MD11G1303400.v1.1

WD repeat domain phosphoinositide-interacting protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0001367
Physical Location & Seq
Forward (+)
41883251 .. 41886982
3732 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1303400.v1.1.491

Sequence Viewer

Length: 1281 bp
ATGGCCACCCTCTCCGCCTTGGCTACCACCTGGCCCGACCCCAACTCCGCCGCCGCCTTCCTCTCCGATCCTACCGATGACAACCCTACCTCTGTCGTTGACTCCAGCGATGACAACCACGACCCCCAATCGCCCCCAAACCCTAACTCTGACCACAACCTCCACAACAACATTCCCCTCTCCTCCTCGCCCCCGGAGTCTGCCCCTCCGGCGCCCCGCTCGCCTCCGTCACTCTTCCACGTCTGCTTTAACCAAGACCAGGCCTGCTTCGCCGTGGGGACAGACCACGGGTTCCGGATCTACAACTGCGACCCGTTCCGCGAGCTCTTCCGCCGTGACTTCGACAACGGGGGCGGAATCGGCGTCGTCGAGATGCTATTTCGCTGCAACATCTTGGCCATAGTTGGCGGTGGGCCCGACCCTCAGTACCCGACCAATAAAGTCATGATCTGGGACGACCACCAGGGGCGGTGCATCGGGGAGCTCTCATTCCGCTCCGTTATCCGGTCCGTGCGGCTCCGGAGGGACCGAATCGTCGTCGTTTTAGAGCAGAAGATATTCGTGTACAATTTCGCCGACTTGAAGCTGCTGCACCAGATTGAGACGATCGCGAACCCCAAGGGGCTGTGCGCGGTGTCGCAGGTGGCGGGGTCGCTGGTGCTGGTGTGCCCTGGCCTGCAGAAGGGGCAGGTTAGGGTGGAGCATTACGGGTCGAAGCGGACCAAGTTCATCATGGCTCATGATTCCAGACTTGCCTGCTTTGCACTCACGCCGGACGGCCAGCTGCTCGCCACCGCCAGCAATAAAGGGACTCTTGTTCGGATTTTCAATACTCTCGACGGAACTTTGCTGCAAGAGGTAAGGAGGGGTGCAGACAGAGCAGAAATCTATAGTTTGGCATTCTCTTCAACTGCCCAGTGGTTAGCAGTCTCAAGTGACAAGGGAACGGTCCATGTTTTCAACCTCAAGGTTAATTCTGGATCCTCAAATGAGAACCCCCGAAGTGCATCTGATCCAAATCTTGCTGTTTCGTCATCAAACTCATCTCTTTCTTTCATCAGAGGTGTGCTGCCCAAGTATTTTAGCTCAGAGTGGTCGGTTGCTCAGTTTCGCTTGCTTGAAGGTTCTCAATACATTGTTGCGTTTGGTCACCAAAAGAATACTGTGGTGATTCTTGGCATGGATGGAAGCTTCTATCGATGTGAGTTTGACCCGGTGAATGGAGGTGAGATGACCCAGCTGGAATATCACAACTTTCTAAAGCCCGAAGAAGCCTTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000045 GO:0000407 GO:0000422 GO:0001101 GO:0003674 GO:0005488 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006464 GO:0006497 GO:0006807 GO:0006914 GO:0006950 GO:0006952 GO:0006970 GO:0006979 GO:0006996 GO:0007005 GO:0007033 GO:0007275 GO:0007568 GO:0008104 GO:0008150 GO:0008152 GO:0008289 GO:0009056 GO:0009058 GO:0009059 GO:0009414 GO:0009415 GO:0009605 GO:0009607 GO:0009620 GO:0009628 GO:0009651 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0009991 GO:0010035 GO:0010150 GO:0010506 GO:0010508 GO:0016020 GO:0016043 GO:0016236 GO:0019222 GO:0019538 GO:0019898 GO:0022411 GO:0022607 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031667 GO:0032266 GO:0032501 GO:0032502 GO:0033036 GO:0034045 