Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4B

Orthogroup ID

OG0001775

Physical Location & Seq

Genomic Coordinates Reverse (-)

56477670 .. 56479997

Gene Structure 2328 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4BG417600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1413 bp

ATGGCCCACGGCGACGGTGACGGCGTTACTCACGACCTGTTCTCGCTGCTCGCCTCCGGCGATCGGGACTTCCTCGTCCGTAACAACGGCGACCAGGTAAAGATCAATACTTTGACTGGTAAGATTTTGGGTTTGTATTTCTCTGGATCATGGTGTGGTCCATGTCGTCGTTTCACCCCAAACTTGGTGGAGGTCTACCAGGACCTTGCTTCCAAAGGGGACTTTGAAGTTGTGTTTGTCTCTTCTGATAGAGATGAGGAGTCATTCAGTGGCTACTTCTCTGAAATGCCGTGGCTTGCTGTTCCCTTTTCGGATTTGGAGACCCGAAAAGGCCTGAAAGACTTGTTCAAAGTCAGGGGAATTCCTCATCTTGTTGTTATTGATGCCAATGGGAAGGTTTCCACTGATAAAGGGACTGTGGTTGTGAGGGAGTATGGTGTGGAGGGGTATCCGTTCACCGCGGAGAAGATTAGTTTCTTGAAAGAGCAAGAGGAGGCGGCTAAGAAGAATCAGTCCTTGAGTTCTCTCTTGGTTTCTAATTCTCGGGATTACTTGGTTCCGAGTGATGGGAATAAGTTTGCAGAGCTCGCTGAGTTAGAGAAAGCGAAAGATAAAGCACAAACTCTGGAGTCAATTTTGATTTATGGGGATCAAAATTTTGTCATTGGAAAAGACGGAATCAAGATTCCGGTGTCAGATCTTGTGGGGAAGAACATCCTCCTTTATTTCTCAGCACATTGGTGCCCTCCATGCCGTGCCTTTCTACCAAAACTTATGGAAGCCTATCACAAGATCAAGGCAAAGGATGATGCATTTGAAGTTATTTTCATCTCTAGTGACAGGGACCAAGCCTCTTTCGATGACTTTTTCTCTGGAATGCCATGGCTTGCTCTGCCCTTTGGTGACTCAAGAAAGGCATCCTTGAGTCGCCGATTCAAGGTCCAAGGCATCCCCATGCTTGTAGCCATTGGTCCTACTGGTCAAACAGTCACAAAAGAAGCAAGAGATCTCGTTATGCTTCATGGAGCTAATGCTTATCCTTTCACTGAGGAGCGGCTGAAAGAGATAGAAGCAGAATTTAAGGAGATGGCAAAGAGGTGGCCTGAGAAGTTGAAGAATGCACTCCATGAGGAGCATGAGCTTGTGCTCTCTCGCCGAAGAAGTTTCATATGTGATGGGTGCAACGAGAAAGGAGAGGTGTGGTCATTCTATTGCGAGGAGTGTGACTTTGATCTCCATCCAAAGTGTGCTCTGGAGGAAGAAAAGGGAACCAAAACTGATGCCAAGCCGGAAGTAGATCCCCATCCAAAGTGTGCTTTGGAGGAGGAAAAGGGAACCAAAACTGATGCCAAGCCGGAAGAAGAGCCCCAAGAAGGATGGGTATGCGATGGTGAAGTTTGTAAAAAAGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0001558 GO:0003006 GO:0003674 GO:0003824 GO:0004791 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006935 GO:0008150 GO:0008152 GO:0009605 GO:0009636 GO:0009653 GO:0009826 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0010035 GO:0010038 GO:0010183 GO:0010769 GO:0015036 GO:0016043 GO:0016049 GO:0016209 GO:0016491 GO:0016651 GO:0016667 GO:0016668 GO:0022414 GO:0022603 GO:0022604 GO:0030154 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0040008 GO:0040011 GO:0042221 GO:0042330 GO:0043900 GO:0044424 GO:0044444 GO:0044464 GO:0044706 GO:0045595 GO:0046686 GO:0048468 GO:0048588 GO:0048589 GO:0048638 GO:0048856 GO:0048868 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0050918 GO:0051128 GO:0051239 GO:0051510 GO:0051704 GO:0051716 GO:0055114 GO:0060284 GO:0060560 GO:0065007 GO:0070887 GO:0071840 GO:0080092 GO:0097237 GO:0098754 GO:0098869 GO:1990748 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

