Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0001775

Physical Location & Seq

Genomic Coordinates Reverse (-)

63737279 .. 63740168

Gene Structure 2890 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00384270.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1896 bp

ATGGCGGACGGTGAAGATTCCGGTGCTGTAGCCGCTGAGGTCATCAGGACTAGCACGCCTCTCGACTTCAAGACTCTTCTTTCTTCTCCGGCGAGGGACTTTCTTGTTCGCAACAATGGTGATCAGGTCTCCGGCGAGGTTAAGGTTGAAACCTTGCAGGGGAAGAAGCTGGGGTTGTATTTTTCTGCGTCCTGGTGCGGTCCATGTCAACGTTTCACCCCAGATTTGGTGGAGACCTACAATGCACTCGCTCCAAAAGGCGATTTCGAGGTGATCTTTATTTCAGCTGATGAGGATGAGGAGTCGTTCAATGGGTACTTCTCCAAGATGCCGTGGCTTGCAATTCCGTTTTCGGATTCTGAGGCACGTGATAGTCTGGATGAGCAGTTCAAGGTGAGAGGGATACCACATCTTGTGTTCCTTTCTGAAGAAGGGAGAGTTGAGAATGTCAGTGGAGTTGAGATTGTTCGGGAGTATGGAGCTGATGGCTACCCTTTTACCATAGAAAGGTCAAAAGAATTACAAGAACAAGAAGAGGCAGCTAAAAGGGAACAGTCTCTGAAAACAGTCCTGGTCTCCCGTTCACGCGACTTTGTAATTGCATCTGATGAGAAGAAGGTTCCTGTCTCTGAACTTGAAGGGAAGATGGTGGGTCTCTACTTCTCATTGTCTACATTCAGTCCATGCATAGAATTCACTCCAAAACTTGTGGAGGTTTATGAGAAGCTAAAAGCAAAGGGAGAGAGCTTTGAGATTGTGTTTATATCACTTGATGATGATGAAGAAGCATTTGCACAAGATTGTAAGAACATGCCTTGGTTTGCATTGCCCCAGAAGGACACCAAAACCATTGAGAAGTTGGCTCGGTATTTTGAGCTCTCAGCCTTACCCACTTTGGTTATTATTGGGGCAGATGGTAAAACTGTCCATAACAATGTTGTAGAAGCTATTGAAGAGCATGGGCTTCTGGCTTACCCCTTCACACCTGAGAAGTTTGCAGAGCTCGCTGAGATAGAGAAAGCGAAAGAGAAAGCACAAACTCTGGAGTCAATTTTGATTTCTGGGGATCAAAACTTTGTCATTGGAAAAGACGGAATCAAGATTCCGGTGTCAGATCTTGTGGGGAAGAACATCCTCCTTTATTTCTCAGCACATTGGTGCCCTCCATGCCGTGCCTTTCTACCAAAACTTATGGAAGCCTATCACAAGATCAAGGAAAAGGATGATGCATTTGAAGTTATTTTCATCTCTAGTGACAGGGACCAAGCCTCGTTCGATGACTTTTTCTCTGGAATGCCATGGCTTGCTCTTCCCTTTGGTGACTCAAGAAAGGCATCCTTGAGTCGCCGATTCAAGGTCCAAGGCATCCCCATGCTTGTAGCCATTGGTCCTACTGGTCAAACAGTCACAAAAGAAGCAAGAAATCTCGTTATGCTTCATGGAGCTAATGCTTATCCTTTCACTGAGGAGCGGCTGAAAGAGATAGAAGCAGAATTTGAGGAGATGGCAAAAAGGTGGCCTGAGAAGTTGAAGAATGCACTCCATGAGGAGCATGAGCTTGTGCTCTCTCGCCGAAGAAATTTTATATGTGATGGGTGCAACGAGAAAGGAGAGGTGTGGTCATTCTATTGCGAGGAGTGTGACTTTGATCTCCATCCAAAGTGTGCTTTGGAGGAGGAAAAGGGAACCAAAACTGATGCCAACCCGGAAGAAGATCCCCATCCAAAGTCTGCTTTGGAGGAGGAGAAGGGAACCAAAACTGATGTCAAGCCGGAAGAAGATCCCCATCCAAAGTGTGCTTTGGAGGAGGGAAAGGGAACCAAAACTGATGCCAAGCCGGAAGGAGAGCCCCAAGAAGGATGGGTATGCGATGGTGAAGTTTGTAAAAAAGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0001558 GO:0003006 GO:0003674 GO:0003824 GO:0004791 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006935 GO:0008150 GO:0008152 GO:0009605 GO:0009636 GO:0009653 GO:0009826 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0010035 GO:0010038 GO:0010183 GO:0010769 GO:0015036 GO:0016043 GO:0016049 GO:0016209 GO:0016491 GO:0016651 GO:0016667 GO:0016668 GO:0022414 GO:0022603 GO:0022604 GO:0030154 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0040008 GO:0040011 GO:0042221 GO:0042330 GO:0043900 GO:0044424 GO:0044444 GO:0044464 GO:0044706 GO:0045595 GO:0046686 GO:0048468 GO:0048588 GO:0048589 GO:0048638 GO:0048856 GO:0048868 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0050918 GO:0051128 GO:0051239 GO:0051510 GO:0051704 GO:0051716 GO:0055114 GO:0060284 GO:0060560 GO:0065007 GO:0070887 GO:0071840 GO:0080092 GO:0097237 GO:0098754 GO:0098869 GO:1990748 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

