Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0001775

Physical Location & Seq

Genomic Coordinates Forward (+)

5923897 .. 5927105

Gene Structure 3209 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ22447

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1815 bp

ATGGCGGACGGTGAAGATTCCGGTGCTGTAGCCGCTGAGCTCATCAGGACTAGCACGCCCCTCGACTTCAAGACTCTTCTTTCTTCTCCGGTGAGGGACTTTCTTGTTCGCAACAATGGTGATCAGGTTAAGGTTGAAACCTTGAAGGGGAAGAAGCTGGGGTTGTATTATTCTGCATCATGGGACCGACGATGTCAACGTTTCACCCCAGATTTGGTGGAGACCTACAATGCACTCGCTCCAAAAGGCGATTTCGAGGTGATCTTTATTTCAGCTGATGAGGATGAGGAGTCGTTCAATGGGTACTTCTCCAAGATGCCGTGGCTTGCAATTCCATTTTCGGATTCTGAGGCACGTGATAGTCTGGATGAGCAGTTCAAGGTGAGAGGGATACCGCATCTTGTGTTCCTTTGTGAAGAAGGGAGAGTTAGGAATGTCAGTGGAGTTGAGATTGTTCGGGAGTATGGAGCCGATGGCTACCCTTTTACCATAGAAAGGTTAAAAGAATTAAAAGAACAAGAAGAGGCAGCTAACAGGGAACAGTCTCTGAAAACAGTCCTGGTCTCCCGTTCACGCGACTTTGTAATTGCATCTGATGGGAAGAAGGTGCCTGTCTCTGAACTTGAAGGGAAGATGGTGGGTCTCTACTTCTCATTGTCTACATTCAGTCCATGCATAGAATTCACTCCAAAACTTGTGGAGGTTTATGAGAAGATAAAAGCAAAGGGTGAGAGCTTTGAGATTGTGTTTTTATCACTTGATGATGATGAAGAAGCATTTGAACAAGATTGTAAGAACATGCCTTGGTTTGCATTGCCCCAGAAGGACACCAAAACCATTGAGAAATTGGCTCGGTATTTTGAGCTGTCAACCTTACCCACTTTGGTTATTATTGGGGCAGATGGTAAAACTGTCCATAACAATGTTGTTGAAGCAATTGACGAGCATGGGCTTCTGGCTTACCCCTTCACACCTGAGAAGTTTGCAGAGCTCGCTGAGATAGAGAAAGCGAAAGAGAAAGCACAAACTCTGGAGTCAATTTTGATTTCTGGGGATCAAAACTTTGTCATTGGAAAAGACGGAATCAAGATTTCGGTGTCAGATCTTGTGGGGAAGAACATCCTCCTTTATTTCTCAGCACATTGGTGCCCTCCAGACCGTGCCTTTCTACCAAAACTTATGGAAGCCTATCACAAGATCAAGGCAAAGGGTGATGCGTTTGAAGTTATTTTCATCTCTAGTGACAGGGACCAGGCCTCTTTCGATGACTTTTTCTCTGGAATGCCATGGCATGCTCTTCCCTTTGGTGACTCAAGAAAGGCATCCTTGAGTCGCCGATTCAAGATCCAAGGCATCCCGATGCTTGTAGCCATTGGTCCTACTGGTCAAACAGTCACAAAAGAAGCAAGCGATCTAGTTAGGCTTCATGGAGCTAATGCTTATCCTTTCACTGAGGAGCGGTTGAAAGAGATAGAAGCAGAATTTGAGGAGATGGCAAAGAGGTGGCCTAAGAAGTTGAAGAATGCACTCCATGAGGAGCATGAGCTTGTGCTCGCTCGCCGAAGAAATTTCATATGTGATGGGTGCAACGAGAAAGGAGAGGTGTGGTCATTCTATTGCGAGGAGTGTGACTTTGATCTCCATCCAAAGTGTGCTCTGGAGGAGGAAAAGGGACCCAAAACTGATGCCAACCCAGAAGATCCCCATCCAAAGTGTGCTTTGGAGGAGGAAAAGGGAACCAAAACTGATGCCAAGCCGGAAGAAGAGCCCCAAGAAGGATGGGTATGCGATGGTGAAGTTTGTAAAAAAACTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0001558 GO:0003006 GO:0003674 GO:0003824 GO:0004791 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006935 GO:0008150 GO:0008152 GO:0009605 GO:0009636 GO:0009653 GO:0009826 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0010035 GO:0010038 GO:0010183 GO:0010769 GO:0015036 GO:0016043 GO:0016049 GO:0016209 GO:0016491 GO:0016651 GO:0016667 GO:0016668 GO:0022414 GO:0022603 GO:0022604 GO:0030154 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0040008 GO:0040011 GO:0042221 GO:0042330 GO:0043900 GO:0044424 GO:0044444 GO:0044464 GO:0044706 GO:0045595 GO:0046686 GO:0048468 GO:0048588 GO:0048589 GO:0048638 GO:0048856 GO:0048868 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0050918 GO:0051128 GO:0051239 GO:0051510 GO:0051704 GO:0051716 GO:0055114 GO:0060284 GO:0060560 GO:0065007 GO:0070887 GO:0071840 GO:0080092 GO:0097237 GO:0098754 GO:0098869 GO:1990748 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

