MD03G1283100.v1.1

WD repeat domain phosphoinositide-interacting protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
OG0001367
Physical Location & Seq
Reverse (-)
36331967 .. 36335003
3037 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1283100.v1.1.491

Sequence Viewer

Length: 1290 bp
ATGGCCACCCTCTCCGCCTTCTCGCCTCCCTCCTGGCCCGACCCAAACTCCGCCGCCGACTTCCTCACCGATCCCACCGATCCCACCGACGACAATCCCACCTCTGTCGTTGACTCCAGCGACGACCACCACGACCCCCAATCGCCCCCAAACCCTAACCACAACCTCCACAACAACCACCCATTCTCCTCCTCACCCCCGGAGCCTGCCCCGCCCGCGCCGCGCTCGCCTCCGTCTCTGTTCCACGTCTGCTTCAACCAAGACCACTCCTGCTTCGCCGTGGGGACAGACCACGGGTTCCGGATCTACAACTGCGACCCGTTCCGCGAGCTCTTCCGCCGCGACTTCGACAACGGCGGCGGAATCGGCGTCGTTGAGATGCTATTCCGCTGCAACATCTTGGCCATAGTCGGTGGTGGGCCCGACCCTCAGTACCCGACCAATAAGGTCATGATCTGGGACGACCACCAGGAGCGGTGCATCGGTGAGCTGTCGTTCCGCTCCGTCGTCCGGTCGGTGCGGCTCCGGAGGGACCGTATCGTCGTCGTTTTGGAGCAGAAGATATTCGTGTACAATTTCGCCGACCTGAAGCTGCTGCACCAGATTGAAACTATCGCGAACCCTAAGGGGCTGTGCGCGGTGTCGCAGGTAGCGAGGTCGCTGGTGCTGGTGTGCCCTGGGCTGCAGAAGGGGCAGGTTAGGGTGGAGCATTACGCGTCGAAGCGGACCAAGTTCATTATGGCTCACGATTCCAGACTTGCCTGCTTTGCACTCACGCCGGACGGCCAGCTGCTCGCCACTTCCAGCAACAAAGGGACTCTCGTTCGGATTTTCAATACTCTCGACGGAACTTTGCTACAAGAGGTAAGAAGGGGTGCAGACAGAGCAGAAATCTATAGTTTGGCATTCTCTTCAACTGCCCAGTGGTTAGCGGTCTCAAGTGACAAGGGAACGGTCCATGTTTTTAACCTCAAGGTTAATTCTGGATCCTCTGGAAATGAGAATACCCGAAGTGCATCTGATCCTAATCTTGTGGTTTCATCATCAAACTCTTCTCTTTCTTTCATCAGAGGTGTGCTGCCCAAGTATTTTAGCTCAGAGTGGTCGGTTGCTCAGTTTCGCATGCTTGAGGGTTCTCAGTACATTGTTGCGTTTGGTCACCAAAAGAATACTGTGGTGATTCTTGGCATGGATGGGAGCTTCTATCGATGCGAGTTCGACCCAGTGAACGGAGGAGAGATGACCCAGCTGGAATACCACAACTTTCTAAAGCCAGAAGAAGCCTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000045 GO:0000407 GO:0000422 GO:0001101 GO:0003674 GO:0005488 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006464 GO:0006497 GO:0006807 GO:0006914 GO:0006950 GO:0006952 GO:0006970 GO:0006979 GO:0006996 GO:0007005 GO:0007033 GO:0007275 GO:0007568 GO:0008104 GO:0008150 GO:0008152 GO:0008289 GO:0009056 GO:0009058 GO:0009059 GO:0009414 GO:0009415 GO:0009605 GO:0009607 GO:0009620 GO:0009628 GO:0009651 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0009991 GO:0010035 GO:0010150 GO:0010506 GO:0010508 GO:0016020 GO:0016043 