C1_2 Thioredoxin_8

Protein Analysis

631

Amino Acids

70.91

Weight (kDa)

4.81

Isoelectric Point (pI)

45.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AhpC-TSA	PF00578	30 - 147	2e-07	AhpC/TSA family
Redoxin	PF08534	46 - 150	2.9e-07	Redoxin
Thioredoxin_2	PF13098	53 - 152	4.2e-06	Thioredoxin-like domain
Thioredoxin_8	PF13905	54 - 147	1.2e-23	Thioredoxin-like
Thioredoxin_8	PF13905	214 - 307	2.5e-22	Thioredoxin-like
Redoxin	PF08534	362 - 455	1.3e-06	Redoxin
AhpC-TSA	PF00578	363 - 454	1.8e-08	AhpC/TSA family
Thioredoxin_8	PF13905	375 - 467	3.8e-27	Thioredoxin-like
Thioredoxin_2	PF13098	375 - 465	8.9e-07	Thioredoxin-like domain
C1_2	PF03107	514 - 556	1.2e-08	C1 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001775)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G70480 AT1G70480
fragaria_vesca	FvH4_4g34241 FvH4_4g34250 FvH4_4g34260 FvH4_4g34260 FvH4_4g34260 FvH4_4g34260
malus_domestica	MD13G1093300.v1.1 MD13G1093500.v1.1 MD16G1094500.v1.1 MD16G1094600.v1.1 MD16G1094700.v1.1
prunus_persica	Prupe.1G251900_v2.0.a1 Prupe.1G252000_v2.0.a1
pyrus_communis	pycom13g08130 pycom13g08140 pycom16g08030 pycom16g08040 pycom16g08050
rosa_chinensis	RchiOBHm_Chr4g0443711 RchiOBHm_Chr6g0250421
rosa_laevigata	RLG00000005898 RLG00000005899 RLG00000005900
rosa_multiflora	Rmu_co8463221.1_g000001 Rmu_sc0001426.1_g000010 Rmu_sc0001426.1_g000011 Rmu_sc0001426.1_g000013 Rmu_sc0008739.1_g000001
rosa_roxburghii	Rroxscaffold_5G00384250 Rroxscaffold_5G00384260 Rroxscaffold_5G00384270
rosa_rugosa	Rorug05G0496400 Rorug05G0496500
rosa_samantha	Rh4AG406400 Rh4AG406500 Rh4AG406600 Rh4BG417400 Rh4BG417500 Rh4BG417600 Rh4BG417700 Rh4CG431900 Rh4DG413000
rosa_wichuraiana	Rw4G034900 Rw4G034910 Rw4G034920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1158
AccBSI	CCGCTC	1 cut(s)	1471
AccI	GTMKAC	1 cut(s)	671
AccII	CGCG	1 cut(s)	588
AciI	CCGC	4 cut(s)	5, 33, 198, 1471
AclI	AACGTT	1 cut(s)	211
AclWI	GGATC	3 cut(s)	1074, 1709, 1775
AcsI	RAATTY	3 cut(s)	692, 1493, 1579
AcuI	CTGAAG	1 cut(s)	447
AcvI	CACGTG	1 cut(s)	368
AfaI	GTAC	1 cut(s)	317
AfiI	CCNNNNNNNGG	5 cut(s)	159, 226, 507, 1354, 1856