C1_2 Thioredoxin_8

Protein Analysis

604

Amino Acids

68.28

Weight (kDa)

4.96

Isoelectric Point (pI)

42.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Thioredoxin_8	PF13905	50 - 143	2.5e-21	Thioredoxin-like
Thioredoxin_8	PF13905	210 - 303	3.3e-22	Thioredoxin-like
AhpC-TSA	PF00578	359 - 424	3.5e-06	AhpC/TSA family
Thioredoxin_8	PF13905	371 - 463	4.1e-24	Thioredoxin-like
C1_2	PF03107	510 - 552	1.7e-08	C1 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001775)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G70480 AT1G70480
fragaria_vesca	FvH4_4g34241 FvH4_4g34250 FvH4_4g34260 FvH4_4g34260 FvH4_4g34260 FvH4_4g34260
malus_domestica	MD13G1093300.v1.1 MD13G1093500.v1.1 MD16G1094500.v1.1 MD16G1094600.v1.1 MD16G1094700.v1.1
prunus_persica	Prupe.1G251900_v2.0.a1 Prupe.1G252000_v2.0.a1
pyrus_communis	pycom13g08130 pycom13g08140 pycom16g08030 pycom16g08040 pycom16g08050
rosa_chinensis	RchiOBHm_Chr4g0443711 RchiOBHm_Chr6g0250421
rosa_laevigata	RLG00000005898 RLG00000005899 RLG00000005900
rosa_multiflora	Rmu_co8463221.1_g000001 Rmu_sc0001426.1_g000010 Rmu_sc0001426.1_g000011 Rmu_sc0001426.1_g000013 Rmu_sc0008739.1_g000001
rosa_roxburghii	Rroxscaffold_5G00384250 Rroxscaffold_5G00384260 Rroxscaffold_5G00384270
rosa_rugosa	Rorug05G0496400 Rorug05G0496500
rosa_samantha	Rh4AG406400 Rh4AG406500 Rh4AG406600 Rh4BG417400 Rh4BG417500 Rh4BG417600 Rh4BG417700 Rh4CG431900 Rh4DG413000
rosa_wichuraiana	Rw4G034900 Rw4G034910 Rw4G034920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	607, 1146
AccBSI	CCGCTC	1 cut(s)	1459
AccI	GTMKAC	1 cut(s)	659
AccII	CGCG	1 cut(s)	576
AciI	CCGC	4 cut(s)	5, 33, 395, 1459
AclI	AACGTT	1 cut(s)	199
AclWI	GGATC	3 cut(s)	1062, 1339, 1694
AcsI	RAATTY	3 cut(s)	680, 1481, 1567
AcvI	CACGTG	1 cut(s)	356
AfaI	GTAC	1 cut(s)	305
AfiI	CCNNNNNNNGG	4 cut(s)	147, 214, 495, 1775
AjnI	CCWGG	2 cut(s)	558, 1251
AleI	CACNNNNGTG	1 cut(s)	1144
AloI	GAACNNNNNNTCC	2 cut(s)	359, 391
AluBI	AGCT	9 cut(s)	40, 157, 275, 530, 735, 865, 991, 1433, 1546
AluI	AGCT	9 cut(s)	40, 157, 275, 530, 735, 865, 991, 1433, 1546
Alw21I	GWGCWC	4 cut(s)	42, 993, 1554, 1657
Alw26I	GTCTC	5 cut(s)	215, 549, 568, 619, 647
AlwI	GGATC	3 cut(s)	1062, 1339, 1694
AlwNI	CAGNNNCTG	1 cut(s)	547
