Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0001367

Physical Location & Seq

Genomic Coordinates Forward (+)

3720378 .. 3723586

Gene Structure 3209 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g06370.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1110 bp

ATGACCACCGCCTCCTCCTCCCCTCCCTTCCAATTCCCCGATTTAATGGCCTCCGACTCCGAACCCGACGACTCCTACTCCCCCTCCCCCTCCCAAAACCCGACTCCGACTCCGACCGGCCCAAACCCGGCCCAGCTCCTCCACCTCTCCTTCAACCAAGACCACGGCTGCTTCTCCGCCGGCACCGACCTCGGCTTCTGCATCTACAACTGCGACCCCTTCCGCGAGATCTTCCGCCGCGACTTCGGCCCACGCGGCGCCGTCGGATTGGTCCAGATGCTCTTCCGCTGCAACATCCTCACCATCGTCGGCGGCGGCGGACCCGACCCGCTCTACTCCCCCAACAAGGTCATGATCTGGGACGACCACCAGTCCCGCTGCATCGGCGAGCTCTCCTTCCGGTCGGAAGTCAAAGGCGTCCGCCTCCGCCGCGACCGGATCGTCGTGGTTCTTGTCCAGAAGATCTTCGTCTACAATTTCGCCGATTTGAAGCTCCTTCATCAGATTGAGACGATCGCGAACCCGAAGGGACTGTGTGAGGTGTCGTATTTGGGGCCGCAGGCGGTGCTGGTGTGCCCGGGGCTCCAGAAAGGTCAGATTCGGGTCGAGCATTACGGGTCGAAGCGGACTAAGTTTATTATGGCACATGATTCCAGGCTGGCCTGCTTCGCGCTCTCGCAGGACGGGAGGTTGCTGGCTACGGCGAGTAGTAAGGGGACTTTGATCAGAGTTTTCAATACTTTGGATGGTTCATTGCTGCAAGAGGTAAGGAGAGGAGCAGATAGAGCAGAGATACATAGTCTTTCTTTCTCTTCGAATGCCCAATGGCTAGCTGTCTCGAGCGACAAGGGAACTGTCCATGTTTTTAATCTAAAGGTTGATTCAGGATCCTTGGGGAATGAAATATCACGCAGTCCATCAACTAGTCCTCCTAATTCATCAGCCATTTCATCTCTTTCTTTCATGAAAGGTGTTCTTCCAAGGTATTTCAGCTCAGAATGGTCAATGGCTAAATTTCACTTGCAGGAAGGTTTGGAGTACATTGTTGCCTTTGGCCACCAGAAGAACACAGTAGTGGTTCTTGGCATGGATGGAAGCTTCATGTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000045 GO:0000407 GO:0000422 GO:0003674 GO:0005488 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006464 GO:0006497 GO:0006807 GO:0006914 GO:0006996 GO:0007005 GO:0007033 GO:0008104 GO:0008150 GO:0008152 GO:0008289 GO:0009056 GO:0009058 GO:0009059 GO:0009987 GO:0016020 GO:0016043 GO:0016236 GO:0019538 GO:0019898 GO:0022411 GO:0022607 GO:0032266 GO:0033036 GO:0034045 GO:0034497 GO:0034613 GO:0034645 GO:0035091 GO:0036211 GO:0042157 GO:0042158 GO:0043167 GO:0043168 GO:0043170 GO:0043412 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044260 GO:0044267 GO:0044424 GO:0044425 GO:0044444 GO:0044464 GO:0044804 GO:0051179 GO:0051641 GO:0061726 GO:0061919 GO:0070727 GO:0070925 GO:0071704 GO:0071840 GO:0080025 GO:0098805 GO:1901564 GO:1901566 GO:1901576 GO:1901981 GO:1902936 GO:1903008 GO:1905037

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WD40

Protein Analysis

370

Amino Acids

40.55

Weight (kDa)

8.09

Isoelectric Point (pI)