AgsI	TTSAA	9 cut(s)	70, 149, 310, 391, 638, 953, 1235, 1354, 1531
AjnI	CCWGG	2 cut(s)	191, 570
AleI	CACNNNNGTG	1 cut(s)	1156
AloI	GAACNNNNNNTCC	2 cut(s)	371, 403
Alw21I	GWGCWC	3 cut(s)	879, 1005, 1566
Alw26I	GTCTC	6 cut(s)	133, 227, 561, 580, 631, 659
AlwI	GGATC	3 cut(s)	1074, 1709, 1775
AlwNI	CAGNNNCTG	1 cut(s)	559
AoxI	GGCC	1 cut(s)	1517
ApeKI	GCWGC	1 cut(s)	539
ApoI	RAATTY	3 cut(s)	692, 1493, 1579
ArsI	GACNNNNNNTTYG	2 cut(s)	1749, 1781
AspS9I	GGNCC	4 cut(s)	200, 1261, 1357, 1388
AsuC2I	CCSGG	1 cut(s)	1706
AsuHPI	GGTGA	7 cut(s)	23, 131, 208, 283, 406, 1331, 1886
AvaII	GGWCC	4 cut(s)	200, 1261, 1357, 1388
BaeGI	GKGCMC	1 cut(s)	1163
BanI	GGYRCC	1 cut(s)	1158
BanII	GRGCYC	3 cut(s)	879, 1005, 1851
BbrPI	CACGTG	1 cut(s)	368
Bbv12I	GWGCWC	3 cut(s)	879, 1005, 1566
BbvCI	CCTCAGC	1 cut(s)	36
BbvI	GCAGC	1 cut(s)	551
BceAI	ACGGC	2 cut(s)	316, 1155
BcgI	CGANNNNNNTGC	2 cut(s)	43, 77
BciT130I	CCWGG	2 cut(s)	193, 572
BciVI	GTATCC	1 cut(s)	396
BclI	TGATCA	1 cut(s)	121
BcnI	CCSGG	1 cut(s)	1706
BcoDI	GTCTC	6 cut(s)	133, 227, 561, 580, 631, 659
BfaI	CTAG	2 cut(s)	51, 1251
BfmI	CTRYAG	1 cut(s)	27
BfuI	GTATCC	1 cut(s)	396
BglII	AGATCT	1 cut(s)	1114
BisI	GCNGC	3 cut(s)	33, 540, 1472
BlsI	GCNGC	3 cut(s)	34, 541, 1473
Bme1390I	CCNGG	3 cut(s)	193, 572, 1706
Bme18I	GGWCC	4 cut(s)	200, 1261, 1357, 1388
BmgT120I	GGNCC	4 cut(s)	200, 1261, 1357, 1388
BmiI	GGNNCC	6 cut(s)	621, 1160, 1262, 1687, 1753, 1819
BmrFI	CCNGG	3 cut(s)	193, 572, 1706
BmsI	GCATC	7 cut(s)	318, 611, 1216, 1343, 1374, 1687, 1819
BpmI	CTGGAG	1 cut(s)	1064
Bpu10I	CCTNAGC	1 cut(s)	36
BpuEI	CTTGAG	2 cut(s)	1309, 1360
BpuMI	CCSGG	1 cut(s)	1706
BsaAI	YACGTR	1 cut(s)	368
BsaBI	GATNNNNATC	3 cut(s)	1653, 1719, 1785
BsaI	GGTCTC	4 cut(s)	133, 227, 580, 659
BsaJI	CCNNGG	4 cut(s)	332, 815, 1298, 1360
BsaWI	WCCGGW	2 cut(s)	20, 1105
Bsc4I	CCNNNNNNNGG	5 cut(s)	159, 226, 507, 1354, 1856
Bse1I	ACTGG	1 cut(s)	1399
Bse3DI	GCAATG	1 cut(s)	824
Bse8I	GATNNNNATC	3 cut(s)	1653, 1719, 1785
BseBI	CCWGG	2 cut(s)	193, 572
BseDI	CCNNGG	4 cut(s)	332, 815, 1298, 1360
BseJI	GATNNNNATC	3 cut(s)	1653, 1719, 1785