AoxI	GGCC	2 cut(s)	1254, 1505
ApeKI	GCWGC	1 cut(s)	527
ApoI	RAATTY	3 cut(s)	680, 1481, 1567
AspS9I	GGNCC	4 cut(s)	184, 1249, 1376, 1673
AvaII	GGWCC	4 cut(s)	184, 1249, 1376, 1673
BaeGI	GKGCMC	1 cut(s)	1151
BanI	GGYRCC	2 cut(s)	607, 1146
BanII	GRGCYC	3 cut(s)	42, 993, 1770
BbrPI	CACGTG	1 cut(s)	356
Bbv12I	GWGCWC	4 cut(s)	42, 993, 1554, 1657
BbvI	GCAGC	1 cut(s)	539
BceAI	ACGGC	1 cut(s)	304
BcgI	CGANNNNNNTGC	2 cut(s)	43, 77
BciT130I	CCWGG	2 cut(s)	560, 1253
BciVI	GTATCC	1 cut(s)	384
BclI	TGATCA	1 cut(s)	121
BcoDI	GTCTC	5 cut(s)	215, 549, 568, 619, 647
BfaI	CTAG	3 cut(s)	51, 1239, 1415
BfmI	CTRYAG	1 cut(s)	27
BfuI	GTATCC	1 cut(s)	384
BglII	AGATCT	1 cut(s)	1102
BisI	GCNGC	2 cut(s)	33, 528
BlpI	GCTNAGC	1 cut(s)	36
BlsI	GCNGC	2 cut(s)	34, 529
Bme1390I	CCNGG	2 cut(s)	560, 1253
Bme18I	GGWCC	4 cut(s)	184, 1249, 1376, 1673
BmgT120I	GGNCC	4 cut(s)	184, 1249, 1376, 1673
BmiI	GGNNCC	8 cut(s)	185, 469, 609, 1148, 1250, 1674, 1675, 1738
BmrFI	CCNGG	2 cut(s)	560, 1253
BpmI	CTGGAG	3 cut(s)	1052, 1137, 1679
Bpu1102I	GCTNAGC	1 cut(s)	36
BpuEI	CTTGAG	2 cut(s)	1297, 1348
BsaAI	YACGTR	1 cut(s)	356
BsaBI	GATNNNNATC	2 cut(s)	1641, 1704
BsaI	GGTCTC	3 cut(s)	215, 568, 647
BsaJI	CCNNGG	4 cut(s)	320, 803, 1286, 1348
BsaWI	WCCGGW	2 cut(s)	20, 88
Bsc4I	CCNNNNNNNGG	4 cut(s)	147, 214, 495, 1775
Bse1I	ACTGG	1 cut(s)	1387
Bse3DI	GCAATG	1 cut(s)	812
Bse8I	GATNNNNATC	2 cut(s)	1641, 1704
BseBI	CCWGG	2 cut(s)	560, 1253
BseDI	CCNNGG	4 cut(s)	320, 803, 1286, 1348
BseGI	GGATG	8 cut(s)	289, 373, 1119, 1322, 1353, 1642, 1705, 1784
BseJI	GATNNNNATC	2 cut(s)	1641, 1704
BseLI	CCNNNNNNNGG	4 cut(s)	147, 214, 495, 1775
BseMI	GCAATG	1 cut(s)	812
BseMII	CTCAG	6 cut(s)	27, 339, 966, 987, 1149, 1443
BseNI	ACTGG	1 cut(s)	1387
BseRI	GAGGAG	7 cut(s)	302, 1469, 1502, 1550, 1637, 1676, 1739
BseSI	GKGCMC	1 cut(s)	1151
BseXI	GCAGC	1 cut(s)	539
BseYI	CCCAGC	1 cut(s)	157
Bsh1236I	CGCG	1 cut(s)	576
BshFI	GGCC	2 cut(s)	1256, 1507
BshNI	GGYRCC	2 cut(s)	607, 1146
BsiHKAI	GWGCWC	4 cut(s)	42, 993, 1554, 1657
BsiSI	CCGG	3 cut(s)	21, 89, 1757
BslFI	GGGAC	4 cut(s)	110, 197, 1262, 1686
BslI	CCNNNNNNNGG	4 cut(s)	147, 214, 495, 1775
BsmAI	GTCTC	5 cut(s)	215, 549, 568, 619, 647
BsmFI	GGGAC	4 cut(s)	110, 197, 1262, 1686
BsmI	GAATGC	2 cut(s)	1287, 1528