GO:0034497 GO:0034613 GO:0034645 GO:0035091 GO:0036211 GO:0042157 GO:0042158 GO:0042221 GO:0042594 GO:0043167 GO:0043168 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044260 GO:0044267 GO:0044424 GO:0044425 GO:0044444 GO:0044464 GO:0044804 GO:0048366 GO:0048367 GO:0048518 GO:0048522 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051179 GO:0051641 GO:0051704 GO:0051707 GO:0061726 GO:0061919 GO:0065007 GO:0070727 GO:0070925 GO:0071704 GO:0071840 GO:0080025 GO:0090693 GO:0098542 GO:0098805 GO:0099402 GO:1901564 GO:1901566 GO:1901576 GO:1901700 GO:1901981 GO:1902936 GO:1903008 GO:1905037
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
WD40

Protein Analysis

427

Amino Acids

46.81

Weight (kDa)

5.95

Isoelectric Point (pI)

43.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PROPPIN PF21032 81 - 419 1.7e-38 PROPPIN
Beta-prop_THOC3 PF25174 146 - 323 6e-13 THOC3 beta-propeller domain
WD40_CDC20-Fz PF24807 175 - 326 1.1e-06 CDC20/Fizzy WD40 domain
Beta-prop_WDR3_1st PF25173 184 - 325 1.4e-06 WDR3 first beta-propeller domain
Beta-prop_EML_2 PF23414 229 - 324 3.7e-07 Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR5 PF25175 246 - 324 2e-07 WDR5 beta-propeller domain
WD40_Prp19 PF24814 247 - 354 8.5e-09 Prp19 WD40 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 631
AasI GACNNNNNNGTC 1 cut(s) 533
Acc36I ACCTGC 2 cut(s) 631, 679
AccB1I GGYRCC 1 cut(s) 211
AccBSI CCGCTC 2 cut(s) 219, 495
AccII CGCG 3 cut(s) 321, 611, 632
AccIII TCCGGA 2 cut(s) 294, 519
AclWI GGATC 5 cut(s) 62, 305, 975, 988, 1007
AcoI YGGCCR 3 cut(s) 3, 396, 778
AcyI GRCGYC 2 cut(s) 212, 363
AfaI GTAC 2 cut(s) 428, 566
AfiI CCNNNNNNNGG 4 cut(s) 259, 504, 682, 1220
AgsI TTSAA 5 cut(s) 583, 829, 909, 961, 1121
AjiI CACGTC 1 cut(s) 241
AjnI CCWGG 4 cut(s) 29, 258, 462, 670
AluBI AGCT 7 cut(s) 325, 484, 586, 784, 1086, 1191, 1240
AluI AGCT 7 cut(s) 325, 484, 586, 784, 1086, 1191, 1240
Alw21I GWGCWC 2 cut(s) 327, 486
Alw26I GTCTC 2 cut(s) 596, 934
AlwI GGATC 5 cut(s) 62, 305, 975, 988, 1007
Aor13HI TCCGGA 2 cut(s) 294, 519
AoxI GGCC 7 cut(s) 3, 32, 261, 396, 413, 673, 778
ApaI GGGCCC 1 cut(s) 417
ApeKI GCWGC 6 cut(s) 384, 586, 589, 784, 850, 1069
Asp700I GAANNNNTTC 1 cut(s) 557
AspLEI GCGC 2 cut(s) 214, 632
AspS9I GGNCC 7 cut(s) 33, 413, 414, 507, 526, 720, 949
AsuC2I CCSGG 2 cut(s) 194, 1214
AsuHPI GGTGA 4 cut(s) 1142, 1180, 1228, 1238
