Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0001775

Physical Location & Seq

Genomic Coordinates Forward (+)

2621772 .. 2624049

Gene Structure 2278 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000005899

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1722 bp

ATGGCTCACGGCGACGGTGACGGCATTACTCACGACCTGTTCTCGCTGCTCGCCTCCGGCGATCGGGACTTCCTCCTCCGTAACAACGGCGACCAGGTAAAGATCAATACTTTGACTGGTAAGATTTTGGGGTTGTATTTCTCTGGCTCATGGTGTGGTCCATGTCGTCGTTTCACCCCAAACTTGGTGGAGGTCTACCAGGACCTTGCTTCCAAAGGGTACTTTGAAGTTGTGTTTATCTCTTCTGATAGAGATGAGGAGTCATTCAGTCGCTACTTCTCTGAAATGCCGTGGCTTGCGGTTCCCTTTTCGGATTTGGAGACCCGAAAGGGCCTGAAAGACTTGTTCAAAGTCAGGGGAATTCCTCATCTTGTTGTTATTGATGCCAATGGGAAGGTTTCCACTGATAAAGGGACTGTAGTTGTGAGGGAGTATGGTGTGGAGGGGTACCCGTTCACCGCGGAGAAGATTAGTTTCTTGAAAGAGCAAGAGGAGGCGGCTAAGAAGAATCAGTCCTTGAGTTCTCTCTTGGTTTCTAATTCTCGGGATTACTTGGTTTCGAGTGATGGGAATAAGGTGCCTGTCTCTGAACTTGAAGGGAAGATGGTGGGTCTCTACTTCTCATTGTCTACATTCAGTCCATGCATAGAATTCACTCCAAAACTTGTGGAGGTTTATGAGAAGCTAAAAGCAAAGGGAGAGAGCTTTGAGATTGTGTTTATATCACTTGATGATGATGAAGCAGCATTTGAACAAGATTGTAAGAACATGCCTTGGTTTGCATTGCCCCAGAAGGACACCAAAACCATTAAGAAGCTGGCTCGGTATTTTGAGCTCTCAACCTTACCCACTTTGGTTATTATTGGGGCCGATGGTAAAACTGTCCATAACAATGTTGTTGAAGCTATTAACGAGCATGGGCTTCTGGCTTACCCTTTCACACCTGAGAAGTTTGCAGAGCTCGCTGAGATAGAGAAAGCGAAAGAGAAAGCACAAACTCTGGAGTCAATTTTGATTTCTGGGGATCAAAGCTTTGTCATTGGAAAAGACGGAATCAAGATTCCGGTGTCAGATCTTGTGGGGAAGAACATCCTCCTTTATTTCTCAGCACATTGGTGCCCTCCATGCCGTGCCTTTCTACCAAAACTTATGGAAGCCTATCACAAGATCAAGGCAAAGGATGATGCATTTGAAGTTATTTTCATCTCTAGTGACAGGGACCAAGCCTCTTTCGATGACTTTTTCTCTGGAATGCCATGGCTGGCTCTTCCCTTTGGTGACTCAAGAAAGGCATCCTTGAGTCGCCGATTCAAGGTCCAAGGCATCCCCATGCTTGTAGCCATTGGTCCTAGTGGTCAAACAGTCACAAAAGAAGCAAGAGATCTCGTTATGGTTCATGGAGCTAATGCTTATCCTTTCACTGAGGAGCGGCTGAAAGAGATAGAAGCAGAATTTAAGGAGATGGCAAAGAGGTGGCCTGAGAAGTTGAAGAATGCACTCCATGAGGAGCATGAGCTTGTGCTCTCTCGCCGAAGAAGTTTCATATGTGATGGGTGCAACGAGAAAGGAGAGGTGTGGTCATTCTATTGCGAGGACTGTGACTTTGATCTCCATCCAAAGTGTGCTCTGGAGGAGGAAAAGGGAACCAAAACTGATGCCAAGCCGGAAGAAGAGCCCCAAGAAGGATGGGTATGCGATGGTGAAGTCTGTAAAAAAGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0001558 GO:0003006 GO:0003674 GO:0003824 GO:0004791 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006935 GO:0008150 GO:0008152 GO:0009605 GO:0009636 GO:0009653 GO:0009826 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0010035 GO:0010038 GO:0010183 GO:0010769 GO:0015036 GO:0016043 GO:0016049 GO:0016209 GO:0016491 GO:0016651 GO:0016667 GO:0016668 GO:0022414 GO:0022603 GO:0022604 GO:0030154 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0040008 GO:0040011 GO:0042221 GO:0042330 GO:0043900 GO:0044424 GO:0044444 GO:0044464 GO:0044706 GO:0045595 GO:0046686 GO:0048468 GO:0048588 GO:0048589 GO:0048638 GO:0048856 GO:0048868 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0050918 GO:0051128 GO:0051239 GO:0051510 GO:0051704 GO:0051716 GO:0055114 GO:0060284 GO:0060560 GO:0065007 GO:0070887 GO:0071840 GO:0080092 GO:0097237 GO:0098754 GO:0098869 GO:1990748 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