BseLI	CCNNNNNNNGG	5 cut(s)	159, 226, 507, 1354, 1856
BseMI	GCAATG	1 cut(s)	824
BseMII	CTCAG	8 cut(s)	27, 351, 894, 978, 999, 1161, 1455, 1512
BseNI	ACTGG	1 cut(s)	1399
BseRI	GAGGAG	9 cut(s)	314, 1481, 1514, 1562, 1649, 1688, 1754, 1757, 1820
BseSI	GKGCMC	1 cut(s)	1163
BseXI	GCAGC	1 cut(s)	551
BseYI	CCCAGC	1 cut(s)	169
Bsh1236I	CGCG	1 cut(s)	588
BshFI	GGCC	1 cut(s)	1519
BshNI	GGYRCC	1 cut(s)	1158
BsiHKAI	GWGCWC	3 cut(s)	879, 1005, 1566
BsiSI	CCGG	7 cut(s)	21, 89, 132, 1106, 1706, 1772, 1838
BslFI	GGGAC	2 cut(s)	110, 1274
BslI	CCNNNNNNNGG	5 cut(s)	159, 226, 507, 1354, 1856
BsmAI	GTCTC	6 cut(s)	133, 227, 561, 580, 631, 659
BsmFI	GGGAC	2 cut(s)	110, 1274
BsmI	GAATGC	2 cut(s)	1299, 1540
BsnI	GGCC	1 cut(s)	1519
Bso31I	GGTCTC	4 cut(s)	133, 227, 580, 659
Bsp1286I	GDGCHC	5 cut(s)	879, 1005, 1163, 1566, 1851
Bsp143I	GATC	8 cut(s)	121, 273, 1066, 1114, 1209, 1648, 1714, 1780
Bsp19I	CCATGG	1 cut(s)	1298
BspACI	CCGC	4 cut(s)	5, 33, 198, 1471
BspANI	GGCC	1 cut(s)	1519
BspCNI	CTCAG	8 cut(s)	28, 352, 893, 979, 1000, 1160, 1456, 1513
BspFNI	CGCG	1 cut(s)	588
BspLI	GGNNCC	6 cut(s)	621, 1160, 1262, 1687, 1753, 1819
BspPI	GGATC	3 cut(s)	1074, 1709, 1775
BspQI	GCTCTTC	2 cut(s)	948, 1314
BspT107I	GGYRCC	1 cut(s)	1158
BspTNI	GGTCTC	4 cut(s)	133, 227, 580, 659
BsrBI	CCGCTC	1 cut(s)	1471
BsrDI	GCAATG	1 cut(s)	824
BsrI	ACTGG	1 cut(s)	1399
BssECI	CCNNGG	4 cut(s)	332, 815, 1298, 1360
BssMI	GATC	8 cut(s)	121, 273, 1066, 1114, 1209, 1648, 1714, 1780
BssT1I	CCWWGG	3 cut(s)	815, 1298, 1360
Bst2UI	CCWGG	2 cut(s)	193, 572
Bst4CI	ACNGT	5 cut(s)	11, 555, 568, 925, 1405
Bst6I	CTCTTC	4 cut(s)	81, 528, 948, 1314
BstBAI	YACGTR	1 cut(s)	368
BstC8I	GCNNGC	4 cut(s)	56, 339, 1005, 1305
BstDEI	CTNAG	8 cut(s)	36, 360, 880, 987, 1008, 1147, 1464, 1521
BstDSI	CCRYGG	2 cut(s)	332, 1298
BstFNI	CGCG	1 cut(s)	588
BstKTI	GATC	8 cut(s)	124, 276, 1069, 1117, 1212, 1651, 1717, 1783
BstMAI	GTCTC	6 cut(s)	133, 227, 561, 580, 631, 659
BstMBI	GATC	8 cut(s)	121, 273, 1066, 1114, 1209, 1648, 1714, 1780
BstMWI	GCNNNNNNNGC	3 cut(s)	32, 1004, 1167
BstNI	CCWGG	2 cut(s)	193, 572
BstNSI	RCATGY	1 cut(s)	814
BstSCI	CCNGG	3 cut(s)	191, 570, 1704
