RLG00000011961

WD repeat domain phosphoinositide-interacting protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0001367
Physical Location & Seq
Reverse (-)
14098336 .. 14100969
2634 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000011961

Sequence Viewer

Length: 1269 bp
ATGGCCACCCTCTCCGCCTTCTCACCGCCCTCCTGGCCGGACCCCAACACGGCCACCTTCCTCTCCGAGACCACCGACGCCGACTCGATCGCCACCGCCGACGACCACGACCCCCAATCGCCTCCTCCAAACTCTGACCTCCACAACAACAACACCACCACCACCTTCTCGCCGTCGCCGCCGGACCCAACCCCTGCGCCGTCGCGCTCGCCTCCGTCGCTGTTCCACCTCTCGTTCAATCAGGACCAGGCCTGCTTCGCCGTCGGCACAGACCACGGCTTCCGGATCTACAACTGCGACCCGTTCCGCGAGCTCTTCCGCCGCGACTTCGACAACGGCGGCGGAATCGGCGTCGTGGAGATGCTCTTCCGCTGCAATATCCTGTCCATCGTCGGCGGTGGGCCCGACCCTCAGTACCCAACCAACAAGGTCATGATTTGGGACGATCACCAAGGCCGGTGCATCGGCGAGCTTTCGTTCCGCTCCGTCGTCCGGTCCGTGCGCCTCCGCAGGGACCGAATCGTTGTCGTTTTGGAGCAGAAGATTTTCGTGTACAATTTCGCCGACTTGAAATTGCTCCACCAGATTGAGACGATTGCGAACCCCAAGGGGCTCTGCGCTGTGTCGCAAGTGGCCGGGTCGCTGGTGCTGGTTTGCCCGGGGTTGCAGAAAGGGCAGGTTAGGGTTGAGCACTATGCTTCCAAGAGGACCAAATTCATCATGGCTCATGATTCCAGGCTCGCCTGCTTTGCTCTGACGCCGGACGGCCAGTTACTGGCCACCGCCAGCAGCAAGGGGACCCTCATTCGGATTTTCAATACACTTGATGGGAGTTTGCTTCAAGAGGTAAGGAGGGGAGCAGACAGAGCAGAAATCTATAGTCTGGCATTCTCTTCTACTGCTCAGTGGCTAGCGGTCTCGAGTGATAAGGGAACAGTCCATGTTTTCAATCTGAAGGTTAATTCCGGATCAAGTGGAAATGAGATGCGTACTTCCTCTGATTCTAATATAGTTACTTCATCATCAAACTCATCTCTTTCTTTCATCAGAGGTGTTTTGCCCAAATATTTTAACTCAGAGTGGTCTGTTGCTCAGTTTCGCTTGCTTGAGGGTTCTCAATACCTTGTTGCTTTTGGCCACCAGAAGAATACAGTGGTCATTCTTGGCATGGATGGAAGCTTCTATCGGTGCCAGTTTGACCCGGTGAATGGAGGAGAGATGACCCAGCTGGAATACCACAACTTTCTAAAGCCAGAAGAAGCCTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000045 GO:0000407 GO:0000422 GO:0001101 GO:0003674 GO:0005488 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006464 GO:0006497 GO:0006807 GO:0006914 GO:0006950 GO:0006952 GO:0006970 GO:0006979 GO:0006996 GO:0007005 GO:0007033 GO:0007275 GO:0007568 GO:0008104 GO:0008150 GO:0008152 GO:0008289 GO:0009056 GO:0009058 GO:0009059 GO:0009414 GO:0009415 GO:0009605 GO:0009607 GO:0009620 GO:0009628 GO:0009651 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0009991 GO:0010035 GO:0010150 GO:0010506 GO:0010508 GO:0016020 GO:0016043 GO:0016236 GO:0019222 GO:0019538 GO:0019898 GO:0022411 GO:0022607 