RLG00000001708

Belongs to the adenylate kinase family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Reverse (-)
19365218 .. 19368926
3709 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000001708

Sequence Viewer

Length: 906 bp
ATGGCTTGCCATGTCAATTTGGTTCCCCAATCCATGGCCACAGCGTCAGCTAAGCCCAAAGCTCCTCCTCCTCCTCCCGCCGCGTGTTCCATTTCAAAGCCATTCATCTCCGCAAAGCTTGTTCACTCGTCGCAATCCTCTTTCGTTTCCACCTTCTCTCCCTCTCGCCCTCAAACCCTAACTCCTCTCCGTTCCAGCAGACCTATGACTGACCTGGCGGTGCGGTGTGGTTCTAAGGCTGAGCCGCTCAGAATTATGATATCCGGGGCGCCTGCTTCGGGTAAAGGAACGCAATGCGAGCTCATTGCTCAGAAATATGATTTGGTACATGTCGCTGCTGGAGATTTACTTAGAGCGGAAATTGCATCTGGGAGTGAAAATGGGAAGCGTGCAAGGGCGTACATGGACAAAGGACAATTGGTGCCAGATGAAATAGTTGTCATGATGGTGAAAGAGCGTCTATTACAGCCAGATTCTCAAGAAAAGGGCTGGCTGTTGGATGGATACCCTAGGAGCTCATCGCAAGCAATTGCTCTTAAGGAATTCGGCTTTGAGCCGGATCTTTTCATTCTTCTTGACGTTCCTGAAGAGATTCTTGTTGATAGAGTAGTTGGAAGAAGGTTAGATCCTGTTACTGGAAAGATCTACCATCTGAAGTATTCTCCTCCAGAGACCCCCGAGATCGCGGCAAGGCTCACCCAGCGTTTTGATGATACAGAAGAAAAGGTGAAACTTCGATTGCACACTCATCATCAAAATGTGGAGGCAGTACTTTCATTATATGAAGACATAACCCTTAAGGTGGACGGGAGTGTTACCAAGGATGATGTGTTTGCCCAAATTGATGGCGCACTGGCAAAGCTTCTTGAGAAAAAGTGGGCTACCACAGAATCTTTGGCAGCTTAG

Protein Analysis

302

Amino Acids

32.91

Weight (kDa)

7.06

Isoelectric Point (pI)

