Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0002440

Physical Location & Seq

Genomic Coordinates Forward (+)

50560944 .. 50566108

Gene Structure 5165 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1404700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 909 bp

ATGGCTTGCAATGTAAGTGTAGTCCACCAAGCAATGGCATCCGCCGTAGCGCAGCCTAACAAAGCTCCTCCTCAGCTCCCCTGCGCACATCTGTCTTCGTCTTCCAATTCAAAGCCCAAGCCTTTCAAGCTCCTTCGATCCTCCCAATCTTCTTTCGCTTCCACCTTCTCCCCCTCTCGCCCTCAAACCCTAATTCCCTCTCGTTCCAGCAAAGCTCCCAATTTCCTGGTTGTAGGTTGTGGCAAGGTGGAGCCGCTAAGAATAATGATATCGGGGGCGCCTGCTTCCGGTAAAGGAACGCAGTGCCAGCTGATTACTCAGAAATATGGTTTAGTGCACGTCGCTGCTGGAGATTTACTTAGAGCAGAAATTGCTTCTGGGAGTGAAAATGGAAGGTGTGCAAGGGAGTACATGGAACAAGGAAAATTGGTTCCGGATGAAATAGTTGTCATGATGGTGAAAGACCGTCTATTGCAGCCAGATTCTCAAGAAAAAGGTTGGCTTTTGGATGGATACCCTAGGAGCTCATCGCAAGCAATTGCTCTTAAGGAATTAGGCTTCAAGCCGGATCTTTTCATTCTACTAGAAGTCACAGAAGATATTCTTGTTGAGAGAGTTGTTGGAAGAAGGTTAGATCCTATTACTGGAAAGATATATCATTTGAAGTATTCTCCGCCAGAGACCCAAGAGATAGCGTCAAGGCTCACCCAACGTTTTGACGATACAGAAGAAAAGGTGAAATTGCGATTACACACTCATCATCAGAATGTGAAGGCGGTACTTTCAATGTATGAAGACATAACAATTAATGGAAGTCATGCCAAGGAGGATGTGTTTGCCGAAATTGACAGCGCGCTGACTAGACTTGTTGAGAAAAGAAAGTCGACTTCAGAATCTCTGGCGGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004017 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009117 GO:0009123 GO:0009165 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016776 GO:0018130 GO:0019205 GO:0019438 GO:0019637 GO:0032501 GO:0034641 GO:0034654 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0046940 GO:0048871 GO:0050145 GO:0055086 GO:0065007 GO:0065008 GO:0071704 GO:0090407 GO:0097009 GO:1901293 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00230 ko00730 ko01100 ko01110 ko01130 map00230 map00730 map01100 map01110 map01130

Pfam Domains

Protein Families

ADK

Protein Analysis

303

Amino Acids

33.15

Weight (kDa)

8.87

Isoelectric Point (pI)