46.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PROPPIN	PF21032	48 - 301	1e-32	PROPPIN
Beta-prop_THOC3	PF25174	115 - 292	1.5e-14	THOC3 beta-propeller domain
WD40_CDC20-Fz	PF24807	144 - 292	2.3e-07	CDC20/Fizzy WD40 domain
Beta-prop_WDR3_1st	PF25173	150 - 293	1e-07	WDR3 first beta-propeller domain
Beta-prop_EML_2	PF23414	197 - 294	4.9e-08	Echinoderm microtubule-associated protein second beta-propeller
WD40_WDHD1_1st	PF24817	210 - 297	1e-06	WDHD1 first WD40 domain
Beta-prop_WDR5	PF25175	215 - 292	5.9e-08	WDR5 beta-propeller domain
WD40_Prp19	PF24814	216 - 292	2.7e-07	Prp19 WD40 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001367)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G62770 AT3G62770
fragaria_vesca	FvH4_2g25170 FvH4_6g06350 FvH4_6g06350 FvH4_6g06350 FvH4_6g06370 FvH4_6g06370 FvH4_6g06370 FvH4_6g06370
malus_domestica	MD03G1283100.v1.1 MD04G1202000.v1.1 MD11G1303400.v1.1 MD12G1216000.v1.1 MD12G1216100.v1.1
prunus_persica	Prupe.6G322300_v2.0.a1 Prupe.8G256500_v2.0.a1
pyrus_communis	pycom03g22400 pycom04g17820 pycom11g26510 pycom12g20160
rosa_chinensis	RchiOBHm_Chr3g0455431 RchiOBHm_Chr3g0455461 RchiOBHm_Chr6g0293291
rosa_laevigata	RLG00000011961 RLG00000025360 RLG00000025363
rosa_multiflora	Rmu_sc0003728.1_g000001 Rmu_sc0008350.1_g000001 Rmu_ssc0000162.1_g000036
rosa_roxburghii	Rroxscaffold_6G00424260 Rroxscaffold_6G00424290 Rroxscaffold_7G00174280
rosa_rugosa	Rorug03G0007500 Rorug03G0007800 Rorug06G0234300
rosa_samantha	Rh2AG090700 Rh3AG066800 Rh3AG067200 Rh3BG069200 Rh3BG069500 Rh3CG067600 Rh3CG068000 Rh3DG069200 Rh3DG069500 Rh5BG179700 Rh6AG347100 Rh6BG354400 Rh6CG214700 Rh6DG204600
rosa_wichuraiana	Rw3G005280 Rw3G005310 Rw6G030210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	440
AccB1I	GGYRCC	2 cut(s)	182, 257
AccBSI	CCGCTC	1 cut(s)	331
AccI	GTMKAC	1 cut(s)	471
AccII	CGCG	6 cut(s)	225, 240, 255, 432, 518, 671
AclWI	GGATC	3 cut(s)	446, 882, 895
AcoI	YGGCCR	1 cut(s)	1054
AcsI	RAATTY	1 cut(s)	1013
AcyI	GRCGYC	2 cut(s)	258, 417
AfaI	GTAC	1 cut(s)	1040
AfiI	CCNNNNNNNGG	2 cut(s)	127, 346
AgsI	TTSAA	3 cut(s)	154, 490, 736
AhdI	GACNNNNNGTC	1 cut(s)	370
AhlI	ACTAGT	1 cut(s)	923
AjnI	CCWGG	1 cut(s)	653
AleI	CACNNNNGTG	1 cut(s)	1073
AluBI	AGCT	6 cut(s)	136, 391, 493, 833, 993, 1098