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031667 GO:0032266 GO:0032501 GO:0032502 GO:0033036 GO:0034045 GO:0034497 GO:0034613 GO:0034645 GO:0035091 GO:0036211 GO:0042157 GO:0042158 GO:0042221 GO:0042594 GO:0043167 GO:0043168 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044260 GO:0044267 GO:0044424 GO:0044425 GO:0044444 GO:0044464 GO:0044804 GO:0048366 GO:0048367 GO:0048518 GO:0048522 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051179 GO:0051641 GO:0051704 GO:0051707 GO:0061726 GO:0061919 GO:0065007 GO:0070727 GO:0070925 GO:0071704 GO:0071840 GO:0080025 GO:0090693 GO:0098542 GO:0098805 GO:0099402 GO:1901564 GO:1901566 GO:1901576 GO:1901700 GO:1901981 GO:1902936 GO:1903008 GO:1905037
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
WD40

Protein Analysis

423

Amino Acids

46.49

Weight (kDa)

6.13

Isoelectric Point (pI)

45.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PROPPIN PF21032 76 - 415 2.1e-38 PROPPIN
Beta-prop_THOC3 PF25174 142 - 338 1.6e-13 THOC3 beta-propeller domain
WD40_CDC20-Fz PF24807 171 - 322 3.6e-07 CDC20/Fizzy WD40 domain
Beta-prop_WDR3_1st PF25173 180 - 321 2.7e-07 WDR3 first beta-propeller domain
Beta-prop_EML_2 PF23414 225 - 326 6.6e-08 Echinoderm microtubule-associated protein second beta-propeller
WD40_WDHD1_1st PF24817 234 - 341 6.3e-07 WDHD1 first WD40 domain
Beta-prop_WDR5 PF25175 242 - 321 4.6e-08 WDR5 beta-propeller domain
WD40_Prp19 PF24814 243 - 391 3.7e-09 Prp19 WD40 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 667
AccB1I GGYRCC 1 cut(s) 1188
AccB7I CCANNNNNTGG 1 cut(s) 775
AccBSI CCGCTC 1 cut(s) 483
AccII CGCG 3 cut(s) 205, 309, 324
AccIII TCCGGA 2 cut(s) 282, 965
AclWI GGATC 2 cut(s) 293, 976
AcoI YGGCCR 7 cut(s) 3, 35, 51, 633, 766, 777, 1135
AcsI RAATTY 1 cut(s) 713
AcuI CTGAAG 1 cut(s) 974
AcyI GRCGYC 3 cut(s) 78, 351, 758
AfaI GTAC 3 cut(s) 416, 554, 991
AfiI CCNNNNNNNGG 6 cut(s) 49, 492, 511, 775, 807, 1208
AgsI TTSAA 5 cut(s) 238, 571, 817, 842, 949
AjnI CCWGG 3 cut(s) 32, 246, 734
AluBI AGCT 4 cut(s) 313, 472, 1179, 1228
AluI AGCT 4 cut(s) 313, 472, 1179, 1228
Alw21I GWGCWC 2 cut(s) 315, 693
Alw26I GTCTC 3 cut(s) 62, 584, 922
AlwI GGATC 2 cut(s) 293, 976
AlwNI CAGNNNCTG 1 cut(s) 775