54.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ADK PF00406 87 - 263 3.9e-49 Adenylate kinase
AAA_17 PF13207 89 - 207 8.4e-27 AAA domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 268, 421
AccB7I CCANNNNNTGG 1 cut(s) 34
AccBSI CCGCTC 2 cut(s) 247, 356
AccII CGCG 2 cut(s) 83, 686
AciI CCGC 8 cut(s) 78, 81, 111, 218, 223, 245, 356, 686
AclWI GGATC 2 cut(s) 567, 620
AcoI YGGCCR 1 cut(s) 36
AcsI RAATTY 1 cut(s) 542
AcuI CTGAAG 2 cut(s) 606, 674
AcyI GRCGYC 1 cut(s) 269
AfaI GTAC 3 cut(s) 327, 401, 771
AfiI CCNNNNNNNGG 4 cut(s) 34, 278, 635, 802
AflII CTTAAG 2 cut(s) 536, 797
AflIII ACRYGT 1 cut(s) 328
AgsI TTSAA 1 cut(s) 96
AjnI CCWGG 1 cut(s) 213
AjuI GAANNNNNNNTTGG 2 cut(s) 305, 337
AluBI AGCT 7 cut(s) 50, 62, 118, 301, 516, 862, 902
AluI AGCT 7 cut(s) 50, 62, 118, 301, 516, 862, 902
Alw21I GWGCWC 2 cut(s) 303, 518
Alw26I GTCTC 1 cut(s) 665
AlwI GGATC 2 cut(s) 567, 620
Ama87I CYCGRG 1 cut(s) 677
AoxI GGCC 1 cut(s) 36
ApeKI GCWGC 2 cut(s) 335, 899
ApoI RAATTY 1 cut(s) 542
Asp700I GAANNNNTTC 1 cut(s) 591
AspA2I CCTAGG 1 cut(s) 509
AspLEI GCGC 2 cut(s) 271, 851
AsuC2I CCSGG 1 cut(s) 265
AsuHPI GGTGA 3 cut(s) 460, 688, 739
AvaI CYCGRG 1 cut(s) 677
AvrII CCTAGG 1 cut(s) 509
BalI TGGCCA 1 cut(s) 38
BanI GGYRCC 2 cut(s) 268, 421
BanII GRGCYC 2 cut(s) 303, 518
BbsI GAAGAC 1 cut(s) 792
Bbv12I GWGCWC 2 cut(s) 303, 518
BbvI GCAGC 1 cut(s) 322
BccI CCATC 4 cut(s) 439, 494, 657, 839
BcgI CGANNNNNNTGC 2 cut(s) 287, 321
BciT130I CCWGG 1 cut(s) 215
BciVI GTATCC 1 cut(s) 497
BcnI CCSGG 1 cut(s) 265
BcoDI GTCTC 1 cut(s) 665
BfaI CTAG 1 cut(s) 510
BfoI RGCGCY 1 cut(s) 272
BfrI CTTAAG 2 cut(s) 536, 797
BfuI GTATCC 1 cut(s) 497
BglII AGATCT 1 cut(s) 642
BisI GCNGC 5 cut(s) 81, 245, 336, 687, 900
BlnI CCTAGG 1 cut(s) 509
BlpI GCTNAGC 2 cut(s) 51, 240
BlsI GCNGC 5 cut(s) 82, 246, 337, 688, 901
BmcAI AGTACT 1 cut(s) 771
Bme1390I CCNGG 2 cut(s) 215, 265
BmeT110I CYCGRG 1 cut(s) 677
BmiI GGNNCC 3 cut(s) 24, 270, 423
BmrFI CCNGG 2 cut(s) 215, 265
BmsI GCATC 1 cut(s) 374
BpiI GAAGAC 1 cut(s) 792
BpmI CTGGAG 2 cut(s) 360, 651
Bpu1102I GCTNAGC 2 cut(s) 51, 240
BpuEI CTTGAG 2 cut(s) 462, 887
BpuMI CCSGG 1 cut(s) 265
BsaHI GRCGYC 1 cut(s) 269
BsaI GGTCTC 1 cut(s) 665
BsaJI CCNNGG 4 cut(s) 33, 264, 509, 819
BsaXI ACNNNNNCTCC 4 cut(s) 142, 166, 172, 196
Bsc4I CCNNNNNNNGG 4 cut(s) 34, 278, 635, 802
Bse1I ACTGG 2 cut(s) 640, 858
Bse3DI GCAATG 2 cut(s) 299, 303
BseBI CCWGG 1 cut(s) 215
BseDI CCNNGG 4 cut(s) 33, 264, 509, 819
BseGI GGATG 2 cut(s) 505, 829
BseLI CCNNNNNNNGG 4 cut(s) 34, 278, 635, 802