C1_2 Thioredoxin_8

Protein Analysis

470

Amino Acids

52.79

Weight (kDa)

5.19

Isoelectric Point (pI)

36.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Redoxin	PF08534	26 - 135	1.4e-07	Redoxin
AhpC-TSA	PF00578	28 - 134	5.9e-08	AhpC/TSA family
Thioredoxin_2	PF13098	39 - 132	3.6e-06	Thioredoxin-like domain
Thioredoxin_8	PF13905	40 - 133	2.4e-28	Thioredoxin-like
Redoxin	PF08534	222 - 321	7.4e-07	Redoxin
AhpC-TSA	PF00578	224 - 315	1.4e-08	AhpC/TSA family
Thioredoxin_8	PF13905	236 - 328	2.6e-27	Thioredoxin-like
Thioredoxin_2	PF13098	236 - 326	9.2e-07	Thioredoxin-like domain
C1_2	PF03107	375 - 417	9.8e-09	C1 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001775)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G70480 AT1G70480
fragaria_vesca	FvH4_4g34241 FvH4_4g34250 FvH4_4g34260 FvH4_4g34260 FvH4_4g34260 FvH4_4g34260
malus_domestica	MD13G1093300.v1.1 MD13G1093500.v1.1 MD16G1094500.v1.1 MD16G1094600.v1.1 MD16G1094700.v1.1
prunus_persica	Prupe.1G251900_v2.0.a1 Prupe.1G252000_v2.0.a1
pyrus_communis	pycom13g08130 pycom13g08140 pycom16g08030 pycom16g08040 pycom16g08050
rosa_chinensis	RchiOBHm_Chr4g0443711 RchiOBHm_Chr6g0250421
rosa_laevigata	RLG00000005898 RLG00000005899 RLG00000005900
rosa_multiflora	Rmu_co8463221.1_g000001 Rmu_sc0001426.1_g000010 Rmu_sc0001426.1_g000011 Rmu_sc0001426.1_g000013 Rmu_sc0008739.1_g000001
rosa_roxburghii	Rroxscaffold_5G00384250 Rroxscaffold_5G00384260 Rroxscaffold_5G00384270
rosa_rugosa	Rorug05G0496400 Rorug05G0496500
rosa_samantha	Rh4AG406400 Rh4AG406500 Rh4AG406600 Rh4BG417400 Rh4BG417500 Rh4BG417600 Rh4BG417700 Rh4CG431900 Rh4DG413000
rosa_wichuraiana	Rw4G034900 Rw4G034910 Rw4G034920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	74
AccB1I	GGYRCC	1 cut(s)	741
AccBSI	CCGCTC	1 cut(s)	1054
AccI	GTMKAC	1 cut(s)	195
AccII	CGCG	1 cut(s)	461
AciI	CCGC	4 cut(s)	459, 461, 497, 1054
AclWI	GGATC	3 cut(s)	154, 657, 1292
AcsI	RAATTY	3 cut(s)	360, 655, 1076
AfiI	CCNNNNNNNGG	5 cut(s)	63, 184, 566, 937, 1373
AgsI	TTSAA	6 cut(s)	227, 349, 481, 818, 937, 1114
