Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0001367

Physical Location & Seq

Genomic Coordinates Reverse (-)

45279537 .. 45281564

Gene Structure 2028 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000025360

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1191 bp

ATGACCACCACCGCCTTATCCTCACCTCCCTTTCAATTCCCGGTCCCCGATTTAATGGCCTCCGACTGCGCCCCCGACGACTCCTACTGTCCCTCCCCGGCCCAAAACCCGACTCCGACTCCTCTTCCCCCGGCCCAGCTCCTCAACCTCTCCTTCAACCAGGACCACAGCTGCTTCGCCGCCGGCACTGACCTCGGCTTCCGCATCTACAACTGCGACCCCTTCCGCGAGATCTTCCGCCGCGACTTCGGCCCACGCGGCGCCGTCGGATTGGTCCAGATGCTGTTCCGCTGCAACATCCTCACCATCGTCGGCGGCGGCCCCGACCCCCTCTACTCCCCCAACAAGGTCATGATCTGGGACGACCACCAGTCCCGCTGCATCGGCGAGCTCTCCTTCCGCTCCGAGGTCAAAGCCGTCAAGCTCCGCCGCGACCGCATCGTCGTCGTTTTGGTCCAGAAGATCTTCGTCTACAATTTCGCCGATTTGAAGCTTCTCCATCAGATTGAGACCATCGCCAACCCTAAGGGACTCTGCGAGGTCTCCCACGTCGGGCCTCAGGCGGTGCTCGTCTGCCCGGGGCTCCAGAAAGGTCAAATTCGGGTCGAGCATTACGGGTCGAAGCGGACCAAGTTTATTATGGCCCACGATTCCAGGCTGGCCTGCTTCGCTCTCACGCAGGACGGGAGGTTACTGGCTACGGCCAGCAGTAAGGGGACTTTGATCAGAGTTTTCAATACTCTGGATGGTTCATTGCTGCAAGAGGTAAGGAGAGGAGCAGATAGAGCAGAGATACATAGTCTTGCTTTCTCTGCTAATGCCCAATGGCTAGCTGTCTCGAGTGACAAGGGAACTATCCATGTTTTCAATCTGAAGGTTGATTCAGGATCCTTGGGGAATGATAGACCACGCAGTCCATCAGAGTCCAGTCCTCCTCATCCATCAGGCGTTTCATCTCTCTCTTTCATGAAAGGTGTTCTGCCAAGGTATTTCAGCTCAGAATGGTCAGTGGCTAAATTTCACTTGCACGAAGGTTTAGAGTACATTGTTGCCTTTGGCCACCAAAAGAACACTGTCGTGGTTCTTGGCATGGACGGAAGCTTCTATCGATGTGAATTTGACCCTGTCAATGGAGGAGAAATGACTCAGCTTGAATATTATAATTTCTTGAAGCCAGAAGAAACCTTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000045 GO:0000407 GO:0000422 GO:0003674 GO:0005488 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006464 GO:0006497 GO:0006807 GO:0006914 GO:0006996 GO:0007005 GO:0007033 GO:0008104 GO:0008150 GO:0008152 GO:0008289 GO:0009056 GO:0009058 GO:0009059 GO:0009987 GO:0016020 GO:0016043 GO:0016236 GO:0019538 GO:0019898 GO:0022411 GO:0022607 GO:0032266 GO:0033036 GO:0034045 GO:0034497 GO:0034613 GO:0034645 GO:0035091 GO:0036211 GO:0042157 GO:0042158 GO:0043167 GO:0043168 GO:0043170 GO:0043412 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044260 GO:0044267 GO:0044424 GO:0044425 GO:0044444 GO:0044464 GO:0044804 GO:0051179 GO:0051641 GO:0061726 GO:0061919 GO:0070727 GO:0070925 GO:0071704 GO:0071840 GO:0080025 GO:0098805 GO:1901564 GO:1901566 GO:1901576 GO:1901981 GO:1902936 GO:1903008 GO:1905037

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WD40

Protein Analysis

397

Amino Acids

43.86

Weight (kDa)

7.17

Isoelectric Point (pI)