AluI	AGCT	6 cut(s)	136, 391, 493, 833, 993, 1098
Alw21I	GWGCWC	1 cut(s)	393
Alw26I	GTCTC	2 cut(s)	503, 841
AlwI	GGATC	3 cut(s)	446, 882, 895
Ama87I	CYCGRG	2 cut(s)	577, 838
AoxI	GGCC	7 cut(s)	48, 118, 129, 247, 554, 660, 1054
ApeKI	GCWGC	4 cut(s)	168, 288, 378, 757
ApoI	RAATTY	1 cut(s)	1013
Asp700I	GAANNNNTTC	1 cut(s)	464
AspLEI	GCGC	2 cut(s)	260, 673
AspS9I	GGNCC	6 cut(s)	119, 130, 248, 271, 320, 554
AsuC2I	CCSGG	3 cut(s)	128, 578, 579
AsuHPI	GGTGA	1 cut(s)	292
AsuII	TTCGAA	1 cut(s)	815
AsuNHI	GCTAGC	1 cut(s)	829
AvaI	CYCGRG	2 cut(s)	577, 838
AvaII	GGWCC	2 cut(s)	271, 320
BaeGI	GKGCMC	1 cut(s)	578
BalI	TGGCCA	1 cut(s)	1056
BamHI	GGATCC	1 cut(s)	887
BanI	GGYRCC	2 cut(s)	182, 257
BanII	GRGCYC	2 cut(s)	393, 585
Bbv12I	GWGCWC	1 cut(s)	393
BbvI	GCAGC	4 cut(s)	155, 275, 365, 744
BccI	CCATC	4 cut(s)	311, 740, 925, 1085
BceAI	ACGGC	3 cut(s)	181, 245, 717
BcgI	CGANNNNNNTGC	2 cut(s)	172, 206
BciT130I	CCWGG	1 cut(s)	655
BclI	TGATCA	1 cut(s)	723
BcnI	CCSGG	3 cut(s)	128, 578, 579
BcoDI	GTCTC	2 cut(s)	503, 841
BcuI	ACTAGT	1 cut(s)	923
BfaI	CTAG	2 cut(s)	830, 924
BfoI	RGCGCY	1 cut(s)	261
BglI	GCCNNNNNGGC	1 cut(s)	255
BglII	AGATCT	2 cut(s)	228, 462
Bme1390I	CCNGG	4 cut(s)	128, 578, 579, 655
Bme18I	GGWCC	2 cut(s)	271, 320
BmeRI	GACNNNNNGTC	1 cut(s)	370
BmeT110I	CYCGRG	2 cut(s)	577, 838
BmgT120I	GGNCC	6 cut(s)	119, 130, 248, 271, 320, 554
BmiI	GGNNCC	6 cut(s)	184, 259, 322, 555, 584, 889
BmrFI	CCNGG	4 cut(s)	128, 578, 579, 655
BmsI	GCATC	3 cut(s)	210, 267, 390
BmtI	GCTAGC	1 cut(s)	833
BpmI	CTGGAG	1 cut(s)	569
Bpu14I	TTCGAA	1 cut(s)	815
BpuMI	CCSGG	3 cut(s)	128, 578, 579
BsaHI	GRCGYC	2 cut(s)	258, 417
BsaJI	CCNNGG	6 cut(s)	163, 190, 577, 578, 891, 980
BsaWI	WCCGGW	2 cut(s)	399, 435
BsaXI	ACNNNNNCTCC	8 cut(s)	62, 68, 92, 94, 98, 124, 913, 943
Bsc4I	CCNNNNNNNGG	2 cut(s)	127, 346
Bse118I	RCCGGY	2 cut(s)	116, 179
Bse1I	ACTGG	1 cut(s)	370
Bse3DI	GCAATG	1 cut(s)	752
BseBI	CCWGG	1 cut(s)	655
BseDI	CCNNGG	6 cut(s)	163, 190, 577, 578, 891, 980
BseGI	GGATG	3 cut(s)	294, 751, 1096
BseLI	CCNNNNNNNGG	2 cut(s)	127, 346
BseMI	GCAATG	1 cut(s)	752
BseMII	CTCAG	1 cut(s)	1008
BseNI	ACTGG	1 cut(s)	370
BseRI	GAGGAG	4 cut(s)	4, 7, 128, 789
BseSI	GKGCMC	1 cut(s)	578
BseXI	GCAGC	4 cut(s)	155, 275, 365, 744
BseYI	CCCAGC	1 cut(s)	132