Ama87I CYCGRG 2 cut(s) 658, 919
Aor13HI TCCGGA 2 cut(s) 282, 965
ApaI GGGCCC 1 cut(s) 405
ApeKI GCWGC 2 cut(s) 372, 789
ApoI RAATTY 1 cut(s) 713
Asp700I GAANNNNTTC 1 cut(s) 545
AspLEI GCGC 4 cut(s) 199, 207, 504, 620
AspS9I GGNCC 9 cut(s) 40, 184, 244, 401, 402, 495, 514, 708, 798
AsuC2I CCSGG 4 cut(s) 637, 659, 660, 1202
AsuHPI GGTGA 3 cut(s) 15, 440, 1216
AsuNHI GCTAGC 1 cut(s) 910
AvaI CYCGRG 2 cut(s) 658, 919
AvaII GGWCC 7 cut(s) 40, 184, 244, 495, 514, 708, 798
BaeGI GKGCMC 1 cut(s) 405
BalI TGGCCA 3 cut(s) 5, 779, 1137
BanI GGYRCC 1 cut(s) 1188
BanII GRGCYC 3 cut(s) 315, 405, 615
Bbv12I GWGCWC 2 cut(s) 315, 693
BbvI GCAGC 2 cut(s) 359, 801
BccI CCATC 3 cut(s) 395, 821, 1166
BceAI ACGGC 7 cut(s) 66, 157, 184, 245, 292, 352, 781
BciT130I CCWGG 3 cut(s) 34, 248, 736
BcnI CCSGG 4 cut(s) 637, 659, 660, 1202
BcoDI GTCTC 3 cut(s) 62, 584, 922
BfaI CTAG 1 cut(s) 911
BfmI CTRYAG 1 cut(s) 877
BfuAI ACCTGC 1 cut(s) 667
BglI GCCNNNNNGGC 1 cut(s) 34
BisI GCNGC 5 cut(s) 179, 322, 340, 373, 790
BlsI GCNGC 5 cut(s) 180, 323, 341, 374, 791
Bme1390I CCNGG 7 cut(s) 34, 248, 637, 659, 660, 736, 1202
Bme18I GGWCC 7 cut(s) 40, 184, 244, 495, 514, 708, 798
BmeT110I CYCGRG 2 cut(s) 658, 919
BmgT120I GGNCC 9 cut(s) 40, 184, 244, 401, 402, 495, 514, 708, 798
BmiI GGNNCC 7 cut(s) 42, 186, 403, 515, 799, 800, 1190
BmrFI CCNGG 7 cut(s) 34, 248, 637, 659, 660, 736, 1202
BmsI GCATC 3 cut(s) 351, 471, 975
BmtI GCTAGC 1 cut(s) 914
BpuEI CTTGAG 1 cut(s) 1127
BpuMI CCSGG 4 cut(s) 637, 659, 660, 1202
BsaHI GRCGYC 3 cut(s) 78, 351, 758
BsaI GGTCTC 2 cut(s) 62, 922
BsaJI CCNNGG 5 cut(s) 274, 451, 606, 658, 659
BsaWI WCCGGW 3 cut(s) 282, 492, 965
Bsc4I CCNNNNNNNGG 6 cut(s) 49, 492, 511, 775, 807, 1208
Bse118I RCCGGY 1 cut(s) 456
Bse1I ACTGG 3 cut(s) 769, 780, 1192
BseAI TCCGGA 2 cut(s) 282, 965
BseBI CCWGG 3 cut(s) 34, 248, 736
BseDI CCNNGG 5 cut(s) 274, 451, 606, 658, 659
BseGI GGATG 1 cut(s) 1177
BseLI CCNNNNNNNGG 6 cut(s) 49, 492, 511, 775, 807, 1208
BseMII CTCAG 4 cut(s) 425, 917, 1089, 1106
BseNI ACTGG 3 cut(s) 769, 780, 1192
BseRI GAGGAG 2 cut(s) 114, 1227
BseSI GKGCMC 1 cut(s) 405
BseXI GCAGC 2 cut(s) 359, 801
BseYI CCCAGC 1 cut(s) 1224
Bsh1236I CGCG 3 cut(s) 205, 309, 324