44.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PROPPIN	PF21032	49 - 310	1.2e-34	PROPPIN
Beta-prop_THOC3	PF25174	115 - 292	1.7e-13	THOC3 beta-propeller domain
WD40_Prp19	PF24814	117 - 292	2e-07	Prp19 WD40 domain
WD40_CDC20-Fz	PF24807	144 - 322	3.4e-07	CDC20/Fizzy WD40 domain
Beta-prop_WDR3_1st	PF25173	149 - 293	7.2e-08	WDR3 first beta-propeller domain
Beta-prop_EML_2	PF23414	196 - 292	2.3e-07	Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR5	PF25175	209 - 291	1e-07	WDR5 beta-propeller domain
WD40_WDHD1_1st	PF24817	210 - 293	1e-05	WDHD1 first WD40 domain
Beta-prop_WDR5	PF25175	215 - 292	3e-07	WDR5 beta-propeller domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0001367)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G62770 AT3G62770
fragaria_vesca	FvH4_2g25170 FvH4_6g06350 FvH4_6g06350 FvH4_6g06350 FvH4_6g06370 FvH4_6g06370 FvH4_6g06370 FvH4_6g06370
malus_domestica	MD03G1283100.v1.1 MD04G1202000.v1.1 MD11G1303400.v1.1 MD12G1216000.v1.1 MD12G1216100.v1.1
prunus_persica	Prupe.6G322300_v2.0.a1 Prupe.8G256500_v2.0.a1
pyrus_communis	pycom03g22400 pycom04g17820 pycom11g26510 pycom12g20160
rosa_chinensis	RchiOBHm_Chr3g0455431 RchiOBHm_Chr3g0455461 RchiOBHm_Chr6g0293291
rosa_laevigata	RLG00000011961 RLG00000025360 RLG00000025363
rosa_multiflora	Rmu_sc0003728.1_g000001 Rmu_sc0008350.1_g000001 Rmu_ssc0000162.1_g000036
rosa_roxburghii	Rroxscaffold_6G00424260 Rroxscaffold_6G00424290 Rroxscaffold_7G00174280
rosa_rugosa	Rorug03G0007500 Rorug03G0007800 Rorug06G0234300
rosa_samantha	Rh2AG090700 Rh3AG066800 Rh3AG067200 Rh3BG069200 Rh3BG069500 Rh3CG067600 Rh3CG068000 Rh3DG069200 Rh3DG069500 Rh5BG179700 Rh6AG347100 Rh6BG354400 Rh6CG214700 Rh6DG204600
rosa_wichuraiana	Rw3G005280 Rw3G005310 Rw6G030210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1161
AasI	GACNNNNNNGTC	2 cut(s)	440, 912
AccB1I	GGYRCC	1 cut(s)	260
AccBSI	CCGCTC	1 cut(s)	402
AccI	GTMKAC	1 cut(s)	471
AccII	CGCG	4 cut(s)	228, 243, 258, 432
AclWI	GGATC	2 cut(s)	882, 895
AcoI	YGGCCR	2 cut(s)	702, 1057
AcsI	RAATTY	3 cut(s)	597, 1016, 1115
AcuI	CTGAAG	1 cut(s)	893
AcyI	GRCGYC	1 cut(s)	261
AfaI	GTAC	1 cut(s)	1043
AfiI	CCNNNNNNNGG	4 cut(s)	346, 406, 552, 1130
AgsI	TTSAA	7 cut(s)	35, 157, 490, 736, 868, 1154, 1171
