Rw6G030210

WD repeat domain phosphoinositide-interacting protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0001367
Physical Location & Seq
Forward (+)
54410439 .. 54413649
3211 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G030210.1

Sequence Viewer

Length: 1260 bp
ATGGCCACCCTCTCCGCCTTCTCACCGCCCTCCTGGCCGGACCCCAACTCCGCCACCTTCCTCTCCGAGACCACCGACGCCGACTCGATCGCAACCGCCGACGACCACGACCCCCAATCGCCTCCTCCAAACCCTGACCTCAACAACAGCACCACCTTCTCGCCGTCGCCGCCGGACCCAACCCCTGCGACGTCGCGCTCGCCTCCGTCGCTGTTCCACCTCTCGTTCAATCAGGACCAGGCCTGCTTCGCCGTGGGCACAGACCACGGCTTCCGGATCTACAACTGCGACCCGTTCCGCGAGCTCTTCCGCCGCGACTTCGACAACGGCGGCGGAATCGGCGTCGTGGAGATGCTTTTCCGCTGCAATATCCTGTCCATCGTCGGCGGTGGGCCCGACCCTCAGTACCCAACGAACAAGGTGATGATTTGGGACGATCACCAGGGCCGGTGCATCGGCGAGCTTTCGTTCCGCTCCGTCGTCCGGTCCGTGCGCCTCCGCAGGGACCGAATCGTCGTCGTTTTGGAGCAGAAGATTTTCGTGTACAATTTCGCCGACTTGAAATTGCTCCACCAGATTGAGACGATTGCGAACCCCAAGGGGCTCTGCGCGGTGTCGCAAGTGGCCGGGTCGCTGGTGCTGGTTTGCCCGGGGTTGCAGAAAGGGCAGGTTAGGGTTGAGCACTATGCTTCCAAGAGGACCAAATTCATCATGGCTCATGATTCTAGGCTCGCCTGCTTTGCTCTGACGCCGGACGGCCAGTTACTGGCCACCGCCAGCAGCAAGGGGACTCTCATTCGGATTTTCAATACACTTGATGGGAGTTTGCTTCAAGAGGTAAGGAGGGGAGCAGACAGAGCAGAAATCTATAGTCTGGCATTCTCTTCTACTGCTCAGTGGCTAGCAGTCTCGAGTGATAAGGGAACAGTCCATGTTTTCAATCTGAAGGTTAATGCTGGATCAAGTGGAAATGAGATGCGTACTTCCGCTGATTCTAATATAGTTACTTCATCATCAAACTCATCTCTTTCTTTCATCAGAGGTGTTTTGCCCAAATATTTTAACTCAGAGTGGTCTGTTGCTCAGTTTCGCTTGCTTGAGGGTTCTCAATACCTTGTTGCTTTTGGCCACCAGAAGAATACAGTGGTCATTCTTGGCATGGATGGAAGCTTCTATCGGTGCCAGTTTGACCCCGTGAATGGAGGAGAGATGACCCAGCTGGAATATCACAACTTTCTAAAGCCAGAAGAAGCCTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000045 GO:0000407 GO:0000422 GO:0001101 GO:0003674 GO:0005488 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006464 GO:0006497 GO:0006807 GO:0006914 GO:0006950 GO:0006952 GO:0006970 GO:0006979 GO:0006996 GO:0007005 GO:0007033 GO:0007275 GO:0007568 GO:0008104 GO:0008150 GO:0008152 GO:0008289 GO:0009056 GO:0009058 GO:0009059 GO:0009414 GO:0009415 GO:0009605 GO:0009607 GO:0009620 GO:0009628 GO:0009651 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0009991 GO:0010035 GO:0010150 GO:0010506 GO:0010508 GO:0016020 GO:0016043 GO:0016236 GO:0019222 GO:0019538 GO:0019898 GO:0022411 GO:0022607 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031667 GO:0032266 