Bsh1236I	CGCG	6 cut(s)	225, 240, 255, 432, 518, 671
Bsh1285I	CGRYCG	4 cut(s)	117, 404, 436, 516
BshFI	GGCC	7 cut(s)	50, 120, 131, 249, 556, 662, 1056
BshNI	GGYRCC	2 cut(s)	182, 257
BsiEI	CGRYCG	4 cut(s)	117, 404, 436, 516
BsiHKAI	GWGCWC	1 cut(s)	393
BsiHKCI	CYCGRG	2 cut(s)	577, 838
BsiSI	CCGG	6 cut(s)	117, 128, 180, 400, 436, 578
BslFI	GGGAC	4 cut(s)	358, 374, 543, 730
BslI	CCNNNNNNNGG	2 cut(s)	127, 346
BsmAI	GTCTC	2 cut(s)	503, 841
BsmBI	CGTCTC	1 cut(s)	503
BsmFI	GGGAC	4 cut(s)	358, 374, 543, 730
BsmI	GAATGC	1 cut(s)	823
BsnI	GGCC	7 cut(s)	50, 120, 131, 249, 556, 662, 1056
BsoBI	CYCGRG	2 cut(s)	577, 838
Bsp119I	TTCGAA	1 cut(s)	815
Bsp1286I	GDGCHC	3 cut(s)	393, 578, 585
Bsp143I	GATC	7 cut(s)	228, 354, 438, 462, 513, 723, 887
Bsp68I	TCGCGA	1 cut(s)	518
BspANI	GGCC	7 cut(s)	50, 120, 131, 249, 556, 662, 1056
BspCNI	CTCAG	1 cut(s)	1007
BspFNI	CGCG	6 cut(s)	225, 240, 255, 432, 518, 671
BspHI	TCATGA	2 cut(s)	351, 963
BspLI	GGNNCC	6 cut(s)	184, 259, 322, 555, 584, 889
BspOI	GCTAGC	1 cut(s)	833
BspPI	GGATC	3 cut(s)	446, 882, 895
BspQI	GCTCTTC	1 cut(s)	287
BspT104I	TTCGAA	1 cut(s)	815
BspT107I	GGYRCC	2 cut(s)	182, 257
BsrBI	CCGCTC	1 cut(s)	331
BsrDI	GCAATG	1 cut(s)	752
BsrFI	RCCGGY	2 cut(s)	116, 179
BsrI	ACTGG	1 cut(s)	370
BssAI	RCCGGY	2 cut(s)	116, 179
BssECI	CCNNGG	6 cut(s)	163, 190, 577, 578, 891, 980
BssMI	GATC	7 cut(s)	228, 354, 438, 462, 513, 723, 887
BssNI	GRCGYC	2 cut(s)	258, 417
BssT1I	CCWWGG	2 cut(s)	891, 980
Bst2UI	CCWGG	1 cut(s)	655
Bst4CI	ACNGT	3 cut(s)	534, 856, 1072
Bst6I	CTCTTC	2 cut(s)	287, 817
BstACI	GRCGYC	2 cut(s)	258, 417
BstAPI	GCANNNNNTGC	1 cut(s)	565
BstBI	TTCGAA	1 cut(s)	815
BstC8I	GCNNGC	7 cut(s)	181, 389, 561, 660, 664, 696, 831
BstDEI	CTNAG	2 cut(s)	630, 994
BstDSI	CCRYGG	1 cut(s)	163
BstF5I	GGATG	3 cut(s)	294, 751, 1096
BstFNI	CGCG	6 cut(s)	225, 240, 255, 432, 518, 671
BstH2I	RGCGCY	1 cut(s)	261
BstHHI	GCGC	2 cut(s)	260, 673
BstKTI	GATC	7 cut(s)	231, 357, 441, 465, 516, 726, 890
BstMAI	GTCTC	2 cut(s)	503, 841
BstMBI	GATC	7 cut(s)	228, 354, 438, 462, 513, 723, 887
BstMCI	CGRYCG	4 cut(s)	117, 404, 436, 516
BstMWI	GCNNNNNNNGC	7 cut(s)	246, 255, 384, 429, 565, 668, 785
BstNI	CCWGG	1 cut(s)	655
BstSCI	CCNGG	4 cut(s)	126, 576, 577, 653
BstSLI	GKGCMC	1 cut(s)	578
BstUI	CGCG	6 cut(s)	225, 240, 255, 432, 518, 671