BstSFI	CTRYAG	1 cut(s)	27
BstSLI	GKGCMC	1 cut(s)	1163
BstUI	CGCG	1 cut(s)	588
BstV1I	GCAGC	1 cut(s)	551
BstX2I	RGATCY	3 cut(s)	1114, 1714, 1780
BstYI	RGATCY	3 cut(s)	1114, 1714, 1780
BsuI	GTATCC	1 cut(s)	396
BsuRI	GGCC	1 cut(s)	1519
BtgI	CCRYGG	2 cut(s)	332, 1298
BtgZI	GCGATG	1 cut(s)	1884
BtsIMutI	CAGTG	2 cut(s)	457, 1461
Cac8I	GCNNGC	4 cut(s)	56, 339, 1005, 1305
CaiI	CAGNNNCTG	1 cut(s)	559
Cfr13I	GGNCC	4 cut(s)	200, 1261, 1357, 1388
CseI	GACGC	1 cut(s)	177
Csp6I	GTAC	1 cut(s)	316
CspCI	CAANNNNNGTGG	2 cut(s)	690, 725
CviQI	GTAC	1 cut(s)	316
DdeI	CTNAG	8 cut(s)	36, 360, 880, 987, 1008, 1147, 1464, 1521
DpnI	GATC	8 cut(s)	123, 275, 1068, 1116, 1211, 1650, 1716, 1782
DpnII	GATC	8 cut(s)	121, 273, 1066, 1114, 1209, 1648, 1714, 1780
Eam1104I	CTCTTC	4 cut(s)	81, 528, 948, 1314
EarI	CTCTTC	4 cut(s)	81, 528, 948, 1314
EciI	GGCGGA	1 cut(s)	20
Ecl136II	GAGCTC	2 cut(s)	877, 1003
Eco130I	CCWWGG	3 cut(s)	815, 1298, 1360
Eco24I	GRGCYC	3 cut(s)	879, 1005, 1851
Eco31I	GGTCTC	4 cut(s)	133, 227, 580, 659
Eco47I	GGWCC	4 cut(s)	200, 1261, 1357, 1388
Eco53kI	GAGCTC	2 cut(s)	877, 1003
Eco57I	CTGAAG	1 cut(s)	447
Eco72I	CACGTG	1 cut(s)	368
EcoICRI	GAGCTC	2 cut(s)	877, 1003
EcoRI	GAATTC	1 cut(s)	692
EcoRII	CCWGG	2 cut(s)	191, 570
EcoT14I	CCWWGG	3 cut(s)	815, 1298, 1360
EcoT22I	ATGCAT	2 cut(s)	689, 1231
EcoT38I	GRGCYC	3 cut(s)	879, 1005, 1851
ErhI	CCWWGG	3 cut(s)	815, 1298, 1360
FalI	AAGNNNNNCTT	2 cut(s)	1322, 1354
FaqI	GGGAC	2 cut(s)	110, 1274
FbaI	TGATCA	1 cut(s)	121
FblI	GTMKAC	1 cut(s)	671
Fnu4HI	GCNGC	3 cut(s)	33, 540, 1472
FriOI	GRGCYC	3 cut(s)	879, 1005, 1851
Fsp4HI	GCNGC	3 cut(s)	33, 540, 1472
FspBI	CTAG	2 cut(s)	51, 1251
GluI	GCNGC	3 cut(s)	33, 540, 1472
GsaI	CCCAGC	1 cut(s)	173
GsuI	CTGGAG	1 cut(s)	1064
HaeIII	GGCC	1 cut(s)	1519
HapII	CCGG	7 cut(s)	21, 89, 132, 1106, 1706, 1772, 1838
HgaI	GACGC	1 cut(s)	177
HincII	GTYRAC	1 cut(s)	209
HindII	GTYRAC	1 cut(s)	209
HindIII	AAGCTT	1 cut(s)	1890
HpaII	CCGG	7 cut(s)	21, 89, 132, 1106, 1706, 1772, 1838
HphI	GGTGA	7 cut(s)	23, 131, 208, 283, 406, 1331, 1886
Hpy166II	GTNNAC	3 cut(s)	209, 584, 672
Hpy188I	TCNGA	7 cut(s)	355, 361, 427, 561, 607, 631, 1114