AjnI	CCWGG	2 cut(s)	93, 198
AleI	CACNNNNGTG	1 cut(s)	739
AluBI	AGCT	4 cut(s)	586, 1028, 1141, 1409
AluI	AGCT	4 cut(s)	586, 1028, 1141, 1409
Alw21I	GWGCWC	3 cut(s)	588, 1149, 1252
Alw26I	GTCTC	2 cut(s)	244, 314
AlwI	GGATC	3 cut(s)	154, 657, 1292
Ama87I	CYCGRG	1 cut(s)	543
AoxI	GGCC	3 cut(s)	3, 331, 1100
ApeKI	GCWGC	1 cut(s)	46
ApoI	RAATTY	3 cut(s)	360, 655, 1076
AspS9I	GGNCC	6 cut(s)	4, 158, 202, 844, 940, 971
AsuHPI	GGTGA	5 cut(s)	29, 166, 448, 914, 1403
AvaI	CYCGRG	1 cut(s)	543
AvaII	GGWCC	5 cut(s)	158, 202, 844, 940, 971
BaeGI	GKGCMC	1 cut(s)	746
BanI	GGYRCC	1 cut(s)	741
BanII	GRGCYC	2 cut(s)	588, 1368
Bbv12I	GWGCWC	3 cut(s)	588, 1149, 1252
BbvI	GCAGC	1 cut(s)	33
BccI	CCATC	7 cut(s)	560, 1081, 1169, 1245, 1311, 1371, 1382
BceAI	ACGGC	5 cut(s)	25, 37, 103, 274, 738
BciT130I	CCWGG	2 cut(s)	95, 200
BciVI	GTATCC	1 cut(s)	459
BcoDI	GTCTC	2 cut(s)	244, 314
BfaI	CTAG	1 cut(s)	834
BfuI	GTATCC	1 cut(s)	459
BglII	AGATCT	2 cut(s)	697, 1006
BisI	GCNGC	3 cut(s)	47, 498, 1055
BlsI	GCNGC	3 cut(s)	48, 499, 1056
Bme1390I	CCNGG	2 cut(s)	95, 200
Bme18I	GGWCC	5 cut(s)	158, 202, 844, 940, 971
BmeT110I	CYCGRG	1 cut(s)	543
BmgT120I	GGNCC	6 cut(s)	4, 158, 202, 844, 940, 971
BmiI	GGNNCC	5 cut(s)	558, 743, 845, 1270, 1336
BmrFI	CCNGG	2 cut(s)	95, 200
BmsI	GCATC	6 cut(s)	373, 799, 926, 957, 1270, 1336
BpmI	CTGGAG	2 cut(s)	647, 1274
BpuEI	CTTGAG	3 cut(s)	538, 892, 943
BsaBI	GATNNNNATC	2 cut(s)	1236, 1302
BsaI	GGTCTC	1 cut(s)	314
BsaJI	CCNNGG	5 cut(s)	7, 290, 459, 881, 943
BsaWI	WCCGGW	1 cut(s)	688
Bsc4I	CCNNNNNNNGG	5 cut(s)	63, 184, 566, 937, 1373
Bse1I	ACTGG	2 cut(s)	121, 982
Bse8I	GATNNNNATC	2 cut(s)	1236, 1302
BseBI	CCWGG	2 cut(s)	95, 200
BseDI	CCNNGG	5 cut(s)	7, 290, 459, 881, 943
BseGI	GGATG	7 cut(s)	714, 811, 917, 948, 1237, 1303, 1382
BseJI	GATNNNNATC	2 cut(s)	1236, 1302
BseLI	CCNNNNNNNGG	5 cut(s)	63, 184, 566, 937, 1373
BseMII	CTCAG	4 cut(s)	582, 744, 1038, 1095
BseNI	ACTGG	2 cut(s)	121, 982
BseRI	GAGGAG	6 cut(s)	272, 506, 1064, 1145, 1232, 1337
BseSI	GKGCMC	1 cut(s)	746