BstV1I	GCAGC	4 cut(s)	155, 275, 365, 744
BstX2I	RGATCY	3 cut(s)	228, 462, 887
BstYI	RGATCY	3 cut(s)	228, 462, 887
BsuRI	GGCC	7 cut(s)	50, 120, 131, 249, 556, 662, 1056
BtgI	CCRYGG	1 cut(s)	163
BtsCI	GGATG	3 cut(s)	294, 751, 1096
BtuMI	TCGCGA	1 cut(s)	518
Cac8I	GCNNGC	7 cut(s)	181, 389, 561, 660, 664, 696, 831
CciI	TCATGA	2 cut(s)	351, 963
CfoI	GCGC	2 cut(s)	260, 673
Cfr10I	RCCGGY	2 cut(s)	116, 179
Cfr13I	GGNCC	6 cut(s)	119, 130, 248, 271, 320, 554
Cfr9I	CCCGGG	1 cut(s)	577
CseI	GACGC	1 cut(s)	406
Csp6I	GTAC	1 cut(s)	1039
CviAII	CATG	6 cut(s)	352, 647, 860, 964, 1087, 1102
CviQI	GTAC	1 cut(s)	1039
DdeI	CTNAG	2 cut(s)	630, 994
DinI	GGCGCC	1 cut(s)	259
DpnI	GATC	7 cut(s)	230, 356, 440, 464, 515, 725, 889
DpnII	GATC	7 cut(s)	228, 354, 438, 462, 513, 723, 887
DrdI	GACNNNNNNGTC	1 cut(s)	440
DriI	GACNNNNNGTC	1 cut(s)	370
DseDI	GACNNNNNNGTC	1 cut(s)	440
EaeI	YGGCCR	1 cut(s)	1054
Eam1104I	CTCTTC	2 cut(s)	287, 817
Eam1105I	GACNNNNNGTC	1 cut(s)	370
EarI	CTCTTC	2 cut(s)	287, 817
EciI	GGCGGA	5 cut(s)	166, 224, 333, 410, 416
Ecl136II	GAGCTC	1 cut(s)	391
Eco130I	CCWWGG	2 cut(s)	891, 980
Eco24I	GRGCYC	2 cut(s)	393, 585
Eco47I	GGWCC	2 cut(s)	271, 320
Eco53kI	GAGCTC	1 cut(s)	391
Eco88I	CYCGRG	2 cut(s)	577, 838
EcoICRI	GAGCTC	1 cut(s)	391
EcoRII	CCWGG	1 cut(s)	653
EcoT14I	CCWWGG	2 cut(s)	891, 980
EcoT38I	GRGCYC	2 cut(s)	393, 585
EgeI	GGCGCC	1 cut(s)	259
EheI	GGCGCC	1 cut(s)	259
ErhI	CCWWGG	2 cut(s)	891, 980
Esp3I	CGTCTC	1 cut(s)	503
FaeI	CATG	6 cut(s)	355, 650, 863, 967, 1090, 1105
FaiI	YATR	8 cut(s)	353, 641, 648, 798, 861, 965, 1088, 1103
FalI	AAGNNNNNCTT	2 cut(s)	960, 992
FaqI	GGGAC	4 cut(s)	358, 374, 543, 730
FatI	CATG	6 cut(s)	351, 646, 859, 963, 1086, 1101
FauI	CCCGC	2 cut(s)	336, 383
FbaI	TGATCA	1 cut(s)	723
FblI	GTMKAC	1 cut(s)	471
FokI	GGATG	3 cut(s)	281, 758, 1103
FriOI	GRGCYC	2 cut(s)	393, 585
FspBI	CTAG	2 cut(s)	830, 924
GlaI	GCGC	2 cut(s)	259, 672
GsaI	CCCAGC	1 cut(s)	136
GsuI	CTGGAG	1 cut(s)	569
HaeII	RGCGCY	1 cut(s)	261
HaeIII	GGCC	7 cut(s)	50, 120, 131, 249, 556, 662, 1056
HapII	CCGG	6 cut(s)	117, 128, 180, 400, 436, 578
HgaI	GACGC	1 cut(s)	406
HhaI	GCGC	2 cut(s)	260, 673
Hin1I	GRCGYC	2 cut(s)	258, 417
Hin1II	CATG	6 cut(s)	355, 650, 863, 967, 1090, 1105
Hin6I	GCGC	2 cut(s)	258, 671