AvaII GGWCC 4 cut(s) 507, 526, 720, 949
BaeGI GKGCMC 2 cut(s) 417, 671
BalI TGGCCA 2 cut(s) 5, 398
BamHI GGATCC 1 cut(s) 980
BanI GGYRCC 1 cut(s) 211
BanII GRGCYC 3 cut(s) 327, 417, 486
Bbv12I GWGCWC 2 cut(s) 327, 486
BbvI GCAGC 6 cut(s) 371, 573, 576, 771, 837, 1056
BccI CCATC 1 cut(s) 1178
BceAI ACGGC 3 cut(s) 257, 318, 793
BciT130I CCWGG 4 cut(s) 31, 260, 464, 672
BcnI CCSGG 2 cut(s) 194, 1214
BcoDI GTCTC 2 cut(s) 596, 934
BfmI CTRYAG 2 cut(s) 677, 889
BfoI RGCGCY 1 cut(s) 215
BfuAI ACCTGC 2 cut(s) 631, 679
BglI GCCNNNNNGGC 1 cut(s) 209
BisI GCNGC 9 cut(s) 51, 54, 385, 515, 587, 590, 785, 851, 1070
BlsI GCNGC 9 cut(s) 52, 55, 386, 516, 588, 591, 786, 852, 1071
Bme1390I CCNGG 6 cut(s) 31, 194, 260, 464, 672, 1214
Bme18I GGWCC 4 cut(s) 507, 526, 720, 949
BmgBI CACGTC 1 cut(s) 241
BmgT120I GGNCC 7 cut(s) 33, 413, 414, 507, 526, 720, 949
BmiI GGNNCC 6 cut(s) 213, 293, 415, 518, 527, 982
BmrFI CCNGG 6 cut(s) 31, 194, 260, 464, 672, 1214
BmrI ACTGGG 1 cut(s) 910
BmsI GCATC 3 cut(s) 363, 483, 1016
BmuI ACTGGG 1 cut(s) 910
BpmI CTGGAG 1 cut(s) 88
BpuEI CTTGAG 2 cut(s) 916, 950
BpuMI CCSGG 2 cut(s) 194, 1214
Bsa29I ATCGAT 1 cut(s) 1198
BsaBI GATNNNNATC 1 cut(s) 1017
BsaHI GRCGYC 2 cut(s) 212, 363
BsaJI CCNNGG 7 cut(s) 18, 192, 273, 286, 463, 618, 670
BsaWI WCCGGW 3 cut(s) 294, 504, 519
BsaXI ACNNNNNCTCC 2 cut(s) 29, 59
Bsc4I CCNNNNNNNGG 4 cut(s) 259, 504, 682, 1220
Bse1I ACTGG 1 cut(s) 916
Bse8I GATNNNNATC 1 cut(s) 1017
BseAI TCCGGA 2 cut(s) 294, 519
BseBI CCWGG 4 cut(s) 31, 260, 464, 672
BseCI ATCGAT 1 cut(s) 1198
BseDI CCNNGG 7 cut(s) 18, 192, 273, 286, 463, 618, 670
BseGI GGATG 1 cut(s) 1189
BseJI GATNNNNATC 1 cut(s) 1017
BseLI CCNNNNNNNGG 4 cut(s) 259, 504, 682, 1220
BseMII CTCAG 3 cut(s) 437, 1101, 1118
BseNI ACTGG 1 cut(s) 916
BseRI GAGGAG 2 cut(s) 172, 175
BseSI GKGCMC 2 cut(s) 417, 671
BseXI GCAGC 6 cut(s) 371, 573, 576, 771, 837, 1056
BseYI CCCAGC 1 cut(s) 1236
BsgI GTGCAG 2 cut(s) 575, 891
Bsh1236I CGCG 3 cut(s) 321, 611, 632
Bsh1285I CGRYCG 1 cut(s) 609
BshFI GGCC 7 cut(s) 5, 34, 263, 398, 415, 675, 780
BshNI GGYRCC 1 cut(s) 211
BshVI ATCGAT 1 cut(s) 1198
BsiEI CGRYCG 1 cut(s) 609
BsiHKAI GWGCWC 2 cut(s) 327, 486
BsiSI CCGG 7 cut(s) 194, 209, 295, 505, 520, 773, 1214
BslFI GGGAC 4 cut(s) 292, 467, 539, 823
BslI CCNNNNNNNGG 4 cut(s) 259, 504, 682, 1220
BsmAI GTCTC 2 cut(s) 596, 934