GO:0016236 GO:0019222 GO:0019538 GO:0019898 GO:0022411 GO:0022607 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031667 GO:0032266 GO:0032501 GO:0032502 GO:0033036 GO:0034045 GO:0034497 GO:0034613 GO:0034645 GO:0035091 GO:0036211 GO:0042157 GO:0042158 GO:0042221 GO:0042594 GO:0043167 GO:0043168 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044260 GO:0044267 GO:0044424 GO:0044425 GO:0044444 GO:0044464 GO:0044804 GO:0048366 GO:0048367 GO:0048518 GO:0048522 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051179 GO:0051641 GO:0051704 GO:0051707 GO:0061726 GO:0061919 GO:0065007 GO:0070727 GO:0070925 GO:0071704 GO:0071840 GO:0080025 GO:0090693 GO:0098542 GO:0098805 GO:0099402 GO:1901564 GO:1901566 GO:1901576 GO:1901700 GO:1901981 GO:1902936 GO:1903008 GO:1905037
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
WD40

Protein Analysis

430

Amino Acids

47.52

Weight (kDa)

6.0

Isoelectric Point (pI)

47.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PROPPIN PF21032 83 - 422 1.9e-36 PROPPIN
Beta-prop_THOC3 PF25174 148 - 325 8.9e-13 THOC3 beta-propeller domain
WD40_CDC20-Fz PF24807 177 - 328 2.3e-07 CDC20/Fizzy WD40 domain
Beta-prop_WDR3_1st PF25173 185 - 327 3.1e-07 WDR3 first beta-propeller domain
Beta-prop_EML_2 PF23414 231 - 327 1.8e-07 Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR5 PF25175 248 - 326 2.4e-07 WDR5 beta-propeller domain
WD40_Prp19 PF24814 248 - 397 9.2e-09 Prp19 WD40 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 539
Acc36I ACCTGC 2 cut(s) 637, 685
AccBSI CCGCTC 2 cut(s) 475, 501
AccII CGCG 7 cut(s) 218, 223, 327, 342, 617, 638, 716
AccIII TCCGGA 2 cut(s) 300, 525
AclWI GGATC 6 cut(s) 65, 74, 311, 981, 994, 1016
AcoI YGGCCR 3 cut(s) 3, 402, 784
AcuI CTGAAG 1 cut(s) 608
AcyI GRCGYC 1 cut(s) 369
AfaI GTAC 3 cut(s) 434, 572, 1142
AfiI CCNNNNNNNGG 2 cut(s) 510, 1229
AflIII ACRYGT 1 cut(s) 714
AgsI TTSAA 4 cut(s) 256, 608, 835, 915
AjiI CACGTC 1 cut(s) 247
AjnI CCWGG 3 cut(s) 32, 468, 676
AluBI AGCT 7 cut(s) 331, 490, 592, 790, 1095, 1200, 1249
AluI AGCT 7 cut(s) 331, 490, 592, 790, 1095, 1200, 1249
Alw21I GWGCWC 1 cut(s) 333
Alw26I GTCTC 2 cut(s) 240, 940
AlwI GGATC 6 cut(s) 65, 74, 311, 981, 994, 1016