BseXI	GCAGC	1 cut(s)	33
Bsh1236I	CGCG	1 cut(s)	461
Bsh1285I	CGRYCG	1 cut(s)	64
BshFI	GGCC	3 cut(s)	5, 333, 1102
BshNI	GGYRCC	1 cut(s)	741
BsiEI	CGRYCG	1 cut(s)	64
BsiHKAI	GWGCWC	3 cut(s)	588, 1149, 1252
BsiHKCI	CYCGRG	1 cut(s)	543
BsiSI	CCGG	4 cut(s)	57, 689, 1289, 1355
BslFI	GGGAC	4 cut(s)	80, 233, 427, 857
BslI	CCNNNNNNNGG	5 cut(s)	63, 184, 566, 937, 1373
BsmAI	GTCTC	2 cut(s)	244, 314
BsmFI	GGGAC	4 cut(s)	80, 233, 427, 857
BsmI	GAATGC	2 cut(s)	882, 1123
BsnI	GGCC	3 cut(s)	5, 333, 1102
Bso31I	GGTCTC	1 cut(s)	314
BsoBI	CYCGRG	1 cut(s)	543
Bsp1286I	GDGCHC	5 cut(s)	588, 746, 1149, 1252, 1368
Bsp143I	GATC	9 cut(s)	61, 102, 146, 649, 697, 792, 1006, 1231, 1297
Bsp19I	CCATGG	1 cut(s)	881
BspACI	CCGC	4 cut(s)	459, 461, 497, 1054
BspANI	GGCC	3 cut(s)	5, 333, 1102
BspCNI	CTCAG	4 cut(s)	583, 743, 1039, 1096
BspFNI	CGCG	1 cut(s)	461
BspLI	GGNNCC	5 cut(s)	558, 743, 845, 1270, 1336
BspPI	GGATC	3 cut(s)	154, 657, 1292
BspQI	GCTCTTC	1 cut(s)	1356
BspT107I	GGYRCC	1 cut(s)	741
BspTNI	GGTCTC	1 cut(s)	314
BsrBI	CCGCTC	1 cut(s)	1054
BsrI	ACTGG	2 cut(s)	121, 982
BssECI	CCNNGG	5 cut(s)	7, 290, 459, 881, 943
BssMI	GATC	9 cut(s)	61, 102, 146, 649, 697, 792, 1006, 1231, 1297
BssT1I	CCWWGG	2 cut(s)	881, 943
Bst2UI	CCWGG	2 cut(s)	95, 200
Bst4CI	ACNGT	3 cut(s)	17, 418, 988
Bst6I	CTCTTC	2 cut(s)	247, 1356
BstC8I	GCNNGC	4 cut(s)	51, 297, 588, 888
BstDEI	CTNAG	5 cut(s)	501, 591, 730, 1047, 1104
BstDSI	CCRYGG	4 cut(s)	7, 290, 459, 881
BstF5I	GGATG	7 cut(s)	714, 811, 917, 948, 1237, 1303, 1382
BstFNI	CGCG	1 cut(s)	461
BstKTI	GATC	9 cut(s)	64, 105, 149, 652, 700, 795, 1009, 1234, 1300
BstMAI	GTCTC	2 cut(s)	244, 314
BstMBI	GATC	9 cut(s)	61, 102, 146, 649, 697, 792, 1006, 1231, 1297
BstMCI	CGRYCG	1 cut(s)	64
BstMWI	GCNNNNNNNGC	3 cut(s)	587, 750, 892
BstNI	CCWGG	2 cut(s)	95, 200
BstSCI	CCNGG	2 cut(s)	93, 198
BstSLI	GKGCMC	1 cut(s)	746
BstUI	CGCG	1 cut(s)	461
BstV1I	GCAGC	1 cut(s)	33
BstX2I	RGATCY	3 cut(s)	697, 1006, 1297
BstYI	RGATCY	3 cut(s)	697, 1006, 1297
BsuI	GTATCC	1 cut(s)	459
BsuRI	GGCC	3 cut(s)	5, 333, 1102
