Rroxscaffold_7G00174280

WD repeat domain phosphoinositide-interacting protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0001367
Physical Location & Seq
Reverse (-)
13984143 .. 13987145
3003 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00174280.1

Sequence Viewer

Length: 1266 bp
ATGGCCACCCTCTCCGCCTTCTCACCGCCCTCCTGGCCGGACCCCAACACCGCCACCTTCCTCTCCGAGACCACCGACGTCGACTCCATGGCCACCGCCGACGACCACGATCCCCAATCGCCTCCTCCAAACCCTGACCTCAACAACAAAATCAACACCACCTTCTCGCCGTCGCCGCCGGACCCAACCCCTGCGACGTCGCGCTCGCCTCCGTCGCTGTTCCACCTCTCGTTCAATCAGGACCAGGCCTGCTTCGCCGTGGGCACCGACCACGGCTTCCGGATCTACAACTGCGACCCGTTCCGCGAGCTCTTCCGCCGCGACTTCGACAACGGCGGCGGAATCGGCGTCGTGGAAATGCTCTTCCGCTGCAATATCCTGTCCATCGTCGGCGGTGGGCCCGACCCTCAGTACCCTACCAACAAGGTCATGATTTGGGACGATCACCAAGGCCGGTGCATTGGCGAGCTTTCGTTCCGCTCCGTCGTCCGGTCCGTGCGCCTCCGCAGGGACCGAATCGTGGTCGTTTTGGAGCAGAAGATTTTCGTGTACAATTTCGCCGACTTGAAATTGCTTCACCAGATTGAGACGATTGCGAACCCCAAGGGGCTCTGCGCGGTGTCGCAAGTGGCCGGGTCGCTGGTGCTGGTTTGCCCGGGGTTGCAGAAAGGGCAGGTTAGGGTTGAGCACTATGCTTCCAAGAGGACCAAATTCATCATGGCTCATGATTCCAGGCTCGCCTGCTTTGCTCTGACGCCGGACGGCCAGTTACTGGCCACCGCCAGCAGCAAGGGGACCCTCATTCGGATTTTCAATACACTTGATGGGAGTTTGCTTCAAGAGGTAAGGAGGGGAGCAGACAGAGCAGAAATCTATAGTCTGGCATTCTCTTCTACTGCCCAGTGGCTAGCAGTCTCGAGTGATAAGGGAACAGTCCATGTTTTCAATCTGAAGGTTAATTCCGGATCAAGTGGAAATGAGATGCGTACTTCCTCTGATTCTAATATAGTTACTTCATCATCAAACTCATCTCTTTCTTTCATCAGAGGTGTTTTGCCCAAATATTTTAACTCAGAGTGGTCTGTTGCTCAGTTTCGCTTGCTTGAGGGTTCTCAATACCTTGTTGCTTTTGGCCACCAGAAGAATACAGTGGTCATTCTTGGCATGGATGGAAGCTTCTATCGGTGCCAGTTTGACCCGGTGAATGGAGGAGAGATGACCCAGCTGGAATATCACAACTTTCTAAAGCCAGAAGAAGCCTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000045 GO:0000407 GO:0000422 GO:0001101 GO:0003674 GO:0005488 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006464 GO:0006497 GO:0006807 GO:0006914 GO:0006950 GO:0006952 GO:0006970 GO:0006979 GO:0006996 GO:0007005 GO:0007033 GO:0007275 GO:0007568 GO:0008104 GO:0008150 GO:0008152 GO:0008289 GO:0009056 GO:0009058 GO:0009059 GO:0009414 GO:0009415 GO:0009605 GO:0009607 GO:0009620 GO:0009628 GO:0009651 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0009991 GO:0010035 GO:0010150 GO:0010506 GO:0010508 GO:0016020 GO:0016043 GO:0016236 GO:0019222 GO:0019538 GO:0019898 GO:0022411 GO:0022607 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031667 GO:0032266 GO:0032501 GO:0032502 GO:0033036 GO:0034045 GO:0034497 GO:0034613 GO:0034645 GO:0035091 GO:0036211 GO:0042157 GO:0042158 GO:0042221 GO:0042594 GO:0043167 GO:0043168 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044260 GO:0044267 GO:0044424 GO:0044425 GO:0044444 GO:0044464 GO:0044804 GO:0048366 GO:0048367 GO:0048518 GO:0048522 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051179 GO:0051641 GO:0051704 GO:0051707 GO:0061726 GO:0061919 GO:0065007 GO:0070727 GO:0070925 GO:0071704 GO:0071840 GO:0080025 GO:0090693 GO:0098542 GO:0098805 GO:0099402 GO:1901564 GO:1901566 GO:1901576 GO:1901700 GO:1901981 GO:1902936 GO:1903008 GO:1905037
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
WD40