GO:0032501 GO:0032502 GO:0033036 GO:0034045 GO:0034497 GO:0034613 GO:0034645 GO:0035091 GO:0036211 GO:0042157 GO:0042158 GO:0042221 GO:0042594 GO:0043167 GO:0043168 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044260 GO:0044267 GO:0044424 GO:0044425 GO:0044444 GO:0044464 GO:0044804 GO:0048366 GO:0048367 GO:0048518 GO:0048522 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051179 GO:0051641 GO:0051704 GO:0051707 GO:0061726 GO:0061919 GO:0065007 GO:0070727 GO:0070925 GO:0071704 GO:0071840 GO:0080025 GO:0090693 GO:0098542 GO:0098805 GO:0099402 GO:1901564 GO:1901566 GO:1901576 GO:1901700 GO:1901981 GO:1902936 GO:1903008 GO:1905037
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
WD40

Protein Analysis

419

Amino Acids

46.09

Weight (kDa)

6.07

Isoelectric Point (pI)

43.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PROPPIN PF21032 73 - 412 2.9e-38 PROPPIN
Beta-prop_THOC3 PF25174 139 - 330 2.6e-13 THOC3 beta-propeller domain
WD40_CDC20-Fz PF24807 168 - 318 4.1e-07 CDC20/Fizzy WD40 domain
Beta-prop_WDR3_1st PF25173 177 - 318 3.1e-07 WDR3 first beta-propeller domain
Beta-prop_EML_2 PF23414 222 - 319 1.1e-07 Echinoderm microtubule-associated protein second beta-propeller
WD40_WDHD1_1st PF24817 231 - 335 1.5e-06 WDHD1 first WD40 domain
Beta-prop_WDR5 PF25175 239 - 318 5.5e-08 WDR5 beta-propeller domain
WD40_Prp19 PF24814 239 - 387 4.7e-09 Prp19 WD40 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 512
AatII GACGTC 1 cut(s) 194
Acc36I ACCTGC 1 cut(s) 658
AccB1I GGYRCC 1 cut(s) 1179
AccB7I CCANNNNNTGG 1 cut(s) 766
AccBSI CCGCTC 1 cut(s) 474
AccII CGCG 4 cut(s) 196, 300, 315, 611
AccIII TCCGGA 1 cut(s) 273
AclWI GGATC 2 cut(s) 284, 967
AcoI YGGCCR 6 cut(s) 3, 35, 624, 757, 768, 1126
AcsI RAATTY 1 cut(s) 704
AcuI CTGAAG 1 cut(s) 965
AcyI GRCGYC 4 cut(s) 78, 191, 342, 749
AfaI GTAC 3 cut(s) 407, 545, 982
AfiI CCNNNNNNNGG 4 cut(s) 483, 502, 766, 1199
AgsI TTSAA 5 cut(s) 229, 562, 808, 833, 940
AjnI CCWGG 3 cut(s) 32, 237, 441
AluBI AGCT 4 cut(s) 304, 463, 1170, 1219
AluI AGCT 4 cut(s) 304, 463, 1170, 1219
Alw21I GWGCWC 2 cut(s) 306, 684
Alw26I GTCTC 3 cut(s) 62, 575, 913
AlwI GGATC 2 cut(s) 284, 967
AlwNI CAGNNNCTG 1 cut(s) 766
Ama87I CYCGRG 2 cut(s) 649, 910
Aor13HI TCCGGA 1 cut(s) 273