C1_2 Thioredoxin_8

Protein Analysis

574

Amino Acids

64.48

Weight (kDa)

5.2

Isoelectric Point (pI)

37.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AhpC-TSA	PF00578	25 - 134	3.7e-08	AhpC/TSA family
Redoxin	PF08534	27 - 135	1.2e-06	Redoxin
Thioredoxin_8	PF13905	40 - 133	4.7e-28	Thioredoxin-like
Thioredoxin_8	PF13905	200 - 293	4.4e-22	Thioredoxin-like
Redoxin	PF08534	348 - 445	1.3e-06	Redoxin
AhpC-TSA	PF00578	349 - 440	2.3e-08	AhpC/TSA family
Thioredoxin_8	PF13905	361 - 453	1.3e-27	Thioredoxin-like
Thioredoxin_2	PF13098	361 - 450	1.5e-06	Thioredoxin-like domain
C1_2	PF03107	500 - 542	2.6e-08	C1 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001775)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G70480 AT1G70480
fragaria_vesca	FvH4_4g34241 FvH4_4g34250 FvH4_4g34260 FvH4_4g34260 FvH4_4g34260 FvH4_4g34260
malus_domestica	MD13G1093300.v1.1 MD13G1093500.v1.1 MD16G1094500.v1.1 MD16G1094600.v1.1 MD16G1094700.v1.1
prunus_persica	Prupe.1G251900_v2.0.a1 Prupe.1G252000_v2.0.a1
pyrus_communis	pycom13g08130 pycom13g08140 pycom16g08030 pycom16g08040 pycom16g08050
rosa_chinensis	RchiOBHm_Chr4g0443711 RchiOBHm_Chr6g0250421
rosa_laevigata	RLG00000005898 RLG00000005899 RLG00000005900
rosa_multiflora	Rmu_co8463221.1_g000001 Rmu_sc0001426.1_g000010 Rmu_sc0001426.1_g000011 Rmu_sc0001426.1_g000013 Rmu_sc0008739.1_g000001
rosa_roxburghii	Rroxscaffold_5G00384250 Rroxscaffold_5G00384260 Rroxscaffold_5G00384270
rosa_rugosa	Rorug05G0496400 Rorug05G0496500
rosa_samantha	Rh4AG406400 Rh4AG406500 Rh4AG406600 Rh4BG417400 Rh4BG417500 Rh4BG417600 Rh4BG417700 Rh4CG431900 Rh4DG413000
rosa_wichuraiana	Rw4G034900 Rw4G034910 Rw4G034920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	447
AccB1I	GGYRCC	3 cut(s)	447, 577, 1116
AccBSI	CCGCTC	1 cut(s)	1429
AccI	GTMKAC	2 cut(s)	195, 629
AccII	CGCG	1 cut(s)	461
AciI	CCGC	5 cut(s)	299, 459, 461, 497, 1429
AclWI	GGATC	1 cut(s)	1032
AcsI	RAATTY	3 cut(s)	360, 650, 1451
AfaI	GTAC	2 cut(s)	221, 449
AfiI	CCNNNNNNNGG	4 cut(s)	63, 184, 1312, 1682
AgsI	TTSAA	9 cut(s)	227, 349, 481, 596, 752, 902, 1193, 1312, 1489
