FvH4_5g31400

Belongs to the adenylate kinase family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Forward (+)
22315297 .. 22319824
4528 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g31400.t2

Sequence Viewer

Length: 903 bp
ATGGGTTGCCATGTAAATTTGGTACCCCATTCCATGGCCACAGTCTCAGCTCGCCCCAAGGCTCCTCCTCCTCTAACTCCTCCTCCCGCCGCGTGTTCCATTTCAAACCCACTCACCTCCTCCAATTCCCAATCCTCTTTCGTTTCCACATTCTCTCCCTCTCGCCACCAAACCCTAACTCCTCTTCGTTCCCGCAGAGCCATGAGCAACACGGGGGTGCGGTGTGGTTATAAGACTGAGCCGCTCAGGATTATGATCTCCGGGGCGCCGGCTTCGGGTAAAGGAACGCAATGCGAGCTCATTACAAAGAAATATGATTTGGTACATGTTGCTGCTGGTGACTTACTTAGAGCTGAAATTGCATCTGGGAGTGAAAATGGGAAGCGTGCAAGGGCGTACATGGACAAAGGACAATTGGTGCCAGATGAAATAGTTGTCATGATGGTGAAAGACCGCCTATCACAGCCAGATTCTCGAGAAAAAGGCTGGCTTTTGGATGGATACCCTAGGAGCTCATCGCAAGCAATTGCTCTTAAGGAATTCGACTTCGAGCCGGATCTTTTCATTCTTCTTGACGTTCCTGAAGATATTCTTGTTGACAGAGTTGTTGGAAGAAGGTTGGACCCTGTTACTGGAAAGATTTACCATCTGAAGTATTCTCCTCCAGAGACCCCAGAGATTGCTGCAAGGCTCACCCAACGTTTTGATGATACAGAAGAAAAGGTGAAACTTCGATTGCACACTCATCATCAGAATGTGGAGGCAGTACTTTCATTATACAAAGACATAACTCTTAAGGTGAACGGGAGTCTTACGAAGGATGATGTGTATGCCCAAATCGATGGTGTGCTGGTGAAGCTTCTTGAGAAAAAGCGGGCTACCTCTGAATCTTTGGCAGCTTAG

Protein Analysis

301

Amino Acids

33.03

Weight (kDa)

8.93

Isoelectric Point (pI)