AoxI GGCC 9 cut(s) 3, 35, 240, 392, 445, 624, 757, 768, 1126
ApaI GGGCCC 1 cut(s) 396
ApeKI GCWGC 2 cut(s) 363, 780
ApoI RAATTY 1 cut(s) 704
Asp700I GAANNNNTTC 1 cut(s) 536
AspLEI GCGC 3 cut(s) 198, 495, 611
AspS9I GGNCC 9 cut(s) 40, 175, 235, 392, 393, 445, 486, 505, 699
AsuC2I CCSGG 3 cut(s) 628, 650, 651
AsuHPI GGTGA 3 cut(s) 15, 431, 433
AsuNHI GCTAGC 1 cut(s) 901
AvaI CYCGRG 2 cut(s) 649, 910
AvaII GGWCC 6 cut(s) 40, 175, 235, 486, 505, 699
BaeGI GKGCMC 2 cut(s) 260, 396
BalI TGGCCA 3 cut(s) 5, 770, 1128
BanI GGYRCC 1 cut(s) 1179
BanII GRGCYC 3 cut(s) 306, 396, 606
Bbv12I GWGCWC 2 cut(s) 306, 684
BbvI GCAGC 2 cut(s) 350, 792
BccI CCATC 3 cut(s) 386, 812, 1157
BceAI ACGGC 5 cut(s) 148, 236, 283, 343, 772
BciT130I CCWGG 3 cut(s) 34, 239, 443
BcnI CCSGG 3 cut(s) 628, 650, 651
BcoDI GTCTC 3 cut(s) 62, 575, 913
BfaI CTAG 2 cut(s) 726, 902
BfmI CTRYAG 1 cut(s) 868
BfuAI ACCTGC 1 cut(s) 658
BglI GCCNNNNNGGC 1 cut(s) 34
BisI GCNGC 5 cut(s) 170, 313, 331, 364, 781
BlsI GCNGC 5 cut(s) 171, 314, 332, 365, 782
Bme1390I CCNGG 6 cut(s) 34, 239, 443, 628, 650, 651
Bme18I GGWCC 6 cut(s) 40, 175, 235, 486, 505, 699
BmeT110I CYCGRG 2 cut(s) 649, 910
BmgT120I GGNCC 9 cut(s) 40, 175, 235, 392, 393, 445, 486, 505, 699
BmiI GGNNCC 5 cut(s) 42, 177, 394, 506, 1181
BmrFI CCNGG 6 cut(s) 34, 239, 443, 628, 650, 651
BmsI GCATC 3 cut(s) 342, 462, 966
BmtI GCTAGC 1 cut(s) 905
BpuEI CTTGAG 1 cut(s) 1118
BpuMI CCSGG 3 cut(s) 628, 650, 651
BsaHI GRCGYC 4 cut(s) 78, 191, 342, 749
BsaI GGTCTC 1 cut(s) 62
BsaJI CCNNGG 6 cut(s) 252, 265, 442, 597, 649, 650
BsaWI WCCGGW 2 cut(s) 273, 483
BsaXI ACNNNNNCTCC 2 cut(s) 32, 62
Bsc4I CCNNNNNNNGG 4 cut(s) 483, 502, 766, 1199
Bse118I RCCGGY 1 cut(s) 447
Bse1I ACTGG 3 cut(s) 760, 771, 1183
BseAI TCCGGA 1 cut(s) 273
BseBI CCWGG 3 cut(s) 34, 239, 443
BseDI CCNNGG 6 cut(s) 252, 265, 442, 597, 649, 650
BseGI GGATG 1 cut(s) 1168
BseLI CCNNNNNNNGG 4 cut(s) 483, 502, 766, 1199
BseMII CTCAG 4 cut(s) 416, 908, 1080, 1097
BseNI ACTGG 3 cut(s) 760, 771, 1183
BseRI GAGGAG 2 cut(s) 114, 1218
BseSI GKGCMC 2 cut(s) 260, 396
BseXI GCAGC 2 cut(s) 350, 792
BseYI CCCAGC 1 cut(s) 1215
Bsh1236I CGCG 4 cut(s) 196, 300, 315, 611
Bsh1285I CGRYCG 1 cut(s) 90
BshFI GGCC 9 cut(s) 5, 37, 242, 394, 447, 626, 759, 770, 1128
BshNI GGYRCC 1 cut(s) 1179