AjnI	CCWGG	2 cut(s)	93, 198
AleI	CACNNNNGTG	1 cut(s)	1114
Alw21I	GWGCWC	4 cut(s)	837, 963, 1524, 1627
Alw26I	GTCTC	3 cut(s)	314, 589, 617
AlwI	GGATC	1 cut(s)	1032
Ama87I	CYCGRG	1 cut(s)	543
AoxI	GGCC	3 cut(s)	331, 867, 1475
ApeKI	GCWGC	2 cut(s)	46, 743
ApoI	RAATTY	3 cut(s)	360, 650, 1451
ArsI	GACNNNNNNTTYG	2 cut(s)	1586, 1618
Asp718I	GGTACC	1 cut(s)	447
AspS9I	GGNCC	7 cut(s)	158, 202, 331, 867, 1219, 1315, 1346
AsuHPI	GGTGA	5 cut(s)	29, 166, 448, 1289, 1712
AvaI	CYCGRG	1 cut(s)	543
AvaII	GGWCC	5 cut(s)	158, 202, 1219, 1315, 1346
BaeGI	GKGCMC	1 cut(s)	1121
BanI	GGYRCC	3 cut(s)	447, 577, 1116
BanII	GRGCYC	3 cut(s)	837, 963, 1677
Bbv12I	GWGCWC	4 cut(s)	837, 963, 1524, 1627
BbvI	GCAGC	2 cut(s)	33, 755
BccI	CCATC	8 cut(s)	560, 598, 866, 1456, 1544, 1620, 1680, 1691
BceAI	ACGGC	5 cut(s)	25, 37, 103, 274, 1113
BciT130I	CCWGG	2 cut(s)	95, 200
BcoDI	GTCTC	3 cut(s)	314, 589, 617
BfaI	CTAG	2 cut(s)	1209, 1350
BfmI	CTRYAG	1 cut(s)	417
BglII	AGATCT	2 cut(s)	1072, 1381
BisI	GCNGC	4 cut(s)	47, 498, 744, 1430
BlsI	GCNGC	4 cut(s)	48, 499, 745, 1431
Bme1390I	CCNGG	2 cut(s)	95, 200
Bme18I	GGWCC	5 cut(s)	158, 202, 1219, 1315, 1346
BmeT110I	CYCGRG	1 cut(s)	543
BmgT120I	GGNCC	7 cut(s)	158, 202, 331, 867, 1219, 1315, 1346
BmiI	GGNNCC	7 cut(s)	303, 449, 579, 868, 1118, 1220, 1645
BmrFI	CCNGG	2 cut(s)	95, 200
BmsI	GCATC	5 cut(s)	373, 1174, 1301, 1332, 1645
BpmI	CTGGAG	2 cut(s)	1022, 1649
BpuEI	CTTGAG	3 cut(s)	538, 1267, 1318
BsaBI	GATNNNNATC	1 cut(s)	1611
BsaI	GGTCTC	2 cut(s)	314, 617
BsaJI	CCNNGG	5 cut(s)	290, 459, 773, 1256, 1318
BsaWI	WCCGGW	1 cut(s)	1063
Bsc4I	CCNNNNNNNGG	4 cut(s)	63, 184, 1312, 1682
Bse1I	ACTGG	1 cut(s)	121
Bse3DI	GCAATG	1 cut(s)	782
Bse8I	GATNNNNATC	1 cut(s)	1611
BseBI	CCWGG	2 cut(s)	95, 200
BseDI	CCNNGG	5 cut(s)	290, 459, 773, 1256, 1318
BseGI	GGATG	6 cut(s)	1089, 1186, 1292, 1323, 1612, 1691
BseJI	GATNNNNATC	1 cut(s)	1611
BseLI	CCNNNNNNNGG	4 cut(s)	63, 184, 1312, 1682
BseMI	GCAATG	1 cut(s)	782
BseMII	CTCAG	5 cut(s)	936, 957, 1119, 1413, 1470
BseNI	ACTGG	1 cut(s)	121
BseRI	GAGGAG	6 cut(s)	65, 272, 506, 1439, 1520, 1646
BseSI	GKGCMC	1 cut(s)	1121