Aor13HI TCCGGA 2 cut(s) 300, 525
AoxI GGCC 5 cut(s) 3, 35, 402, 419, 784
ApaI GGGCCC 1 cut(s) 423
ApeKI GCWGC 6 cut(s) 390, 592, 595, 682, 790, 1078
Asp700I GAANNNNTTC 1 cut(s) 563
AspLEI GCGC 3 cut(s) 220, 225, 638
AspS9I GGNCC 6 cut(s) 36, 419, 420, 532, 726, 955
AsuC2I CCSGG 1 cut(s) 200
AsuHPI GGTGA 5 cut(s) 58, 186, 497, 1151, 1189
AvaII GGWCC 3 cut(s) 532, 726, 955
AxyI CCTNAGG 1 cut(s) 624
BaeGI GKGCMC 2 cut(s) 423, 677
BalI TGGCCA 2 cut(s) 5, 404
BamHI GGATCC 1 cut(s) 986
BanII GRGCYC 2 cut(s) 333, 423
Bbv12I GWGCWC 1 cut(s) 333
BbvI GCAGC 6 cut(s) 377, 579, 582, 669, 777, 1065
BccI CCATC 1 cut(s) 1187
BceAI ACGGC 3 cut(s) 263, 370, 799
BciT130I CCWGG 3 cut(s) 34, 470, 678
BcnI CCSGG 1 cut(s) 200
BcoDI GTCTC 2 cut(s) 240, 940
BfmI CTRYAG 2 cut(s) 683, 895
BfuAI ACCTGC 2 cut(s) 637, 685
Bme1390I CCNGG 4 cut(s) 34, 200, 470, 678
Bme18I GGWCC 3 cut(s) 532, 726, 955
BmgBI CACGTC 1 cut(s) 247
BmgT120I GGNCC 6 cut(s) 36, 419, 420, 532, 726, 955
BmiI GGNNCC 6 cut(s) 204, 299, 421, 524, 533, 988
BmrFI CCNGG 4 cut(s) 34, 200, 470, 678
BmrI ACTGGG 2 cut(s) 916, 1217
BmsI GCATC 4 cut(s) 369, 489, 1025, 1199
BmuI ACTGGG 2 cut(s) 916, 1217
BpmI CTGGAG 1 cut(s) 100
BpuEI CTTGAG 3 cut(s) 922, 956, 1148
BpuMI CCSGG 1 cut(s) 200
Bsa29I ATCGAT 1 cut(s) 1207
BsaBI GATNNNNATC 1 cut(s) 1026
BsaHI GRCGYC 1 cut(s) 369
BsaI GGTCTC 1 cut(s) 940
BsaJI CCNNGG 5 cut(s) 198, 279, 292, 676, 677
BsaWI WCCGGW 3 cut(s) 300, 510, 525
BsaXI ACNNNNNCTCC 6 cut(s) 32, 62, 170, 200, 520, 550
Bsc4I CCNNNNNNNGG 2 cut(s) 510, 1229
Bse1I ACTGG 2 cut(s) 922, 1223
Bse21I CCTNAGG 1 cut(s) 624
Bse8I GATNNNNATC 1 cut(s) 1026
BseAI TCCGGA 2 cut(s) 300, 525
BseBI CCWGG 3 cut(s) 34, 470, 678
BseCI ATCGAT 1 cut(s) 1207
BseDI CCNNGG 5 cut(s) 198, 279, 292, 676, 677
BseGI GGATG 1 cut(s) 1198
BseJI GATNNNNATC 1 cut(s) 1026
BseLI CCNNNNNNNGG 2 cut(s) 510, 1229
BseMII CTCAG 4 cut(s) 443, 1110, 1127, 1151
BseNI ACTGG 2 cut(s) 922, 1223
BseRI GAGGAG 3 cut(s) 178, 181, 1248
BseSI GKGCMC 2 cut(s) 423, 677
BseXI GCAGC 6 cut(s) 377, 579, 582, 669, 777, 1065
BseYI CCCAGC 1 cut(s) 1245
BsgI GTGCAG 2 cut(s) 581, 897
Bsh1236I CGCG 7 cut(s) 218, 223, 327, 342, 617, 638, 716