Protein Analysis

421

Amino Acids

46.45

Weight (kDa)

6.21

Isoelectric Point (pI)

44.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PROPPIN PF21032 75 - 414 2.1e-38 PROPPIN
Beta-prop_THOC3 PF25174 141 - 336 1.6e-13 THOC3 beta-propeller domain
WD40_CDC20-Fz PF24807 170 - 321 3.3e-07 CDC20/Fizzy WD40 domain
Beta-prop_WDR3_1st PF25173 179 - 320 2.8e-07 WDR3 first beta-propeller domain
Beta-prop_EML_2 PF23414 224 - 325 6.6e-08 Echinoderm microtubule-associated protein second beta-propeller
WD40_WDHD1_1st PF24817 233 - 340 6.3e-07 WDHD1 first WD40 domain
Beta-prop_WDR5 PF25175 241 - 320 4.5e-08 WDR5 beta-propeller domain
WD40_Prp19 PF24814 241 - 390 3.2e-09 Prp19 WD40 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 81, 200
Acc36I ACCTGC 1 cut(s) 664
AccB1I GGYRCC 2 cut(s) 263, 1185
AccB7I CCANNNNNTGG 1 cut(s) 772
AccBSI CCGCTC 1 cut(s) 480
AccI GTMKAC 1 cut(s) 81
AccII CGCG 4 cut(s) 202, 306, 321, 617
AccIII TCCGGA 2 cut(s) 279, 962
AclWI GGATC 3 cut(s) 104, 290, 973
AcoI YGGCCR 7 cut(s) 3, 35, 90, 630, 763, 774, 1132
AcsI RAATTY 1 cut(s) 710
AcuI CTGAAG 1 cut(s) 971
AcyI GRCGYC 4 cut(s) 78, 197, 348, 755
AfaI GTAC 3 cut(s) 413, 551, 988
AfiI CCNNNNNNNGG 6 cut(s) 489, 508, 520, 772, 804, 1205
AgsI TTSAA 5 cut(s) 235, 568, 814, 839, 946
AjnI CCWGG 3 cut(s) 32, 243, 731
AluBI AGCT 4 cut(s) 310, 469, 1176, 1225
AluI AGCT 4 cut(s) 310, 469, 1176, 1225
Alw21I GWGCWC 2 cut(s) 312, 690
Alw26I GTCTC 3 cut(s) 62, 581, 919
AlwI GGATC 3 cut(s) 104, 290, 973
AlwNI CAGNNNCTG 1 cut(s) 772
Ama87I CYCGRG 2 cut(s) 655, 916
Aor13HI TCCGGA 2 cut(s) 279, 962
ApaI GGGCCC 1 cut(s) 402
ApeKI GCWGC 2 cut(s) 369, 786
ApoI RAATTY 1 cut(s) 710
Asp700I GAANNNNTTC 1 cut(s) 542
AspLEI GCGC 3 cut(s) 204, 501, 617
AspS9I GGNCC 9 cut(s) 40, 181, 241, 398, 399, 492, 511, 705, 795
AsuC2I CCSGG 4 cut(s) 634, 656, 657, 1199
AsuHPI GGTGA 4 cut(s) 15, 437, 569, 1213
AsuNHI GCTAGC 1 cut(s) 907
AvaI CYCGRG 2 cut(s) 655, 916
AvaII GGWCC 7 cut(s) 40, 181, 241, 492, 511, 705, 795
BaeGI GKGCMC 2 cut(s) 266, 402
BalI TGGCCA 4 cut(s) 5, 92, 776, 1134
BanI GGYRCC 2 cut(s) 263, 1185
BanII GRGCYC 3 cut(s) 312, 402, 612
Bbv12I GWGCWC 2 cut(s) 312, 690
BbvI GCAGC 2 cut(s) 356, 798