52.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ADK	PF00406	90 - 266	2.2e-48	Adenylate kinase
AAA_17	PF13207	92 - 210	3.5e-25	AAA domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002440)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G47840 AT5G47840
fragaria_vesca	FvH4_5g31400 FvH4_5g31400 FvH4_5g31400 FvH4_5g31400
malus_domestica	MD08G1217400.v1.1 MD15G1404700.v1.1
prunus_persica	Prupe.1G556600_v2.0.a1 Prupe.1G556600_v2.0.a1 Prupe.1G556600_v2.0.a1
pyrus_communis	pycom15g36210
rosa_chinensis	RchiOBHm_Chr1g0329011 RchiOBHm_Chr7g0223711 RchiOBHm_Chr7g0226671
rosa_laevigata	RLG00000001708 RLG00000009936 RLG00000032182 RLG00000032264 RLG00000034316 RLG00000035641 RLG00000036166
rosa_multiflora	Rmu_sc0001903.1_g000022 Rmu_sc0009538.1_g000003
rosa_roxburghii	Rroxscaffold_3G00232500
rosa_rugosa	Rorug07G0218900 Rorug07G0239100
rosa_samantha	Rh2DG023700 Rh4AG027300 Rh7AG361700 Rh7AG387100 Rh7BG353200 Rh7BG373300 Rh7CG380300 Rh7CG406300 Rh7DG357100 Rh7DG385400
rosa_wichuraiana	Rw2G034670 Rw5G032960 Rw7G030750 Rw7G032460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	85
AccB1I	GGYRCC	1 cut(s)	277
AccB7I	CCANNNNNTGG	1 cut(s)	34
AccI	GTMKAC	1 cut(s)	884
AccII	CGCG	1 cut(s)	854
AccIII	TCCGGA	1 cut(s)	433
AciI	CCGC	5 cut(s)	42, 254, 674, 776, 902
AclI	AACGTT	1 cut(s)	712
AclWI	GGATC	3 cut(s)	132, 576, 629
AcuI	CTGAAG	1 cut(s)	873
AcyI	GRCGYC	1 cut(s)	278
AfaI	GTAC	2 cut(s)	410, 780
AfiI	CCNNNNNNNGG	3 cut(s)	34, 287, 644
AflII	CTTAAG	1 cut(s)	545
AgsI	TTSAA	5 cut(s)	111, 127, 562, 664, 786
AjiI	CACGTC	1 cut(s)	340
AjnI	CCWGG	1 cut(s)	225
AloI	GAACNNNNNNTCC	2 cut(s)	414, 446
AluBI	AGCT	6 cut(s)	65, 76, 130, 215, 310, 525
AluI	AGCT	6 cut(s)	65, 76, 130, 215, 310, 525
Alw21I	GWGCWC	2 cut(s)	339, 527
Alw26I	GTCTC	1 cut(s)	674
Alw44I	GTGCAC	1 cut(s)	335
AlwI	GGATC	3 cut(s)	132, 576, 629
Aor13HI	TCCGGA	1 cut(s)	433
ApaLI	GTGCAC	1 cut(s)	335
ApeKI	GCWGC	3 cut(s)	52, 344, 475
AseI	ATTAAT	1 cut(s)	807
Asp700I	GAANNNNTTC	1 cut(s)	600
AspA2I	CCTAGG	1 cut(s)	518
AspLEI	GCGC	5 cut(s)	52, 86, 280, 854, 856
AsuHPI	GGTGA	3 cut(s)	469, 697, 748