BtgI	CCRYGG	4 cut(s)	7, 290, 459, 881
BtgZI	GCGATG	1 cut(s)	1401
BtsCI	GGATG	7 cut(s)	714, 811, 917, 948, 1237, 1303, 1382
BtsIMutI	CAGTG	3 cut(s)	274, 402, 1044
Cac8I	GCNNGC	4 cut(s)	51, 297, 588, 888
Cfr13I	GGNCC	6 cut(s)	4, 158, 202, 844, 940, 971
Cfr42I	CCGCGG	1 cut(s)	462
CsiI	ACCWGGT	1 cut(s)	93
CspCI	CAANNNNNGTGG	2 cut(s)	168, 203
CviAII	CATG	8 cut(s)	150, 162, 750, 882, 955, 1022, 1127, 1136
DdeI	CTNAG	5 cut(s)	501, 591, 730, 1047, 1104
DpnI	GATC	9 cut(s)	63, 104, 148, 651, 699, 794, 1008, 1233, 1299
DpnII	GATC	9 cut(s)	61, 102, 146, 649, 697, 792, 1006, 1231, 1297
DrdI	GACNNNNNNGTC	1 cut(s)	74
DseDI	GACNNNNNNGTC	1 cut(s)	74
Eam1104I	CTCTTC	2 cut(s)	247, 1356
EarI	CTCTTC	2 cut(s)	247, 1356
Ecl136II	GAGCTC	1 cut(s)	586
Eco130I	CCWWGG	2 cut(s)	881, 943
Eco147I	AGGCCT	1 cut(s)	333
Eco24I	GRGCYC	2 cut(s)	588, 1368
Eco31I	GGTCTC	1 cut(s)	314
Eco47I	GGWCC	5 cut(s)	158, 202, 844, 940, 971
Eco53kI	GAGCTC	1 cut(s)	586
Eco88I	CYCGRG	1 cut(s)	543
EcoICRI	GAGCTC	1 cut(s)	586
EcoO109I	RGGNCCY	1 cut(s)	202
EcoRI	GAATTC	1 cut(s)	360
EcoRII	CCWGG	2 cut(s)	93, 198
EcoT14I	CCWWGG	2 cut(s)	881, 943
EcoT22I	ATGCAT	1 cut(s)	814
EcoT38I	GRGCYC	2 cut(s)	588, 1368
ErhI	CCWWGG	2 cut(s)	881, 943
FaeI	CATG	8 cut(s)	153, 165, 753, 885, 958, 1025, 1130, 1139
FalI	AAGNNNNNCTT	2 cut(s)	905, 937
FaqI	GGGAC	4 cut(s)	80, 233, 427, 857
FatI	CATG	8 cut(s)	149, 161, 749, 881, 954, 1021, 1126, 1135
FauNDI	CATATG	1 cut(s)	1169
FblI	GTMKAC	1 cut(s)	195
Fnu4HI	GCNGC	3 cut(s)	47, 498, 1055
FokI	GGATG	7 cut(s)	701, 818, 904, 935, 1224, 1290, 1389
FriOI	GRGCYC	2 cut(s)	588, 1368
Fsp4HI	GCNGC	3 cut(s)	47, 498, 1055
FspBI	CTAG	1 cut(s)	834
GluI	GCNGC	3 cut(s)	47, 498, 1055
GsuI	CTGGAG	2 cut(s)	647, 1274
HaeIII	GGCC	3 cut(s)	5, 333, 1102
HapII	CCGG	4 cut(s)	57, 689, 1289, 1355
Hin1II	CATG	8 cut(s)	153, 165, 753, 885, 958, 1025, 1130, 1139
HindIII	AAGCTT	1 cut(s)	1407
HinfI	GANTC	8 cut(s)	260, 508, 629, 678, 685, 905, 925, 933
HpaII	CCGG	4 cut(s)	57, 689, 1289, 1355
HphI	GGTGA	5 cut(s)	29, 166, 448, 914, 1403
Hpy166II	GTNNAC	2 cut(s)	196, 456