BseMI GCAATG 2 cut(s) 299, 303
BseMII CTCAG 3 cut(s) 231, 262, 323
BseNI ACTGG 2 cut(s) 640, 858
BseRI GAGGAG 6 cut(s) 54, 57, 60, 63, 174, 654
BseXI GCAGC 1 cut(s) 322
BseYI CCCAGC 1 cut(s) 699
Bsh1236I CGCG 2 cut(s) 83, 686
BshFI GGCC 1 cut(s) 38
BshNI GGYRCC 2 cut(s) 268, 421
BsiHKAI GWGCWC 2 cut(s) 303, 518
BsiHKCI CYCGRG 1 cut(s) 677
BsiSI CCGG 2 cut(s) 264, 557
BslI CCNNNNNNNGG 4 cut(s) 34, 278, 635, 802
BsmAI GTCTC 1 cut(s) 665
BsnI GGCC 1 cut(s) 38
Bso31I GGTCTC 1 cut(s) 665
BsoBI CYCGRG 1 cut(s) 677
Bsp1286I GDGCHC 2 cut(s) 303, 518
Bsp143I GATC 4 cut(s) 559, 625, 642, 681
Bsp1720I GCTNAGC 2 cut(s) 51, 240
Bsp19I CCATGG 1 cut(s) 33
BspACI CCGC 8 cut(s) 78, 81, 111, 218, 223, 245, 356, 686
BspANI GGCC 1 cut(s) 38
BspCNI CTCAG 3 cut(s) 232, 261, 322
BspFNI CGCG 2 cut(s) 83, 686
BspHI TCATGA 1 cut(s) 441
BspLI GGNNCC 3 cut(s) 24, 270, 423
BspPI GGATC 2 cut(s) 567, 620
BspT107I GGYRCC 2 cut(s) 268, 421
BspTI CTTAAG 2 cut(s) 536, 797
BspTNI GGTCTC 1 cut(s) 665
BsrBI CCGCTC 2 cut(s) 247, 356
BsrDI GCAATG 2 cut(s) 299, 303
BsrI ACTGG 2 cut(s) 640, 858
BssECI CCNNGG 4 cut(s) 33, 264, 509, 819
BssMI GATC 4 cut(s) 559, 625, 642, 681
BssNI GRCGYC 1 cut(s) 269
BssT1I CCWWGG 3 cut(s) 33, 509, 819
Bst2UI CCWGG 1 cut(s) 215
Bst6I CTCTTC 1 cut(s) 582
BstACI GRCGYC 1 cut(s) 269
BstAFI CTTAAG 2 cut(s) 536, 797
BstC8I GCNNGC 6 cut(s) 7, 273, 299, 390, 491, 525
BstDEI CTNAG 7 cut(s) 51, 234, 240, 248, 309, 350, 903
BstDSI CCRYGG 1 cut(s) 33
BstF5I GGATG 2 cut(s) 505, 829
BstFNI CGCG 2 cut(s) 83, 686
BstH2I RGCGCY 1 cut(s) 272
BstHHI GCGC 2 cut(s) 271, 851
BstKTI GATC 4 cut(s) 562, 628, 645, 684
BstMAI GTCTC 1 cut(s) 665
BstMBI GATC 4 cut(s) 559, 625, 642, 681
BstMWI GCNNNNNNNGC 3 cut(s) 298, 362, 700
BstNI CCWGG 1 cut(s) 215
BstNSI RCATGY 1 cut(s) 332
BstSCI CCNGG 2 cut(s) 213, 263
BstUI CGCG 2 cut(s) 83, 686
BstV1I GCAGC 1 cut(s) 322
BstV2I GAAGAC 1 cut(s) 792
BstX2I RGATCY 3 cut(s) 559, 625, 642
BstXI CCANNNNNNTGG 1 cut(s) 845
BstYI RGATCY 3 cut(s) 559, 625, 642
BsuI GTATCC 1 cut(s) 497
BsuRI GGCC 1 cut(s) 38
BtgI CCRYGG 1 cut(s) 33
BtgZI GCGATG 1 cut(s) 504
BtsCI GGATG 2 cut(s) 505, 829
BtsIMutI CAGTG 1 cut(s) 851
Cac8I GCNNGC 6 cut(s) 7, 273, 299, 390, 491, 525
CciI TCATGA 1 cut(s) 441
CfoI GCGC 2 cut(s) 271, 851
CseI GACGC 2 cut(s) 33, 446
Csp6I GTAC 3 cut(s) 326, 400, 770
CviAII CATG 5 cut(s) 11, 34, 329, 403, 442
CviQI GTAC 3 cut(s) 326, 400, 770
DdeI CTNAG 7 cut(s) 51, 234, 240, 248, 309, 350, 903
DinI GGCGCC 1 cut(s) 270
DpnI GATC 4 cut(s) 561, 627, 644, 683