52.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ADK PF00406 86 - 262 2.5e-49 Adenylate kinase
AAA_17 PF13207 88 - 206 1.6e-26 AAA domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 231
Acc65I GGTACC 1 cut(s) 22
AccB1I GGYRCC 3 cut(s) 22, 265, 418
AccB7I CCANNNNNTGG 1 cut(s) 34
AccBSI CCGCTC 1 cut(s) 244
AccII CGCG 1 cut(s) 92
AciI CCGC 7 cut(s) 87, 90, 193, 220, 242, 454, 874
AclI AACGTT 1 cut(s) 700
AclWI GGATC 1 cut(s) 564
AcoI YGGCCR 1 cut(s) 36
AcsI RAATTY 2 cut(s) 16, 539
AcuI CTGAAG 2 cut(s) 603, 671
AcyI GRCGYC 1 cut(s) 266
AfaI GTAC 4 cut(s) 24, 324, 398, 768
AfiI CCNNNNNNNGG 3 cut(s) 34, 275, 632
AflII CTTAAG 2 cut(s) 533, 794
AflIII ACRYGT 1 cut(s) 325
AgsI TTSAA 1 cut(s) 105
AjuI GAANNNNNNNTTGG 2 cut(s) 302, 334
AleI CACNNNNGTG 1 cut(s) 215
AluBI AGCT 6 cut(s) 50, 298, 353, 513, 859, 899
AluI AGCT 6 cut(s) 50, 298, 353, 513, 859, 899
Alw21I GWGCWC 2 cut(s) 300, 515
Alw26I GTCTC 2 cut(s) 49, 662
AlwI GGATC 1 cut(s) 564
Ama87I CYCGRG 1 cut(s) 474
AoxI GGCC 1 cut(s) 36
ApeKI GCWGC 3 cut(s) 332, 683, 896
ApoI RAATTY 2 cut(s) 16, 539
Asp700I GAANNNNTTC 1 cut(s) 588
Asp718I GGTACC 1 cut(s) 22
AspA2I CCTAGG 1 cut(s) 506
AspLEI GCGC 1 cut(s) 268
AspS9I GGNCC 1 cut(s) 622
AsuC2I CCSGG 1 cut(s) 262
AsuHPI GGTGA 7 cut(s) 106, 350, 457, 685, 736, 811, 865
AvaI CYCGRG 1 cut(s) 474
AvaII GGWCC 1 cut(s) 622
AvrII CCTAGG 1 cut(s) 506
BalI TGGCCA 1 cut(s) 38
BanI GGYRCC 3 cut(s) 22, 265, 418
BanII GRGCYC 2 cut(s) 300, 515
Bbv12I GWGCWC 2 cut(s) 300, 515
BbvI GCAGC 2 cut(s) 319, 670
BccI CCATC 4 cut(s) 436, 491, 654, 836
BciVI GTATCC 1 cut(s) 494
BcnI CCSGG 1 cut(s) 262
BcoDI GTCTC 2 cut(s) 49, 662
BfaI CTAG 1 cut(s) 507
BfoI RGCGCY 1 cut(s) 269
BfrI CTTAAG 2 cut(s) 533, 794
BfuI GTATCC 1 cut(s) 494
BisI GCNGC 5 cut(s) 90, 242, 333, 684, 897
BlnI CCTAGG 1 cut(s) 506
BlsI GCNGC 5 cut(s) 91, 243, 334, 685, 898
BmcAI AGTACT 1 cut(s) 768
Bme1390I CCNGG 1 cut(s) 262
Bme18I GGWCC 1 cut(s) 622
BmeT110I CYCGRG 1 cut(s) 474
BmgT120I GGNCC 1 cut(s) 622
BmiI GGNNCC 5 cut(s) 24, 63, 267, 420, 624
BmrFI CCNGG 1 cut(s) 262
BmsI GCATC 1 cut(s) 371
BpmI CTGGAG 1 cut(s) 648
Bpu10I CCTNAGC 1 cut(s) 245
BpuEI CTTGAG 1 cut(s) 884
BpuMI CCSGG 1 cut(s) 262
Bsa29I ATCGAT 1 cut(s) 840
BsaBI GATNNNNATC 1 cut(s) 254
BsaHI GRCGYC 1 cut(s) 266
BsaI GGTCTC 1 cut(s) 662
BsaJI CCNNGG 4 cut(s) 33, 57, 261, 506
BsaXI ACNNNNNCTCC 6 cut(s) 67, 97, 139, 163, 169, 193
Bsc4I CCNNNNNNNGG 3 cut(s) 34, 275, 632
Bse118I RCCGGY 1 cut(s) 268
Bse1I ACTGG 1 cut(s) 637
Bse3DI GCAATG 1 cut(s) 296
Bse8I GATNNNNATC 1 cut(s) 254
BseCI ATCGAT 1 cut(s) 840
BseDI CCNNGG 4 cut(s) 33, 57, 261, 506
BseGI GGATG 2 cut(s) 502, 826
BseJI GATNNNNATC 1 cut(s) 254