BccI CCATC 3 cut(s) 392, 818, 1163
BceAI ACGGC 5 cut(s) 154, 242, 289, 349, 778
BciT130I CCWGG 3 cut(s) 34, 245, 733
BcnI CCSGG 4 cut(s) 634, 656, 657, 1199
BcoDI GTCTC 3 cut(s) 62, 581, 919
BfaI CTAG 1 cut(s) 908
BfmI CTRYAG 1 cut(s) 874
BfuAI ACCTGC 1 cut(s) 664
BglI GCCNNNNNGGC 1 cut(s) 34
BisI GCNGC 5 cut(s) 176, 319, 337, 370, 787
BlsI GCNGC 5 cut(s) 177, 320, 338, 371, 788
Bme1390I CCNGG 7 cut(s) 34, 245, 634, 656, 657, 733, 1199
Bme18I GGWCC 7 cut(s) 40, 181, 241, 492, 511, 705, 795
BmeT110I CYCGRG 2 cut(s) 655, 916
BmgT120I GGNCC 9 cut(s) 40, 181, 241, 398, 399, 492, 511, 705, 795
BmiI GGNNCC 8 cut(s) 42, 183, 265, 400, 512, 796, 797, 1187
BmrFI CCNGG 7 cut(s) 34, 245, 634, 656, 657, 733, 1199
BmrI ACTGGG 1 cut(s) 895
BmsI GCATC 1 cut(s) 972
BmtI GCTAGC 1 cut(s) 911
BmuI ACTGGG 1 cut(s) 895
BpuEI CTTGAG 1 cut(s) 1124
BpuMI CCSGG 4 cut(s) 634, 656, 657, 1199
BsaHI GRCGYC 4 cut(s) 78, 197, 348, 755
BsaI GGTCTC 1 cut(s) 62
BsaJI CCNNGG 7 cut(s) 87, 258, 271, 448, 603, 655, 656
BsaWI WCCGGW 3 cut(s) 279, 489, 962
BsaXI ACNNNNNCTCC 2 cut(s) 68, 98
Bsc4I CCNNNNNNNGG 6 cut(s) 489, 508, 520, 772, 804, 1205
Bse118I RCCGGY 1 cut(s) 453
Bse1I ACTGG 4 cut(s) 766, 777, 901, 1189
BseAI TCCGGA 2 cut(s) 279, 962
BseBI CCWGG 3 cut(s) 34, 245, 733
BseDI CCNNGG 7 cut(s) 87, 258, 271, 448, 603, 655, 656
BseGI GGATG 1 cut(s) 1174
BseLI CCNNNNNNNGG 6 cut(s) 489, 508, 520, 772, 804, 1205
BseMII CTCAG 3 cut(s) 422, 1086, 1103
BseNI ACTGG 4 cut(s) 766, 777, 901, 1189
BseRI GAGGAG 2 cut(s) 114, 1224
BseSI GKGCMC 2 cut(s) 266, 402
BseXI GCAGC 2 cut(s) 356, 798
BseYI CCCAGC 1 cut(s) 1221
Bsh1236I CGCG 4 cut(s) 202, 306, 321, 617
BshNI GGYRCC 2 cut(s) 263, 1185
BsiHKAI GWGCWC 2 cut(s) 312, 690
BsiHKCI CYCGRG 2 cut(s) 655, 916
BslFI GGGAC 3 cut(s) 452, 524, 808
BslI CCNNNNNNNGG 6 cut(s) 489, 508, 520, 772, 804, 1205
BsmAI GTCTC 3 cut(s) 62, 581, 919
BsmBI CGTCTC 1 cut(s) 581
BsmFI GGGAC 3 cut(s) 452, 524, 808
BsmI GAATGC 1 cut(s) 884
Bso31I GGTCTC 1 cut(s) 62
BsoBI CYCGRG 2 cut(s) 655, 916
Bsp120I GGGCCC 1 cut(s) 398
Bsp1286I GDGCHC 5 cut(s) 266, 312, 402, 612, 690
Bsp13I TCCGGA 2 cut(s) 279, 962
Bsp1407I TGTACA 1 cut(s) 549
Bsp143I GATC 4 cut(s) 109, 282, 442, 965
Bsp19I CCATGG 1 cut(s) 87