BseXI	GCAGC	2 cut(s)	33, 755
Bsh1236I	CGCG	1 cut(s)	461
Bsh1285I	CGRYCG	1 cut(s)	64
BshFI	GGCC	3 cut(s)	333, 869, 1477
BshNI	GGYRCC	3 cut(s)	447, 577, 1116
BsiEI	CGRYCG	1 cut(s)	64
BsiHKAI	GWGCWC	4 cut(s)	837, 963, 1524, 1627
BsiHKCI	CYCGRG	1 cut(s)	543
BsiSI	CCGG	3 cut(s)	57, 1064, 1664
BslFI	GGGAC	3 cut(s)	80, 427, 1232
BslI	CCNNNNNNNGG	4 cut(s)	63, 184, 1312, 1682
BsmAI	GTCTC	3 cut(s)	314, 589, 617
BsmFI	GGGAC	3 cut(s)	80, 427, 1232
BsmI	GAATGC	2 cut(s)	1257, 1498
BsnI	GGCC	3 cut(s)	333, 869, 1477
Bso31I	GGTCTC	2 cut(s)	314, 617
BsoBI	CYCGRG	1 cut(s)	543
Bsp1286I	GDGCHC	6 cut(s)	837, 963, 1121, 1524, 1627, 1677
Bsp143I	GATC	7 cut(s)	61, 102, 1024, 1072, 1167, 1381, 1606
Bsp19I	CCATGG	1 cut(s)	1256
BspACI	CCGC	5 cut(s)	299, 459, 461, 497, 1429
BspANI	GGCC	3 cut(s)	333, 869, 1477
BspCNI	CTCAG	5 cut(s)	937, 958, 1118, 1414, 1471
BspFNI	CGCG	1 cut(s)	461
BspLI	GGNNCC	7 cut(s)	303, 449, 579, 868, 1118, 1220, 1645
BspPI	GGATC	1 cut(s)	1032
BspQI	GCTCTTC	2 cut(s)	1272, 1665
BspT107I	GGYRCC	3 cut(s)	447, 577, 1116
BspTNI	GGTCTC	2 cut(s)	314, 617
BsrBI	CCGCTC	1 cut(s)	1429
BsrDI	GCAATG	1 cut(s)	782
BsrI	ACTGG	1 cut(s)	121
BssECI	CCNNGG	5 cut(s)	290, 459, 773, 1256, 1318
BssMI	GATC	7 cut(s)	61, 102, 1024, 1072, 1167, 1381, 1606
BssT1I	CCWWGG	3 cut(s)	773, 1256, 1318
Bst2UI	CCWGG	2 cut(s)	95, 200
Bst4CI	ACNGT	5 cut(s)	17, 418, 883, 1363, 1598
Bst6I	CTCTTC	3 cut(s)	247, 1272, 1665
BstC8I	GCNNGC	5 cut(s)	51, 297, 819, 963, 1263
BstDEI	CTNAG	6 cut(s)	501, 945, 966, 1105, 1422, 1479
BstDSI	CCRYGG	3 cut(s)	290, 459, 1256
BstF5I	GGATG	6 cut(s)	1089, 1186, 1292, 1323, 1612, 1691
BstFNI	CGCG	1 cut(s)	461
BstKTI	GATC	7 cut(s)	64, 105, 1027, 1075, 1170, 1384, 1609
BstMAI	GTCTC	3 cut(s)	314, 589, 617
BstMBI	GATC	7 cut(s)	61, 102, 1024, 1072, 1167, 1381, 1606
BstMCI	CGRYCG	1 cut(s)	64
BstMWI	GCNNNNNNNGC	2 cut(s)	962, 1125
BstNI	CCWGG	2 cut(s)	95, 200
BstNSI	RCATGY	1 cut(s)	772
BstSCI	CCNGG	2 cut(s)	93, 198
BstSFI	CTRYAG	1 cut(s)	417
BstSLI	GKGCMC	1 cut(s)	1121
BstUI	CGCG	1 cut(s)	461
BstV1I	GCAGC	2 cut(s)	33, 755
BstX2I	RGATCY	2 cut(s)	1072, 1381