Bsh1285I CGRYCG 1 cut(s) 90
BshNI GGYRCC 1 cut(s) 1188
BsiEI CGRYCG 1 cut(s) 90
BsiHKAI GWGCWC 2 cut(s) 315, 693
BsiHKCI CYCGRG 2 cut(s) 658, 919
BslFI GGGAC 3 cut(s) 455, 527, 811
BslI CCNNNNNNNGG 6 cut(s) 49, 492, 511, 775, 807, 1208
BsmAI GTCTC 3 cut(s) 62, 584, 922
BsmBI CGTCTC 1 cut(s) 584
BsmFI GGGAC 3 cut(s) 455, 527, 811
BsmI GAATGC 1 cut(s) 887
Bso31I GGTCTC 2 cut(s) 62, 922
BsoBI CYCGRG 2 cut(s) 658, 919
Bsp120I GGGCCC 1 cut(s) 401
Bsp1286I GDGCHC 4 cut(s) 315, 405, 615, 693
Bsp13I TCCGGA 2 cut(s) 282, 965
Bsp1407I TGTACA 1 cut(s) 552
Bsp143I GATC 4 cut(s) 87, 285, 445, 968
BspCNI CTCAG 4 cut(s) 424, 916, 1088, 1105
BspEI TCCGGA 2 cut(s) 282, 965
BspFNI CGCG 3 cut(s) 205, 309, 324
BspHI TCATGA 2 cut(s) 432, 727
BspLI GGNNCC 7 cut(s) 42, 186, 403, 515, 799, 800, 1190
BspMI ACCTGC 1 cut(s) 667
BspOI GCTAGC 1 cut(s) 914
BspPI GGATC 2 cut(s) 293, 976
BspQI GCTCTTC 2 cut(s) 320, 371
BspT107I GGYRCC 1 cut(s) 1188
BspTNI GGTCTC 2 cut(s) 62, 922
BsrBI CCGCTC 1 cut(s) 483
BsrFI RCCGGY 1 cut(s) 456
BsrGI TGTACA 1 cut(s) 552
BsrI ACTGG 3 cut(s) 769, 780, 1192
BssAI RCCGGY 1 cut(s) 456
BssECI CCNNGG 5 cut(s) 274, 451, 606, 658, 659
BssMI GATC 4 cut(s) 87, 285, 445, 968
BssNI GRCGYC 3 cut(s) 78, 351, 758
BssT1I CCWWGG 2 cut(s) 451, 606
Bst2UI CCWGG 3 cut(s) 34, 248, 736
Bst4CI ACNGT 2 cut(s) 937, 1153
Bst6I CTCTTC 3 cut(s) 320, 371, 898
BstACI GRCGYC 3 cut(s) 78, 351, 758
BstAUI TGTACA 1 cut(s) 552
BstC8I GCNNGC 9 cut(s) 209, 253, 311, 470, 741, 745, 787, 912, 1103
BstDEI CTNAG 4 cut(s) 411, 903, 1075, 1092
BstDSI CCRYGG 1 cut(s) 274
BstF5I GGATG 1 cut(s) 1177
BstFNI CGCG 3 cut(s) 205, 309, 324
BstHHI GCGC 4 cut(s) 199, 207, 504, 620
BstKTI GATC 4 cut(s) 90, 288, 448, 971
BstMAI GTCTC 3 cut(s) 62, 584, 922
BstMBI GATC 4 cut(s) 87, 285, 445, 968
BstMCI CGRYCG 1 cut(s) 90
BstMWI GCNNNNNNNGC 8 cut(s) 34, 178, 217, 257, 348, 673, 749, 866
BstNI CCWGG 3 cut(s) 34, 248, 736
BstSCI CCNGG 7 cut(s) 32, 246, 635, 657, 658, 734, 1200
BstSFI CTRYAG 1 cut(s) 877
BstSLI GKGCMC 1 cut(s) 405
BstUI CGCG 3 cut(s) 205, 309, 324
BstV1I GCAGC 2 cut(s) 359, 801
BstX2I RGATCY 1 cut(s) 285
BstYI RGATCY 1 cut(s) 285
BtgI CCRYGG 1 cut(s) 274
BtsCI GGATG 1 cut(s) 1177
BtsIMutI CAGTG 2 cut(s) 911, 1158