Hpy188III	TCNNGA	9 cut(s)	46, 62, 70, 377, 470, 1043, 1099, 1290, 1326
Hpy8I	GTNNAC	3 cut(s)	209, 584, 672
HpyAV	CCTTC	8 cut(s)	425, 610, 632, 829, 988, 1741, 1835, 1850
HpyCH4III	ACNGT	5 cut(s)	11, 555, 568, 925, 1405
HpyCH4IV	ACGT	2 cut(s)	211, 367
HpyF10VI	GCNNNNNNNGC	3 cut(s)	32, 1004, 1167
HpyF3I	CTNAG	8 cut(s)	36, 360, 880, 987, 1008, 1147, 1464, 1521
HpySE526I	ACGT	2 cut(s)	211, 367
Ksp22I	TGATCA	1 cut(s)	121
Kzo9I	GATC	8 cut(s)	121, 273, 1066, 1114, 1209, 1648, 1714, 1780
LguI	GCTCTTC	2 cut(s)	948, 1314
LmnI	GCTCC	5 cut(s)	256, 479, 1442, 1468, 1549
Lsp1109I	GCAGC	1 cut(s)	551
LweI	GCATC	7 cut(s)	318, 611, 1216, 1343, 1374, 1687, 1819
MaeI	CTAG	2 cut(s)	51, 1251
MaeII	ACGT	2 cut(s)	211, 367
MaeIII	GTNAC	4 cut(s)	1253, 1319, 1405, 1640
MalI	GATC	8 cut(s)	123, 275, 1068, 1116, 1211, 1650, 1716, 1782
MbiI	CCGCTC	1 cut(s)	1471
MboI	GATC	8 cut(s)	121, 273, 1066, 1114, 1209, 1648, 1714, 1780
MflI	RGATCY	3 cut(s)	1114, 1714, 1780
MhlI	GDGCHC	5 cut(s)	879, 1005, 1163, 1566, 1851
MluCI	AATT	7 cut(s)	342, 518, 597, 692, 1050, 1493, 1579
MlyI	GAGTC	5 cut(s)	67, 311, 1055, 1316, 1351
Mph1103I	ATGCAT	2 cut(s)	689, 1231
MseI	TTAA	1 cut(s)	141
MslI	CAYNNNNRTG	3 cut(s)	933, 1156, 1370
MspA1I	CMGCKG	2 cut(s)	35, 287
MspI	CCGG	7 cut(s)	21, 89, 132, 1106, 1706, 1772, 1838
MspR9I	CCNGG	3 cut(s)	193, 572, 1706
Mva1269I	GAATGC	2 cut(s)	1299, 1540
MvaI	CCWGG	2 cut(s)	193, 572
MvnI	CGCG	1 cut(s)	588
MwoI	GCNNNNNNNGC	3 cut(s)	32, 1004, 1167
NciI	CCSGG	1 cut(s)	1706
NcoI	CCATGG	1 cut(s)	1298
NdeII	GATC	8 cut(s)	121, 273, 1066, 1114, 1209, 1648, 1714, 1780
NlaIV	GGNNCC	6 cut(s)	621, 1160, 1262, 1687, 1753, 1819
NmuCI	GTSAC	4 cut(s)	1253, 1319, 1405, 1640
NsiI	ATGCAT	2 cut(s)	689, 1231
NspI	RCATGY	1 cut(s)	814
OliI	CACNNNNGTG	1 cut(s)	1156
PciSI	GCTCTTC	2 cut(s)	948, 1314
PctI	GAATGC	2 cut(s)	1299, 1540
PfeI	GAWTC	5 cut(s)	17, 356, 1095, 1102, 1350
PkrI	GCNGC	3 cut(s)	34, 541, 1473
PleI	GAGTC	5 cut(s)	67, 310, 1054, 1316, 1350
PmaCI	CACGTG	1 cut(s)	368
PmlI	CACGTG	1 cut(s)	368
PpsI	GAGTC	5 cut(s)	67, 310, 1054, 1316, 1350
Ppu21I	YACGTR	1 cut(s)	368