AvrII	CCTAGG	1 cut(s)	518
BaeGI	GKGCMC	1 cut(s)	339
BanI	GGYRCC	1 cut(s)	277
BanII	GRGCYC	1 cut(s)	527
BbsI	GAAGAC	3 cut(s)	87, 93, 801
Bbv12I	GWGCWC	2 cut(s)	339, 527
BbvCI	CCTCAGC	1 cut(s)	72
BbvI	GCAGC	3 cut(s)	64, 331, 487
BccI	CCATC	2 cut(s)	448, 503
BceAI	ACGGC	1 cut(s)	29
BciT130I	CCWGG	1 cut(s)	227
BciVI	GTATCC	1 cut(s)	506
BcoDI	GTCTC	1 cut(s)	674
BfaI	CTAG	3 cut(s)	519, 584, 861
BfoI	RGCGCY	1 cut(s)	281
BfrI	CTTAAG	1 cut(s)	545
BfuI	GTATCC	1 cut(s)	506
BisI	GCNGC	5 cut(s)	53, 254, 345, 476, 903
BlnI	CCTAGG	1 cut(s)	518
BlsI	GCNGC	5 cut(s)	54, 255, 346, 477, 904
Bme1390I	CCNGG	1 cut(s)	227
BmgBI	CACGTC	1 cut(s)	340
BmiI	GGNNCC	3 cut(s)	252, 279, 432
BmrFI	CCNGG	1 cut(s)	227
BmsI	GCATC	1 cut(s)	47
BpiI	GAAGAC	3 cut(s)	87, 93, 801
BpmI	CTGGAG	1 cut(s)	369
Bpu10I	CCTNAGC	1 cut(s)	72
BpuEI	CTTGAG	1 cut(s)	471
BsaHI	GRCGYC	1 cut(s)	278
BsaI	GGTCTC	1 cut(s)	674
BsaJI	CCNNGG	2 cut(s)	518, 822
BsaWI	WCCGGW	2 cut(s)	287, 433
BsaXI	ACNNNNNCTCC	2 cut(s)	818, 848
Bsc4I	CCNNNNNNNGG	3 cut(s)	34, 287, 644
Bse1I	ACTGG	1 cut(s)	649
Bse3DI	GCAATG	2 cut(s)	16, 39
BseAI	TCCGGA	1 cut(s)	433
BseBI	CCWGG	1 cut(s)	227
BseDI	CCNNGG	2 cut(s)	518, 822
BseGI	GGATG	4 cut(s)	38, 442, 514, 835
BseLI	CCNNNNNNNGG	3 cut(s)	34, 287, 644
BseMI	GCAATG	2 cut(s)	16, 39
BseMII	CTCAG	2 cut(s)	86, 332
BseNI	ACTGG	1 cut(s)	649
BsePI	GCGCGC	1 cut(s)	852
BseRI	GAGGAG	2 cut(s)	57, 60
BseSI	GKGCMC	1 cut(s)	339
BseXI	GCAGC	3 cut(s)	64, 331, 487
Bsh1236I	CGCG	1 cut(s)	854
BshNI	GGYRCC	1 cut(s)	277
BsiHKAI	GWGCWC	2 cut(s)	339, 527
BsiSI	CCGG	3 cut(s)	288, 434, 566
BslI	CCNNNNNNNGG	3 cut(s)	34, 287, 644
BsmAI	GTCTC	1 cut(s)	674
Bso31I	GGTCTC	1 cut(s)	674
Bsp1286I	GDGCHC	2 cut(s)	339, 527
Bsp13I	TCCGGA	1 cut(s)	433
Bsp143I	GATC	3 cut(s)	137, 568, 634
BspACI	CCGC	5 cut(s)	42, 254, 674, 776, 902
BspCNI	CTCAG	2 cut(s)	85, 331
BspEI	TCCGGA	1 cut(s)	433
BspFNI	CGCG	1 cut(s)	854
BspHI	TCATGA	1 cut(s)	450
BspLI	GGNNCC	3 cut(s)	252, 279, 432
BspPI	GGATC	3 cut(s)	132, 576, 629
BspT107I	GGYRCC	1 cut(s)	277
BspTI	CTTAAG	1 cut(s)	545
BspTNI	GGTCTC	1 cut(s)	674
BsrDI	GCAATG	2 cut(s)	16, 39
BsrI	ACTGG	1 cut(s)	649