BsmBI CGTCTC 1 cut(s) 596
BsmFI GGGAC 4 cut(s) 292, 467, 539, 823
BsmI GAATGC 1 cut(s) 899
BsnI GGCC 7 cut(s) 5, 34, 263, 398, 415, 675, 780
Bsp120I GGGCCC 1 cut(s) 413
Bsp1286I GDGCHC 4 cut(s) 327, 417, 486, 671
Bsp13I TCCGGA 2 cut(s) 294, 519
Bsp1407I TGTACA 1 cut(s) 564
Bsp143I GATC 6 cut(s) 67, 297, 447, 606, 980, 1012
Bsp68I TCGCGA 1 cut(s) 611
BspANI GGCC 7 cut(s) 5, 34, 263, 398, 415, 675, 780
BspCNI CTCAG 3 cut(s) 436, 1100, 1117
BspDI ATCGAT 1 cut(s) 1198
BspEI TCCGGA 2 cut(s) 294, 519
BspFNI CGCG 3 cut(s) 321, 611, 632
BspHI TCATGA 2 cut(s) 444, 739
BspLI GGNNCC 6 cut(s) 213, 293, 415, 518, 527, 982
BspMAI CTGCAG 1 cut(s) 681
BspMI ACCTGC 2 cut(s) 631, 679
BspPI GGATC 5 cut(s) 62, 305, 975, 988, 1007
BspQI GCTCTTC 1 cut(s) 332
BspT107I GGYRCC 1 cut(s) 211
BsrBI CCGCTC 2 cut(s) 219, 495
BsrGI TGTACA 1 cut(s) 564
BsrI ACTGG 1 cut(s) 916
BssECI CCNNGG 7 cut(s) 18, 192, 273, 286, 463, 618, 670
BssMI GATC 6 cut(s) 67, 297, 447, 606, 980, 1012
BssNI GRCGYC 2 cut(s) 212, 363
BssT1I CCWWGG 2 cut(s) 18, 618
Bst2UI CCWGG 4 cut(s) 31, 260, 464, 672
Bst4CI ACNGT 2 cut(s) 949, 1165
Bst6I CTCTTC 3 cut(s) 239, 332, 910
BstACI GRCGYC 2 cut(s) 212, 363
BstAUI TGTACA 1 cut(s) 564
BstC8I GCNNGC 9 cut(s) 221, 265, 323, 677, 757, 782, 789, 799, 1115
BstDEI CTNAG 3 cut(s) 423, 1087, 1104
BstDSI CCRYGG 2 cut(s) 273, 286
BstEII GGTNACC 1 cut(s) 1148
BstENI CCTNNNNNAGG 1 cut(s) 680
BstF5I GGATG 1 cut(s) 1189
BstFNI CGCG 3 cut(s) 321, 611, 632
BstH2I RGCGCY 1 cut(s) 215
BstHHI GCGC 2 cut(s) 214, 632
BstKTI GATC 6 cut(s) 70, 300, 450, 609, 983, 1015
BstMAI GTCTC 2 cut(s) 596, 934
BstMBI GATC 6 cut(s) 67, 297, 447, 606, 980, 1012
BstMCI CGRYCG 1 cut(s) 609
BstMWI GCNNNNNNNGC 7 cut(s) 209, 220, 269, 360, 685, 761, 878
BstNI CCWGG 4 cut(s) 31, 260, 464, 672
BstPI GGTNACC 1 cut(s) 1148
BstSCI CCNGG 6 cut(s) 29, 192, 258, 462, 670, 1212
BstSFI CTRYAG 2 cut(s) 677, 889
BstSLI GKGCMC 2 cut(s) 417, 671
BstUI CGCG 3 cut(s) 321, 611, 632
BstV1I GCAGC 6 cut(s) 371, 573, 576, 771, 837, 1056
BstX2I RGATCY 2 cut(s) 297, 980
BstYI RGATCY 2 cut(s) 297, 980
Bsu15I ATCGAT 1 cut(s) 1198
BsuRI GGCC 7 cut(s) 5, 34, 263, 398, 415, 675, 780
BsuTUI ATCGAT 1 cut(s) 1198
BtgI CCRYGG 2 cut(s) 273, 286
BtgZI GCGATG 1 cut(s) 123
BtrI CACGTC 1 cut(s) 241
BtsCI GGATG 1 cut(s) 1189
BtsIMutI CAGTG 1 cut(s) 923
BtuMI TCGCGA 1 cut(s) 611
BveI ACCTGC 2 cut(s) 631, 679