BstYI	RGATCY	2 cut(s)	1072, 1381
BsuRI	GGCC	3 cut(s)	333, 869, 1477
BtgI	CCRYGG	3 cut(s)	290, 459, 1256
BtgZI	GCGATG	1 cut(s)	1710
BtsCI	GGATG	6 cut(s)	1089, 1186, 1292, 1323, 1612, 1691
BtsIMutI	CAGTG	2 cut(s)	402, 1419
Cac8I	GCNNGC	5 cut(s)	51, 297, 819, 963, 1263
Cfr13I	GGNCC	7 cut(s)	158, 202, 331, 867, 1219, 1315, 1346
Cfr42I	CCGCGG	1 cut(s)	462
CsiI	ACCWGGT	1 cut(s)	93
Csp6I	GTAC	2 cut(s)	220, 448
CspCI	CAANNNNNGTGG	4 cut(s)	168, 203, 648, 683
CviQI	GTAC	2 cut(s)	220, 448
DdeI	CTNAG	6 cut(s)	501, 945, 966, 1105, 1422, 1479
DpnI	GATC	7 cut(s)	63, 104, 1026, 1074, 1169, 1383, 1608
DpnII	GATC	7 cut(s)	61, 102, 1024, 1072, 1167, 1381, 1606
Eam1104I	CTCTTC	3 cut(s)	247, 1272, 1665
EarI	CTCTTC	3 cut(s)	247, 1272, 1665
Ecl136II	GAGCTC	2 cut(s)	835, 961
Eco130I	CCWWGG	3 cut(s)	773, 1256, 1318
Eco24I	GRGCYC	3 cut(s)	837, 963, 1677
Eco31I	GGTCTC	2 cut(s)	314, 617
Eco47I	GGWCC	5 cut(s)	158, 202, 1219, 1315, 1346
Eco53kI	GAGCTC	2 cut(s)	835, 961
Eco88I	CYCGRG	1 cut(s)	543
EcoICRI	GAGCTC	2 cut(s)	835, 961
EcoO109I	RGGNCCY	2 cut(s)	202, 331
EcoRI	GAATTC	2 cut(s)	360, 650
EcoRII	CCWGG	2 cut(s)	93, 198
EcoT14I	CCWWGG	3 cut(s)	773, 1256, 1318
EcoT22I	ATGCAT	2 cut(s)	647, 1189
EcoT38I	GRGCYC	3 cut(s)	837, 963, 1677
ErhI	CCWWGG	3 cut(s)	773, 1256, 1318
FalI	AAGNNNNNCTT	2 cut(s)	1280, 1312
FaqI	GGGAC	3 cut(s)	80, 427, 1232
FauNDI	CATATG	1 cut(s)	1544
FblI	GTMKAC	2 cut(s)	195, 629
Fnu4HI	GCNGC	4 cut(s)	47, 498, 744, 1430
FokI	GGATG	6 cut(s)	1076, 1193, 1279, 1310, 1599, 1698
FriOI	GRGCYC	3 cut(s)	837, 963, 1677
Fsp4HI	GCNGC	4 cut(s)	47, 498, 744, 1430
FspBI	CTAG	2 cut(s)	1209, 1350
GluI	GCNGC	4 cut(s)	47, 498, 744, 1430
GsuI	CTGGAG	2 cut(s)	1022, 1649
HaeIII	GGCC	3 cut(s)	333, 869, 1477
HapII	CCGG	3 cut(s)	57, 1064, 1664
HindIII	AAGCTT	2 cut(s)	1030, 1716
HinfI	GANTC	8 cut(s)	260, 508, 1004, 1053, 1060, 1280, 1300, 1308
HpaII	CCGG	3 cut(s)	57, 1064, 1664
HphI	GGTGA	5 cut(s)	29, 166, 448, 1289, 1712
Hpy166II	GTNNAC	3 cut(s)	196, 456, 630
Hpy188I	TCNGA	5 cut(s)	247, 283, 313, 589, 1072
Hpy188III	TCNNGA	9 cut(s)	32, 65, 478, 545, 1001, 1057, 1248, 1284, 1628