BsiEI CGRYCG 1 cut(s) 90
BsiHKAI GWGCWC 2 cut(s) 306, 684
BsiHKCI CYCGRG 2 cut(s) 649, 910
BsiSI CCGG 8 cut(s) 38, 173, 274, 448, 484, 627, 650, 752
BslFI GGGAC 3 cut(s) 446, 518, 802
BslI CCNNNNNNNGG 4 cut(s) 483, 502, 766, 1199
BsmAI GTCTC 3 cut(s) 62, 575, 913
BsmBI CGTCTC 1 cut(s) 575
BsmFI GGGAC 3 cut(s) 446, 518, 802
BsmI GAATGC 1 cut(s) 878
BsnI GGCC 9 cut(s) 5, 37, 242, 394, 447, 626, 759, 770, 1128
Bso31I GGTCTC 1 cut(s) 62
BsoBI CYCGRG 2 cut(s) 649, 910
Bsp120I GGGCCC 1 cut(s) 392
Bsp1286I GDGCHC 5 cut(s) 260, 306, 396, 606, 684
Bsp13I TCCGGA 1 cut(s) 273
Bsp1407I TGTACA 1 cut(s) 543
Bsp143I GATC 4 cut(s) 87, 276, 436, 959
BspANI GGCC 9 cut(s) 5, 37, 242, 394, 447, 626, 759, 770, 1128
BspCNI CTCAG 4 cut(s) 415, 907, 1079, 1096
BspEI TCCGGA 1 cut(s) 273
BspFNI CGCG 4 cut(s) 196, 300, 315, 611
BspHI TCATGA 1 cut(s) 718
BspLI GGNNCC 5 cut(s) 42, 177, 394, 506, 1181
BspMI ACCTGC 1 cut(s) 658
BspOI GCTAGC 1 cut(s) 905
BspPI GGATC 2 cut(s) 284, 967
BspQI GCTCTTC 1 cut(s) 311
BspT107I GGYRCC 1 cut(s) 1179
BspTNI GGTCTC 1 cut(s) 62
BsrBI CCGCTC 1 cut(s) 474
BsrFI RCCGGY 1 cut(s) 447
BsrGI TGTACA 1 cut(s) 543
BsrI ACTGG 3 cut(s) 760, 771, 1183
BssAI RCCGGY 1 cut(s) 447
BssECI CCNNGG 6 cut(s) 252, 265, 442, 597, 649, 650
BssMI GATC 4 cut(s) 87, 276, 436, 959
BssNI GRCGYC 4 cut(s) 78, 191, 342, 749
BssT1I CCWWGG 1 cut(s) 597
Bst2UI CCWGG 3 cut(s) 34, 239, 443
Bst4CI ACNGT 2 cut(s) 928, 1144
Bst6I CTCTTC 2 cut(s) 311, 889
BstACI GRCGYC 4 cut(s) 78, 191, 342, 749
BstAUI TGTACA 1 cut(s) 543
BstC8I GCNNGC 9 cut(s) 200, 244, 302, 461, 732, 736, 778, 903, 1094
BstDEI CTNAG 4 cut(s) 402, 894, 1066, 1083
BstDSI CCRYGG 2 cut(s) 252, 265
BstF5I GGATG 1 cut(s) 1168
BstFNI CGCG 4 cut(s) 196, 300, 315, 611
BstHHI GCGC 3 cut(s) 198, 495, 611
BstKTI GATC 4 cut(s) 90, 279, 439, 962
BstMAI GTCTC 3 cut(s) 62, 575, 913
BstMBI GATC 4 cut(s) 87, 276, 436, 959
BstMCI CGRYCG 1 cut(s) 90
BstMWI GCNNNNNNNGC 8 cut(s) 34, 169, 208, 248, 339, 664, 740, 857
BstNI CCWGG 3 cut(s) 34, 239, 443
BstSCI CCNGG 6 cut(s) 32, 237, 441, 626, 648, 649
BstSFI CTRYAG 1 cut(s) 868
BstSLI GKGCMC 2 cut(s) 260, 396
BstUI CGCG 4 cut(s) 196, 300, 315, 611
BstV1I GCAGC 2 cut(s) 350, 792
BstX2I RGATCY 1 cut(s) 276
BstYI RGATCY 1 cut(s) 276