Hpy188I	TCNGA	5 cut(s)	247, 283, 313, 561, 697
Hpy8I	GTNNAC	2 cut(s)	196, 456
Hpy99I	CGWCG	2 cut(s)	17, 171
HpyAV	CCTTC	2 cut(s)	388, 1367
HpyCH4III	ACNGT	3 cut(s)	17, 418, 988
HpyCH4V	TGCA	4 cut(s)	581, 812, 1121, 1182
HpyF10VI	GCNNNNNNNGC	3 cut(s)	587, 750, 892
HpyF3I	CTNAG	5 cut(s)	501, 591, 730, 1047, 1104
Hsp92II	CATG	8 cut(s)	153, 165, 753, 885, 958, 1025, 1130, 1139
KspI	CCGCGG	1 cut(s)	462
Kzo9I	GATC	9 cut(s)	61, 102, 146, 649, 697, 792, 1006, 1231, 1297
LguI	GCTCTTC	1 cut(s)	1356
LmnI	GCTCC	3 cut(s)	1025, 1051, 1132
Lsp1109I	GCAGC	1 cut(s)	33
LweI	GCATC	6 cut(s)	373, 799, 926, 957, 1270, 1336
MabI	ACCWGGT	1 cut(s)	93
MaeI	CTAG	1 cut(s)	834
MaeIII	GTNAC	7 cut(s)	17, 25, 80, 836, 902, 988, 1223
MalI	GATC	9 cut(s)	63, 104, 148, 651, 699, 794, 1008, 1233, 1299
MbiI	CCGCTC	1 cut(s)	1054
MboI	GATC	9 cut(s)	61, 102, 146, 649, 697, 792, 1006, 1231, 1297
MboII	GAAGA	9 cut(s)	234, 478, 517, 721, 1126, 1170, 1271, 1370, 1373
MflI	RGATCY	3 cut(s)	697, 1006, 1297
MhlI	GDGCHC	5 cut(s)	588, 746, 1149, 1252, 1368
MluCI	AATT	5 cut(s)	360, 538, 633, 655, 1076
MlyI	GAGTC	4 cut(s)	269, 638, 899, 934
Mph1103I	ATGCAT	1 cut(s)	814
MseI	TTAA	2 cut(s)	1080, 1411
MslI	CAYNNNNRTG	2 cut(s)	739, 953
MspA1I	CMGCKG	1 cut(s)	461
MspI	CCGG	4 cut(s)	57, 689, 1289, 1355
MspR9I	CCNGG	2 cut(s)	95, 200
Mva1269I	GAATGC	2 cut(s)	882, 1123
MvaI	CCWGG	2 cut(s)	95, 200
MvnI	CGCG	1 cut(s)	461
MwoI	GCNNNNNNNGC	3 cut(s)	587, 750, 892
NcoI	CCATGG	1 cut(s)	881
NdeI	CATATG	1 cut(s)	1169
NdeII	GATC	9 cut(s)	61, 102, 146, 649, 697, 792, 1006, 1231, 1297
NlaIII	CATG	8 cut(s)	153, 165, 753, 885, 958, 1025, 1130, 1139
NlaIV	GGNNCC	5 cut(s)	558, 743, 845, 1270, 1336
NmuCI	GTSAC	5 cut(s)	17, 836, 902, 988, 1223
NsiI	ATGCAT	1 cut(s)	814
OliI	CACNNNNGTG	1 cut(s)	739
PceI	AGGCCT	1 cut(s)	333
PciSI	GCTCTTC	1 cut(s)	1356
PcsI	WCGNNNNNNNCGW	2 cut(s)	21, 57
PctI	GAATGC	2 cut(s)	882, 1123
PfeI	GAWTC	4 cut(s)	508, 678, 685, 933
PkrI	GCNGC	3 cut(s)	48, 499, 1056
Ple19I	CGATCG	1 cut(s)	64
PleI	GAGTC	4 cut(s)	268, 637, 899, 933