AhdI	GACNNNNNGTC	1 cut(s)	370
AjiI	CACGTC	1 cut(s)	550
AjnI	CCWGG	2 cut(s)	159, 653
AleI	CACNNNNGTG	1 cut(s)	1076
AluBI	AGCT	9 cut(s)	139, 171, 391, 424, 493, 833, 996, 1101, 1150
AluI	AGCT	9 cut(s)	139, 171, 391, 424, 493, 833, 996, 1101, 1150
Alw21I	GWGCWC	2 cut(s)	393, 570
Alw26I	GTCTC	3 cut(s)	503, 547, 841
AlwI	GGATC	2 cut(s)	882, 895
AlwNI	CAGNNNCTG	1 cut(s)	283
Ama87I	CYCGRG	2 cut(s)	577, 838
ApeKI	GCWGC	4 cut(s)	171, 291, 378, 757
ApoI	RAATTY	3 cut(s)	597, 1016, 1115
Asp700I	GAANNNNTTC	1 cut(s)	464
AspLEI	GCGC	2 cut(s)	71, 263
AsuC2I	CCSGG	5 cut(s)	41, 98, 131, 578, 579
AsuHPI	GGTGA	2 cut(s)	15, 295
AsuNHI	GCTAGC	1 cut(s)	829
AvaI	CYCGRG	2 cut(s)	577, 838
AvaII	GGWCC	5 cut(s)	43, 163, 274, 454, 627
AxyI	CCTNAGG	2 cut(s)	525, 558
BalI	TGGCCA	1 cut(s)	1059
BamHI	GGATCC	1 cut(s)	887
BanI	GGYRCC	1 cut(s)	260
BanII	GRGCYC	2 cut(s)	393, 585
Bbv12I	GWGCWC	2 cut(s)	393, 570
BbvI	GCAGC	4 cut(s)	158, 278, 365, 744
BccI	CCATC	6 cut(s)	314, 507, 521, 740, 925, 949
BceAI	ACGGC	3 cut(s)	248, 401, 717
BcgI	CGANNNNNNTGC	4 cut(s)	175, 209, 427, 461
BciT130I	CCWGG	2 cut(s)	161, 655
BclI	TGATCA	1 cut(s)	723
BcnI	CCSGG	5 cut(s)	41, 98, 131, 578, 579
BcoDI	GTCTC	3 cut(s)	503, 547, 841
BfaI	CTAG	1 cut(s)	830
BfoI	RGCGCY	1 cut(s)	264
BglI	GCCNNNNNGGC	1 cut(s)	258
BglII	AGATCT	2 cut(s)	231, 462
Bme1390I	CCNGG	7 cut(s)	41, 98, 131, 161, 578, 579, 655
Bme18I	GGWCC	5 cut(s)	43, 163, 274, 454, 627
BmeRI	GACNNNNNGTC	1 cut(s)	370
BmeT110I	CYCGRG	2 cut(s)	577, 838
BmgBI	CACGTC	1 cut(s)	550
BmiI	GGNNCC	5 cut(s)	45, 262, 322, 584, 889
BmrFI	CCNGG	7 cut(s)	41, 98, 131, 161, 578, 579, 655
BmsI	GCATC	4 cut(s)	213, 270, 390, 447
BmtI	GCTAGC	1 cut(s)	833
BpmI	CTGGAG	1 cut(s)	569
BpuMI	CCSGG	5 cut(s)	41, 98, 131, 578, 579
Bsa29I	ATCGAT	1 cut(s)	1108
BsaHI	GRCGYC	1 cut(s)	261
BsaI	GGTCTC	2 cut(s)	503, 547
BsaJI	CCNNGG	8 cut(s)	96, 129, 193, 405, 577, 578, 891, 983
BsaXI	ACNNNNNCTCC	4 cut(s)	77, 103, 107, 133
Bsc4I	CCNNNNNNNGG	4 cut(s)	346, 406, 552, 1130
Bse118I	RCCGGY	1 cut(s)	182
Bse1I	ACTGG	3 cut(s)	370, 699, 927
Bse21I	CCTNAGG	2 cut(s)	525, 558
Bse3DI	GCAATG	1 cut(s)	752
BseBI	CCWGG	2 cut(s)	161, 655
BseCI	ATCGAT	1 cut(s)	1108
BseDI	CCNNGG	8 cut(s)	96, 129, 193, 405, 577, 578, 891, 983
BseGI	GGATG	3 cut(s)	297, 751, 937