Hpy8I	GTNNAC	3 cut(s)	196, 456, 630
Hpy99I	CGWCG	2 cut(s)	17, 171
HpyAV	CCTTC	4 cut(s)	388, 590, 787, 1676
HpyCH4III	ACNGT	5 cut(s)	17, 418, 883, 1363, 1598
HpyCH4V	TGCA	6 cut(s)	645, 782, 956, 1187, 1496, 1557
HpyF10VI	GCNNNNNNNGC	2 cut(s)	962, 1125
HpyF3I	CTNAG	6 cut(s)	501, 945, 966, 1105, 1422, 1479
KpnI	GGTACC	1 cut(s)	451
KspI	CCGCGG	1 cut(s)	462
Kzo9I	GATC	7 cut(s)	61, 102, 1024, 1072, 1167, 1381, 1606
LguI	GCTCTTC	2 cut(s)	1272, 1665
LmnI	GCTCC	3 cut(s)	1400, 1426, 1507
Lsp1109I	GCAGC	2 cut(s)	33, 755
LweI	GCATC	5 cut(s)	373, 1174, 1301, 1332, 1645
MabI	ACCWGGT	1 cut(s)	93
MaeI	CTAG	2 cut(s)	1209, 1350
MaeIII	GTNAC	6 cut(s)	17, 80, 1211, 1277, 1363, 1598
MalI	GATC	7 cut(s)	63, 104, 1026, 1074, 1169, 1383, 1608
MbiI	CCGCTC	1 cut(s)	1429
MboI	GATC	7 cut(s)	61, 102, 1024, 1072, 1167, 1381, 1606
MflI	RGATCY	2 cut(s)	1072, 1381
MhlI	GDGCHC	6 cut(s)	837, 963, 1121, 1524, 1627, 1677
MluCI	AATT	5 cut(s)	360, 538, 650, 1008, 1451
MlyI	GAGTC	4 cut(s)	269, 1013, 1274, 1309
Mph1103I	ATGCAT	2 cut(s)	647, 1189
MseI	TTAA	4 cut(s)	810, 909, 1455, 1720
MslI	CAYNNNNRTG	3 cut(s)	891, 1114, 1328
MspA1I	CMGCKG	1 cut(s)	461
MspI	CCGG	3 cut(s)	57, 1064, 1664
MspR9I	CCNGG	2 cut(s)	95, 200
Mva1269I	GAATGC	2 cut(s)	1257, 1498
MvaI	CCWGG	2 cut(s)	95, 200
MvnI	CGCG	1 cut(s)	461
MwoI	GCNNNNNNNGC	2 cut(s)	962, 1125
NcoI	CCATGG	1 cut(s)	1256
NdeI	CATATG	1 cut(s)	1544
NdeII	GATC	7 cut(s)	61, 102, 1024, 1072, 1167, 1381, 1606
NlaIV	GGNNCC	7 cut(s)	303, 449, 579, 868, 1118, 1220, 1645
NmuCI	GTSAC	5 cut(s)	17, 1211, 1277, 1363, 1598
NsiI	ATGCAT	2 cut(s)	647, 1189
NspI	RCATGY	1 cut(s)	772
OliI	CACNNNNGTG	1 cut(s)	1114
PciSI	GCTCTTC	2 cut(s)	1272, 1665
PcsI	WCGNNNNNNNCGW	1 cut(s)	57
PctI	GAATGC	2 cut(s)	1257, 1498
PfeI	GAWTC	4 cut(s)	508, 1053, 1060, 1308
PkrI	GCNGC	4 cut(s)	48, 499, 745, 1431
Ple19I	CGATCG	1 cut(s)	64
PleI	GAGTC	4 cut(s)	268, 1012, 1274, 1308
PpsI	GAGTC	4 cut(s)	268, 1012, 1274, 1308
PpuMI	RGGWCCY	1 cut(s)	202
Psp124BI	GAGCTC	2 cut(s)	837, 963
Psp5II	RGGWCCY	1 cut(s)	202
Psp6I	CCWGG	2 cut(s)	93, 198
PspGI	CCWGG	2 cut(s)	93, 198