BsnI	GGCC	2 cut(s)	1256, 1507
Bso31I	GGTCTC	3 cut(s)	215, 568, 647
Bsp1286I	GDGCHC	6 cut(s)	42, 993, 1151, 1554, 1657, 1770
Bsp143I	GATC	9 cut(s)	121, 261, 1054, 1102, 1197, 1344, 1411, 1636, 1699
Bsp1720I	GCTNAGC	1 cut(s)	36
Bsp19I	CCATGG	1 cut(s)	1286
BspACI	CCGC	4 cut(s)	5, 33, 395, 1459
BspANI	GGCC	2 cut(s)	1256, 1507
BspCNI	CTCAG	6 cut(s)	28, 340, 967, 988, 1148, 1444
BspFNI	CGCG	1 cut(s)	576
BspLI	GGNNCC	8 cut(s)	185, 469, 609, 1148, 1250, 1674, 1675, 1738
BspPI	GGATC	3 cut(s)	1062, 1339, 1694
BspQI	GCTCTTC	2 cut(s)	1302, 1758
BspT107I	GGYRCC	2 cut(s)	607, 1146
BspTNI	GGTCTC	3 cut(s)	215, 568, 647
BsrBI	CCGCTC	1 cut(s)	1459
BsrDI	GCAATG	1 cut(s)	812
BsrI	ACTGG	1 cut(s)	1387
BssECI	CCNNGG	4 cut(s)	320, 803, 1286, 1348
BssMI	GATC	9 cut(s)	121, 261, 1054, 1102, 1197, 1344, 1411, 1636, 1699
BssT1I	CCWWGG	3 cut(s)	803, 1286, 1348
Bst2UI	CCWGG	2 cut(s)	560, 1253
Bst4CI	ACNGT	6 cut(s)	11, 543, 556, 913, 1160, 1393
Bst6I	CTCTTC	4 cut(s)	81, 516, 1302, 1758
BstBAI	YACGTR	1 cut(s)	356
BstC8I	GCNNGC	7 cut(s)	56, 327, 993, 1293, 1408, 1554, 1558
BstDEI	CTNAG	7 cut(s)	36, 348, 975, 996, 1135, 1452, 1509
BstDSI	CCRYGG	2 cut(s)	320, 1286
BstF5I	GGATG	8 cut(s)	289, 373, 1119, 1322, 1353, 1642, 1705, 1784
BstFNI	CGCG	1 cut(s)	576
BstKTI	GATC	9 cut(s)	124, 264, 1057, 1105, 1200, 1347, 1414, 1639, 1702
BstMAI	GTCTC	5 cut(s)	215, 549, 568, 619, 647
BstMBI	GATC	9 cut(s)	121, 261, 1054, 1102, 1197, 1344, 1411, 1636, 1699
BstMWI	GCNNNNNNNGC	2 cut(s)	32, 992
BstNI	CCWGG	2 cut(s)	560, 1253
BstNSI	RCATGY	2 cut(s)	802, 1295
BstSCI	CCNGG	2 cut(s)	558, 1251
BstSFI	CTRYAG	1 cut(s)	27
BstSLI	GKGCMC	1 cut(s)	1151
BstUI	CGCG	1 cut(s)	576
BstV1I	GCAGC	1 cut(s)	539
BstX2I	RGATCY	3 cut(s)	1102, 1344, 1699
BstYI	RGATCY	3 cut(s)	1102, 1344, 1699
BsuI	GTATCC	1 cut(s)	384
BsuRI	GGCC	2 cut(s)	1256, 1507
BtgI	CCRYGG	2 cut(s)	320, 1286
BtgZI	GCGATG	1 cut(s)	1803
BtsCI	GGATG	8 cut(s)	289, 373, 1119, 1322, 1353, 1642, 1705, 1784
BtsIMutI	CAGTG	2 cut(s)	445, 1449
Cac8I	GCNNGC	7 cut(s)	56, 327, 993, 1293, 1408, 1554, 1558
CaiI	CAGNNNCTG	1 cut(s)	547
Cfr13I	GGNCC	4 cut(s)	184, 1249, 1376, 1673
Csp6I	GTAC	1 cut(s)	304
CspCI	CAANNNNNGTGG	2 cut(s)	678, 713
CviAII	CATG	9 cut(s)	180, 672, 799, 947, 1287, 1292, 1427, 1532, 1541