BseLI CCNNNNNNNGG 3 cut(s) 34, 275, 632
BseMI GCAATG 1 cut(s) 296
BseMII CTCAG 3 cut(s) 60, 228, 259
BseNI ACTGG 1 cut(s) 637
BseRI GAGGAG 8 cut(s) 54, 57, 60, 69, 72, 109, 171, 651
BseXI GCAGC 2 cut(s) 319, 670
Bsh1236I CGCG 1 cut(s) 92
BshFI GGCC 1 cut(s) 38
BshNI GGYRCC 3 cut(s) 22, 265, 418
BshVI ATCGAT 1 cut(s) 840
BsiHKAI GWGCWC 2 cut(s) 300, 515
BsiHKCI CYCGRG 1 cut(s) 474
BsiSI CCGG 3 cut(s) 261, 269, 554
BslI CCNNNNNNNGG 3 cut(s) 34, 275, 632
BsmAI GTCTC 2 cut(s) 49, 662
BsnI GGCC 1 cut(s) 38
Bso31I GGTCTC 1 cut(s) 662
BsoBI CYCGRG 1 cut(s) 474
Bsp1286I GDGCHC 2 cut(s) 300, 515
Bsp143I GATC 2 cut(s) 255, 556
Bsp19I CCATGG 1 cut(s) 33
BspACI CCGC 7 cut(s) 87, 90, 193, 220, 242, 454, 874
BspANI GGCC 1 cut(s) 38
BspCNI CTCAG 3 cut(s) 59, 229, 258
BspDI ATCGAT 1 cut(s) 840
BspFNI CGCG 1 cut(s) 92
BspHI TCATGA 1 cut(s) 438
BspLI GGNNCC 5 cut(s) 24, 63, 267, 420, 624
BspPI GGATC 1 cut(s) 564
BspT107I GGYRCC 3 cut(s) 22, 265, 418
BspTI CTTAAG 2 cut(s) 533, 794
BspTNI GGTCTC 1 cut(s) 662
BsrBI CCGCTC 1 cut(s) 244
BsrDI GCAATG 1 cut(s) 296
BsrFI RCCGGY 1 cut(s) 268
BsrI ACTGG 1 cut(s) 637
BssAI RCCGGY 1 cut(s) 268
BssECI CCNNGG 4 cut(s) 33, 57, 261, 506
BssMI GATC 2 cut(s) 255, 556
BssNI GRCGYC 1 cut(s) 266
BssT1I CCWWGG 3 cut(s) 33, 57, 506
Bst4CI ACNGT 1 cut(s) 43
Bst6I CTCTTC 1 cut(s) 189
BstACI GRCGYC 1 cut(s) 266
BstAFI CTTAAG 2 cut(s) 533, 794
BstC8I GCNNGC 7 cut(s) 52, 270, 296, 387, 488, 522, 876
BstDEI CTNAG 5 cut(s) 46, 237, 245, 347, 900
BstDSI CCRYGG 1 cut(s) 33
BstF5I GGATG 2 cut(s) 502, 826
BstFNI CGCG 1 cut(s) 92
BstH2I RGCGCY 1 cut(s) 269
BstHHI GCGC 1 cut(s) 268
BstKTI GATC 2 cut(s) 258, 559
BstMAI GTCTC 2 cut(s) 49, 662
BstMBI GATC 2 cut(s) 255, 556
BstMWI GCNNNNNNNGC 3 cut(s) 295, 359, 856
BstNSI RCATGY 1 cut(s) 329
BstSCI CCNGG 1 cut(s) 260
BstUI CGCG 1 cut(s) 92
BstV1I GCAGC 2 cut(s) 319, 670
BstX2I RGATCY 1 cut(s) 556
BstXI CCANNNNNNTGG 1 cut(s) 842
BstYI RGATCY 1 cut(s) 556
Bsu15I ATCGAT 1 cut(s) 840
BsuI GTATCC 1 cut(s) 494
BsuRI GGCC 1 cut(s) 38
BsuTUI ATCGAT 1 cut(s) 840
BtgI CCRYGG 1 cut(s) 33
BtgZI GCGATG 1 cut(s) 501
BtsCI GGATG 2 cut(s) 502, 826
Cac8I GCNNGC 7 cut(s) 52, 270, 296, 387, 488, 522, 876
CciI TCATGA 1 cut(s) 438
CfoI GCGC 1 cut(s) 268
Cfr10I RCCGGY 1 cut(s) 268
Cfr13I GGNCC 1 cut(s) 622
ClaI ATCGAT 1 cut(s) 840
Csp6I GTAC 4 cut(s) 23, 323, 397, 767
CviAII CATG 6 cut(s) 11, 34, 202, 326, 400, 439
CviQI GTAC 4 cut(s) 23, 323, 397, 767
DdeI CTNAG 5 cut(s) 46, 237, 245, 347, 900
DinI GGCGCC 1 cut(s) 267
DpnI GATC 2 cut(s) 257, 558
DpnII GATC 2 cut(s) 255, 556
EaeI YGGCCR 1 cut(s) 36
Eam1104I CTCTTC 1 cut(s) 189
EarI CTCTTC 1 cut(s) 189
Ecl136II GAGCTC 2 cut(s) 298, 513