Cac8I GCNNGC 9 cut(s) 221, 265, 323, 677, 757, 782, 789, 799, 1115
CciI TCATGA 2 cut(s) 444, 739
CfoI GCGC 2 cut(s) 214, 632
Cfr13I GGNCC 7 cut(s) 33, 413, 414, 507, 526, 720, 949
ClaI ATCGAT 1 cut(s) 1198
CpoI CGGWCCG 1 cut(s) 507
CseI GACGC 1 cut(s) 352
Csp6I GTAC 2 cut(s) 427, 565
CspI CGGWCCG 1 cut(s) 507
CviAII CATG 5 cut(s) 445, 733, 740, 953, 1180
CviQI GTAC 2 cut(s) 427, 565
DdeI CTNAG 3 cut(s) 423, 1087, 1104
DinI GGCGCC 1 cut(s) 213
DpnI GATC 6 cut(s) 69, 299, 449, 608, 982, 1014
DpnII GATC 6 cut(s) 67, 297, 447, 606, 980, 1012
DrdI GACNNNNNNGTC 1 cut(s) 533
DseDI GACNNNNNNGTC 1 cut(s) 533
EaeI YGGCCR 3 cut(s) 3, 396, 778
Eam1104I CTCTTC 3 cut(s) 239, 332, 910
EarI CTCTTC 3 cut(s) 239, 332, 910
EciI GGCGGA 4 cut(s) 4, 37, 320, 369
Ecl136II GAGCTC 2 cut(s) 325, 484
Eco130I CCWWGG 2 cut(s) 18, 618
Eco147I AGGCCT 1 cut(s) 263
Eco24I GRGCYC 3 cut(s) 327, 417, 486
Eco47I GGWCC 4 cut(s) 507, 526, 720, 949
Eco53kI GAGCTC 2 cut(s) 325, 484
Eco91I GGTNACC 1 cut(s) 1148
EcoICRI GAGCTC 2 cut(s) 325, 484
EcoNI CCTNNNNNAGG 1 cut(s) 680
EcoO65I GGTNACC 1 cut(s) 1148
EcoRII CCWGG 4 cut(s) 29, 258, 462, 670
EcoT14I CCWWGG 2 cut(s) 18, 618
EcoT38I GRGCYC 3 cut(s) 327, 417, 486
EgeI GGCGCC 1 cut(s) 213
EheI GGCGCC 1 cut(s) 213
ErhI CCWWGG 2 cut(s) 18, 618
Esp3I CGTCTC 1 cut(s) 596
FaeI CATG 5 cut(s) 448, 736, 743, 956, 1183
FaiI YATR 7 cut(s) 401, 446, 734, 741, 891, 954, 1181
FalI AAGNNNNNCTT 2 cut(s) 798, 830
FaqI GGGAC 4 cut(s) 292, 467, 539, 823
FatI CATG 5 cut(s) 444, 732, 739, 952, 1179
FauI CCCGC 2 cut(s) 224, 640
Fnu4HI GCNGC 9 cut(s) 51, 54, 385, 515, 587, 590, 785, 851, 1070
FokI GGATG 1 cut(s) 1196
FriOI GRGCYC 3 cut(s) 327, 417, 486
Fsp4HI GCNGC 9 cut(s) 51, 54, 385, 515, 587, 590, 785, 851, 1070
GlaI GCGC 2 cut(s) 213, 631
GluI GCNGC 9 cut(s) 51, 54, 385, 515, 587, 590, 785, 851, 1070
GsaI CCCAGC 1 cut(s) 1240
GsuI CTGGAG 1 cut(s) 88
HaeII RGCGCY 1 cut(s) 215
HaeIII GGCC 7 cut(s) 5, 34, 263, 398, 415, 675, 780
HapII CCGG 7 cut(s) 194, 209, 295, 505, 520, 773, 1214
HgaI GACGC 1 cut(s) 352
HhaI GCGC 2 cut(s) 214, 632
Hin1I GRCGYC 2 cut(s) 212, 363
Hin1II CATG 5 cut(s) 448, 736, 743, 956, 1183
Hin6I GCGC 2 cut(s) 212, 630
HinP1I GCGC 2 cut(s) 212, 630
HincII GTYRAC 1 cut(s) 100
HindII GTYRAC 1 cut(s) 100
HindIII AAGCTT 1 cut(s) 1189
HinfI GANTC 7 cut(s) 101, 197, 357, 531, 743, 811, 1171