CviQI	GTAC	1 cut(s)	304
DdeI	CTNAG	7 cut(s)	36, 348, 975, 996, 1135, 1452, 1509
DpnI	GATC	9 cut(s)	123, 263, 1056, 1104, 1199, 1346, 1413, 1638, 1701
DpnII	GATC	9 cut(s)	121, 261, 1054, 1102, 1197, 1344, 1411, 1636, 1699
Eam1104I	CTCTTC	4 cut(s)	81, 516, 1302, 1758
EarI	CTCTTC	4 cut(s)	81, 516, 1302, 1758
EciI	GGCGGA	1 cut(s)	20
Ecl136II	GAGCTC	2 cut(s)	40, 991
Eco130I	CCWWGG	3 cut(s)	803, 1286, 1348
Eco147I	AGGCCT	1 cut(s)	1256
Eco24I	GRGCYC	3 cut(s)	42, 993, 1770
Eco31I	GGTCTC	3 cut(s)	215, 568, 647
Eco47I	GGWCC	4 cut(s)	184, 1249, 1376, 1673
Eco53kI	GAGCTC	2 cut(s)	40, 991
Eco72I	CACGTG	1 cut(s)	356
EcoICRI	GAGCTC	2 cut(s)	40, 991
EcoO109I	RGGNCCY	1 cut(s)	1673
EcoRI	GAATTC	1 cut(s)	680
EcoRII	CCWGG	2 cut(s)	558, 1251
EcoT14I	CCWWGG	3 cut(s)	803, 1286, 1348
EcoT22I	ATGCAT	1 cut(s)	677
EcoT38I	GRGCYC	3 cut(s)	42, 993, 1770
ErhI	CCWWGG	3 cut(s)	803, 1286, 1348
FaeI	CATG	9 cut(s)	183, 675, 802, 950, 1290, 1295, 1430, 1535, 1544
FalI	AAGNNNNNCTT	2 cut(s)	1310, 1342
FaqI	GGGAC	4 cut(s)	110, 197, 1262, 1686
FatI	CATG	9 cut(s)	179, 671, 798, 946, 1286, 1291, 1426, 1531, 1540
FauNDI	CATATG	1 cut(s)	1574
FbaI	TGATCA	1 cut(s)	121
FblI	GTMKAC	1 cut(s)	659
Fnu4HI	GCNGC	2 cut(s)	33, 528
FokI	GGATG	8 cut(s)	296, 380, 1106, 1309, 1340, 1629, 1692, 1791
FriOI	GRGCYC	3 cut(s)	42, 993, 1770
Fsp4HI	GCNGC	2 cut(s)	33, 528
FspBI	CTAG	3 cut(s)	51, 1239, 1415
GluI	GCNGC	2 cut(s)	33, 528
GsaI	CCCAGC	1 cut(s)	161
GsuI	CTGGAG	3 cut(s)	1052, 1137, 1679
HaeIII	GGCC	2 cut(s)	1256, 1507
HapII	CCGG	3 cut(s)	21, 89, 1757
Hin1II	CATG	9 cut(s)	183, 675, 802, 950, 1290, 1295, 1430, 1535, 1544
HincII	GTYRAC	2 cut(s)	197, 870
HindII	GTYRAC	2 cut(s)	197, 870
HinfI	GANTC	9 cut(s)	17, 73, 290, 344, 1034, 1083, 1310, 1330, 1338
HpaII	CCGG	3 cut(s)	21, 89, 1757
Hpy166II	GTNNAC	4 cut(s)	197, 572, 660, 870
Hpy188I	TCNGA	6 cut(s)	343, 349, 549, 595, 619, 1102
Hpy8I	GTNNAC	4 cut(s)	197, 572, 660, 870
Hpy99I	CGWCG	1 cut(s)	192
HpyAV	CCTTC	7 cut(s)	139, 413, 598, 620, 817, 976, 1769
HpyCH4III	ACNGT	6 cut(s)	11, 543, 556, 913, 1160, 1393
HpyCH4IV	ACGT	2 cut(s)	199, 355
HpyCH4V	TGCA	9 cut(s)	176, 233, 329, 590, 675, 812, 986, 1526, 1587
HpyF10VI	GCNNNNNNNGC	2 cut(s)	32, 992
