Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr16

Orthogroup ID

OG0001775

Physical Location & Seq

Genomic Coordinates Forward (+)

5302781 .. 5305358

Gene Structure 2578 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom16g08040.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1698 bp

ATGGCTAACGGCGACGTACACGGCGTCTCTCACAACCTCCTTTCTCTCCTCGCCTCCGCCGACAGAAACTTCCTCCTCCGCAACAACGGCGACCAGGTTAAGATCAGTAGTTTGACTGGAAAGATTGTGGGGTTGTATTTCTCCGCCTCGTGGTGCGGCCCCTGCCGCCGGTTCACCCCAAACTTGGTGGAGGTTTACCAGGACTTGGCTGCCAAAGGCGACTTTGAAGTTGTGTTCATCTCTTCTGATAGAGATGAGGAGTCGTTCAATGGATACTTCTCTAAAATGCCCTGGCTTTCGATTCCCTTTTCGGATATGGAGACCCTGAAACGCCTCAAGGAGTTCTTCAAAGTCAGGGGGATTCCCCATCTTGTCATTATTGATGCCAATGGGAAGGTTTCCATTGATGATGGAACTAAAATTGTGATGGACCACGGCGTGGATGGTTATCCGTTTACCGCGGAGAAGATGAATTTCTTGATTGAGCAGGAAGCCGCGGCGAAGGAGAATCAGTCCCTGAGTTCTCTTTTGGTCTCTAACTCCCGGGATTATTTGATTTCGAAGGATGGGAATAAGGTTTCTGTGTCCGAGCTTGAAGGAAAGATTGTAGGGTTGTATTTCTCGCTTTATACTCACAAGCCATGCAAAGAATTTACTCAGGCACTTGTGAAGTTCCATGAGAAACTGAAGGAGAAGGGAGAGAACTTTGAGATTGTATTGATATCTCTAGACCTTGAAGAGGAACACTTCAAAGAAGGATTTCAAGTGTCATGGTTGGCATTGCCGTTTAAGGACAAGAACTGTGAAAAACTTGCTCGCTACTTTGCGCTTGAGAGCTTACCTAGACTAGTTATAATTGGGCAAGATGGGAAGACCTTACACTCCAATGCGGCTGAACTCATTGAAGAGTATGGCGCTGAAGCCTATCCGTTTACAGCAGAGAAGATTGCTGAGCTTGCTGAGTTGAAACTCGAAGAACAGACTGTACAGTCACTTTTGGTTGCTGGGGGCAGAGACTTTGTGGTTGAAAAGAACGGTTCCAGGGTACCGGTGTCTGAGCTTGCTGGGAAGCACCTTCTGCTCTATTGCTCTGCTCATTGGTGCCGTCCATGTCGTGCATTCATGCCTAAGCTTATAAAAGCATACAATCAGATAAAGGCAAAGGACAATGCAATCGAAATAATCTTCCTCTCAAGCGATCGTGATCATCATTCCTTTGAAGAATTCTTTGGGACCATGCCTTGGTTAGCCATCCCATTAGGCGATCCAAGGAAGACCCTCCTGCAGCGCAAATTCAAAATCCAAGCAATTCCTGCATTGGTAGCCATTAGCCCCAGCGGCCAGACGCTCAGCACGCAGGCCCGGCAACTCATACAGGCGCATGGAGCTAATGCTTATCCATTCACCGAAGAGCACTTGAAGCAATTGGAGGAAAAGCTGGAGGAAGAAGCGAAGGGGTGGCCTGAGAAAGTGAAGAGTATACTCCATGCTGAACACGAGCTCACTCGTGTGCTCCACCACGACTATATTTGCTGGTGTAGGGAGCCCGGAAGTGGCTGGTCTTTTTACTGCAAAGACTGCGACTTCGATCTCCACCCAAGATGTGCTTTGGGCAACAATGGAGGAACAAAGGATGATGACCCTCCCAAAGCAACCGAGGATTATATTTGTGACGGCGATGTGTGCCGTAAAGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0001558 GO:0003006 GO:0003674 GO:0003824 GO:0004791 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006935 GO:0008150 GO:0008152 GO:0009605 GO:0009636 GO:0009653 GO:0009826 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0010035 GO:0010038 GO:0010183 GO:0010769 GO:0015036 GO:0016043 GO:0016049 GO:0016209 GO:0016491 GO:0016651 GO:0016667 GO:0016668 GO:0022414 GO:0022603 GO:0022604 GO:0030154 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0040008 GO:0040011 GO:0042221 GO:0042330 GO:0043900 GO:0044424 GO:0044444 GO:0044464 GO:0044706 GO:0045595 GO:0046686 GO:0048468 GO:0048588 GO:0048589 GO:0048638 GO:0048856 GO:0048868 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0050918 GO:0051128 GO:0051239 GO:0051510 GO:0051704 GO:0051716 GO:0055114 GO:0060284 GO:0060560 GO:0065007 GO:0070887 GO:0071840 GO:0080092 GO:0097237 GO:0098754 GO:0098869 GO:1990748 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