PspN4I	GGNNCC	7 cut(s)	303, 449, 579, 868, 1118, 1220, 1645
PspPI	GGNCC	7 cut(s)	158, 202, 331, 867, 1219, 1315, 1346
PspPPI	RGGWCCY	1 cut(s)	202
PsuI	RGATCY	2 cut(s)	1072, 1381
PvuI	CGATCG	1 cut(s)	64
RsaI	GTAC	2 cut(s)	221, 449
RsaNI	GTAC	2 cut(s)	220, 448
RseI	CAYNNNNRTG	3 cut(s)	891, 1114, 1328
SacI	GAGCTC	2 cut(s)	837, 963
SacII	CCGCGG	1 cut(s)	462
SapI	GCTCTTC	2 cut(s)	1272, 1665
SaqAI	TTAA	4 cut(s)	810, 909, 1455, 1720
SatI	GCNGC	4 cut(s)	47, 498, 744, 1430
Sau3AI	GATC	7 cut(s)	61, 102, 1024, 1072, 1167, 1381, 1606
Sau96I	GGNCC	7 cut(s)	158, 202, 331, 867, 1219, 1315, 1346
SchI	GAGTC	4 cut(s)	269, 1013, 1274, 1309
ScrFI	CCNGG	2 cut(s)	95, 200
SduI	GDGCHC	6 cut(s)	837, 963, 1121, 1524, 1627, 1677
SexAI	ACCWGGT	1 cut(s)	93
SfaNI	GCATC	5 cut(s)	373, 1174, 1301, 1332, 1645
SfcI	CTRYAG	1 cut(s)	417
Sfr303I	CCGCGG	1 cut(s)	462
SgrBI	CCGCGG	1 cut(s)	462
SinI	GGWCC	5 cut(s)	158, 202, 1219, 1315, 1346
SmiMI	CAYNNNNRTG	3 cut(s)	891, 1114, 1328
SmlI	CTYRAG	3 cut(s)	517, 1282, 1297
SmoI	CTYRAG	3 cut(s)	517, 1282, 1297
Sse9I	AATT	5 cut(s)	360, 538, 650, 1008, 1451
SsiI	CCGC	5 cut(s)	299, 459, 461, 497, 1429
SspMI	CTAG	2 cut(s)	1209, 1350
SstI	GAGCTC	2 cut(s)	837, 963
StyD4I	CCNGG	2 cut(s)	93, 198
StyI	CCWWGG	3 cut(s)	773, 1256, 1318
TaaI	ACNGT	5 cut(s)	17, 418, 883, 1363, 1598
TaqI	TCGA	2 cut(s)	560, 1233
TasI	AATT	5 cut(s)	360, 538, 650, 1008, 1451
TauI	GCSGC	2 cut(s)	500, 1432
TfiI	GAWTC	4 cut(s)	508, 1053, 1060, 1308
Tru1I	TTAA	4 cut(s)	810, 909, 1455, 1720
Tru9I	TTAA	4 cut(s)	810, 909, 1455, 1720
TscAI	CASTG	2 cut(s)	409, 1426
TseFI	GTSAC	5 cut(s)	17, 1211, 1277, 1363, 1598
TseI	GCWGC	2 cut(s)	46, 743
Tsp45I	GTSAC	5 cut(s)	17, 1211, 1277, 1363, 1598
TspDTI	ATGAA	4 cut(s)	753, 1192, 1385, 1531
TspGWI	ACGGA	2 cut(s)	68, 1065
TspRI	CASTG	2 cut(s)	409, 1426
VpaK11BI	GGWCC	5 cut(s)	158, 202, 1219, 1315, 1346
XapI	RAATTY	3 cut(s)	360, 650, 1451
XceI	RCATGY	1 cut(s)	772
XcmI	CCANNNNNNNNNTGG	1 cut(s)	814
XmiI	GTMKAC	2 cut(s)	195, 629
XspI	CTAG	2 cut(s)	1209, 1350
Zsp2I	ATGCAT	2 cut(s)	647, 1189

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.