PpsI	GAGTC	4 cut(s)	268, 637, 899, 933
PpuMI	RGGWCCY	1 cut(s)	202
Psp124BI	GAGCTC	1 cut(s)	588
Psp5II	RGGWCCY	1 cut(s)	202
Psp6I	CCWGG	2 cut(s)	93, 198
PspGI	CCWGG	2 cut(s)	93, 198
PspN4I	GGNNCC	5 cut(s)	558, 743, 845, 1270, 1336
PspPI	GGNCC	6 cut(s)	4, 158, 202, 844, 940, 971
PspPPI	RGGWCCY	1 cut(s)	202
PsuI	RGATCY	3 cut(s)	697, 1006, 1297
PvuI	CGATCG	1 cut(s)	64
RseI	CAYNNNNRTG	2 cut(s)	739, 953
SacI	GAGCTC	1 cut(s)	588
SacII	CCGCGG	1 cut(s)	462
SapI	GCTCTTC	1 cut(s)	1356
SaqAI	TTAA	2 cut(s)	1080, 1411
SatI	GCNGC	3 cut(s)	47, 498, 1055
Sau3AI	GATC	9 cut(s)	61, 102, 146, 649, 697, 792, 1006, 1231, 1297
Sau96I	GGNCC	6 cut(s)	4, 158, 202, 844, 940, 971
SchI	GAGTC	4 cut(s)	269, 638, 899, 934
ScrFI	CCNGG	2 cut(s)	95, 200
SduI	GDGCHC	5 cut(s)	588, 746, 1149, 1252, 1368
SexAI	ACCWGGT	1 cut(s)	93
SfaNI	GCATC	6 cut(s)	373, 799, 926, 957, 1270, 1336
Sfr303I	CCGCGG	1 cut(s)	462
SgrBI	CCGCGG	1 cut(s)	462
SinI	GGWCC	5 cut(s)	158, 202, 844, 940, 971
SmiMI	CAYNNNNRTG	2 cut(s)	739, 953
SmlI	CTYRAG	3 cut(s)	517, 907, 922
SmoI	CTYRAG	3 cut(s)	517, 907, 922
Sse9I	AATT	5 cut(s)	360, 538, 633, 655, 1076
SseBI	AGGCCT	1 cut(s)	333
SsiI	CCGC	4 cut(s)	459, 461, 497, 1054
SspMI	CTAG	1 cut(s)	834
SstI	GAGCTC	1 cut(s)	588
StuI	AGGCCT	1 cut(s)	333
StyD4I	CCNGG	2 cut(s)	93, 198
StyI	CCWWGG	2 cut(s)	881, 943
TaaI	ACNGT	3 cut(s)	17, 418, 988
TaqI	TCGA	1 cut(s)	858
TasI	AATT	5 cut(s)	360, 538, 633, 655, 1076
TauI	GCSGC	2 cut(s)	500, 1057
TfiI	GAWTC	4 cut(s)	508, 678, 685, 933
Tru1I	TTAA	2 cut(s)	1080, 1411
Tru9I	TTAA	2 cut(s)	1080, 1411
TscAI	CASTG	3 cut(s)	274, 409, 1051
TseFI	GTSAC	5 cut(s)	17, 836, 902, 988, 1223
TseI	GCWGC	1 cut(s)	46
Tsp45I	GTSAC	5 cut(s)	17, 836, 902, 988, 1223
TspDTI	ATGAA	3 cut(s)	817, 1010, 1156
TspGWI	ACGGA	3 cut(s)	68, 441, 690
TspRI	CASTG	3 cut(s)	274, 409, 1051
VpaK11BI	GGWCC	5 cut(s)	158, 202, 844, 940, 971
XapI	RAATTY	3 cut(s)	360, 655, 1076
XmiI	GTMKAC	1 cut(s)	195
XspI	CTAG	1 cut(s)	834
Zsp2I	ATGCAT	1 cut(s)	814

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.