HinP1I	GCGC	2 cut(s)	258, 671
HindIII	AAGCTT	1 cut(s)	1096
HinfI	GANTC	7 cut(s)	56, 71, 103, 109, 598, 650, 881
HpaII	CCGG	6 cut(s)	117, 128, 180, 400, 436, 578
HphI	GGTGA	1 cut(s)	292
Hpy166II	GTNNAC	1 cut(s)	472
Hpy188III	TCNNGA	8 cut(s)	274, 352, 457, 517, 586, 838, 885, 964
Hpy8I	GTNNAC	1 cut(s)	472
Hpy99I	CGWCG	4 cut(s)	71, 266, 311, 446
HpyAV	CCTTC	7 cut(s)	37, 160, 229, 406, 506, 520, 1022
HpyCH4III	ACNGT	3 cut(s)	534, 856, 1072
HpyCH4V	TGCA	5 cut(s)	201, 291, 381, 760, 1024
HpyF10VI	GCNNNNNNNGC	7 cut(s)	246, 255, 384, 429, 565, 668, 785
HpyF3I	CTNAG	2 cut(s)	630, 994
Hsp92I	GRCGYC	2 cut(s)	258, 417
Hsp92II	CATG	6 cut(s)	355, 650, 863, 967, 1090, 1105
HspAI	GCGC	2 cut(s)	258, 671
KasI	GGCGCC	1 cut(s)	257
KroI	GCCGGC	1 cut(s)	179
KroNI	GCCGGC	1 cut(s)	181
Ksp22I	TGATCA	1 cut(s)	723
Kzo9I	GATC	7 cut(s)	228, 354, 438, 462, 513, 723, 887
LguI	GCTCTTC	1 cut(s)	287
LmnI	GCTCC	4 cut(s)	141, 498, 588, 776
Lsp1109I	GCAGC	4 cut(s)	155, 275, 365, 744
LweI	GCATC	3 cut(s)	210, 267, 390
MaeI	CTAG	2 cut(s)	830, 924
MalI	GATC	7 cut(s)	230, 356, 440, 464, 515, 725, 889
MbiI	CCGCTC	1 cut(s)	331
MboI	GATC	7 cut(s)	228, 354, 438, 462, 513, 723, 887
MboII	GAAGA	7 cut(s)	223, 274, 457, 472, 804, 968, 1075
MflI	RGATCY	3 cut(s)	228, 462, 887
MhlI	GDGCHC	3 cut(s)	393, 578, 585
MlsI	TGGCCA	1 cut(s)	1056
MluCI	AATT	4 cut(s)	32, 475, 934, 1013
MluNI	TGGCCA	1 cut(s)	1056
Mly113I	GGCGCC	1 cut(s)	258
MlyI	GAGTC	4 cut(s)	50, 65, 97, 103
MmeI	TCCRAC	5 cut(s)	78, 131, 137, 244, 384
Mox20I	TGGCCA	1 cut(s)	1056
MroNI	GCCGGC	1 cut(s)	179
MroXI	GAANNNNTTC	1 cut(s)	464
MscI	TGGCCA	1 cut(s)	1056
MseI	TTAA	2 cut(s)	44, 867
MslI	CAYNNNNRTG	1 cut(s)	1073
Msp20I	TGGCCA	1 cut(s)	1056
MspA1I	CMGCKG	2 cut(s)	288, 378
MspI	CCGG	6 cut(s)	117, 128, 180, 400, 436, 578
MspR9I	CCNGG	4 cut(s)	128, 578, 579, 655
Mva1269I	GAATGC	1 cut(s)	823
MvaI	CCWGG	1 cut(s)	655
MvnI	CGCG	6 cut(s)	225, 240, 255, 432, 518, 671
MwoI	GCNNNNNNNGC	7 cut(s)	246, 255, 384, 429, 565, 668, 785
NaeI	GCCGGC	1 cut(s)	181
NarI	GGCGCC	1 cut(s)	258
NciI	CCSGG	3 cut(s)	128, 578, 579
NdeII	GATC	7 cut(s)	228, 354, 438, 462, 513, 723, 887
NgoMIV	GCCGGC	1 cut(s)	179
NheI	GCTAGC	1 cut(s)	829
NlaIII	CATG	6 cut(s)	355, 650, 863, 967, 1090, 1105
NlaIV	GGNNCC	6 cut(s)	184, 259, 322, 555, 584, 889