HpyF3I	CTNAG	7 cut(s)	36, 348, 975, 996, 1135, 1452, 1509
HpySE526I	ACGT	2 cut(s)	199, 355
Hsp92II	CATG	9 cut(s)	183, 675, 802, 950, 1290, 1295, 1430, 1535, 1544
KflI	GGGWCCC	1 cut(s)	1673
Ksp22I	TGATCA	1 cut(s)	121
Kzo9I	GATC	9 cut(s)	121, 261, 1054, 1102, 1197, 1344, 1411, 1636, 1699
LguI	GCTCTTC	2 cut(s)	1302, 1758
LmnI	GCTCC	5 cut(s)	244, 467, 1430, 1456, 1537
Lsp1109I	GCAGC	1 cut(s)	539
MaeI	CTAG	3 cut(s)	51, 1239, 1415
MaeII	ACGT	2 cut(s)	199, 355
MaeIII	GTNAC	4 cut(s)	1241, 1307, 1393, 1628
MalI	GATC	9 cut(s)	123, 263, 1056, 1104, 1199, 1346, 1413, 1638, 1701
MbiI	CCGCTC	1 cut(s)	1459
MboI	GATC	9 cut(s)	121, 261, 1054, 1102, 1197, 1344, 1411, 1636, 1699
MfeI	CAATTG	1 cut(s)	936
MflI	RGATCY	3 cut(s)	1102, 1344, 1699
MhlI	GDGCHC	6 cut(s)	42, 993, 1151, 1554, 1657, 1770
MluCI	AATT	9 cut(s)	330, 506, 585, 680, 845, 936, 1038, 1481, 1567
MlyI	GAGTC	5 cut(s)	67, 299, 1043, 1304, 1339
Mph1103I	ATGCAT	1 cut(s)	677
MseI	TTAA	4 cut(s)	129, 500, 509, 1813
MslI	CAYNNNNRTG	3 cut(s)	921, 1144, 1358
MspA1I	CMGCKG	2 cut(s)	35, 275
MspI	CCGG	3 cut(s)	21, 89, 1757
MspR9I	CCNGG	2 cut(s)	560, 1253
MunI	CAATTG	1 cut(s)	936
Mva1269I	GAATGC	2 cut(s)	1287, 1528
MvaI	CCWGG	2 cut(s)	560, 1253
MvnI	CGCG	1 cut(s)	576
MwoI	GCNNNNNNNGC	2 cut(s)	32, 992
NcoI	CCATGG	1 cut(s)	1286
NdeI	CATATG	1 cut(s)	1574
NdeII	GATC	9 cut(s)	121, 261, 1054, 1102, 1197, 1344, 1411, 1636, 1699
NlaIII	CATG	9 cut(s)	183, 675, 802, 950, 1290, 1295, 1430, 1535, 1544
NlaIV	GGNNCC	8 cut(s)	185, 469, 609, 1148, 1250, 1674, 1675, 1738
NmuCI	GTSAC	4 cut(s)	1241, 1307, 1393, 1628
NsiI	ATGCAT	1 cut(s)	677
NspI	RCATGY	2 cut(s)	802, 1295
OliI	CACNNNNGTG	1 cut(s)	1144
PaeI	GCATGC	1 cut(s)	1295
PceI	AGGCCT	1 cut(s)	1256
PciSI	GCTCTTC	2 cut(s)	1302, 1758
PcsI	WCGNNNNNNNCGW	1 cut(s)	196
PctI	GAATGC	2 cut(s)	1287, 1528
PfeI	GAWTC	4 cut(s)	17, 344, 1083, 1338
PflFI	GACNNNGTC	1 cut(s)	192
PkrI	GCNGC	2 cut(s)	34, 529
PleI	GAGTC	5 cut(s)	67, 298, 1042, 1304, 1338
PmaCI	CACGTG	1 cut(s)	356
PmlI	CACGTG	1 cut(s)	356
PpsI	GAGTC	5 cut(s)	67, 298, 1042, 1304, 1338
Ppu21I	YACGTR	1 cut(s)	356
PpuMI	RGGWCCY	1 cut(s)	1673
Psp124BI	GAGCTC	2 cut(s)	42, 993
Psp1406I	AACGTT	1 cut(s)	199
Psp5II	RGGWCCY	1 cut(s)	1673
Psp6I	CCWGG	2 cut(s)	558, 1251