Bsh1285I CGRYCG 1 cut(s) 515
BshFI GGCC 5 cut(s) 5, 37, 404, 421, 786
BshVI ATCGAT 1 cut(s) 1207
BsiEI CGRYCG 1 cut(s) 515
BsiHKAI GWGCWC 1 cut(s) 333
BsiSI CCGG 5 cut(s) 200, 301, 511, 526, 779
BslFI GGGAC 4 cut(s) 298, 473, 545, 829
BslI CCNNNNNNNGG 2 cut(s) 510, 1229
BsmAI GTCTC 2 cut(s) 240, 940
BsmBI CGTCTC 1 cut(s) 240
BsmFI GGGAC 4 cut(s) 298, 473, 545, 829
BsmI GAATGC 1 cut(s) 905
BsnI GGCC 5 cut(s) 5, 37, 404, 421, 786
Bso31I GGTCTC 1 cut(s) 940
Bsp120I GGGCCC 1 cut(s) 419
Bsp1286I GDGCHC 3 cut(s) 333, 423, 677
Bsp13I TCCGGA 2 cut(s) 300, 525
Bsp1407I TGTACA 1 cut(s) 570
Bsp143I GATC 6 cut(s) 70, 79, 303, 453, 986, 1021
Bsp68I TCGCGA 1 cut(s) 617
BspANI GGCC 5 cut(s) 5, 37, 404, 421, 786
BspCNI CTCAG 4 cut(s) 442, 1109, 1126, 1150
BspDI ATCGAT 1 cut(s) 1207
BspEI TCCGGA 2 cut(s) 300, 525
BspFNI CGCG 7 cut(s) 218, 223, 327, 342, 617, 638, 716
BspHI TCATGA 1 cut(s) 450
BspLI GGNNCC 6 cut(s) 204, 299, 421, 524, 533, 988
BspMAI CTGCAG 1 cut(s) 687
BspMI ACCTGC 2 cut(s) 637, 685
BspPI GGATC 6 cut(s) 65, 74, 311, 981, 994, 1016
BspQI GCTCTTC 1 cut(s) 338
BspTNI GGTCTC 1 cut(s) 940
BsrBI CCGCTC 2 cut(s) 475, 501
BsrGI TGTACA 1 cut(s) 570
BsrI ACTGG 2 cut(s) 922, 1223
BssECI CCNNGG 5 cut(s) 198, 279, 292, 676, 677
BssMI GATC 6 cut(s) 70, 79, 303, 453, 986, 1021
BssNI GRCGYC 1 cut(s) 369
Bst2UI CCWGG 3 cut(s) 34, 470, 678
Bst4CI ACNGT 3 cut(s) 536, 955, 1174
Bst6I CTCTTC 3 cut(s) 338, 916, 1057
BstACI GRCGYC 1 cut(s) 369
BstAUI TGTACA 1 cut(s) 570
BstC8I GCNNGC 8 cut(s) 207, 216, 227, 329, 763, 788, 795, 1124
BstDEI CTNAG 5 cut(s) 429, 624, 1096, 1113, 1137
BstDSI CCRYGG 2 cut(s) 279, 292
BstEII GGTNACC 1 cut(s) 1157
BstF5I GGATG 1 cut(s) 1198
BstFNI CGCG 7 cut(s) 218, 223, 327, 342, 617, 638, 716
BstHHI GCGC 3 cut(s) 220, 225, 638
BstKTI GATC 6 cut(s) 73, 82, 306, 456, 989, 1024
BstMAI GTCTC 2 cut(s) 240, 940
BstMBI GATC 6 cut(s) 70, 79, 303, 453, 986, 1021
BstMCI CGRYCG 1 cut(s) 515
BstMWI GCNNNNNNNGC 8 cut(s) 211, 215, 220, 226, 366, 691, 767, 884
BstNI CCWGG 3 cut(s) 34, 470, 678
BstNSI RCATGY 1 cut(s) 1126
BstPI GGTNACC 1 cut(s) 1157
BstSCI CCNGG 4 cut(s) 32, 198, 468, 676
BstSFI CTRYAG 2 cut(s) 683, 895
BstSLI GKGCMC 2 cut(s) 423, 677