C1_2 Thioredoxin_8

Protein Analysis

566

Amino Acids

63.74

Weight (kDa)

5.74

Isoelectric Point (pI)

28.73

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001775)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G70480 AT1G70480
fragaria_vesca	FvH4_4g34241 FvH4_4g34250 FvH4_4g34260 FvH4_4g34260 FvH4_4g34260 FvH4_4g34260
malus_domestica	MD13G1093300.v1.1 MD13G1093500.v1.1 MD16G1094500.v1.1 MD16G1094600.v1.1 MD16G1094700.v1.1
prunus_persica	Prupe.1G251900_v2.0.a1 Prupe.1G252000_v2.0.a1
pyrus_communis	pycom13g08130 pycom13g08140 pycom16g08030 pycom16g08040 pycom16g08050
rosa_chinensis	RchiOBHm_Chr4g0443711 RchiOBHm_Chr6g0250421
rosa_laevigata	RLG00000005898 RLG00000005899 RLG00000005900
rosa_multiflora	Rmu_co8463221.1_g000001 Rmu_sc0001426.1_g000010 Rmu_sc0001426.1_g000011 Rmu_sc0001426.1_g000013 Rmu_sc0008739.1_g000001
rosa_roxburghii	Rroxscaffold_5G00384250 Rroxscaffold_5G00384260 Rroxscaffold_5G00384270
rosa_rugosa	Rorug05G0496400 Rorug05G0496500
rosa_samantha	Rh4AG406400 Rh4AG406500 Rh4AG406600 Rh4BG417400 Rh4BG417500 Rh4BG417600 Rh4BG417700 Rh4CG431900 Rh4DG413000
rosa_wichuraiana	Rw4G034900 Rw4G034910 Rw4G034920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	854, 1136
AasI	GACNNNNNNGTC	1 cut(s)	988
Acc65I	GGTACC	1 cut(s)	1045
AccB1I	GGYRCC	2 cut(s)	1045, 1101
AccB7I	CCANNNNNTGG	3 cut(s)	205, 439, 1242
AccI	GTMKAC	1 cut(s)	1480
AccII	CGCG	2 cut(s)	461, 497
AclWI	GGATC	1 cut(s)	1259
AcoI	YGGCCR	1 cut(s)	1339
AcsI	RAATTY	4 cut(s)	472, 650, 1223, 1292
AcuI	CTGAAG	2 cut(s)	707, 939
AcyI	GRCGYC	1 cut(s)	24
AdeI	CACNNNGTG	1 cut(s)	439
AfaI	GTAC	3 cut(s)	18, 987, 1047
AfiI	CCNNNNNNNGG	8 cut(s)	150, 168, 184, 205, 439, 739, 1242, 1553
AgeI	ACCGGT	1 cut(s)	1048
AhlI	ACTAGT	1 cut(s)	847
AjnI	CCWGG	4 cut(s)	93, 198, 290, 1040
AjuI	GAANNNNNNNTTGG	2 cut(s)	1212, 1244
AleI	CACNNNNGTG	1 cut(s)	1508
AluBI	AGCT	8 cut(s)	592, 837, 955, 1060, 1132, 1388, 1438, 1501
AluI	AGCT	8 cut(s)	592, 837, 955, 1060, 1132, 1388, 1438, 1501
Alw21I	GWGCWC	3 cut(s)	1416, 1503, 1515
Alw26I	GTCTC	4 cut(s)	31, 314, 538, 1008
AlwI	GGATC	1 cut(s)	1259
AlwNI	CAGNNNCTG	1 cut(s)	517
Ama87I	CYCGRG	1 cut(s)	543