BssECI	CCNNGG	2 cut(s)	518, 822
BssHII	GCGCGC	1 cut(s)	852
BssMI	GATC	3 cut(s)	137, 568, 634
BssNI	GRCGYC	1 cut(s)	278
BssT1I	CCWWGG	2 cut(s)	518, 822
Bst2UI	CCWGG	1 cut(s)	227
Bst4CI	ACNGT	1 cut(s)	467
BstACI	GRCGYC	1 cut(s)	278
BstAFI	CTTAAG	1 cut(s)	545
BstAPI	GCANNNNNTGC	1 cut(s)	371
BstC8I	GCNNGC	5 cut(s)	7, 282, 308, 534, 854
BstDEI	CTNAG	4 cut(s)	72, 257, 318, 359
BstF5I	GGATG	4 cut(s)	38, 442, 514, 835
BstFNI	CGCG	1 cut(s)	854
BstH2I	RGCGCY	1 cut(s)	281
BstHHI	GCGC	5 cut(s)	52, 86, 280, 854, 856
BstKTI	GATC	3 cut(s)	140, 571, 637
BstMAI	GTCTC	1 cut(s)	674
BstMBI	GATC	3 cut(s)	137, 568, 634
BstMWI	GCNNNNNNNGC	3 cut(s)	127, 307, 371
BstNI	CCWGG	1 cut(s)	227
BstSCI	CCNGG	1 cut(s)	225
BstSLI	GKGCMC	1 cut(s)	339
BstUI	CGCG	1 cut(s)	854
BstV1I	GCAGC	3 cut(s)	64, 331, 487
BstV2I	GAAGAC	3 cut(s)	87, 93, 801
BstX2I	RGATCY	2 cut(s)	568, 634
BstXI	CCANNNNNNTGG	1 cut(s)	226
BstYI	RGATCY	2 cut(s)	568, 634
BsuI	GTATCC	1 cut(s)	506
BtgZI	GCGATG	1 cut(s)	513
BtrI	CACGTC	1 cut(s)	340
BtsCI	GGATG	4 cut(s)	38, 442, 514, 835
BtsI	GCAGTG	1 cut(s)	308
BtsIMutI	CAGTG	1 cut(s)	308
Cac8I	GCNNGC	5 cut(s)	7, 282, 308, 534, 854
CciI	TCATGA	1 cut(s)	450
CfoI	GCGC	5 cut(s)	52, 86, 280, 854, 856
CseI	GACGC	1 cut(s)	684
Csp6I	GTAC	2 cut(s)	409, 779
CviAII	CATG	3 cut(s)	412, 451, 818
CviQI	GTAC	2 cut(s)	409, 779
DdeI	CTNAG	4 cut(s)	72, 257, 318, 359
DinI	GGCGCC	1 cut(s)	279
DpnI	GATC	3 cut(s)	139, 570, 636
DpnII	GATC	3 cut(s)	137, 568, 634
EciI	GGCGGA	2 cut(s)	31, 663
Ecl136II	GAGCTC	1 cut(s)	525
Eco130I	CCWWGG	2 cut(s)	518, 822
Eco24I	GRGCYC	1 cut(s)	527
Eco31I	GGTCTC	1 cut(s)	674
Eco32I	GATATC	1 cut(s)	270
Eco53kI	GAGCTC	1 cut(s)	525
Eco57I	CTGAAG	1 cut(s)	873
EcoICRI	GAGCTC	1 cut(s)	525
EcoRII	CCWGG	1 cut(s)	225
EcoRV	GATATC	1 cut(s)	270
EcoT14I	CCWWGG	2 cut(s)	518, 822
EcoT38I	GRGCYC	1 cut(s)	527
EgeI	GGCGCC	1 cut(s)	279
EheI	GGCGCC	1 cut(s)	279
ErhI	CCWWGG	2 cut(s)	518, 822
FaeI	CATG	3 cut(s)	415, 454, 821
FaiI	YATR	8 cut(s)	327, 413, 452, 655, 792, 800, 819, 907
FalI	AAGNNNNNCTT	4 cut(s)	486, 518, 588, 620
FatI	CATG	3 cut(s)	411, 450, 817
FblI	GTMKAC	1 cut(s)	884