PspCI	CACGTG	1 cut(s)	356
PspFI	CCCAGC	1 cut(s)	157
PspGI	CCWGG	2 cut(s)	558, 1251
PspN4I	GGNNCC	8 cut(s)	185, 469, 609, 1148, 1250, 1674, 1675, 1738
PspPI	GGNCC	4 cut(s)	184, 1249, 1376, 1673
PspPPI	RGGWCCY	1 cut(s)	1673
PstNI	CAGNNNCTG	1 cut(s)	547
PsuI	RGATCY	3 cut(s)	1102, 1344, 1699
PsyI	GACNNNGTC	1 cut(s)	192
PvuII	CAGCTG	1 cut(s)	275
RsaI	GTAC	1 cut(s)	305
RsaNI	GTAC	1 cut(s)	304
RseI	CAYNNNNRTG	3 cut(s)	921, 1144, 1358
SacI	GAGCTC	2 cut(s)	42, 993
SapI	GCTCTTC	2 cut(s)	1302, 1758
SaqAI	TTAA	4 cut(s)	129, 500, 509, 1813
SatI	GCNGC	2 cut(s)	33, 528
Sau3AI	GATC	9 cut(s)	121, 261, 1054, 1102, 1197, 1344, 1411, 1636, 1699
Sau96I	GGNCC	4 cut(s)	184, 1249, 1376, 1673
SchI	GAGTC	5 cut(s)	67, 299, 1043, 1304, 1339
ScrFI	CCNGG	2 cut(s)	560, 1253
SduI	GDGCHC	6 cut(s)	42, 993, 1151, 1554, 1657, 1770
SfcI	CTRYAG	1 cut(s)	27
SinI	GGWCC	4 cut(s)	184, 1249, 1376, 1673
SmiMI	CAYNNNNRTG	3 cut(s)	921, 1144, 1358
SmlI	CTYRAG	2 cut(s)	1312, 1327
SmoI	CTYRAG	2 cut(s)	1312, 1327
SphI	GCATGC	1 cut(s)	1295
Sse9I	AATT	9 cut(s)	330, 506, 585, 680, 845, 936, 1038, 1481, 1567
SseBI	AGGCCT	1 cut(s)	1256
SsiI	CCGC	4 cut(s)	5, 33, 395, 1459
SspMI	CTAG	3 cut(s)	51, 1239, 1415
SstI	GAGCTC	2 cut(s)	42, 993
StuI	AGGCCT	1 cut(s)	1256
StyD4I	CCNGG	2 cut(s)	558, 1251
StyI	CCWWGG	3 cut(s)	803, 1286, 1348
TaaI	ACNGT	6 cut(s)	11, 543, 556, 913, 1160, 1393
TaiI	ACGT	2 cut(s)	202, 358
TaqI	TCGA	3 cut(s)	63, 255, 1263
TaqII	GACCGA	1 cut(s)	201
TasI	AATT	9 cut(s)	330, 506, 585, 680, 845, 936, 1038, 1481, 1567
TauI	GCSGC	1 cut(s)	35
TfiI	GAWTC	4 cut(s)	17, 344, 1083, 1338
Tru1I	TTAA	4 cut(s)	129, 500, 509, 1813
Tru9I	TTAA	4 cut(s)	129, 500, 509, 1813
TscAI	CASTG	2 cut(s)	445, 1456
TseFI	GTSAC	4 cut(s)	1241, 1307, 1393, 1628
TseI	GCWGC	1 cut(s)	527
Tsp45I	GTSAC	4 cut(s)	1241, 1307, 1393, 1628
TspDTI	ATGAA	4 cut(s)	783, 1222, 1415, 1561
TspGWI	ACGGA	1 cut(s)	1095
TspRI	CASTG	2 cut(s)	445, 1456
Tth111I	GACNNNGTC	1 cut(s)	192
VpaK11BI	GGWCC	4 cut(s)	184, 1249, 1376, 1673
XapI	RAATTY	3 cut(s)	680, 1481, 1567
XceI	RCATGY	2 cut(s)	802, 1295
XcmI	CCANNNNNNNNNTGG	1 cut(s)	844
XmiI	GTMKAC	1 cut(s)	659
XspI	CTAG	3 cut(s)	51, 1239, 1415
Zsp2I	ATGCAT	1 cut(s)	677

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.