BsuRI GGCC 9 cut(s) 5, 37, 242, 394, 447, 626, 759, 770, 1128
BtgI CCRYGG 2 cut(s) 252, 265
BtsCI GGATG 1 cut(s) 1168
BtsIMutI CAGTG 2 cut(s) 902, 1149
BveI ACCTGC 1 cut(s) 658
Cac8I GCNNGC 9 cut(s) 200, 244, 302, 461, 732, 736, 778, 903, 1094
CaiI CAGNNNCTG 1 cut(s) 766
CciI TCATGA 1 cut(s) 718
CfoI GCGC 3 cut(s) 198, 495, 611
Cfr10I RCCGGY 1 cut(s) 447
Cfr13I GGNCC 9 cut(s) 40, 175, 235, 392, 393, 445, 486, 505, 699
Cfr9I CCCGGG 1 cut(s) 649
CpoI CGGWCCG 1 cut(s) 486
CseI GACGC 3 cut(s) 86, 331, 757
Csp6I GTAC 3 cut(s) 406, 544, 981
CspI CGGWCCG 1 cut(s) 486
CviAII CATG 4 cut(s) 712, 719, 932, 1159
CviQI GTAC 3 cut(s) 406, 544, 981
DdeI CTNAG 4 cut(s) 402, 894, 1066, 1083
DpnI GATC 4 cut(s) 89, 278, 438, 961
DpnII GATC 4 cut(s) 87, 276, 436, 959
DrdI GACNNNNNNGTC 1 cut(s) 512
DseDI GACNNNNNNGTC 1 cut(s) 512
EaeI YGGCCR 6 cut(s) 3, 35, 624, 757, 768, 1126
Eam1104I CTCTTC 2 cut(s) 311, 889
EarI CTCTTC 2 cut(s) 311, 889
EciI GGCGGA 4 cut(s) 4, 40, 299, 348
Ecl136II GAGCTC 1 cut(s) 304
Eco130I CCWWGG 1 cut(s) 597
Eco147I AGGCCT 1 cut(s) 242
Eco24I GRGCYC 3 cut(s) 306, 396, 606
Eco31I GGTCTC 1 cut(s) 62
Eco47I GGWCC 6 cut(s) 40, 175, 235, 486, 505, 699
Eco53kI GAGCTC 1 cut(s) 304
Eco57I CTGAAG 1 cut(s) 965
Eco88I CYCGRG 2 cut(s) 649, 910
EcoICRI GAGCTC 1 cut(s) 304
EcoRII CCWGG 3 cut(s) 32, 237, 441
EcoT14I CCWWGG 1 cut(s) 597
EcoT38I GRGCYC 3 cut(s) 306, 396, 606
ErhI CCWWGG 1 cut(s) 597
Esp3I CGTCTC 1 cut(s) 575
FaeI CATG 4 cut(s) 715, 722, 935, 1162
FaiI YATR 7 cut(s) 687, 713, 720, 870, 933, 1001, 1160
FaqI GGGAC 3 cut(s) 446, 518, 802
FatI CATG 4 cut(s) 711, 718, 931, 1158
Fnu4HI GCNGC 5 cut(s) 170, 313, 331, 364, 781
FokI GGATG 1 cut(s) 1175
FriOI GRGCYC 3 cut(s) 306, 396, 606
Fsp4HI GCNGC 5 cut(s) 170, 313, 331, 364, 781
FspBI CTAG 2 cut(s) 726, 902
GlaI GCGC 3 cut(s) 197, 494, 610
GluI GCNGC 5 cut(s) 170, 313, 331, 364, 781
GsaI CCCAGC 1 cut(s) 1219
HaeIII GGCC 9 cut(s) 5, 37, 242, 394, 447, 626, 759, 770, 1128
HapII CCGG 8 cut(s) 38, 173, 274, 448, 484, 627, 650, 752
HgaI GACGC 3 cut(s) 86, 331, 757
HhaI GCGC 3 cut(s) 198, 495, 611
Hin1I GRCGYC 4 cut(s) 78, 191, 342, 749
Hin1II CATG 4 cut(s) 715, 722, 935, 1162
Hin6I GCGC 3 cut(s) 196, 493, 609
HinP1I GCGC 3 cut(s) 196, 493, 609
HindIII AAGCTT 1 cut(s) 1168
HinfI GANTC 6 cut(s) 83, 336, 510, 722, 790, 992