BveI ACCTGC 1 cut(s) 667
Cac8I GCNNGC 9 cut(s) 209, 253, 311, 470, 741, 745, 787, 912, 1103
CaiI CAGNNNCTG 1 cut(s) 775
CciI TCATGA 2 cut(s) 432, 727
CfoI GCGC 4 cut(s) 199, 207, 504, 620
Cfr10I RCCGGY 1 cut(s) 456
Cfr13I GGNCC 9 cut(s) 40, 184, 244, 401, 402, 495, 514, 708, 798
Cfr9I CCCGGG 1 cut(s) 658
CpoI CGGWCCG 1 cut(s) 495
CseI GACGC 3 cut(s) 86, 340, 766
Csp6I GTAC 3 cut(s) 415, 553, 990
CspI CGGWCCG 1 cut(s) 495
CviAII CATG 5 cut(s) 433, 721, 728, 941, 1168
CviQI GTAC 3 cut(s) 415, 553, 990
DdeI CTNAG 4 cut(s) 411, 903, 1075, 1092
DpnI GATC 4 cut(s) 89, 287, 447, 970
DpnII GATC 4 cut(s) 87, 285, 445, 968
EaeI YGGCCR 7 cut(s) 3, 35, 51, 633, 766, 777, 1135
Eam1104I CTCTTC 3 cut(s) 320, 371, 898
EarI CTCTTC 3 cut(s) 320, 371, 898
EciI GGCGGA 3 cut(s) 4, 308, 357
Ecl136II GAGCTC 1 cut(s) 313
Eco130I CCWWGG 2 cut(s) 451, 606
Eco147I AGGCCT 1 cut(s) 251
Eco24I GRGCYC 3 cut(s) 315, 405, 615
Eco31I GGTCTC 2 cut(s) 62, 922
Eco47I GGWCC 7 cut(s) 40, 184, 244, 495, 514, 708, 798
Eco53kI GAGCTC 1 cut(s) 313
Eco57I CTGAAG 1 cut(s) 974
Eco88I CYCGRG 2 cut(s) 658, 919
EcoICRI GAGCTC 1 cut(s) 313
EcoO109I RGGNCCY 1 cut(s) 798
EcoRII CCWGG 3 cut(s) 32, 246, 734
EcoT14I CCWWGG 2 cut(s) 451, 606
EcoT38I GRGCYC 3 cut(s) 315, 405, 615
ErhI CCWWGG 2 cut(s) 451, 606
Esp3I CGTCTC 1 cut(s) 584
FaeI CATG 5 cut(s) 436, 724, 731, 944, 1171
FaiI YATR 8 cut(s) 434, 696, 722, 729, 879, 942, 1010, 1169
FaqI GGGAC 3 cut(s) 455, 527, 811
FatI CATG 5 cut(s) 432, 720, 727, 940, 1167
Fnu4HI GCNGC 5 cut(s) 179, 322, 340, 373, 790
FokI GGATG 1 cut(s) 1184
FriOI GRGCYC 3 cut(s) 315, 405, 615
Fsp4HI GCNGC 5 cut(s) 179, 322, 340, 373, 790
FspBI CTAG 1 cut(s) 911
GlaI GCGC 4 cut(s) 198, 206, 503, 619
GluI GCNGC 5 cut(s) 179, 322, 340, 373, 790
GsaI CCCAGC 1 cut(s) 1228
HgaI GACGC 3 cut(s) 86, 340, 766
HhaI GCGC 4 cut(s) 199, 207, 504, 620
Hin1I GRCGYC 3 cut(s) 78, 351, 758
Hin1II CATG 5 cut(s) 436, 724, 731, 944, 1171
Hin6I GCGC 4 cut(s) 197, 205, 502, 618
HinP1I GCGC 4 cut(s) 197, 205, 502, 618
HindIII AAGCTT 1 cut(s) 1177
HinfI GANTC 5 cut(s) 83, 345, 519, 731, 1001
HphI GGTGA 3 cut(s) 15, 440, 1216
Hpy166II GTNNAC 1 cut(s) 553
Hpy188I TCNGA 9 cut(s) 67, 136, 756, 810, 954, 1000, 1049, 1078, 1268