Eco130I CCWWGG 3 cut(s) 33, 57, 506
Eco24I GRGCYC 2 cut(s) 300, 515
Eco31I GGTCTC 1 cut(s) 662
Eco47I GGWCC 1 cut(s) 622
Eco53kI GAGCTC 2 cut(s) 298, 513
Eco57I CTGAAG 2 cut(s) 603, 671
Eco88I CYCGRG 1 cut(s) 474
EcoICRI GAGCTC 2 cut(s) 298, 513
EcoRI GAATTC 1 cut(s) 539
EcoT14I CCWWGG 3 cut(s) 33, 57, 506
EcoT38I GRGCYC 2 cut(s) 300, 515
EgeI GGCGCC 1 cut(s) 267
EheI GGCGCC 1 cut(s) 267
ErhI CCWWGG 3 cut(s) 33, 57, 506
FaeI CATG 6 cut(s) 14, 37, 205, 329, 403, 442
FalI AAGNNNNNCTT 4 cut(s) 474, 506, 576, 608
FatI CATG 6 cut(s) 10, 33, 201, 325, 399, 438
FauI CCCGC 3 cut(s) 94, 200, 867
Fnu4HI GCNGC 5 cut(s) 90, 242, 333, 684, 897
FokI GGATG 2 cut(s) 509, 833
FriOI GRGCYC 2 cut(s) 300, 515
Fsp4HI GCNGC 5 cut(s) 90, 242, 333, 684, 897
FspBI CTAG 1 cut(s) 507
GlaI GCGC 1 cut(s) 267
GluI GCNGC 5 cut(s) 90, 242, 333, 684, 897
GsuI CTGGAG 1 cut(s) 648
HaeII RGCGCY 1 cut(s) 269
HaeIII GGCC 1 cut(s) 38
HapII CCGG 3 cut(s) 261, 269, 554
HhaI GCGC 1 cut(s) 268
Hin1I GRCGYC 1 cut(s) 266
Hin1II CATG 6 cut(s) 14, 37, 205, 329, 403, 442
Hin6I GCGC 1 cut(s) 266
HinP1I GCGC 1 cut(s) 266
HincII GTYRAC 1 cut(s) 598
HindII GTYRAC 1 cut(s) 598
HindIII AAGCTT 1 cut(s) 857
HinfI GANTC 3 cut(s) 470, 808, 887
HpaII CCGG 3 cut(s) 261, 269, 554
HphI GGTGA 7 cut(s) 106, 350, 457, 685, 736, 811, 865
Hpy166II GTNNAC 2 cut(s) 598, 802
Hpy188I TCNGA 3 cut(s) 651, 753, 886
Hpy188III TCNNGA 8 cut(s) 247, 439, 474, 476, 572, 581, 665, 863
Hpy8I GTNNAC 2 cut(s) 598, 802
HpyAV CCTTC 2 cut(s) 609, 811
HpyCH4III ACNGT 1 cut(s) 43
HpyCH4IV ACGT 2 cut(s) 576, 700
HpyCH4V TGCA 4 cut(s) 362, 389, 686, 739
HpyF10VI GCNNNNNNNGC 3 cut(s) 295, 359, 856
HpyF3I CTNAG 5 cut(s) 46, 237, 245, 347, 900
HpySE526I ACGT 2 cut(s) 576, 700
Hsp92I GRCGYC 1 cut(s) 266
Hsp92II CATG 6 cut(s) 14, 37, 205, 329, 403, 442
HspAI GCGC 1 cut(s) 266
KasI GGCGCC 1 cut(s) 265
KpnI GGTACC 1 cut(s) 26
KroI GCCGGC 1 cut(s) 268
KroNI GCCGGC 1 cut(s) 270
Kzo9I GATC 2 cut(s) 255, 556
LmnI GCTCC 2 cut(s) 67, 510
Lsp1109I GCAGC 2 cut(s) 319, 670
LweI GCATC 1 cut(s) 371
MaeI CTAG 1 cut(s) 507
MaeII ACGT 2 cut(s) 576, 700
MaeIII GTNAC 2 cut(s) 338, 628
MalI GATC 2 cut(s) 257, 558
MbiI CCGCTC 1 cut(s) 244
MboI GATC 2 cut(s) 255, 556
MboII GAAGA 5 cut(s) 176, 560, 596, 624, 728
MfeI CAATTG 2 cut(s) 413, 525
MflI RGATCY 1 cut(s) 556
MhlI GDGCHC 2 cut(s) 300, 515
MlsI TGGCCA 1 cut(s) 38
MluCI AATT 6 cut(s) 16, 124, 357, 413, 525, 539
MluNI TGGCCA 1 cut(s) 38
Mly113I GGCGCC 1 cut(s) 266
MlyI GAGTC 1 cut(s) 817
MmeI TCCRAC 2 cut(s) 589, 600
Mox20I TGGCCA 1 cut(s) 38
MroNI GCCGGC 1 cut(s) 268
MroXI GAANNNNTTC 1 cut(s) 588
MscI TGGCCA 1 cut(s) 38
MseI TTAA 2 cut(s) 534, 795
MslI CAYNNNNRTG 3 cut(s) 215, 443, 753