HpaII CCGG 8 cut(s) 38, 173, 274, 448, 484, 627, 650, 752
HphI GGTGA 3 cut(s) 15, 431, 433
Hpy166II GTNNAC 1 cut(s) 544
Hpy188I TCNGA 7 cut(s) 67, 747, 801, 945, 1040, 1069, 1259
Hpy188III TCNNGA 5 cut(s) 233, 274, 719, 833, 910
Hpy8I GTNNAC 1 cut(s) 544
HpyAV CCTTC 4 cut(s) 28, 67, 166, 940
HpyCH4III ACNGT 2 cut(s) 928, 1144
HpyCH4IV ACGT 1 cut(s) 191
HpyCH4V TGCA 3 cut(s) 366, 453, 658
HpyF10VI GCNNNNNNNGC 8 cut(s) 34, 169, 208, 248, 339, 664, 740, 857
HpyF3I CTNAG 4 cut(s) 402, 894, 1066, 1083
HpySE526I ACGT 1 cut(s) 191
Hsp92I GRCGYC 4 cut(s) 78, 191, 342, 749
Hsp92II CATG 4 cut(s) 715, 722, 935, 1162
HspAI GCGC 3 cut(s) 196, 493, 609
Kpn2I TCCGGA 1 cut(s) 273
Kzo9I GATC 4 cut(s) 87, 276, 436, 959
LguI GCTCTTC 1 cut(s) 311
LmnI GCTCC 4 cut(s) 479, 526, 573, 848
Lsp1109I GCAGC 2 cut(s) 350, 792
LweI GCATC 3 cut(s) 342, 462, 966
MaeI CTAG 2 cut(s) 726, 902
MaeII ACGT 1 cut(s) 191
MaeIII GTNAC 2 cut(s) 762, 1003
MalI GATC 4 cut(s) 89, 278, 438, 961
MbiI CCGCTC 1 cut(s) 474
MboI GATC 4 cut(s) 87, 276, 436, 959
MboII GAAGA 5 cut(s) 298, 544, 876, 1147, 1259
MflI RGATCY 1 cut(s) 276
MhlI GDGCHC 5 cut(s) 260, 306, 396, 606, 684
MlsI TGGCCA 3 cut(s) 5, 770, 1128
MluCI AATT 3 cut(s) 547, 563, 704
MluNI TGGCCA 3 cut(s) 5, 770, 1128
MlyI GAGTC 2 cut(s) 77, 784
Mox20I TGGCCA 3 cut(s) 5, 770, 1128
MroI TCCGGA 1 cut(s) 273
MroXI GAANNNNTTC 1 cut(s) 536
MscI TGGCCA 3 cut(s) 5, 770, 1128
MseI TTAA 2 cut(s) 951, 1062
Msp20I TGGCCA 3 cut(s) 5, 770, 1128
MspA1I CMGCKG 3 cut(s) 363, 989, 1219
MspI CCGG 8 cut(s) 38, 173, 274, 448, 484, 627, 650, 752
MspR9I CCNGG 6 cut(s) 34, 239, 443, 628, 650, 651
Mva1269I GAATGC 1 cut(s) 878
MvaI CCWGG 3 cut(s) 34, 239, 443
MvnI CGCG 4 cut(s) 196, 300, 315, 611
MwoI GCNNNNNNNGC 8 cut(s) 34, 169, 208, 248, 339, 664, 740, 857
NciI CCSGG 3 cut(s) 628, 650, 651
NdeII GATC 4 cut(s) 87, 276, 436, 959
NheI GCTAGC 1 cut(s) 901
NlaIII CATG 4 cut(s) 715, 722, 935, 1162
NlaIV GGNNCC 5 cut(s) 42, 177, 394, 506, 1181
PaeR7I CTCGAG 1 cut(s) 910
PagI TCATGA 1 cut(s) 718
PceI AGGCCT 1 cut(s) 242
PciSI GCTCTTC 1 cut(s) 311
PcsI WCGNNNNNNNCGW 2 cut(s) 96, 486
PctI GAATGC 1 cut(s) 878
PdmI GAANNNNTTC 1 cut(s) 536
PfeI GAWTC 4 cut(s) 336, 510, 722, 992
PflMI CCANNNNNTGG 1 cut(s) 766