AoxI	GGCC	4 cut(s)	157, 1339, 1359, 1460
ApeKI	GCWGC	2 cut(s)	209, 1285
ApoI	RAATTY	4 cut(s)	472, 650, 1223, 1292
ArsI	GACNNNNNNTTYG	2 cut(s)	1568, 1600
AsiGI	ACCGGT	1 cut(s)	1048
Asp700I	GAANNNNTTC	1 cut(s)	759
Asp718I	GGTACC	1 cut(s)	1045
AspLEI	GCGC	4 cut(s)	829, 917, 1290, 1381
AspS9I	GGNCC	4 cut(s)	158, 430, 1233, 1360
AsuC2I	CCSGG	4 cut(s)	544, 545, 1363, 1548
AsuHPI	GGTGA	2 cut(s)	166, 1396
AsuII	TTCGAA	1 cut(s)	560
AvaI	CYCGRG	1 cut(s)	543
AvaII	GGWCC	2 cut(s)	430, 1233
BaeI	ACNNNNGTAYC	2 cut(s)	1037, 1070
BanI	GGYRCC	2 cut(s)	1045, 1101
BanII	GRGCYC	2 cut(s)	1503, 1548
BauI	CACGAG	3 cut(s)	148, 1496, 1506
BbsI	GAAGAC	2 cut(s)	878, 1280
Bbv12I	GWGCWC	3 cut(s)	1416, 1503, 1515
BbvI	GCAGC	2 cut(s)	196, 1297
BccI	CCATC	7 cut(s)	375, 404, 421, 437, 560, 860, 1259
BceAI	ACGGC	8 cut(s)	25, 37, 103, 451, 769, 1089, 1671, 1690
BciT130I	CCWGG	4 cut(s)	95, 200, 292, 1042
BciVI	GTATCC	1 cut(s)	266
BclI	TGATCA	1 cut(s)	1204
BcnI	CCSGG	4 cut(s)	544, 545, 1363, 1548
BcoDI	GTCTC	4 cut(s)	31, 314, 538, 1008
BcuI	ACTAGT	1 cut(s)	847
BfaI	CTAG	3 cut(s)	728, 843, 848
BfmI	CTRYAG	1 cut(s)	1283
BfoI	RGCGCY	1 cut(s)	918
BfuI	GTATCC	1 cut(s)	266
BglI	GCCNNNNNGGC	1 cut(s)	1338
BisI	GCNGC	8 cut(s)	157, 166, 210, 495, 498, 891, 1286, 1339
BlpI	GCTNAGC	2 cut(s)	951, 1349
BlsI	GCNGC	8 cut(s)	158, 167, 211, 496, 499, 892, 1287, 1340
Bme1390I	CCNGG	8 cut(s)	95, 200, 292, 544, 545, 1042, 1363, 1548
Bme18I	GGWCC	2 cut(s)	430, 1233
BmeT110I	CYCGRG	1 cut(s)	543
BmgT120I	GGNCC	4 cut(s)	158, 430, 1233, 1360
BmiI	GGNNCC	6 cut(s)	160, 1039, 1047, 1103, 1234, 1545
BmrFI	CCNGG	8 cut(s)	95, 200, 292, 544, 545, 1042, 1363, 1548
BmsI	GCATC	1 cut(s)	373
BpiI	GAAGAC	2 cut(s)	878, 1280
BpmI	CTGGAG	1 cut(s)	1460
Bpu10I	CCTNAGC	1 cut(s)	1128
Bpu1102I	GCTNAGC	2 cut(s)	951, 1349
Bpu14I	TTCGAA	1 cut(s)	560
BpuEI	CTTGAG	3 cut(s)	320, 851, 1177
BpuMI	CCSGG	4 cut(s)	544, 545, 1363, 1548
BsaBI	GATNNNNATC	2 cut(s)	447, 1203
BsaHI	GRCGYC	1 cut(s)	24
BsaI	GGTCTC	2 cut(s)	314, 538
BsaJI	CCNNGG	9 cut(s)	290, 433, 459, 495, 543, 1041, 1241, 1268, 1656
BsaWI	WCCGGW	1 cut(s)	1048
BsaXI	ACNNNNNCTCC	2 cut(s)	497, 527
Bsc4I	CCNNNNNNNGG	8 cut(s)	150, 168, 184, 205, 439, 739, 1242, 1553
