut(s)	803, 1013, 1366, 1445
Eco47I	GGWCC	5 cut(s)	265, 986, 2047, 2143, 2174
Eco47III	AGCGCT	1 cut(s)	763
Eco52I	CGGCCG	1 cut(s)	121
Eco53kI	GAGCTC	3 cut(s)	838, 1663, 1789
Eco57I	CTGAAG	1 cut(s)	1233
Eco72I	CACGTG	2 cut(s)	418, 1154
EcoICRI	GAGCTC	3 cut(s)	838, 1663, 1789
EcoO109I	RGGNCCY	1 cut(s)	265
EcoRI	GAATTC	2 cut(s)	342, 1478
EcoRII	CCWGG	2 cut(s)	1356, 2618
EcoT14I	CCWWGG	3 cut(s)	1601, 2084, 2146
EcoT22I	ATGCAT	2 cut(s)	1475, 2017
EcoT38I	GRGCYC	4 cut(s)	840, 1665, 1791, 2634
ErhI	CCWWGG	3 cut(s)	1601, 2084, 2146
FalI	AAGNNNNNCTT	2 cut(s)	2108, 2140
FaqI	GGGAC	3 cut(s)	251, 908, 2060
FauI	CCCGC	2 cut(s)	223, 433
FauNDI	CATATG	1 cut(s)	2372
FbaI	TGATCA	2 cut(s)	16, 919
FblI	GTMKAC	2 cut(s)	162, 1457
Fnu4HI	GCNGC	9 cut(s)	93, 98, 101, 306, 501, 831, 1326, 1389, 2258
FriOI	GRGCYC	4 cut(s)	840, 1665, 1791, 2634
Fsp4HI	GCNGC	9 cut(s)	93, 98, 101, 306, 501, 831, 1326, 1389, 2258
FspBI	CTAG	3 cut(s)	849, 2037, 2675
GlaI	GCGC	4 cut(s)	96, 712, 763, 829
GluI	GCNGC	9 cut(s)	93, 98, 101, 306, 501, 831, 1326, 1389, 2258
GsaI	CCCAGC	1 cut(s)	959
GsuI	CTGGAG	3 cut(s)	322, 1850, 2477
HaeII	RGCGCY	3 cut(s)	98, 765, 831
HaeIII	GGCC	7 cut(s)	123, 350, 539, 655, 820, 2305, 2623
HapII	CCGG	9 cut(s)	243, 347, 652, 813, 887, 1892, 2492, 2558, 2624
HgaI	GACGC	3 cut(s)	241, 746, 758
HhaI	GCGC	4 cut(s)	97, 713, 764, 830
Hin6I	GCGC	4 cut(s)	95, 711, 762, 828
HinP1I	GCGC	4 cut(s)	95, 711, 762, 828
HincII	GTYRAC	3 cut(s)	163, 670, 995
HindII	GTYRAC	3 cut(s)	163, 670, 995
HpaII	CCGG	9 cut(s)	243, 347, 652, 813, 887, 1892, 2492, 2558, 2624
HphI	GGTGA	8 cut(s)	72, 283, 628, 929, 994, 1069, 1192, 2117
Hpy166II	GTNNAC	7 cut(s)	163, 670, 721, 748, 995, 1370, 1458
Hpy8I	GTNNAC	7 cut(s)	163, 670, 721, 748, 995, 1370, 1458
Hpy99I	CGWCG	5 cut(s)	158, 164, 377, 740, 826
HpyCH4III	ACNGT	5 cut(s)	154, 1341, 1354, 1711, 2191
HpyCH4IV	ACGT	4 cut(s)	192, 417, 997, 1153
HpyF10VI	GCNNNNNNNGC	8 cut(s)	215, 305, 490, 545, 1790, 1953, 2095, 2629
HpyF3I	CTNAG	9 cut(s)	224, 434, 834, 1146, 1773, 1794, 1933, 2250, 2307
HpySE526I	ACGT	4 cut(s)	192, 417, 997, 1153
HspAI	GCGC	4 cut(s)	95, 711, 762, 828
KflI	GGGWCCC	1 cut(s)	265
Ksp22I	TGATCA	2 cut(s)	16, 919
LguI	GCTCTTC	1 cut(s)	2622
LmnI	GCTCC	8 cut(s)	233, 324, 553, 1042, 1265, 2228, 2254, 2335
Lsp1109I	GCAGC	3 cut(s)	104, 1337, 1400
MaeI	CTAG	3 cut(s)	849, 2037, 2675
MaeII	ACGT	4 cut(s)	192, 417, 997, 1153
MaeIII	GTNAC	6 cut(s)	593, 2039, 2105, 2191, 2426, 2648
MbiI	CCGCTC	1 cut(s)	2257
MflI	RGATCY	5 cut(s)	688, 1900, 2209, 2500, 2566
MhlI	GDGCHC	8 cut(s)	840, 1035, 1665, 1791, 1949, 2352, 2455, 2634
MluI	ACGCGT	1 cut(s)	750
MlyI	GAGTC	5 cut(s)	865, 1097, 1841, 2102, 2137
MmeI	TCCRAC	2 cut(s)	261, 351
Mph1103I	ATGCAT	2 cut(s)	1475, 2017
MseI	TTAA	2 cut(s)	927, 2283
MslI	CAYNNNNRTG	5 cut(s)	24, 979, 1719, 1942, 2156
MspA1I	CMGCKG	3 cut(s)	833, 1073, 1391
MspI	CCGG	9 cut(s)	243, 347, 652, 813, 887, 1892, 2492, 2558, 2624
MspR9I	CCNGG	4 cut(s)	814, 1358, 2492, 2620
Mva1269I	GAATGC	4 cut(s)	472, 1237, 2085, 2326
MvaI	CCWGG	2 cut(s)	1358, 2620