HpaII CCGG 7 cut(s) 194, 209, 295, 505, 520, 773, 1214
HphI GGTGA 4 cut(s) 1142, 1180, 1228, 1238
Hpy166II GTNNAC 2 cut(s) 100, 565
Hpy188I TCNGA 6 cut(s) 67, 151, 822, 1012, 1061, 1090
Hpy188III TCNNGA 9 cut(s) 295, 370, 445, 520, 610, 740, 747, 836, 978
Hpy8I GTNNAC 2 cut(s) 100, 565
Hpy99I CGWCG 5 cut(s) 368, 371, 539, 542, 842
HpyAV CCTTC 3 cut(s) 67, 676, 1115
HpyCH4III ACNGT 2 cut(s) 949, 1165
HpyCH4IV ACGT 1 cut(s) 240
HpyCH4V TGCA 8 cut(s) 387, 474, 592, 679, 764, 853, 872, 1007
HpyF10VI GCNNNNNNNGC 7 cut(s) 209, 220, 269, 360, 685, 761, 878
HpyF3I CTNAG 3 cut(s) 423, 1087, 1104
HpySE526I ACGT 1 cut(s) 240
Hsp92I GRCGYC 2 cut(s) 212, 363
Hsp92II CATG 5 cut(s) 448, 736, 743, 956, 1183
HspAI GCGC 2 cut(s) 212, 630
KasI GGCGCC 1 cut(s) 211
Kpn2I TCCGGA 2 cut(s) 294, 519
Kzo9I GATC 6 cut(s) 67, 297, 447, 606, 980, 1012
LguI GCTCTTC 1 cut(s) 332
LmnI GCTCC 4 cut(s) 481, 500, 522, 700
Lsp1109I GCAGC 6 cut(s) 371, 573, 576, 771, 837, 1056
LweI GCATC 3 cut(s) 363, 483, 1016
MaeII ACGT 1 cut(s) 240
MaeIII GTNAC 4 cut(s) 228, 335, 935, 1148
MalI GATC 6 cut(s) 69, 299, 449, 608, 982, 1014
MbiI CCGCTC 2 cut(s) 219, 495
MboI GATC 6 cut(s) 67, 297, 447, 606, 980, 1012
MboII GAAGA 5 cut(s) 226, 319, 565, 897, 1280
MflI RGATCY 2 cut(s) 297, 980
MhlI GDGCHC 4 cut(s) 327, 417, 486, 671
MlsI TGGCCA 2 cut(s) 5, 398
MluCI AATT 2 cut(s) 568, 973
MluNI TGGCCA 2 cut(s) 5, 398
Mly113I GGCGCC 1 cut(s) 212
MlyI GAGTC 3 cut(s) 95, 206, 805
Mox20I TGGCCA 2 cut(s) 5, 398
MroI TCCGGA 2 cut(s) 294, 519
MroXI GAANNNNTTC 1 cut(s) 557
MscI TGGCCA 2 cut(s) 5, 398
MseI TTAA 3 cut(s) 249, 972, 1279
Msp20I TGGCCA 2 cut(s) 5, 398
MspA1I CMGCKG 2 cut(s) 784, 1240
MspI CCGG 7 cut(s) 194, 209, 295, 505, 520, 773, 1214
MspR9I CCNGG 6 cut(s) 31, 194, 260, 464, 672, 1214
Mva1269I GAATGC 1 cut(s) 899
MvaI CCWGG 4 cut(s) 31, 260, 464, 672
MvnI CGCG 3 cut(s) 321, 611, 632
MwoI GCNNNNNNNGC 7 cut(s) 209, 220, 269, 360, 685, 761, 878
NarI GGCGCC 1 cut(s) 212
NciI CCSGG 2 cut(s) 194, 1214
NdeII GATC 6 cut(s) 67, 297, 447, 606, 980, 1012
NlaIII CATG 5 cut(s) 448, 736, 743, 956, 1183
NlaIV GGNNCC 6 cut(s) 213, 293, 415, 518, 527, 982
NmuCI GTSAC 4 cut(s) 228, 335, 935, 1148
NruI TCGCGA 1 cut(s) 611
PagI TCATGA 2 cut(s) 444, 739
PaqCI CACCTGC 1 cut(s) 631
PceI AGGCCT 1 cut(s) 263
PciSI GCTCTTC 1 cut(s) 332
PcsI WCGNNNNNNNCGW 1 cut(s) 366
PctI GAATGC 1 cut(s) 899