Bse118I	RCCGGY	2 cut(s)	168, 1048
Bse1I	ACTGG	1 cut(s)	121
Bse3DI	GCAATG	1 cut(s)	779
Bse8I	GATNNNNATC	2 cut(s)	447, 1203
BseBI	CCWGG	4 cut(s)	95, 200, 292, 1042
BseDI	CCNNGG	9 cut(s)	290, 433, 459, 495, 543, 1041, 1241, 1268, 1656
BseGI	GGATG	4 cut(s)	448, 571, 1251, 1639
BseJI	GATNNNNATC	2 cut(s)	447, 1203
BseLI	CCNNNNNNNGG	8 cut(s)	150, 168, 184, 205, 439, 739, 1242, 1553
BseMI	GCAATG	1 cut(s)	779
BseMII	CTCAG	7 cut(s)	509, 671, 942, 951, 1047, 1363, 1455
BseNI	ACTGG	1 cut(s)	121
BseRI	GAGGAG	3 cut(s)	38, 65, 272
BseXI	GCAGC	2 cut(s)	196, 1297
BseYI	CCCAGC	3 cut(s)	1004, 1064, 1334
Bsh1236I	CGCG	2 cut(s)	461, 497
Bsh1285I	CGRYCG	1 cut(s)	1201
BshFI	GGCC	4 cut(s)	159, 1341, 1361, 1462
BshNI	GGYRCC	2 cut(s)	1045, 1101
BshTI	ACCGGT	1 cut(s)	1048
BsiEI	CGRYCG	1 cut(s)	1201
BsiHKAI	GWGCWC	3 cut(s)	1416, 1503, 1515
BsiHKCI	CYCGRG	1 cut(s)	543
BsiSI	CCGG	5 cut(s)	169, 544, 1049, 1363, 1548
BslFI	GGGAC	2 cut(s)	499, 1246
BslI	CCNNNNNNNGG	8 cut(s)	150, 168, 184, 205, 439, 739, 1242, 1553
BsmAI	GTCTC	4 cut(s)	31, 314, 538, 1008
BsmBI	CGTCTC	1 cut(s)	31
BsmFI	GGGAC	2 cut(s)	499, 1246
BsmI	GAATGC	1 cut(s)	1118
BsnI	GGCC	4 cut(s)	159, 1341, 1361, 1462
Bso31I	GGTCTC	2 cut(s)	314, 538
BsoBI	CYCGRG	1 cut(s)	543
Bsp119I	TTCGAA	1 cut(s)	560
Bsp1286I	GDGCHC	4 cut(s)	1416, 1503, 1515, 1548
Bsp1407I	TGTACA	1 cut(s)	985
Bsp143I	GATC	5 cut(s)	102, 1198, 1204, 1264, 1588
Bsp1720I	GCTNAGC	2 cut(s)	951, 1349
BspANI	GGCC	4 cut(s)	159, 1341, 1361, 1462
BspCNI	CTCAG	7 cut(s)	510, 670, 943, 952, 1048, 1362, 1456
BspFNI	CGCG	2 cut(s)	461, 497
BspLI	GGNNCC	6 cut(s)	160, 1039, 1047, 1103, 1234, 1545
BspMAI	CTGCAG	1 cut(s)	1287
BspPI	GGATC	1 cut(s)	1259
BspQI	GCTCTTC	1 cut(s)	1404
BspT104I	TTCGAA	1 cut(s)	560
BspT107I	GGYRCC	2 cut(s)	1045, 1101
BspTNI	GGTCTC	2 cut(s)	314, 538
BsrDI	GCAATG	1 cut(s)	779
BsrFI	RCCGGY	2 cut(s)	168, 1048
BsrGI	TGTACA	1 cut(s)	985
BsrI	ACTGG	1 cut(s)	121
BssAI	RCCGGY	2 cut(s)	168, 1048
BssECI	CCNNGG	9 cut(s)	290, 433, 459, 495, 543, 1041, 1241, 1268, 1656
BssMI	GATC	5 cut(s)	102, 1198, 1204, 1264, 1588
BssNAI	GTATAC	1 cut(s)	1481
BssNI	GRCGYC	1 cut(s)	24
BssSI	CACGAG	3 cut(s)	148, 1496, 1506