MvnI	CGCG	4 cut(s)	713, 740, 752, 1374
MwoI	GCNNNNNNNGC	8 cut(s)	215, 305, 490, 545, 1790, 1953, 2095, 2629
NciI	CCSGG	2 cut(s)	814, 2492
NcoI	CCATGG	1 cut(s)	2084
NdeI	CATATG	1 cut(s)	2372
NmeAIII	GCCGAG	2 cut(s)	149, 515
NmuCI	GTSAC	5 cut(s)	593, 2039, 2105, 2191, 2426
NsiI	ATGCAT	2 cut(s)	1475, 2017
NspI	RCATGY	1 cut(s)	1600
OliI	CACNNNNGTG	1 cut(s)	1942
PagI	TCATGA	1 cut(s)	255
PciSI	GCTCTTC	1 cut(s)	2622
PctI	GAATGC	4 cut(s)	472, 1237, 2085, 2326
PfeI	GAWTC	6 cut(s)	111, 246, 1142, 1881, 1888, 2136
PkrI	GCNGC	9 cut(s)	94, 99, 102, 307, 502, 832, 1327, 1390, 2259
PleI	GAGTC	5 cut(s)	865, 1096, 1840, 2102, 2136
PmaCI	CACGTG	2 cut(s)	418, 1154
PmlI	CACGTG	2 cut(s)	418, 1154
PpsI	GAGTC	5 cut(s)	865, 1096, 1840, 2102, 2136
Ppu21I	YACGTR	2 cut(s)	418, 1154
PpuMI	RGGWCCY	1 cut(s)	265
Psp124BI	GAGCTC	3 cut(s)	840, 1665, 1791
Psp1406I	AACGTT	1 cut(s)	997
Psp5II	RGGWCCY	1 cut(s)	265
Psp6I	CCWGG	2 cut(s)	1356, 2618
PspCI	CACGTG	2 cut(s)	418, 1154
PspFI	CCCAGC	1 cut(s)	955
PspGI	CCWGG	2 cut(s)	1356, 2618
PspPI	GGNCC	6 cut(s)	265, 654, 986, 2047, 2143, 2174
PspPPI	RGGWCCY	1 cut(s)	265
PstNI	CAGNNNCTG	1 cut(s)	1345
PsuI	RGATCY	5 cut(s)	688, 1900, 2209, 2500, 2566
PvuII	CAGCTG	2 cut(s)	1073, 1391
RsaI	GTAC	2 cut(s)	722, 1103
RsaNI	GTAC	2 cut(s)	721, 1102
RseI	CAYNNNNRTG	5 cut(s)	24, 979, 1719, 1942, 2156
SacI	GAGCTC	3 cut(s)	840, 1665, 1791
SalI	GTCGAC	1 cut(s)	161
SapI	GCTCTTC	1 cut(s)	2622
SaqAI	TTAA	2 cut(s)	927, 2283
SatI	GCNGC	9 cut(s)	93, 98, 101, 306, 501, 831, 1326, 1389, 2258
Sau96I	GGNCC	6 cut(s)	265, 654, 986, 2047, 2143, 2174
SchI	GAGTC	5 cut(s)	865, 1097, 1841, 2102, 2137
ScrFI	CCNGG	4 cut(s)	814, 1358, 2492, 2620
SduI	GDGCHC	8 cut(s)	840, 1035, 1665, 1791, 1949, 2352, 2455, 2634
SinI	GGWCC	5 cut(s)	265, 986, 2047, 2143, 2174
SmiMI	CAYNNNNRTG	5 cut(s)	24, 979, 1719, 1942, 2156
SmlI	CTYRAG	3 cut(s)	495, 2110, 2125
SmoI	CTYRAG	3 cut(s)	495, 2110, 2125
SspI	AATATT	1 cut(s)	2662
SspMI	CTAG	3 cut(s)	849, 2037, 2675
SstI	GAGCTC	3 cut(s)	840, 1665, 1791
StyD4I	CCNGG	4 cut(s)	812, 1356, 2490, 2618
StyI	CCWWGG	3 cut(s)	1601, 2084, 2146
TaaI	ACNGT	5 cut(s)	154, 1341, 1354, 1711, 2191
TaiI	ACGT	4 cut(s)	195, 420, 1000, 1156
TaqI	TCGA	5 cut(s)	162, 735, 861, 1053, 2061
TauI	GCSGC	6 cut(s)	100, 103, 308, 503, 833, 2260
TfiI	GAWTC	6 cut(s)	111, 246, 1142, 1881, 1888, 2136
Tru1I	TTAA	2 cut(s)	927, 2283
Tru9I	TTAA	2 cut(s)	927, 2283
TscAI	CASTG	4 cut(s)	315, 1243, 1946, 2254
TseFI	GTSAC	5 cut(s)	593, 2039, 2105, 2191, 2426
TseI	GCWGC	3 cut(s)	92, 1325, 1388
Tsp45I	GTSAC	5 cut(s)	593, 2039, 2105, 2191, 2426
TspDTI	ATGAA	4 cut(s)	601, 2020, 2213, 2359
TspGWI	ACGGA	3 cut(s)	496, 1122, 1893
TspRI	CASTG	4 cut(s)	315, 1243, 1946, 2254
VpaK11BI	GGWCC	5 cut(s)	265, 986, 2047, 2143, 2174
XapI	RAATTY	5 cut(s)	342, 619, 1478, 1778, 2279
XceI	RCATGY	1 cut(s)	1600
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1642
XmiI	GTMKAC	2 cut(s)	162, 1457
XspI	CTAG	3 cut(s)	849, 2037, 2675
Zsp2I	ATGCAT	2 cut(s)	1475, 2017

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.