PkrI GCNGC 5 cut(s) 171, 314, 332, 365, 782
Ple19I CGATCG 1 cut(s) 90
PleI GAGTC 2 cut(s) 77, 784
PpsI GAGTC 2 cut(s) 77, 784
Psp124BI GAGCTC 1 cut(s) 306
Psp6I CCWGG 3 cut(s) 32, 237, 441
PspFI CCCAGC 1 cut(s) 1215
PspGI CCWGG 3 cut(s) 32, 237, 441
PspN4I GGNNCC 5 cut(s) 42, 177, 394, 506, 1181
PspOMI GGGCCC 1 cut(s) 392
PspPI GGNCC 9 cut(s) 40, 175, 235, 392, 393, 445, 486, 505, 699
PstNI CAGNNNCTG 1 cut(s) 766
PsuI RGATCY 1 cut(s) 276
PvuI CGATCG 1 cut(s) 90
PvuII CAGCTG 1 cut(s) 1219
RsaI GTAC 3 cut(s) 407, 545, 982
RsaNI GTAC 3 cut(s) 406, 544, 981
Rsr2I CGGWCCG 1 cut(s) 486
RsrII CGGWCCG 1 cut(s) 486
SacI GAGCTC 1 cut(s) 306
SapI GCTCTTC 1 cut(s) 311
SaqAI TTAA 2 cut(s) 951, 1062
SatI GCNGC 5 cut(s) 170, 313, 331, 364, 781
Sau3AI GATC 4 cut(s) 87, 276, 436, 959
Sau96I GGNCC 9 cut(s) 40, 175, 235, 392, 393, 445, 486, 505, 699
SchI GAGTC 2 cut(s) 77, 784
ScrFI CCNGG 6 cut(s) 34, 239, 443, 628, 650, 651
SduI GDGCHC 5 cut(s) 260, 306, 396, 606, 684
SfaNI GCATC 3 cut(s) 342, 462, 966
SfcI CTRYAG 1 cut(s) 868
Sfr274I CTCGAG 1 cut(s) 910
SinI GGWCC 6 cut(s) 40, 175, 235, 486, 505, 699
SlaI CTCGAG 1 cut(s) 910
SmaI CCCGGG 1 cut(s) 651
SmlI CTYRAG 2 cut(s) 910, 1097
SmoI CTYRAG 2 cut(s) 910, 1097
Sse9I AATT 3 cut(s) 547, 563, 704
SseBI AGGCCT 1 cut(s) 242
SspI AATATT 1 cut(s) 1058
SspMI CTAG 2 cut(s) 726, 902
SstI GAGCTC 1 cut(s) 306
StuI AGGCCT 1 cut(s) 242
StyD4I CCNGG 6 cut(s) 32, 237, 441, 626, 648, 649
StyI CCWWGG 1 cut(s) 597
TaaI ACNGT 2 cut(s) 928, 1144
TaiI ACGT 1 cut(s) 194
TaqI TCGA 3 cut(s) 86, 321, 911
TaqII GACCGA 1 cut(s) 522
TasI AATT 3 cut(s) 547, 563, 704
TatI WGTACW 1 cut(s) 543
TauI GCSGC 3 cut(s) 172, 315, 333
TfiI GAWTC 4 cut(s) 336, 510, 722, 992
Tru1I TTAA 2 cut(s) 951, 1062
Tru9I TTAA 2 cut(s) 951, 1062
TscAI CASTG 2 cut(s) 902, 1149
TseI GCWGC 2 cut(s) 363, 780
TspDTI ATGAA 3 cut(s) 697, 999, 1024
TspGWI ACGGA 3 cut(s) 195, 466, 478
TspMI CCCGGG 1 cut(s) 649
TspRI CASTG 2 cut(s) 902, 1149
Van91I CCANNNNNTGG 1 cut(s) 766
VpaK11BI GGWCC 6 cut(s) 40, 175, 235, 486, 505, 699
XapI RAATTY 1 cut(s) 704
XcmI CCANNNNNNNNNTGG 1 cut(s) 709
XhoI CTCGAG 1 cut(s) 910
XmaI CCCGGG 1 cut(s) 649
XmnI GAANNNNTTC 1 cut(s) 536
XspI CTAG 2 cut(s) 726, 902
ZraI GACGTC 1 cut(s) 192
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.