BssT1I	CCWWGG	2 cut(s)	1241, 1268
Bst1107I	GTATAC	1 cut(s)	1481
Bst2BI	CACGAG	3 cut(s)	148, 1496, 1506
Bst2UI	CCWGG	4 cut(s)	95, 200, 292, 1042
Bst4CI	ACNGT	4 cut(s)	803, 985, 990, 1037
Bst6I	CTCTTC	5 cut(s)	247, 732, 900, 1404, 1469
BstACI	GRCGYC	1 cut(s)	24
BstAPI	GCANNNNNTGC	3 cut(s)	1078, 1313, 1578
BstAUI	TGTACA	1 cut(s)	985
BstBI	TTCGAA	1 cut(s)	560
BstC8I	GCNNGC	5 cut(s)	817, 957, 1062, 1355, 1359
BstDEI	CTNAG	8 cut(s)	518, 657, 951, 960, 1056, 1128, 1349, 1464
BstDSI	CCRYGG	3 cut(s)	433, 459, 495
BstENI	CCTNNNNNAGG	1 cut(s)	737
BstF5I	GGATG	4 cut(s)	448, 571, 1251, 1639
BstFNI	CGCG	2 cut(s)	461, 497
BstH2I	RGCGCY	1 cut(s)	918
BstHHI	GCGC	4 cut(s)	829, 917, 1290, 1381
BstKTI	GATC	5 cut(s)	105, 1201, 1207, 1267, 1591
BstMAI	GTCTC	4 cut(s)	31, 314, 538, 1008
BstMBI	GATC	5 cut(s)	102, 1198, 1204, 1264, 1588
BstMCI	CGRYCG	1 cut(s)	1201
BstNI	CCWGG	4 cut(s)	95, 200, 292, 1042
BstSCI	CCNGG	8 cut(s)	93, 198, 290, 542, 543, 1040, 1361, 1546
BstSFI	CTRYAG	1 cut(s)	1283
BstUI	CGCG	2 cut(s)	461, 497
BstV1I	GCAGC	2 cut(s)	196, 1297
BstV2I	GAAGAC	2 cut(s)	878, 1280
BstZ17I	GTATAC	1 cut(s)	1481
BsuI	GTATCC	1 cut(s)	266
BsuRI	GGCC	4 cut(s)	159, 1341, 1361, 1462
BtgI	CCRYGG	3 cut(s)	433, 459, 495
BtgZI	GCGATG	1 cut(s)	1692
BtsCI	GGATG	4 cut(s)	448, 571, 1251, 1639
Cac8I	GCNNGC	5 cut(s)	817, 957, 1062, 1355, 1359
CaiI	CAGNNNCTG	1 cut(s)	517
CfoI	GCGC	4 cut(s)	829, 917, 1290, 1381
Cfr10I	RCCGGY	2 cut(s)	168, 1048
Cfr13I	GGNCC	4 cut(s)	158, 430, 1233, 1360
Cfr42I	CCGCGG	2 cut(s)	462, 498
Cfr9I	CCCGGG	1 cut(s)	543
CseI	GACGC	2 cut(s)	13, 1354
CsiI	ACCWGGT	1 cut(s)	93
Csp6I	GTAC	3 cut(s)	17, 986, 1046
CspAI	ACCGGT	1 cut(s)	1048
CspCI	CAANNNNNGTGG	2 cut(s)	168, 203
CviAII	CATG	8 cut(s)	642, 677, 771, 1110, 1123, 1237, 1382, 1487
CviQI	GTAC	3 cut(s)	17, 986, 1046
DdeI	CTNAG	8 cut(s)	518, 657, 951, 960, 1056, 1128, 1349, 1464
DpnI	GATC	5 cut(s)	104, 1200, 1206, 1266, 1590
DpnII	GATC	5 cut(s)	102, 1198, 1204, 1264, 1588
DraIII	CACNNNGTG	1 cut(s)	439
DrdI	GACNNNNNNGTC	1 cut(s)	988
DseDI	GACNNNNNNGTC	1 cut(s)	988
EaeI	YGGCCR	1 cut(s)	1339
Eam1104I	CTCTTC	5 cut(s)	247, 732, 900, 1404, 1469