BspCNI CTCAG 3 cut(s) 421, 1085, 1102
BspEI TCCGGA 2 cut(s) 279, 962
BspFNI CGCG 4 cut(s) 202, 306, 321, 617
BspHI TCATGA 2 cut(s) 429, 724
BspLI GGNNCC 8 cut(s) 42, 183, 265, 400, 512, 796, 797, 1187
BspMI ACCTGC 1 cut(s) 664
BspOI GCTAGC 1 cut(s) 911
BspPI GGATC 3 cut(s) 104, 290, 973
BspQI GCTCTTC 2 cut(s) 317, 368
BspT107I GGYRCC 2 cut(s) 263, 1185
BspTNI GGTCTC 1 cut(s) 62
BsrBI CCGCTC 1 cut(s) 480
BsrFI RCCGGY 1 cut(s) 453
BsrGI TGTACA 1 cut(s) 549
BsrI ACTGG 4 cut(s) 766, 777, 901, 1189
BssAI RCCGGY 1 cut(s) 453
BssECI CCNNGG 7 cut(s) 87, 258, 271, 448, 603, 655, 656
BssMI GATC 4 cut(s) 109, 282, 442, 965
BssNI GRCGYC 4 cut(s) 78, 197, 348, 755
BssT1I CCWWGG 3 cut(s) 87, 448, 603
Bst2UI CCWGG 3 cut(s) 34, 245, 733
Bst4CI ACNGT 2 cut(s) 934, 1150
Bst6I CTCTTC 3 cut(s) 317, 368, 895
BstACI GRCGYC 4 cut(s) 78, 197, 348, 755
BstAUI TGTACA 1 cut(s) 549
BstC8I GCNNGC 9 cut(s) 206, 250, 308, 467, 738, 742, 784, 909, 1100
BstDEI CTNAG 3 cut(s) 408, 1072, 1089
BstDSI CCRYGG 3 cut(s) 87, 258, 271
BstF5I GGATG 1 cut(s) 1174
BstFNI CGCG 4 cut(s) 202, 306, 321, 617
BstHHI GCGC 3 cut(s) 204, 501, 617
BstKTI GATC 4 cut(s) 112, 285, 445, 968
BstMAI GTCTC 3 cut(s) 62, 581, 919
BstMBI GATC 4 cut(s) 109, 282, 442, 965
BstMWI GCNNNNNNNGC 8 cut(s) 34, 175, 214, 254, 345, 670, 746, 863
BstNI CCWGG 3 cut(s) 34, 245, 733
BstSCI CCNGG 7 cut(s) 32, 243, 632, 654, 655, 731, 1197
BstSFI CTRYAG 1 cut(s) 874
BstSLI GKGCMC 2 cut(s) 266, 402
BstUI CGCG 4 cut(s) 202, 306, 321, 617
BstV1I GCAGC 2 cut(s) 356, 798
BstX2I RGATCY 1 cut(s) 282
BstYI RGATCY 1 cut(s) 282
BtgI CCRYGG 3 cut(s) 87, 258, 271
BtsCI GGATG 1 cut(s) 1174
BtsIMutI CAGTG 2 cut(s) 908, 1155
BveI ACCTGC 1 cut(s) 664
Cac8I GCNNGC 9 cut(s) 206, 250, 308, 467, 738, 742, 784, 909, 1100
CaiI CAGNNNCTG 1 cut(s) 772
CciI TCATGA 2 cut(s) 429, 724
CfoI GCGC 3 cut(s) 204, 501, 617
Cfr10I RCCGGY 1 cut(s) 453
Cfr13I GGNCC 9 cut(s) 40, 181, 241, 398, 399, 492, 511, 705, 795
Cfr9I CCCGGG 1 cut(s) 655
CpoI CGGWCCG 1 cut(s) 492
CseI GACGC 2 cut(s) 337, 763
Csp6I GTAC 3 cut(s) 412, 550, 987
CspI CGGWCCG 1 cut(s) 492
CviAII CATG 6 cut(s) 88, 430, 718, 725, 938, 1165
CviQI GTAC 3 cut(s) 412, 550, 987
DdeI CTNAG 3 cut(s) 408, 1072, 1089