Psp124BI	GAGCTC	2 cut(s)	879, 1005
Psp1406I	AACGTT	1 cut(s)	211
Psp6I	CCWGG	2 cut(s)	191, 570
PspCI	CACGTG	1 cut(s)	368
PspFI	CCCAGC	1 cut(s)	169
PspGI	CCWGG	2 cut(s)	191, 570
PspN4I	GGNNCC	6 cut(s)	621, 1160, 1262, 1687, 1753, 1819
PspPI	GGNCC	4 cut(s)	200, 1261, 1357, 1388
PstNI	CAGNNNCTG	1 cut(s)	559
PsuI	RGATCY	3 cut(s)	1114, 1714, 1780
PvuII	CAGCTG	1 cut(s)	287
RsaI	GTAC	1 cut(s)	317
RsaNI	GTAC	1 cut(s)	316
RseI	CAYNNNNRTG	3 cut(s)	933, 1156, 1370
SacI	GAGCTC	2 cut(s)	879, 1005
SapI	GCTCTTC	2 cut(s)	948, 1314
SaqAI	TTAA	1 cut(s)	141
SatI	GCNGC	3 cut(s)	33, 540, 1472
Sau3AI	GATC	8 cut(s)	121, 273, 1066, 1114, 1209, 1648, 1714, 1780
Sau96I	GGNCC	4 cut(s)	200, 1261, 1357, 1388
SchI	GAGTC	5 cut(s)	67, 311, 1055, 1316, 1351
ScrFI	CCNGG	3 cut(s)	193, 572, 1706
SduI	GDGCHC	5 cut(s)	879, 1005, 1163, 1566, 1851
SfaNI	GCATC	7 cut(s)	318, 611, 1216, 1343, 1374, 1687, 1819
SfcI	CTRYAG	1 cut(s)	27
SinI	GGWCC	4 cut(s)	200, 1261, 1357, 1388
SmiMI	CAYNNNNRTG	3 cut(s)	933, 1156, 1370
SmlI	CTYRAG	2 cut(s)	1324, 1339
SmoI	CTYRAG	2 cut(s)	1324, 1339
Sse9I	AATT	7 cut(s)	342, 518, 597, 692, 1050, 1493, 1579
SsiI	CCGC	4 cut(s)	5, 33, 198, 1471
SspMI	CTAG	2 cut(s)	51, 1251
SstI	GAGCTC	2 cut(s)	879, 1005
StyD4I	CCNGG	3 cut(s)	191, 570, 1704
StyI	CCWWGG	3 cut(s)	815, 1298, 1360
TaaI	ACNGT	5 cut(s)	11, 555, 568, 925, 1405
TaiI	ACGT	2 cut(s)	214, 370
TaqI	TCGA	3 cut(s)	63, 267, 1275
TasI	AATT	7 cut(s)	342, 518, 597, 692, 1050, 1493, 1579
TauI	GCSGC	2 cut(s)	35, 1474
TfiI	GAWTC	5 cut(s)	17, 356, 1095, 1102, 1350
Tru1I	TTAA	1 cut(s)	141
Tru9I	TTAA	1 cut(s)	141
TscAI	CASTG	2 cut(s)	457, 1468
TseFI	GTSAC	4 cut(s)	1253, 1319, 1405, 1640
TseI	GCWGC	1 cut(s)	539
Tsp45I	GTSAC	4 cut(s)	1253, 1319, 1405, 1640
TspDTI	ATGAA	3 cut(s)	795, 1234, 1427
TspGWI	ACGGA	2 cut(s)	336, 1107
TspRI	CASTG	2 cut(s)	457, 1468
VpaK11BI	GGWCC	4 cut(s)	200, 1261, 1357, 1388
XapI	RAATTY	3 cut(s)	692, 1493, 1579
XceI	RCATGY	1 cut(s)	814
XcmI	CCANNNNNNNNNTGG	1 cut(s)	856
XmiI	GTMKAC	1 cut(s)	671
XspI	CTAG	2 cut(s)	51, 1251
Zsp2I	ATGCAT	2 cut(s)	689, 1231

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.