EarI	CTCTTC	5 cut(s)	247, 732, 900, 1404, 1469
EciI	GGCGGA	2 cut(s)	46, 133
Ecl136II	GAGCTC	1 cut(s)	1501
Eco130I	CCWWGG	2 cut(s)	1241, 1268
Eco24I	GRGCYC	2 cut(s)	1503, 1548
Eco31I	GGTCTC	2 cut(s)	314, 538
Eco32I	GATATC	1 cut(s)	723
Eco47I	GGWCC	2 cut(s)	430, 1233
Eco53kI	GAGCTC	1 cut(s)	1501
Eco57I	CTGAAG	2 cut(s)	707, 939
Eco88I	CYCGRG	1 cut(s)	543
EcoICRI	GAGCTC	1 cut(s)	1501
EcoNI	CCTNNNNNAGG	1 cut(s)	737
EcoRI	GAATTC	1 cut(s)	1223
EcoRII	CCWGG	4 cut(s)	93, 198, 290, 1040
EcoRV	GATATC	1 cut(s)	723
EcoT14I	CCWWGG	2 cut(s)	1241, 1268
EcoT38I	GRGCYC	2 cut(s)	1503, 1548
ErhI	CCWWGG	2 cut(s)	1241, 1268
Esp3I	CGTCTC	1 cut(s)	31
FaeI	CATG	8 cut(s)	645, 680, 774, 1113, 1126, 1240, 1385, 1490
FalI	AAGNNNNNCTT	4 cut(s)	329, 361, 1591, 1623
FaqI	GGGAC	2 cut(s)	499, 1246
FatI	CATG	8 cut(s)	641, 676, 770, 1109, 1122, 1236, 1381, 1486
FbaI	TGATCA	1 cut(s)	1204
FblI	GTMKAC	1 cut(s)	1480
Fnu4HI	GCNGC	8 cut(s)	157, 166, 210, 495, 498, 891, 1286, 1339
FokI	GGATG	4 cut(s)	455, 578, 1238, 1646
FriOI	GRGCYC	2 cut(s)	1503, 1548
Fsp4HI	GCNGC	8 cut(s)	157, 166, 210, 495, 498, 891, 1286, 1339
FspBI	CTAG	3 cut(s)	728, 843, 848
GlaI	GCGC	4 cut(s)	828, 916, 1289, 1380
GluI	GCNGC	8 cut(s)	157, 166, 210, 495, 498, 891, 1286, 1339
GsaI	CCCAGC	3 cut(s)	1008, 1068, 1338
GsuI	CTGGAG	1 cut(s)	1460
HaeII	RGCGCY	1 cut(s)	918
HaeIII	GGCC	4 cut(s)	159, 1341, 1361, 1462
HapII	CCGG	5 cut(s)	169, 544, 1049, 1363, 1548
HgaI	GACGC	2 cut(s)	13, 1354
HhaI	GCGC	4 cut(s)	829, 917, 1290, 1381
Hin1I	GRCGYC	1 cut(s)	24
Hin1II	CATG	8 cut(s)	645, 680, 774, 1113, 1126, 1240, 1385, 1490
Hin6I	GCGC	4 cut(s)	827, 915, 1288, 1379
HinP1I	GCGC	4 cut(s)	827, 915, 1288, 1379
HindIII	AAGCTT	1 cut(s)	1130
HinfI	GANTC	4 cut(s)	260, 301, 361, 508
HpaII	CCGG	5 cut(s)	169, 544, 1049, 1363, 1548
HphI	GGTGA	2 cut(s)	166, 1396
Hpy166II	GTNNAC	6 cut(s)	19, 174, 196, 456, 933, 1481
Hpy188I	TCNGA	5 cut(s)	247, 313, 589, 1057, 1152
Hpy188III	TCNNGA	3 cut(s)	478, 728, 1202
Hpy8I	GTNNAC	6 cut(s)	19, 174, 196, 456, 933, 1481
Hpy99I	CGWCG	1 cut(s)	17
HpyAV	CCTTC	9 cut(s)	388, 496, 556, 590, 682, 688, 749, 1085, 1447
HpyCH4III	ACNGT	4 cut(s)	803, 985, 990, 1037
HpyCH4IV	ACGT	1 cut(s)	15