DpnI GATC 4 cut(s) 111, 284, 444, 967
DpnII GATC 4 cut(s) 109, 282, 442, 965
EaeI YGGCCR 7 cut(s) 3, 35, 90, 630, 763, 774, 1132
Eam1104I CTCTTC 3 cut(s) 317, 368, 895
EarI CTCTTC 3 cut(s) 317, 368, 895
EciI GGCGGA 3 cut(s) 4, 305, 354
Ecl136II GAGCTC 1 cut(s) 310
Eco130I CCWWGG 3 cut(s) 87, 448, 603
Eco147I AGGCCT 1 cut(s) 248
Eco24I GRGCYC 3 cut(s) 312, 402, 612
Eco31I GGTCTC 1 cut(s) 62
Eco47I GGWCC 7 cut(s) 40, 181, 241, 492, 511, 705, 795
Eco53kI GAGCTC 1 cut(s) 310
Eco57I CTGAAG 1 cut(s) 971
Eco88I CYCGRG 2 cut(s) 655, 916
EcoICRI GAGCTC 1 cut(s) 310
EcoO109I RGGNCCY 1 cut(s) 795
EcoRII CCWGG 3 cut(s) 32, 243, 731
EcoT14I CCWWGG 3 cut(s) 87, 448, 603
EcoT38I GRGCYC 3 cut(s) 312, 402, 612
ErhI CCWWGG 3 cut(s) 87, 448, 603
Esp3I CGTCTC 1 cut(s) 581
FaeI CATG 6 cut(s) 91, 433, 721, 728, 941, 1168
FaiI YATR 9 cut(s) 89, 431, 693, 719, 726, 876, 939, 1007, 1166
FaqI GGGAC 3 cut(s) 452, 524, 808
FatI CATG 6 cut(s) 87, 429, 717, 724, 937, 1164
FblI GTMKAC 1 cut(s) 81
Fnu4HI GCNGC 5 cut(s) 176, 319, 337, 370, 787
FokI GGATG 1 cut(s) 1181
FriOI GRGCYC 3 cut(s) 312, 402, 612
Fsp4HI GCNGC 5 cut(s) 176, 319, 337, 370, 787
FspBI CTAG 1 cut(s) 908
GlaI GCGC 3 cut(s) 203, 500, 616
GluI GCNGC 5 cut(s) 176, 319, 337, 370, 787
GsaI CCCAGC 1 cut(s) 1225
HgaI GACGC 2 cut(s) 337, 763
HhaI GCGC 3 cut(s) 204, 501, 617
Hin1I GRCGYC 4 cut(s) 78, 197, 348, 755
Hin1II CATG 6 cut(s) 91, 433, 721, 728, 941, 1168
Hin6I GCGC 3 cut(s) 202, 499, 615
HinP1I GCGC 3 cut(s) 202, 499, 615
HincII GTYRAC 1 cut(s) 82
HindII GTYRAC 1 cut(s) 82
HindIII AAGCTT 1 cut(s) 1174
HinfI GANTC 5 cut(s) 83, 342, 516, 728, 998
HphI GGTGA 4 cut(s) 15, 437, 569, 1213
Hpy166II GTNNAC 2 cut(s) 82, 550
Hpy188I TCNGA 8 cut(s) 67, 753, 807, 951, 997, 1046, 1075, 1265
Hpy188III TCNNGA 7 cut(s) 239, 280, 430, 725, 839, 916, 963
Hpy8I GTNNAC 2 cut(s) 82, 550
HpyAV CCTTC 4 cut(s) 28, 67, 172, 946
HpyCH4III ACNGT 2 cut(s) 934, 1150
HpyCH4IV ACGT 2 cut(s) 78, 197
HpyCH4V TGCA 3 cut(s) 372, 459, 664
HpyF10VI GCNNNNNNNGC 8 cut(s) 34, 175, 214, 254, 345, 670, 746, 863
HpyF3I CTNAG 3 cut(s) 408, 1072, 1089
HpySE526I ACGT 2 cut(s) 78, 197
Hsp92I GRCGYC 4 cut(s) 78, 197, 348, 755
Hsp92II CATG 6 cut(s) 91, 433, 721, 728, 941, 1168