BstUI CGCG 7 cut(s) 218, 223, 327, 342, 617, 638, 716
BstV1I GCAGC 6 cut(s) 377, 579, 582, 669, 777, 1065
BstX2I RGATCY 2 cut(s) 303, 986
BstYI RGATCY 2 cut(s) 303, 986
Bsu15I ATCGAT 1 cut(s) 1207
Bsu36I CCTNAGG 1 cut(s) 624
BsuRI GGCC 5 cut(s) 5, 37, 404, 421, 786
BsuTUI ATCGAT 1 cut(s) 1207
BtgI CCRYGG 2 cut(s) 279, 292
BtrI CACGTC 1 cut(s) 247
BtsCI GGATG 1 cut(s) 1198
BtsIMutI CAGTG 2 cut(s) 929, 1230
BtuMI TCGCGA 1 cut(s) 617
BveI ACCTGC 2 cut(s) 637, 685
Cac8I GCNNGC 8 cut(s) 207, 216, 227, 329, 763, 788, 795, 1124
CciI TCATGA 1 cut(s) 450
CfoI GCGC 3 cut(s) 220, 225, 638
Cfr13I GGNCC 6 cut(s) 36, 419, 420, 532, 726, 955
ClaI ATCGAT 1 cut(s) 1207
CseI GACGC 2 cut(s) 358, 705
Csp6I GTAC 3 cut(s) 433, 571, 1141
CviAII CATG 4 cut(s) 451, 959, 1123, 1189
CviQI GTAC 3 cut(s) 433, 571, 1141
DdeI CTNAG 5 cut(s) 429, 624, 1096, 1113, 1137
DpnI GATC 6 cut(s) 72, 81, 305, 455, 988, 1023
DpnII GATC 6 cut(s) 70, 79, 303, 453, 986, 1021
DrdI GACNNNNNNGTC 1 cut(s) 539
DseDI GACNNNNNNGTC 1 cut(s) 539
EaeI YGGCCR 3 cut(s) 3, 402, 784
Eam1104I CTCTTC 3 cut(s) 338, 916, 1057
EarI CTCTTC 3 cut(s) 338, 916, 1057
EciI GGCGGA 4 cut(s) 4, 40, 326, 375
Ecl136II GAGCTC 1 cut(s) 331
Eco24I GRGCYC 2 cut(s) 333, 423
Eco31I GGTCTC 1 cut(s) 940
Eco47I GGWCC 3 cut(s) 532, 726, 955
Eco53kI GAGCTC 1 cut(s) 331
Eco57I CTGAAG 1 cut(s) 608
Eco81I CCTNAGG 1 cut(s) 624
Eco91I GGTNACC 1 cut(s) 1157
EcoICRI GAGCTC 1 cut(s) 331
EcoO65I GGTNACC 1 cut(s) 1157
EcoRII CCWGG 3 cut(s) 32, 468, 676
EcoT38I GRGCYC 2 cut(s) 333, 423
Esp3I CGTCTC 1 cut(s) 240
FaeI CATG 4 cut(s) 454, 962, 1126, 1192
FaiI YATR 7 cut(s) 407, 452, 740, 897, 960, 1124, 1190
FaqI GGGAC 4 cut(s) 298, 473, 545, 829
FatI CATG 4 cut(s) 450, 958, 1122, 1188
FauI CCCGC 2 cut(s) 219, 223
FokI GGATG 1 cut(s) 1205
FriOI GRGCYC 2 cut(s) 333, 423
GlaI GCGC 3 cut(s) 219, 224, 637
GsaI CCCAGC 1 cut(s) 1249
GsuI CTGGAG 1 cut(s) 100
HaeIII GGCC 5 cut(s) 5, 37, 404, 421, 786
HapII CCGG 5 cut(s) 200, 301, 511, 526, 779
HgaI GACGC 2 cut(s) 358, 705
HhaI GCGC 3 cut(s) 220, 225, 638
Hin1I GRCGYC 1 cut(s) 369
Hin1II CATG 4 cut(s) 454, 962, 1126, 1192
Hin6I GCGC 3 cut(s) 218, 223, 636
HinP1I GCGC 3 cut(s) 218, 223, 636