DpnII GATC 4 cut(s) 559, 625, 642, 681
EaeI YGGCCR 1 cut(s) 36
Eam1104I CTCTTC 1 cut(s) 582
EarI CTCTTC 1 cut(s) 582
Ecl136II GAGCTC 2 cut(s) 301, 516
Eco130I CCWWGG 3 cut(s) 33, 509, 819
Eco24I GRGCYC 2 cut(s) 303, 518
Eco31I GGTCTC 1 cut(s) 665
Eco32I GATATC 1 cut(s) 261
Eco53kI GAGCTC 2 cut(s) 301, 516
Eco57I CTGAAG 2 cut(s) 606, 674
Eco88I CYCGRG 1 cut(s) 677
EcoICRI GAGCTC 2 cut(s) 301, 516
EcoRI GAATTC 1 cut(s) 542
EcoRII CCWGG 1 cut(s) 213
EcoRV GATATC 1 cut(s) 261
EcoT14I CCWWGG 3 cut(s) 33, 509, 819
EcoT38I GRGCYC 2 cut(s) 303, 518
EgeI GGCGCC 1 cut(s) 270
EheI GGCGCC 1 cut(s) 270
ErhI CCWWGG 3 cut(s) 33, 509, 819
FaeI CATG 5 cut(s) 14, 37, 332, 406, 445
FalI AAGNNNNNCTT 2 cut(s) 579, 611
FatI CATG 5 cut(s) 10, 33, 328, 402, 441
FauI CCCGC 1 cut(s) 85
Fnu4HI GCNGC 5 cut(s) 81, 245, 336, 687, 900
FokI GGATG 2 cut(s) 512, 836
FriOI GRGCYC 2 cut(s) 303, 518
Fsp4HI GCNGC 5 cut(s) 81, 245, 336, 687, 900
FspBI CTAG 1 cut(s) 510
GlaI GCGC 2 cut(s) 270, 850
GluI GCNGC 5 cut(s) 81, 245, 336, 687, 900
GsaI CCCAGC 1 cut(s) 703
GsuI CTGGAG 2 cut(s) 360, 651
HaeII RGCGCY 1 cut(s) 272
HaeIII GGCC 1 cut(s) 38
HapII CCGG 2 cut(s) 264, 557
HgaI GACGC 2 cut(s) 33, 446
HhaI GCGC 2 cut(s) 271, 851
Hin1I GRCGYC 1 cut(s) 269
Hin1II CATG 5 cut(s) 14, 37, 332, 406, 445
Hin6I GCGC 2 cut(s) 269, 849
HinP1I GCGC 2 cut(s) 269, 849
HindIII AAGCTT 2 cut(s) 116, 860
HinfI GANTC 3 cut(s) 473, 592, 890
HpaII CCGG 2 cut(s) 264, 557
HphI GGTGA 3 cut(s) 460, 688, 739
Hpy166II GTNNAC 2 cut(s) 124, 805
Hpy188I TCNGA 3 cut(s) 251, 312, 654
Hpy188III TCNNGA 6 cut(s) 442, 479, 575, 584, 668, 866
Hpy8I GTNNAC 2 cut(s) 124, 805
Hpy99I CGWCG 1 cut(s) 133
HpyAV CCTTC 2 cut(s) 163, 612
HpyCH4IV ACGT 1 cut(s) 579
HpyCH4V TGCA 3 cut(s) 365, 392, 742
HpyF10VI GCNNNNNNNGC 3 cut(s) 298, 362, 700
HpyF3I CTNAG 7 cut(s) 51, 234, 240, 248, 309, 350, 903
HpySE526I ACGT 1 cut(s) 579
Hsp92I GRCGYC 1 cut(s) 269
Hsp92II CATG 5 cut(s) 14, 37, 332, 406, 445
HspAI GCGC 2 cut(s) 269, 849
KasI GGCGCC 1 cut(s) 268
Kzo9I GATC 4 cut(s) 559, 625, 642, 681
LmnI GCTCC 2 cut(s) 67, 513
Lsp1109I GCAGC 1 cut(s) 322
LweI GCATC 1 cut(s) 374
MaeI CTAG 1 cut(s) 510
MaeII ACGT 1 cut(s) 579
MaeIII GTNAC 2 cut(s) 631, 814
MalI GATC 4 cut(s) 561, 627, 644, 683
MbiI CCGCTC 2 cut(s) 247, 356
MboI GATC 4 cut(s) 559, 625, 642, 681
MboII GAAGA 5 cut(s) 563, 599, 627, 731, 797
MfeI CAATTG 2 cut(s) 416, 528
MflI RGATCY 3 cut(s) 559, 625, 642
MhlI GDGCHC 2 cut(s) 303, 518
MlsI TGGCCA 1 cut(s) 38
MluCI AATT 7 cut(s) 16, 252, 360, 416, 528, 542, 840
MluNI TGGCCA 1 cut(s) 38