Hpy188III TCNNGA 7 cut(s) 242, 283, 433, 728, 842, 919, 966
Hpy8I GTNNAC 1 cut(s) 553
Hpy99I CGWCG 9 cut(s) 80, 104, 178, 205, 220, 266, 356, 395, 491
HpyAV CCTTC 4 cut(s) 28, 67, 175, 949
HpyCH4III ACNGT 2 cut(s) 937, 1153
HpyCH4V TGCA 3 cut(s) 375, 462, 667
HpyF10VI GCNNNNNNNGC 8 cut(s) 34, 178, 217, 257, 348, 673, 749, 866
HpyF3I CTNAG 4 cut(s) 411, 903, 1075, 1092
Hsp92I GRCGYC 3 cut(s) 78, 351, 758
Hsp92II CATG 5 cut(s) 436, 724, 731, 944, 1171
HspAI GCGC 4 cut(s) 197, 205, 502, 618
KflI GGGWCCC 1 cut(s) 798
Kpn2I TCCGGA 2 cut(s) 282, 965
Kzo9I GATC 4 cut(s) 87, 285, 445, 968
LguI GCTCTTC 2 cut(s) 320, 371
LmnI GCTCC 4 cut(s) 488, 535, 582, 857
Lsp1109I GCAGC 2 cut(s) 359, 801
LweI GCATC 3 cut(s) 351, 471, 975
MaeI CTAG 1 cut(s) 911
MaeIII GTNAC 2 cut(s) 771, 1012
MalI GATC 4 cut(s) 89, 287, 447, 970
MbiI CCGCTC 1 cut(s) 483
MboI GATC 4 cut(s) 87, 285, 445, 968
MboII GAAGA 6 cut(s) 307, 358, 553, 885, 1156, 1268
MflI RGATCY 1 cut(s) 285
MhlI GDGCHC 4 cut(s) 315, 405, 615, 693
MlsI TGGCCA 3 cut(s) 5, 779, 1137
MluCI AATT 4 cut(s) 556, 572, 713, 961
MluNI TGGCCA 3 cut(s) 5, 779, 1137
MlyI GAGTC 1 cut(s) 77
Mox20I TGGCCA 3 cut(s) 5, 779, 1137
MroI TCCGGA 2 cut(s) 282, 965
MroXI GAANNNNTTC 1 cut(s) 545
MscI TGGCCA 3 cut(s) 5, 779, 1137
MseI TTAA 2 cut(s) 960, 1071
Msp20I TGGCCA 3 cut(s) 5, 779, 1137
MspA1I CMGCKG 2 cut(s) 372, 1228
MspR9I CCNGG 7 cut(s) 34, 248, 637, 659, 660, 736, 1202
Mva1269I GAATGC 1 cut(s) 887
MvaI CCWGG 3 cut(s) 34, 248, 736
MvnI CGCG 3 cut(s) 205, 309, 324
MwoI GCNNNNNNNGC 8 cut(s) 34, 178, 217, 257, 348, 673, 749, 866
NciI CCSGG 4 cut(s) 637, 659, 660, 1202
NdeII GATC 4 cut(s) 87, 285, 445, 968
NheI GCTAGC 1 cut(s) 910
NlaIII CATG 5 cut(s) 436, 724, 731, 944, 1171
NlaIV GGNNCC 7 cut(s) 42, 186, 403, 515, 799, 800, 1190
PaeR7I CTCGAG 1 cut(s) 919
PagI TCATGA 2 cut(s) 432, 727
PceI AGGCCT 1 cut(s) 251
PciSI GCTCTTC 2 cut(s) 320, 371
PcsI WCGNNNNNNNCGW 2 cut(s) 96, 495
PctI GAATGC 1 cut(s) 887
PdmI GAANNNNTTC 1 cut(s) 545
PfeI GAWTC 4 cut(s) 345, 519, 731, 1001
PflMI CCANNNNNTGG 1 cut(s) 775
PkrI GCNGC 5 cut(s) 180, 323, 341, 374, 791
Ple19I CGATCG 1 cut(s) 90
PleI GAGTC 1 cut(s) 77
PpsI GAGTC 1 cut(s) 77
PpuMI RGGWCCY 1 cut(s) 798