HincII GTYRAC 1 cut(s) 112
HindII GTYRAC 1 cut(s) 112
HinfI GANTC 5 cut(s) 113, 363, 749, 817, 1180
HpaII CCGG 5 cut(s) 200, 301, 511, 526, 779
HphI GGTGA 5 cut(s) 58, 186, 497, 1151, 1189
Hpy166II GTNNAC 3 cut(s) 112, 571, 1228
Hpy188I TCNGA 4 cut(s) 828, 1021, 1070, 1099
Hpy188III TCNNGA 9 cut(s) 301, 451, 526, 616, 746, 753, 842, 984, 993
Hpy8I GTNNAC 3 cut(s) 112, 571, 1228
Hpy99I CGWCG 8 cut(s) 92, 125, 374, 509, 545, 548, 721, 848
HpyAV CCTTC 3 cut(s) 28, 682, 864
HpyCH4III ACNGT 3 cut(s) 536, 955, 1174
HpyCH4IV ACGT 1 cut(s) 246
HpyCH4V TGCA 7 cut(s) 393, 480, 598, 685, 770, 878, 1016
HpyF10VI GCNNNNNNNGC 8 cut(s) 211, 215, 220, 226, 366, 691, 767, 884
HpyF3I CTNAG 5 cut(s) 429, 624, 1096, 1113, 1137
HpySE526I ACGT 1 cut(s) 246
Hsp92I GRCGYC 1 cut(s) 369
Hsp92II CATG 4 cut(s) 454, 962, 1126, 1192
HspAI GCGC 3 cut(s) 218, 223, 636
Kpn2I TCCGGA 2 cut(s) 300, 525
Kzo9I GATC 6 cut(s) 70, 79, 303, 453, 986, 1021
LguI GCTCTTC 1 cut(s) 338
LmnI GCTCC 7 cut(s) 202, 472, 506, 528, 553, 706, 1197
Lsp1109I GCAGC 6 cut(s) 377, 579, 582, 669, 777, 1065
LweI GCATC 4 cut(s) 369, 489, 1025, 1199
MaeII ACGT 1 cut(s) 246
MaeIII GTNAC 2 cut(s) 941, 1157
MalI GATC 6 cut(s) 72, 81, 305, 455, 988, 1023
MbiI CCGCTC 2 cut(s) 475, 501
MboI GATC 6 cut(s) 70, 79, 303, 453, 986, 1021
MboII GAAGA 5 cut(s) 325, 571, 903, 1044, 1289
MflI RGATCY 2 cut(s) 303, 986
MhlI GDGCHC 3 cut(s) 333, 423, 677
MlsI TGGCCA 2 cut(s) 5, 404
MluCI AATT 2 cut(s) 574, 979
MluI ACGCGT 1 cut(s) 714
MluNI TGGCCA 2 cut(s) 5, 404
MlyI GAGTC 2 cut(s) 107, 811
Mox20I TGGCCA 2 cut(s) 5, 404
MroI TCCGGA 2 cut(s) 300, 525
MroXI GAANNNNTTC 1 cut(s) 563
MscI TGGCCA 2 cut(s) 5, 404
MseI TTAA 2 cut(s) 966, 978
Msp20I TGGCCA 2 cut(s) 5, 404
MspA1I CMGCKG 3 cut(s) 390, 790, 1249
MspI CCGG 5 cut(s) 200, 301, 511, 526, 779
MspR9I CCNGG 4 cut(s) 34, 200, 470, 678
MteI GCGCNGCGC 1 cut(s) 221
Mva1269I GAATGC 1 cut(s) 905
MvaI CCWGG 3 cut(s) 34, 470, 678
MvnI CGCG 7 cut(s) 218, 223, 327, 342, 617, 638, 716
MwoI GCNNNNNNNGC 8 cut(s) 211, 215, 220, 226, 366, 691, 767, 884
NciI CCSGG 1 cut(s) 200
NdeII GATC 6 cut(s) 70, 79, 303, 453, 986, 1021
NlaIII CATG 4 cut(s) 454, 962, 1126, 1192