Mly113I GGCGCC 1 cut(s) 269
MmeI TCCRAC 2 cut(s) 477, 592
Mox20I TGGCCA 1 cut(s) 38
MroXI GAANNNNTTC 1 cut(s) 591
MscI TGGCCA 1 cut(s) 38
MseI TTAA 2 cut(s) 537, 798
MslI CAYNNNNRTG 2 cut(s) 446, 756
Msp20I TGGCCA 1 cut(s) 38
MspCI CTTAAG 2 cut(s) 536, 797
MspI CCGG 2 cut(s) 264, 557
MspR9I CCNGG 2 cut(s) 215, 265
MunI CAATTG 2 cut(s) 416, 528
MvaI CCWGG 1 cut(s) 215
MvnI CGCG 2 cut(s) 83, 686
MwoI GCNNNNNNNGC 3 cut(s) 298, 362, 700
NarI GGCGCC 1 cut(s) 269
NciI CCSGG 1 cut(s) 265
NcoI CCATGG 1 cut(s) 33
NdeII GATC 4 cut(s) 559, 625, 642, 681
NlaIII CATG 5 cut(s) 14, 37, 332, 406, 445
NlaIV GGNNCC 3 cut(s) 24, 270, 423
NspI RCATGY 1 cut(s) 332
PagI TCATGA 1 cut(s) 441
PciI ACATGT 1 cut(s) 328
PdmI GAANNNNTTC 1 cut(s) 591
PfeI GAWTC 3 cut(s) 473, 592, 890
PflMI CCANNNNNTGG 1 cut(s) 34
PkrI GCNGC 5 cut(s) 82, 246, 337, 688, 901
PluTI GGCGCC 1 cut(s) 272
PscI ACATGT 1 cut(s) 328
Psp124BI GAGCTC 2 cut(s) 303, 518
Psp6I CCWGG 1 cut(s) 213
PspFI CCCAGC 1 cut(s) 699
PspGI CCWGG 1 cut(s) 213
PspN4I GGNNCC 3 cut(s) 24, 270, 423
PsuI RGATCY 3 cut(s) 559, 625, 642
RsaI GTAC 3 cut(s) 327, 401, 771
RsaNI GTAC 3 cut(s) 326, 400, 770
RseI CAYNNNNRTG 2 cut(s) 446, 756
SacI GAGCTC 2 cut(s) 303, 518
SaqAI TTAA 2 cut(s) 537, 798
SatI GCNGC 5 cut(s) 81, 245, 336, 687, 900
Sau3AI GATC 4 cut(s) 559, 625, 642, 681
ScaI AGTACT 1 cut(s) 771
ScrFI CCNGG 2 cut(s) 215, 265
SduI GDGCHC 2 cut(s) 303, 518
SfaNI GCATC 1 cut(s) 374
SfoI GGCGCC 1 cut(s) 270
SmiMI CAYNNNNRTG 2 cut(s) 446, 756
SmlI CTYRAG 4 cut(s) 477, 536, 797, 866
SmoI CTYRAG 4 cut(s) 477, 536, 797, 866
Sse9I AATT 7 cut(s) 16, 252, 360, 416, 528, 542, 840
SsiI CCGC 8 cut(s) 78, 81, 111, 218, 223, 245, 356, 686
SspDI GGCGCC 1 cut(s) 268
SspMI CTAG 1 cut(s) 510
SstI GAGCTC 2 cut(s) 303, 518
StyD4I CCNGG 2 cut(s) 213, 263
StyI CCWWGG 3 cut(s) 33, 509, 819
TaiI ACGT 1 cut(s) 582
TaqI TCGA 1 cut(s) 736
TasI AATT 7 cut(s) 16, 252, 360, 416, 528, 542, 840
TatI WGTACW 1 cut(s) 769
TauI GCSGC 3 cut(s) 83, 247, 689
TfiI GAWTC 3 cut(s) 473, 592, 890
Tru1I TTAA 2 cut(s) 537, 798
Tru9I TTAA 2 cut(s) 537, 798
TscAI CASTG 1 cut(s) 858
TseI GCWGC 2 cut(s) 335, 899
TspDTI ATGAA 5 cut(s) 94, 444, 556, 765, 798
TspGWI ACGGA 1 cut(s) 179
TspRI CASTG 1 cut(s) 858
Van91I CCANNNNNTGG 1 cut(s) 34
Vha464I CTTAAG 2 cut(s) 536, 797
XapI RAATTY 1 cut(s) 542
XceI RCATGY 1 cut(s) 332
XcmI CCANNNNNNNNNTGG 1 cut(s) 892
XmaJI CCTAGG 1 cut(s) 509
XmnI GAANNNNTTC 1 cut(s) 591
XspI CTAG 1 cut(s) 510
ZrmI AGTACT 1 cut(s) 771
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.