BseLI	CCNNNNNNNGG	4 cut(s)	346, 406, 552, 1130
BseMI	GCAATG	1 cut(s)	752
BseMII	CTCAG	3 cut(s)	572, 1011, 1160
BseNI	ACTGG	3 cut(s)	370, 699, 927
BseRI	GAGGAG	5 cut(s)	111, 131, 789, 924, 1149
BseXI	GCAGC	4 cut(s)	158, 278, 365, 744
BseYI	CCCAGC	1 cut(s)	135
Bsh1236I	CGCG	4 cut(s)	228, 243, 258, 432
Bsh1285I	CGRYCG	1 cut(s)	436
BshNI	GGYRCC	1 cut(s)	260
BshVI	ATCGAT	1 cut(s)	1108
BsiEI	CGRYCG	1 cut(s)	436
BsiHKAI	GWGCWC	2 cut(s)	393, 570
BsiHKCI	CYCGRG	2 cut(s)	577, 838
BsiSI	CCGG	5 cut(s)	41, 98, 131, 183, 578
BslFI	GGGAC	6 cut(s)	29, 75, 358, 374, 543, 730
BslI	CCNNNNNNNGG	4 cut(s)	346, 406, 552, 1130
BsmAI	GTCTC	3 cut(s)	503, 547, 841
BsmFI	GGGAC	6 cut(s)	29, 75, 358, 374, 543, 730
Bso31I	GGTCTC	2 cut(s)	503, 547
BsoBI	CYCGRG	2 cut(s)	577, 838
Bsp1286I	GDGCHC	3 cut(s)	393, 570, 585
Bsp143I	GATC	5 cut(s)	231, 354, 462, 723, 887
BspCNI	CTCAG	3 cut(s)	571, 1010, 1159
BspDI	ATCGAT	1 cut(s)	1108
BspFNI	CGCG	4 cut(s)	228, 243, 258, 432
BspHI	TCATGA	2 cut(s)	351, 966
BspLI	GGNNCC	5 cut(s)	45, 262, 322, 584, 889
BspOI	GCTAGC	1 cut(s)	833
BspPI	GGATC	2 cut(s)	882, 895
BspT107I	GGYRCC	1 cut(s)	260
BspTNI	GGTCTC	2 cut(s)	503, 547
BsrBI	CCGCTC	1 cut(s)	402
BsrDI	GCAATG	1 cut(s)	752
BsrFI	RCCGGY	1 cut(s)	182
BsrI	ACTGG	3 cut(s)	370, 699, 927
BssAI	RCCGGY	1 cut(s)	182
BssECI	CCNNGG	8 cut(s)	96, 129, 193, 405, 577, 578, 891, 983
BssMI	GATC	5 cut(s)	231, 354, 462, 723, 887
BssNI	GRCGYC	1 cut(s)	261
BssT1I	CCWWGG	2 cut(s)	891, 983
Bst2UI	CCWGG	2 cut(s)	161, 655
Bst4CI	ACNGT	2 cut(s)	89, 1075
Bst6I	CTCTTC	1 cut(s)	129
BstACI	GRCGYC	1 cut(s)	261
BstC8I	GCNNGC	6 cut(s)	184, 389, 660, 664, 706, 831
BstDEI	CTNAG	4 cut(s)	525, 558, 997, 1146
BstF5I	GGATG	3 cut(s)	297, 751, 937
BstFNI	CGCG	4 cut(s)	228, 243, 258, 432
BstH2I	RGCGCY	1 cut(s)	264
BstHHI	GCGC	2 cut(s)	71, 263
BstKTI	GATC	5 cut(s)	234, 357, 465, 726, 890
BstMAI	GTCTC	3 cut(s)	503, 547, 841
BstMBI	GATC	5 cut(s)	231, 354, 462, 723, 887
BstMCI	CGRYCG	1 cut(s)	436
BstMWI	GCNNNNNNNGC	7 cut(s)	249, 258, 384, 435, 668, 785, 812
BstNI	CCWGG	2 cut(s)	161, 655
BstSCI	CCNGG	7 cut(s)	39, 96, 129, 159, 576, 577, 653
BstUI	CGCG	4 cut(s)	228, 243, 258, 432
BstV1I	GCAGC	4 cut(s)	158, 278, 365, 744
BstX2I	RGATCY	3 cut(s)	231, 462, 887
BstYI	RGATCY	3 cut(s)	231, 462, 887