HpyCH4V	TGCA	6 cut(s)	645, 1118, 1172, 1285, 1316, 1572
HpyF3I	CTNAG	8 cut(s)	518, 657, 951, 960, 1056, 1128, 1349, 1464
HpySE526I	ACGT	1 cut(s)	15
Hsp92I	GRCGYC	1 cut(s)	24
Hsp92II	CATG	8 cut(s)	645, 680, 774, 1113, 1126, 1240, 1385, 1490
HspAI	GCGC	4 cut(s)	827, 915, 1288, 1379
KpnI	GGTACC	1 cut(s)	1049
Ksp22I	TGATCA	1 cut(s)	1204
KspI	CCGCGG	2 cut(s)	462, 498
Kzo9I	GATC	5 cut(s)	102, 1198, 1204, 1264, 1588
LguI	GCTCTTC	1 cut(s)	1404
LmnI	GCTCC	3 cut(s)	1385, 1518, 1543
Lsp1109I	GCAGC	2 cut(s)	196, 1297
LweI	GCATC	1 cut(s)	373
MabI	ACCWGGT	1 cut(s)	93
MaeI	CTAG	3 cut(s)	728, 843, 848
MaeII	ACGT	1 cut(s)	15
MaeIII	GTNAC	2 cut(s)	990, 1670
MalI	GATC	5 cut(s)	104, 1200, 1206, 1266, 1590
MboI	GATC	5 cut(s)	102, 1198, 1204, 1264, 1588
MfeI	CAATTG	1 cut(s)	1424
MhlI	GDGCHC	4 cut(s)	1416, 1503, 1515, 1548
MluCI	AATT	8 cut(s)	420, 472, 650, 855, 1223, 1292, 1308, 1424
MlyI	GAGTC	1 cut(s)	269
MroXI	GAANNNNTTC	1 cut(s)	759
MseI	TTAA	2 cut(s)	99, 789
MslI	CAYNNNNRTG	2 cut(s)	885, 1508
MspA1I	CMGCKG	3 cut(s)	461, 497, 1338
MspI	CCGG	5 cut(s)	169, 544, 1049, 1363, 1548
MspR9I	CCNGG	8 cut(s)	95, 200, 292, 544, 545, 1042, 1363, 1548
MunI	CAATTG	1 cut(s)	1424
Mva1269I	GAATGC	1 cut(s)	1118
MvaI	CCWGG	4 cut(s)	95, 200, 292, 1042
MvnI	CGCG	2 cut(s)	461, 497
NciI	CCSGG	4 cut(s)	544, 545, 1363, 1548
NdeII	GATC	5 cut(s)	102, 1198, 1204, 1264, 1588
NlaIII	CATG	8 cut(s)	645, 680, 774, 1113, 1126, 1240, 1385, 1490
NlaIV	GGNNCC	6 cut(s)	160, 1039, 1047, 1103, 1234, 1545
NmuCI	GTSAC	2 cut(s)	990, 1670
NspV	TTCGAA	1 cut(s)	560
OliI	CACNNNNGTG	1 cut(s)	1508
PciSI	GCTCTTC	1 cut(s)	1404
PcsI	WCGNNNNNNNCGW	2 cut(s)	21, 57
PctI	GAATGC	1 cut(s)	1118
PdmI	GAANNNNTTC	1 cut(s)	759
PfeI	GAWTC	3 cut(s)	301, 361, 508
PflMI	CCANNNNNTGG	3 cut(s)	205, 439, 1242
PinAI	ACCGGT	1 cut(s)	1048
PkrI	GCNGC	8 cut(s)	158, 167, 211, 496, 499, 892, 1287, 1340
Ple19I	CGATCG	1 cut(s)	1201
PleI	GAGTC	1 cut(s)	268
PpsI	GAGTC	1 cut(s)	268
PsiI	TTATAA	2 cut(s)	854, 1136
Psp124BI	GAGCTC	1 cut(s)	1503
Psp6I	CCWGG	4 cut(s)	93, 198, 290, 1040
PspFI	CCCAGC	3 cut(s)	1004, 1064, 1334
PspGI	CCWGG	4 cut(s)	93, 198, 290, 1040
PspN4I	GGNNCC	6 cut(s)	160, 1039, 1047, 1103, 1234, 1545