Fnu4HI	GCNGC	5 cut(s)	53, 254, 345, 476, 903
FokI	GGATG	4 cut(s)	25, 449, 521, 842
FriOI	GRGCYC	1 cut(s)	527
Fsp4HI	GCNGC	5 cut(s)	53, 254, 345, 476, 903
FspBI	CTAG	3 cut(s)	519, 584, 861
FspI	TGCGCA	1 cut(s)	85
GlaI	GCGC	5 cut(s)	51, 85, 279, 853, 855
GluI	GCNGC	5 cut(s)	53, 254, 345, 476, 903
GsuI	CTGGAG	1 cut(s)	369
HaeII	RGCGCY	1 cut(s)	281
HapII	CCGG	3 cut(s)	288, 434, 566
HgaI	GACGC	1 cut(s)	684
HhaI	GCGC	5 cut(s)	52, 86, 280, 854, 856
Hin1I	GRCGYC	1 cut(s)	278
Hin1II	CATG	3 cut(s)	415, 454, 821
Hin6I	GCGC	5 cut(s)	50, 84, 278, 852, 854
HinP1I	GCGC	5 cut(s)	50, 84, 278, 852, 854
HincII	GTYRAC	1 cut(s)	885
HindII	GTYRAC	1 cut(s)	885
HinfI	GANTC	2 cut(s)	482, 893
HpaII	CCGG	3 cut(s)	288, 434, 566
HphI	GGTGA	3 cut(s)	469, 697, 748
Hpy166II	GTNNAC	3 cut(s)	25, 337, 885
Hpy188I	TCNGA	3 cut(s)	321, 765, 892
Hpy188III	TCNNGA	3 cut(s)	434, 451, 488
Hpy8I	GTNNAC	3 cut(s)	25, 337, 885
Hpy99I	CGWCG	1 cut(s)	344
HpyAV	CCTTC	5 cut(s)	143, 175, 387, 621, 766
HpyCH4III	ACNGT	1 cut(s)	467
HpyCH4IV	ACGT	2 cut(s)	339, 712
HpyCH4V	TGCA	4 cut(s)	9, 337, 401, 475
HpyF10VI	GCNNNNNNNGC	3 cut(s)	127, 307, 371
HpyF3I	CTNAG	4 cut(s)	72, 257, 318, 359
HpySE526I	ACGT	2 cut(s)	339, 712
Hsp92I	GRCGYC	1 cut(s)	278
Hsp92II	CATG	3 cut(s)	415, 454, 821
HspAI	GCGC	5 cut(s)	50, 84, 278, 852, 854
KasI	GGCGCC	1 cut(s)	277
Kpn2I	TCCGGA	1 cut(s)	433
Kzo9I	GATC	3 cut(s)	137, 568, 634
LmnI	GCTCC	6 cut(s)	70, 81, 135, 220, 250, 522
Lsp1109I	GCAGC	3 cut(s)	64, 331, 487
LweI	GCATC	1 cut(s)	47
MaeI	CTAG	3 cut(s)	519, 584, 861
MaeII	ACGT	2 cut(s)	339, 712
MaeIII	GTNAC	1 cut(s)	589
MalI	GATC	3 cut(s)	139, 570, 636
MboI	GATC	3 cut(s)	137, 568, 634
MboII	GAAGA	7 cut(s)	87, 93, 141, 608, 636, 740, 806
MfeI	CAATTG	1 cut(s)	537
MflI	RGATCY	2 cut(s)	568, 634
MhlI	GDGCHC	2 cut(s)	339, 527
Mly113I	GGCGCC	1 cut(s)	278
MmeI	TCCRAC	1 cut(s)	601
MnlI	CCTC	7 cut(s)	78, 81, 151, 184, 192, 208, 820
MroI	TCCGGA	1 cut(s)	433
MroXI	GAANNNNTTC	1 cut(s)	600
MseI	TTAA	2 cut(s)	546, 807
MslI	CAYNNNNRTG	2 cut(s)	455, 765
MspA1I	CMGCKG	1 cut(s)	310
MspCI	CTTAAG	1 cut(s)	545
MspI	CCGG	3 cut(s)	288, 434, 566