PdmI GAANNNNTTC 1 cut(s) 557
PfeI GAWTC 4 cut(s) 357, 531, 743, 1171
PkrI GCNGC 9 cut(s) 52, 55, 386, 516, 588, 591, 786, 852, 1071
Ple19I CGATCG 1 cut(s) 609
PleI GAGTC 3 cut(s) 95, 205, 805
PluTI GGCGCC 1 cut(s) 215
PpsI GAGTC 3 cut(s) 95, 205, 805
Psp124BI GAGCTC 2 cut(s) 327, 486
Psp6I CCWGG 4 cut(s) 29, 258, 462, 670
PspEI GGTNACC 1 cut(s) 1148
PspFI CCCAGC 1 cut(s) 1236
PspGI CCWGG 4 cut(s) 29, 258, 462, 670
PspN4I GGNNCC 6 cut(s) 213, 293, 415, 518, 527, 982
PspOMI GGGCCC 1 cut(s) 413
PspPI GGNCC 7 cut(s) 33, 413, 414, 507, 526, 720, 949
PstI CTGCAG 1 cut(s) 681
PsuI RGATCY 2 cut(s) 297, 980
PvuI CGATCG 1 cut(s) 609
PvuII CAGCTG 2 cut(s) 784, 1240
RruI TCGCGA 1 cut(s) 611
RsaI GTAC 2 cut(s) 428, 566
RsaNI GTAC 2 cut(s) 427, 565
Rsr2I CGGWCCG 1 cut(s) 507
RsrII CGGWCCG 1 cut(s) 507
SacI GAGCTC 2 cut(s) 327, 486
SapI GCTCTTC 1 cut(s) 332
SaqAI TTAA 3 cut(s) 249, 972, 1279
SatI GCNGC 9 cut(s) 51, 54, 385, 515, 587, 590, 785, 851, 1070
Sau3AI GATC 6 cut(s) 67, 297, 447, 606, 980, 1012
Sau96I GGNCC 7 cut(s) 33, 413, 414, 507, 526, 720, 949
SchI GAGTC 3 cut(s) 95, 206, 805
ScrFI CCNGG 6 cut(s) 31, 194, 260, 464, 672, 1214
SduI GDGCHC 4 cut(s) 327, 417, 486, 671
SfaNI GCATC 3 cut(s) 363, 483, 1016
SfcI CTRYAG 2 cut(s) 677, 889
SfoI GGCGCC 1 cut(s) 213
SinI GGWCC 4 cut(s) 507, 526, 720, 949
SmlI CTYRAG 2 cut(s) 931, 965
SmoI CTYRAG 2 cut(s) 931, 965
Sse9I AATT 2 cut(s) 568, 973
SseBI AGGCCT 1 cut(s) 263
SspDI GGCGCC 1 cut(s) 211
SstI GAGCTC 2 cut(s) 327, 486
StuI AGGCCT 1 cut(s) 263
StyD4I CCNGG 6 cut(s) 29, 192, 258, 462, 670, 1212
StyI CCWWGG 2 cut(s) 18, 618
TaaI ACNGT 2 cut(s) 949, 1165
TaiI ACGT 1 cut(s) 243
TaqI TCGA 5 cut(s) 342, 369, 713, 837, 1198
TaqII GACCGA 1 cut(s) 543
TasI AATT 2 cut(s) 568, 973
TatI WGTACW 1 cut(s) 564
TauI GCSGC 3 cut(s) 53, 56, 517
TfiI GAWTC 4 cut(s) 357, 531, 743, 1171
Tru1I TTAA 3 cut(s) 249, 972, 1279
Tru9I TTAA 3 cut(s) 249, 972, 1279
TscAI CASTG 1 cut(s) 923
TseFI GTSAC 4 cut(s) 228, 335, 935, 1148
TseI GCWGC 6 cut(s) 384, 586, 589, 784, 850, 1069
Tsp45I GTSAC 4 cut(s) 228, 335, 935, 1148
TspDTI ATGAA 2 cut(s) 718, 1045
TspGWI ACGGA 4 cut(s) 216, 487, 499, 855
TspRI CASTG 1 cut(s) 923
VpaK11BI GGWCC 4 cut(s) 507, 526, 720, 949
XagI CCTNNNNNAGG 1 cut(s) 680
XcmI CCANNNNNNNNNTGG 1 cut(s) 730
XmnI GAANNNNTTC 1 cut(s) 557
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.