PspPI	GGNCC	4 cut(s)	158, 430, 1233, 1360
PsrI	GAACNNNNNNTAC	2 cut(s)	969, 1001
PstI	CTGCAG	1 cut(s)	1287
PstNI	CAGNNNCTG	1 cut(s)	517
PvuI	CGATCG	1 cut(s)	1201
RsaI	GTAC	3 cut(s)	18, 987, 1047
RsaNI	GTAC	3 cut(s)	17, 986, 1046
RseI	CAYNNNNRTG	2 cut(s)	885, 1508
SacI	GAGCTC	1 cut(s)	1503
SacII	CCGCGG	2 cut(s)	462, 498
SapI	GCTCTTC	1 cut(s)	1404
SaqAI	TTAA	2 cut(s)	99, 789
SatI	GCNGC	8 cut(s)	157, 166, 210, 495, 498, 891, 1286, 1339
Sau3AI	GATC	5 cut(s)	102, 1198, 1204, 1264, 1588
Sau96I	GGNCC	4 cut(s)	158, 430, 1233, 1360
SchI	GAGTC	1 cut(s)	269
ScrFI	CCNGG	8 cut(s)	95, 200, 292, 544, 545, 1042, 1363, 1548
SduI	GDGCHC	4 cut(s)	1416, 1503, 1515, 1548
SexAI	ACCWGGT	1 cut(s)	93
SfaNI	GCATC	1 cut(s)	373
SfcI	CTRYAG	1 cut(s)	1283
Sfr303I	CCGCGG	2 cut(s)	462, 498
SfuI	TTCGAA	1 cut(s)	560
SgrBI	CCGCGG	2 cut(s)	462, 498
SinI	GGWCC	2 cut(s)	430, 1233
SmaI	CCCGGG	1 cut(s)	545
SmiMI	CAYNNNNRTG	2 cut(s)	885, 1508
SmlI	CTYRAG	3 cut(s)	335, 830, 1192
SmoI	CTYRAG	3 cut(s)	335, 830, 1192
SpeI	ACTAGT	1 cut(s)	847
Sse9I	AATT	8 cut(s)	420, 472, 650, 855, 1223, 1292, 1308, 1424
SspMI	CTAG	3 cut(s)	728, 843, 848
SstI	GAGCTC	1 cut(s)	1503
StyD4I	CCNGG	8 cut(s)	93, 198, 290, 542, 543, 1040, 1361, 1546
StyI	CCWWGG	2 cut(s)	1241, 1268
TaaI	ACNGT	4 cut(s)	803, 985, 990, 1037
TaiI	ACGT	1 cut(s)	18
TaqI	TCGA	5 cut(s)	299, 560, 972, 1176, 1587
TasI	AATT	8 cut(s)	420, 472, 650, 855, 1223, 1292, 1308, 1424
TatI	WGTACW	1 cut(s)	985
TauI	GCSGC	6 cut(s)	159, 168, 497, 500, 893, 1341
TfiI	GAWTC	3 cut(s)	301, 361, 508
Tru1I	TTAA	2 cut(s)	99, 789
Tru9I	TTAA	2 cut(s)	99, 789
TseFI	GTSAC	2 cut(s)	990, 1670
TseI	GCWGC	2 cut(s)	209, 1285
Tsp45I	GTSAC	2 cut(s)	990, 1670
TspDTI	ATGAA	3 cut(s)	226, 485, 1111
TspGWI	ACGGA	2 cut(s)	441, 918
TspMI	CCCGGG	1 cut(s)	543
Van91I	CCANNNNNTGG	3 cut(s)	205, 439, 1242
VpaK11BI	GGWCC	2 cut(s)	430, 1233
XagI	CCTNNNNNAGG	1 cut(s)	737
XapI	RAATTY	4 cut(s)	472, 650, 1223, 1292
XbaI	TCTAGA	1 cut(s)	727
XcmI	CCANNNNNNNNNTGG	1 cut(s)	440
XmaI	CCCGGG	1 cut(s)	543
XmiI	GTMKAC	1 cut(s)	1480
XmnI	GAANNNNTTC	1 cut(s)	759
XspI	CTAG	3 cut(s)	728, 843, 848

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.