Bsu15I	ATCGAT	1 cut(s)	1108
Bsu36I	CCTNAGG	2 cut(s)	525, 558
BsuTUI	ATCGAT	1 cut(s)	1108
BtgZI	GCGATG	1 cut(s)	499
BtrI	CACGTC	1 cut(s)	550
BtsCI	GGATG	3 cut(s)	297, 751, 937
BtsIMutI	CAGTG	3 cut(s)	186, 1014, 1071
Cac8I	GCNNGC	6 cut(s)	184, 389, 660, 664, 706, 831
CaiI	CAGNNNCTG	1 cut(s)	283
CciI	TCATGA	2 cut(s)	351, 966
CfoI	GCGC	2 cut(s)	71, 263
Cfr10I	RCCGGY	1 cut(s)	182
Cfr9I	CCCGGG	1 cut(s)	577
ClaI	ATCGAT	1 cut(s)	1108
Csp6I	GTAC	1 cut(s)	1042
CviAII	CATG	4 cut(s)	352, 860, 967, 1090
CviQI	GTAC	1 cut(s)	1042
DdeI	CTNAG	4 cut(s)	525, 558, 997, 1146
DinI	GGCGCC	1 cut(s)	262
DpnI	GATC	5 cut(s)	233, 356, 464, 725, 889
DpnII	GATC	5 cut(s)	231, 354, 462, 723, 887
DrdI	GACNNNNNNGTC	2 cut(s)	440, 912
DriI	GACNNNNNGTC	1 cut(s)	370
DseDI	GACNNNNNNGTC	2 cut(s)	440, 912
EaeI	YGGCCR	2 cut(s)	702, 1057
Eam1104I	CTCTTC	1 cut(s)	129
Eam1105I	GACNNNNNGTC	1 cut(s)	370
EarI	CTCTTC	1 cut(s)	129
EciI	GGCGGA	2 cut(s)	227, 416
Ecl136II	GAGCTC	1 cut(s)	391
Eco130I	CCWWGG	2 cut(s)	891, 983
Eco24I	GRGCYC	2 cut(s)	393, 585
Eco31I	GGTCTC	2 cut(s)	503, 547
Eco47I	GGWCC	5 cut(s)	43, 163, 274, 454, 627
Eco53kI	GAGCTC	1 cut(s)	391
Eco57I	CTGAAG	1 cut(s)	893
Eco81I	CCTNAGG	2 cut(s)	525, 558
Eco88I	CYCGRG	2 cut(s)	577, 838
EcoICRI	GAGCTC	1 cut(s)	391
EcoRII	CCWGG	2 cut(s)	159, 653
EcoT14I	CCWWGG	2 cut(s)	891, 983
EcoT38I	GRGCYC	2 cut(s)	393, 585
EgeI	GGCGCC	1 cut(s)	262
EheI	GGCGCC	1 cut(s)	262
ErhI	CCWWGG	2 cut(s)	891, 983
FaeI	CATG	4 cut(s)	355, 863, 970, 1093
FaiI	YATR	7 cut(s)	353, 641, 798, 861, 968, 1091, 1161
FaqI	GGGAC	6 cut(s)	29, 75, 358, 374, 543, 730
FatI	CATG	4 cut(s)	351, 859, 966, 1089
FauI	CCCGC	1 cut(s)	383
FbaI	TGATCA	1 cut(s)	723
FblI	GTMKAC	1 cut(s)	471
FokI	GGATG	3 cut(s)	284, 758, 924
FriOI	GRGCYC	2 cut(s)	393, 585
FspBI	CTAG	1 cut(s)	830
GlaI	GCGC	2 cut(s)	70, 262
GsaI	CCCAGC	1 cut(s)	139
GsuI	CTGGAG	1 cut(s)	569
HaeII	RGCGCY	1 cut(s)	264
HapII	CCGG	5 cut(s)	41, 98, 131, 183, 578
HhaI	GCGC	2 cut(s)	71, 263
Hin1I	GRCGYC	1 cut(s)	261
Hin1II	CATG	4 cut(s)	355, 863, 970, 1093
Hin6I	GCGC	2 cut(s)	69, 261
HinP1I	GCGC	2 cut(s)	69, 261
HindIII	AAGCTT	2 cut(s)	491, 1099
HinfI	GANTC	8 cut(s)	80, 112, 118, 531, 650, 881, 923, 1144
HpaII	CCGG	5 cut(s)	41, 98, 131, 183, 578
HphI	GGTGA	2 cut(s)	15, 295