Psp124BI GAGCTC 1 cut(s) 315
Psp5II RGGWCCY 1 cut(s) 798
Psp6I CCWGG 3 cut(s) 32, 246, 734
PspFI CCCAGC 1 cut(s) 1224
PspGI CCWGG 3 cut(s) 32, 246, 734
PspN4I GGNNCC 7 cut(s) 42, 186, 403, 515, 799, 800, 1190
PspOMI GGGCCC 1 cut(s) 401
PspPI GGNCC 9 cut(s) 40, 184, 244, 401, 402, 495, 514, 708, 798
PspPPI RGGWCCY 1 cut(s) 798
PstNI CAGNNNCTG 1 cut(s) 775
PsuI RGATCY 1 cut(s) 285
PvuI CGATCG 1 cut(s) 90
PvuII CAGCTG 1 cut(s) 1228
RsaI GTAC 3 cut(s) 416, 554, 991
RsaNI GTAC 3 cut(s) 415, 553, 990
Rsr2I CGGWCCG 1 cut(s) 495
RsrII CGGWCCG 1 cut(s) 495
SacI GAGCTC 1 cut(s) 315
SapI GCTCTTC 2 cut(s) 320, 371
SaqAI TTAA 2 cut(s) 960, 1071
SatI GCNGC 5 cut(s) 179, 322, 340, 373, 790
Sau3AI GATC 4 cut(s) 87, 285, 445, 968
Sau96I GGNCC 9 cut(s) 40, 184, 244, 401, 402, 495, 514, 708, 798
SchI GAGTC 1 cut(s) 77
ScrFI CCNGG 7 cut(s) 34, 248, 637, 659, 660, 736, 1202
SduI GDGCHC 4 cut(s) 315, 405, 615, 693
SfaNI GCATC 3 cut(s) 351, 471, 975
SfcI CTRYAG 1 cut(s) 877
Sfr274I CTCGAG 1 cut(s) 919
SinI GGWCC 7 cut(s) 40, 184, 244, 495, 514, 708, 798
SlaI CTCGAG 1 cut(s) 919
SmaI CCCGGG 1 cut(s) 660
SmlI CTYRAG 2 cut(s) 919, 1106
SmoI CTYRAG 2 cut(s) 919, 1106
Sse9I AATT 4 cut(s) 556, 572, 713, 961
SseBI AGGCCT 1 cut(s) 251
SspI AATATT 1 cut(s) 1067
SspMI CTAG 1 cut(s) 911
SstI GAGCTC 1 cut(s) 315
StuI AGGCCT 1 cut(s) 251
StyD4I CCNGG 7 cut(s) 32, 246, 635, 657, 658, 734, 1200
StyI CCWWGG 2 cut(s) 451, 606
TaaI ACNGT 2 cut(s) 937, 1153
TaqI TCGA 3 cut(s) 86, 330, 920
TaqII GACCGA 1 cut(s) 531
TasI AATT 4 cut(s) 556, 572, 713, 961
TatI WGTACW 1 cut(s) 552
TauI GCSGC 3 cut(s) 181, 324, 342
TfiI GAWTC 4 cut(s) 345, 519, 731, 1001
Tru1I TTAA 2 cut(s) 960, 1071
Tru9I TTAA 2 cut(s) 960, 1071
TscAI CASTG 2 cut(s) 911, 1158
TseI GCWGC 2 cut(s) 372, 789
TspDTI ATGAA 3 cut(s) 706, 1008, 1033
TspGWI ACGGA 3 cut(s) 204, 475, 487
TspMI CCCGGG 1 cut(s) 658
TspRI CASTG 2 cut(s) 911, 1158
Van91I CCANNNNNTGG 1 cut(s) 775
VpaK11BI GGWCC 7 cut(s) 40, 184, 244, 495, 514, 708, 798
XapI RAATTY 1 cut(s) 713
XcmI CCANNNNNNNNNTGG 1 cut(s) 718
XhoI CTCGAG 1 cut(s) 919
XmaI CCCGGG 1 cut(s) 658
XmnI GAANNNNTTC 1 cut(s) 545
XspI CTAG 1 cut(s) 911
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.