NmeAIII	GCCGAG	1 cut(s)	171
NruI	TCGCGA	1 cut(s)	518
NspV	TTCGAA	1 cut(s)	815
OliI	CACNNNNGTG	1 cut(s)	1073
PaeR7I	CTCGAG	1 cut(s)	838
PagI	TCATGA	2 cut(s)	351, 963
PciSI	GCTCTTC	1 cut(s)	287
PctI	GAATGC	1 cut(s)	823
PdiI	GCCGGC	1 cut(s)	181
PdmI	GAANNNNTTC	1 cut(s)	464
PfeI	GAWTC	3 cut(s)	598, 650, 881
Ple19I	CGATCG	1 cut(s)	516
PleI	GAGTC	4 cut(s)	50, 65, 97, 103
PluTI	GGCGCC	1 cut(s)	261
PpsI	GAGTC	4 cut(s)	50, 65, 97, 103
Psp124BI	GAGCTC	1 cut(s)	393
Psp6I	CCWGG	1 cut(s)	653
PspFI	CCCAGC	1 cut(s)	132
PspGI	CCWGG	1 cut(s)	653
PspN4I	GGNNCC	6 cut(s)	184, 259, 322, 555, 584, 889
PspPI	GGNCC	6 cut(s)	119, 130, 248, 271, 320, 554
PsuI	RGATCY	3 cut(s)	228, 462, 887
PvuI	CGATCG	1 cut(s)	516
RruI	TCGCGA	1 cut(s)	518
RsaI	GTAC	1 cut(s)	1040
RsaNI	GTAC	1 cut(s)	1039
RseI	CAYNNNNRTG	1 cut(s)	1073
SacI	GAGCTC	1 cut(s)	393
SapI	GCTCTTC	1 cut(s)	287
SaqAI	TTAA	2 cut(s)	44, 867
Sau3AI	GATC	7 cut(s)	228, 354, 438, 462, 513, 723, 887
Sau96I	GGNCC	6 cut(s)	119, 130, 248, 271, 320, 554
SchI	GAGTC	4 cut(s)	50, 65, 97, 103
ScrFI	CCNGG	4 cut(s)	128, 578, 579, 655
SduI	GDGCHC	3 cut(s)	393, 578, 585
SfaNI	GCATC	3 cut(s)	210, 267, 390
SfoI	GGCGCC	1 cut(s)	259
Sfr274I	CTCGAG	1 cut(s)	838
SfuI	TTCGAA	1 cut(s)	815
SinI	GGWCC	2 cut(s)	271, 320
SlaI	CTCGAG	1 cut(s)	838
SmaI	CCCGGG	1 cut(s)	579
SmiMI	CAYNNNNRTG	1 cut(s)	1073
SmlI	CTYRAG	1 cut(s)	838
SmoI	CTYRAG	1 cut(s)	838
SpeI	ACTAGT	1 cut(s)	923
Sse9I	AATT	4 cut(s)	32, 475, 934, 1013
SspDI	GGCGCC	1 cut(s)	257
SspMI	CTAG	2 cut(s)	830, 924
SstI	GAGCTC	1 cut(s)	393
StyD4I	CCNGG	4 cut(s)	126, 576, 577, 653
StyI	CCWWGG	2 cut(s)	891, 980
TaaI	ACNGT	3 cut(s)	534, 856, 1072
TaqI	TCGA	4 cut(s)	606, 620, 815, 839
TasI	AATT	4 cut(s)	32, 475, 934, 1013
TatI	WGTACW	1 cut(s)	1038
TauI	GCSGC	6 cut(s)	240, 258, 315, 318, 432, 559
TfiI	GAWTC	3 cut(s)	598, 650, 881
Tru1I	TTAA	2 cut(s)	44, 867
Tru9I	TTAA	2 cut(s)	44, 867
TseI	GCWGC	4 cut(s)	168, 288, 378, 757
TspDTI	ATGAA	8 cut(s)	488, 741, 915, 927, 939, 952, 980, 1090
TspMI	CCCGGG	1 cut(s)	577
VpaK11BI	GGWCC	2 cut(s)	271, 320
XapI	RAATTY	1 cut(s)	1013
XhoI	CTCGAG	1 cut(s)	838
XmaI	CCCGGG	1 cut(s)	577
XmiI	GTMKAC	1 cut(s)	471
XmnI	GAANNNNTTC	1 cut(s)	464
XspI	CTAG	2 cut(s)	830, 924

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.