Hpy166II	GTNNAC	1 cut(s)	472
Hpy188III	TCNNGA	9 cut(s)	277, 352, 457, 586, 743, 838, 885, 967, 1168
Hpy8I	GTNNAC	1 cut(s)	472
Hpy99I	CGWCG	6 cut(s)	80, 269, 314, 446, 449, 554
HpyAV	CCTTC	5 cut(s)	163, 232, 406, 868, 1025
HpyCH4III	ACNGT	2 cut(s)	89, 1075
HpyCH4IV	ACGT	1 cut(s)	549
HpyCH4V	TGCA	4 cut(s)	294, 381, 760, 1027
HpyF10VI	GCNNNNNNNGC	7 cut(s)	249, 258, 384, 435, 668, 785, 812
HpyF3I	CTNAG	4 cut(s)	525, 558, 997, 1146
HpySE526I	ACGT	1 cut(s)	549
Hsp92I	GRCGYC	1 cut(s)	261
Hsp92II	CATG	4 cut(s)	355, 863, 970, 1093
HspAI	GCGC	2 cut(s)	69, 261
KasI	GGCGCC	1 cut(s)	260
KroI	GCCGGC	1 cut(s)	182
KroNI	GCCGGC	1 cut(s)	184
Ksp22I	TGATCA	1 cut(s)	723
Kzo9I	GATC	5 cut(s)	231, 354, 462, 723, 887
LmnI	GCTCC	5 cut(s)	144, 407, 429, 588, 776
Lsp1109I	GCAGC	4 cut(s)	158, 278, 365, 744
LweI	GCATC	4 cut(s)	213, 270, 390, 447
MaeI	CTAG	1 cut(s)	830
MaeII	ACGT	1 cut(s)	549
MaeIII	GTNAC	2 cut(s)	690, 842
MalI	GATC	5 cut(s)	233, 356, 464, 725, 889
MbiI	CCGCTC	1 cut(s)	402
MboI	GATC	5 cut(s)	231, 354, 462, 723, 887
MboII	GAAGA	5 cut(s)	116, 226, 457, 472, 1190
MflI	RGATCY	3 cut(s)	231, 462, 887
MhlI	GDGCHC	3 cut(s)	393, 570, 585
MlsI	TGGCCA	1 cut(s)	1059
MluCI	AATT	6 cut(s)	35, 475, 597, 1016, 1115, 1162
MluNI	TGGCCA	1 cut(s)	1059
Mly113I	GGCGCC	1 cut(s)	261
MlyI	GAGTC	6 cut(s)	74, 106, 112, 525, 932, 1138
MmeI	TCCRAC	3 cut(s)	87, 140, 247
Mox20I	TGGCCA	1 cut(s)	1059
MroNI	GCCGGC	1 cut(s)	182
MroXI	GAANNNNTTC	1 cut(s)	464
MscI	TGGCCA	1 cut(s)	1059
MseI	TTAA	1 cut(s)	53
MslI	CAYNNNNRTG	1 cut(s)	1076
Msp20I	TGGCCA	1 cut(s)	1059
MspA1I	CMGCKG	3 cut(s)	171, 291, 378
MspI	CCGG	5 cut(s)	41, 98, 131, 183, 578
MspR9I	CCNGG	7 cut(s)	41, 98, 131, 161, 578, 579, 655
MvaI	CCWGG	2 cut(s)	161, 655
MvnI	CGCG	4 cut(s)	228, 243, 258, 432
MwoI	GCNNNNNNNGC	7 cut(s)	249, 258, 384, 435, 668, 785, 812
NaeI	GCCGGC	1 cut(s)	184
NarI	GGCGCC	1 cut(s)	261
NciI	CCSGG	5 cut(s)	41, 98, 131, 578, 579
NdeII	GATC	5 cut(s)	231, 354, 462, 723, 887
NgoMIV	GCCGGC	1 cut(s)	182
NheI	GCTAGC	1 cut(s)	829
NlaIII	CATG	4 cut(s)	355, 863, 970, 1093
NlaIV	GGNNCC	5 cut(s)	45, 262, 322, 584, 889
NmeAIII	GCCGAG	1 cut(s)	174
NmuCI	GTSAC	1 cut(s)	842
OliI	CACNNNNGTG	1 cut(s)	1076
PaeR7I	CTCGAG	1 cut(s)	838
PagI	TCATGA	2 cut(s)	351, 966