Msp20I TGGCCA 1 cut(s) 38
MspCI CTTAAG 2 cut(s) 533, 794
MspI CCGG 3 cut(s) 261, 269, 554
MspR9I CCNGG 1 cut(s) 262
MunI CAATTG 2 cut(s) 413, 525
MvnI CGCG 1 cut(s) 92
MwoI GCNNNNNNNGC 3 cut(s) 295, 359, 856
NaeI GCCGGC 1 cut(s) 270
NarI GGCGCC 1 cut(s) 266
NciI CCSGG 1 cut(s) 262
NcoI CCATGG 1 cut(s) 33
NdeII GATC 2 cut(s) 255, 556
NgoMIV GCCGGC 1 cut(s) 268
NlaIII CATG 6 cut(s) 14, 37, 205, 329, 403, 442
NlaIV GGNNCC 5 cut(s) 24, 63, 267, 420, 624
NmuCI GTSAC 1 cut(s) 338
NspI RCATGY 1 cut(s) 329
OliI CACNNNNGTG 1 cut(s) 215
PaeR7I CTCGAG 1 cut(s) 474
PagI TCATGA 1 cut(s) 438
PciI ACATGT 1 cut(s) 325
PdiI GCCGGC 1 cut(s) 270
PdmI GAANNNNTTC 1 cut(s) 588
PfeI GAWTC 2 cut(s) 470, 887
PflMI CCANNNNNTGG 1 cut(s) 34
PkrI GCNGC 5 cut(s) 91, 243, 334, 685, 898
PleI GAGTC 1 cut(s) 816
PluTI GGCGCC 1 cut(s) 269
PpsI GAGTC 1 cut(s) 816
PscI ACATGT 1 cut(s) 325
PsiI TTATAA 1 cut(s) 231
Psp124BI GAGCTC 2 cut(s) 300, 515
Psp1406I AACGTT 1 cut(s) 700
PspN4I GGNNCC 5 cut(s) 24, 63, 267, 420, 624
PspPI GGNCC 1 cut(s) 622
PsuI RGATCY 1 cut(s) 556
RsaI GTAC 4 cut(s) 24, 324, 398, 768
RsaNI GTAC 4 cut(s) 23, 323, 397, 767
RseI CAYNNNNRTG 3 cut(s) 215, 443, 753
SacI GAGCTC 2 cut(s) 300, 515
SaqAI TTAA 2 cut(s) 534, 795
SatI GCNGC 5 cut(s) 90, 242, 333, 684, 897
Sau3AI GATC 2 cut(s) 255, 556
Sau96I GGNCC 1 cut(s) 622
ScaI AGTACT 1 cut(s) 768
SchI GAGTC 1 cut(s) 817
ScrFI CCNGG 1 cut(s) 262
SduI GDGCHC 2 cut(s) 300, 515
SfaNI GCATC 1 cut(s) 371
SfoI GGCGCC 1 cut(s) 267
Sfr274I CTCGAG 1 cut(s) 474
SinI GGWCC 1 cut(s) 622
SlaI CTCGAG 1 cut(s) 474
SmiMI CAYNNNNRTG 3 cut(s) 215, 443, 753
SmlI CTYRAG 4 cut(s) 474, 533, 794, 863
SmoI CTYRAG 4 cut(s) 474, 533, 794, 863
Sse9I AATT 6 cut(s) 16, 124, 357, 413, 525, 539
SsiI CCGC 7 cut(s) 87, 90, 193, 220, 242, 454, 874
SspDI GGCGCC 1 cut(s) 265
SspMI CTAG 1 cut(s) 507
SstI GAGCTC 2 cut(s) 300, 515
StyD4I CCNGG 1 cut(s) 260
StyI CCWWGG 3 cut(s) 33, 57, 506
TaaI ACNGT 1 cut(s) 43
TaiI ACGT 2 cut(s) 579, 703
TaqI TCGA 5 cut(s) 475, 543, 549, 733, 840
TasI AATT 6 cut(s) 16, 124, 357, 413, 525, 539
TatI WGTACW 1 cut(s) 766
TauI GCSGC 2 cut(s) 92, 244
TfiI GAWTC 2 cut(s) 470, 887
Tru1I TTAA 2 cut(s) 534, 795
Tru9I TTAA 2 cut(s) 534, 795
TseFI GTSAC 1 cut(s) 338
TseI GCWGC 3 cut(s) 332, 683, 896
Tsp45I GTSAC 1 cut(s) 338
TspDTI ATGAA 3 cut(s) 441, 553, 762
Van91I CCANNNNNTGG 1 cut(s) 34
Vha464I CTTAAG 2 cut(s) 533, 794
VpaK11BI GGWCC 1 cut(s) 622
XapI RAATTY 2 cut(s) 16, 539
XceI RCATGY 1 cut(s) 329
XhoI CTCGAG 1 cut(s) 474
XmaJI CCTAGG 1 cut(s) 506
XmnI GAANNNNTTC 1 cut(s) 588
XspI CTAG 1 cut(s) 507
ZrmI AGTACT 1 cut(s) 768
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.