MspR9I	CCNGG	1 cut(s)	227
MunI	CAATTG	1 cut(s)	537
MvaI	CCWGG	1 cut(s)	227
MvnI	CGCG	1 cut(s)	854
MwoI	GCNNNNNNNGC	3 cut(s)	127, 307, 371
NarI	GGCGCC	1 cut(s)	278
NdeII	GATC	3 cut(s)	137, 568, 634
NlaIII	CATG	3 cut(s)	415, 454, 821
NlaIV	GGNNCC	3 cut(s)	252, 279, 432
NmuCI	GTSAC	1 cut(s)	589
NsbI	TGCGCA	1 cut(s)	85
PagI	TCATGA	1 cut(s)	450
PauI	GCGCGC	1 cut(s)	852
PdmI	GAANNNNTTC	1 cut(s)	600
PfeI	GAWTC	2 cut(s)	482, 893
PflMI	CCANNNNNTGG	1 cut(s)	34
PkrI	GCNGC	5 cut(s)	54, 255, 346, 477, 904
PluTI	GGCGCC	1 cut(s)	281
PshBI	ATTAAT	1 cut(s)	807
Psp124BI	GAGCTC	1 cut(s)	527
Psp1406I	AACGTT	1 cut(s)	712
Psp6I	CCWGG	1 cut(s)	225
PspGI	CCWGG	1 cut(s)	225
PspN4I	GGNNCC	3 cut(s)	252, 279, 432
PsuI	RGATCY	2 cut(s)	568, 634
PteI	GCGCGC	1 cut(s)	852
PvuII	CAGCTG	1 cut(s)	310
RsaI	GTAC	2 cut(s)	410, 780
RsaNI	GTAC	2 cut(s)	409, 779
RseI	CAYNNNNRTG	2 cut(s)	455, 765
SacI	GAGCTC	1 cut(s)	527
SalI	GTCGAC	1 cut(s)	883
SaqAI	TTAA	2 cut(s)	546, 807
SatI	GCNGC	5 cut(s)	53, 254, 345, 476, 903
Sau3AI	GATC	3 cut(s)	137, 568, 634
ScrFI	CCNGG	1 cut(s)	227
SduI	GDGCHC	2 cut(s)	339, 527
SfaNI	GCATC	1 cut(s)	47
SfoI	GGCGCC	1 cut(s)	279
SmiMI	CAYNNNNRTG	2 cut(s)	455, 765
SmlI	CTYRAG	2 cut(s)	486, 545
SmoI	CTYRAG	2 cut(s)	486, 545
SsiI	CCGC	5 cut(s)	42, 254, 674, 776, 902
SspDI	GGCGCC	1 cut(s)	277
SspMI	CTAG	3 cut(s)	519, 584, 861
SstI	GAGCTC	1 cut(s)	527
StyD4I	CCNGG	1 cut(s)	225
StyI	CCWWGG	2 cut(s)	518, 822
TaaI	ACNGT	1 cut(s)	467
TaiI	ACGT	2 cut(s)	342, 715
TaqI	TCGA	2 cut(s)	136, 884
TatI	WGTACW	1 cut(s)	408
TauI	GCSGC	2 cut(s)	256, 905
TfiI	GAWTC	2 cut(s)	482, 893
Tru1I	TTAA	2 cut(s)	546, 807
Tru9I	TTAA	2 cut(s)	546, 807
TscAI	CASTG	1 cut(s)	308
TseFI	GTSAC	1 cut(s)	589
TseI	GCWGC	3 cut(s)	52, 344, 475
Tsp45I	GTSAC	1 cut(s)	589
TspDTI	ATGAA	3 cut(s)	453, 565, 807
TspRI	CASTG	1 cut(s)	308
Van91I	CCANNNNNTGG	1 cut(s)	34
Vha464I	CTTAAG	1 cut(s)	545
VneI	GTGCAC	1 cut(s)	335
VspI	ATTAAT	1 cut(s)	807
XmaJI	CCTAGG	1 cut(s)	518
XmiI	GTMKAC	1 cut(s)	884
XmnI	GAANNNNTTC	1 cut(s)	600
XspI	CTAG	3 cut(s)	519, 584, 861

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.