NlaIV GGNNCC 6 cut(s) 204, 299, 421, 524, 533, 988
NmuCI GTSAC 2 cut(s) 941, 1157
NruI TCGCGA 1 cut(s) 617
NspI RCATGY 1 cut(s) 1126
PaeI GCATGC 1 cut(s) 1126
PagI TCATGA 1 cut(s) 450
PasI CCCWGGG 1 cut(s) 677
PciSI GCTCTTC 1 cut(s) 338
PcsI WCGNNNNNNNCGW 2 cut(s) 129, 650
PctI GAATGC 1 cut(s) 905
PdmI GAANNNNTTC 1 cut(s) 563
PfeI GAWTC 3 cut(s) 363, 749, 1180
PleI GAGTC 2 cut(s) 107, 811
PpsI GAGTC 2 cut(s) 107, 811
Psp124BI GAGCTC 1 cut(s) 333
Psp6I CCWGG 3 cut(s) 32, 468, 676
PspEI GGTNACC 1 cut(s) 1157
PspFI CCCAGC 1 cut(s) 1245
PspGI CCWGG 3 cut(s) 32, 468, 676
PspN4I GGNNCC 6 cut(s) 204, 299, 421, 524, 533, 988
PspOMI GGGCCC 1 cut(s) 419
PspPI GGNCC 6 cut(s) 36, 419, 420, 532, 726, 955
PstI CTGCAG 1 cut(s) 687
PsuI RGATCY 2 cut(s) 303, 986
PvuII CAGCTG 2 cut(s) 790, 1249
RruI TCGCGA 1 cut(s) 617
RsaI GTAC 3 cut(s) 434, 572, 1142
RsaNI GTAC 3 cut(s) 433, 571, 1141
SacI GAGCTC 1 cut(s) 333
SapI GCTCTTC 1 cut(s) 338
SaqAI TTAA 2 cut(s) 966, 978
Sau3AI GATC 6 cut(s) 70, 79, 303, 453, 986, 1021
Sau96I GGNCC 6 cut(s) 36, 419, 420, 532, 726, 955
SchI GAGTC 2 cut(s) 107, 811
ScrFI CCNGG 4 cut(s) 34, 200, 470, 678
SduI GDGCHC 3 cut(s) 333, 423, 677
SfaNI GCATC 4 cut(s) 369, 489, 1025, 1199
SfcI CTRYAG 2 cut(s) 683, 895
SinI GGWCC 3 cut(s) 532, 726, 955
SmlI CTYRAG 3 cut(s) 937, 971, 1127
SmoI CTYRAG 3 cut(s) 937, 971, 1127
SphI GCATGC 1 cut(s) 1126
Sse9I AATT 2 cut(s) 574, 979
SstI GAGCTC 1 cut(s) 333
StyD4I CCNGG 4 cut(s) 32, 198, 468, 676
TaaI ACNGT 3 cut(s) 536, 955, 1174
TaiI ACGT 1 cut(s) 249
TaqI TCGA 5 cut(s) 348, 719, 843, 1207, 1218
TasI AATT 2 cut(s) 574, 979
TatI WGTACW 2 cut(s) 570, 1140
TauI GCSGC 5 cut(s) 56, 223, 342, 360, 523
TfiI GAWTC 3 cut(s) 363, 749, 1180
Tru1I TTAA 2 cut(s) 966, 978
Tru9I TTAA 2 cut(s) 966, 978
TscAI CASTG 2 cut(s) 929, 1230
TseFI GTSAC 2 cut(s) 941, 1157
TseI GCWGC 6 cut(s) 390, 592, 595, 682, 790, 1078
Tsp45I GTSAC 2 cut(s) 941, 1157
TspDTI ATGAA 3 cut(s) 724, 1029, 1054
TspGWI ACGGA 4 cut(s) 222, 493, 861, 1245
TspRI CASTG 2 cut(s) 929, 1230
VpaK11BI GGWCC 3 cut(s) 532, 726, 955
XceI RCATGY 1 cut(s) 1126
XcmI CCANNNNNNNNNTGG 1 cut(s) 736
XmnI GAANNNNTTC 1 cut(s) 563
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.