PdiI	GCCGGC	1 cut(s)	184
PdmI	GAANNNNTTC	1 cut(s)	464
PfeI	GAWTC	2 cut(s)	650, 881
PflFI	GACNNNGTC	1 cut(s)	1124
PleI	GAGTC	6 cut(s)	74, 106, 112, 525, 931, 1138
PluTI	GGCGCC	1 cut(s)	264
PpsI	GAGTC	6 cut(s)	74, 106, 112, 525, 931, 1138
PsiI	TTATAA	1 cut(s)	1161
Psp124BI	GAGCTC	1 cut(s)	393
Psp6I	CCWGG	2 cut(s)	159, 653
PspFI	CCCAGC	1 cut(s)	135
PspGI	CCWGG	2 cut(s)	159, 653
PspN4I	GGNNCC	5 cut(s)	45, 262, 322, 584, 889
PstNI	CAGNNNCTG	1 cut(s)	283
PsuI	RGATCY	3 cut(s)	231, 462, 887
PsyI	GACNNNGTC	1 cut(s)	1124
PvuII	CAGCTG	1 cut(s)	171
RsaI	GTAC	1 cut(s)	1043
RsaNI	GTAC	1 cut(s)	1042
RseI	CAYNNNNRTG	1 cut(s)	1076
SacI	GAGCTC	1 cut(s)	393
SaqAI	TTAA	1 cut(s)	53
Sau3AI	GATC	5 cut(s)	231, 354, 462, 723, 887
SchI	GAGTC	6 cut(s)	74, 106, 112, 525, 932, 1138
ScrFI	CCNGG	7 cut(s)	41, 98, 131, 161, 578, 579, 655
SduI	GDGCHC	3 cut(s)	393, 570, 585
SfaNI	GCATC	4 cut(s)	213, 270, 390, 447
SfoI	GGCGCC	1 cut(s)	262
Sfr274I	CTCGAG	1 cut(s)	838
SinI	GGWCC	5 cut(s)	43, 163, 274, 454, 627
SlaI	CTCGAG	1 cut(s)	838
SmaI	CCCGGG	1 cut(s)	579
SmiMI	CAYNNNNRTG	1 cut(s)	1076
SmlI	CTYRAG	1 cut(s)	838
SmoI	CTYRAG	1 cut(s)	838
Sse9I	AATT	6 cut(s)	35, 475, 597, 1016, 1115, 1162
SspDI	GGCGCC	1 cut(s)	260
SspI	AATATT	1 cut(s)	1157
SspMI	CTAG	1 cut(s)	830
SstI	GAGCTC	1 cut(s)	393
StyD4I	CCNGG	7 cut(s)	39, 96, 129, 159, 576, 577, 653
StyI	CCWWGG	2 cut(s)	891, 983
TaaI	ACNGT	2 cut(s)	89, 1075
TaiI	ACGT	1 cut(s)	552
TaqI	TCGA	4 cut(s)	606, 620, 839, 1108
TasI	AATT	6 cut(s)	35, 475, 597, 1016, 1115, 1162
TatI	WGTACW	1 cut(s)	1041
TauI	GCSGC	6 cut(s)	182, 243, 261, 318, 321, 432
TfiI	GAWTC	2 cut(s)	650, 881
Tru1I	TTAA	1 cut(s)	53
Tru9I	TTAA	1 cut(s)	53
TscAI	CASTG	3 cut(s)	193, 1014, 1078
TseFI	GTSAC	1 cut(s)	842
TseI	GCWGC	4 cut(s)	171, 291, 378, 757
Tsp45I	GTSAC	1 cut(s)	842
TspDTI	ATGAA	4 cut(s)	741, 942, 955, 983
TspGWI	ACGGA	1 cut(s)	1110
TspMI	CCCGGG	1 cut(s)	577
TspRI	CASTG	3 cut(s)	193, 1014, 1078
Tth111I	GACNNNGTC	1 cut(s)	1124
VpaK11BI	GGWCC	5 cut(s)	43, 163, 274, 454, 627
XapI	RAATTY	3 cut(s)	597, 1016, 1115
XcmI	CCANNNNNNNNNTGG	1 cut(s)	637
XhoI	CTCGAG	1 cut(s)	838
XmaI	CCCGGG	1 cut(s)	577
XmiI	GTMKAC	1 cut(s)	471
XmnI	GAANNNNTTC	1 cut(s)	464
XspI	CTAG	1 cut(s)	830

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.