HspAI GCGC 3 cut(s) 202, 499, 615
KflI GGGWCCC 1 cut(s) 795
Kpn2I TCCGGA 2 cut(s) 279, 962
Kzo9I GATC 4 cut(s) 109, 282, 442, 965
LguI GCTCTTC 2 cut(s) 317, 368
LmnI GCTCC 3 cut(s) 485, 532, 854
Lsp1109I GCAGC 2 cut(s) 356, 798
LweI GCATC 1 cut(s) 972
MaeI CTAG 1 cut(s) 908
MaeII ACGT 2 cut(s) 78, 197
MaeIII GTNAC 2 cut(s) 768, 1009
MalI GATC 4 cut(s) 111, 284, 444, 967
MbiI CCGCTC 1 cut(s) 480
MboI GATC 4 cut(s) 109, 282, 442, 965
MboII GAAGA 6 cut(s) 304, 355, 550, 882, 1153, 1265
MflI RGATCY 1 cut(s) 282
MhlI GDGCHC 5 cut(s) 266, 312, 402, 612, 690
MlsI TGGCCA 4 cut(s) 5, 92, 776, 1134
MluCI AATT 4 cut(s) 553, 569, 710, 958
MluNI TGGCCA 4 cut(s) 5, 92, 776, 1134
MlyI GAGTC 1 cut(s) 77
Mox20I TGGCCA 4 cut(s) 5, 92, 776, 1134
MroI TCCGGA 2 cut(s) 279, 962
MroXI GAANNNNTTC 1 cut(s) 542
MscI TGGCCA 4 cut(s) 5, 92, 776, 1134
MseI TTAA 2 cut(s) 957, 1068
Msp20I TGGCCA 4 cut(s) 5, 92, 776, 1134
MspA1I CMGCKG 2 cut(s) 369, 1225
MspR9I CCNGG 7 cut(s) 34, 245, 634, 656, 657, 733, 1199
Mva1269I GAATGC 1 cut(s) 884
MvaI CCWGG 3 cut(s) 34, 245, 733
MvnI CGCG 4 cut(s) 202, 306, 321, 617
MwoI GCNNNNNNNGC 8 cut(s) 34, 175, 214, 254, 345, 670, 746, 863
NciI CCSGG 4 cut(s) 634, 656, 657, 1199
NcoI CCATGG 1 cut(s) 87
NdeII GATC 4 cut(s) 109, 282, 442, 965
NheI GCTAGC 1 cut(s) 907
NlaIII CATG 6 cut(s) 91, 433, 721, 728, 941, 1168
NlaIV GGNNCC 8 cut(s) 42, 183, 265, 400, 512, 796, 797, 1187
PaeR7I CTCGAG 1 cut(s) 916
PagI TCATGA 2 cut(s) 429, 724
PceI AGGCCT 1 cut(s) 248
PciSI GCTCTTC 2 cut(s) 317, 368
PcsI WCGNNNNNNNCGW 1 cut(s) 492
PctI GAATGC 1 cut(s) 884
PdmI GAANNNNTTC 1 cut(s) 542
PfeI GAWTC 4 cut(s) 342, 516, 728, 998
PflMI CCANNNNNTGG 1 cut(s) 772
PkrI GCNGC 5 cut(s) 177, 320, 338, 371, 788
PleI GAGTC 1 cut(s) 77
PpsI GAGTC 1 cut(s) 77
PpuMI RGGWCCY 1 cut(s) 795
Psp124BI GAGCTC 1 cut(s) 312
Psp5II RGGWCCY 1 cut(s) 795
Psp6I CCWGG 3 cut(s) 32, 243, 731
PspFI CCCAGC 1 cut(s) 1221
PspGI CCWGG 3 cut(s) 32, 243, 731
PspN4I GGNNCC 8 cut(s) 42, 183, 265, 400, 512, 796, 797, 1187
PspOMI GGGCCC 1 cut(s) 398
PspPI GGNCC 9 cut(s) 40, 181, 241, 398, 399, 492, 511, 705, 795
PspPPI RGGWCCY 1 cut(s) 795
PstNI CAGNNNCTG 1 cut(s) 772
PsuI RGATCY 1 cut(s) 282
PvuII CAGCTG 1 cut(s) 1225
RsaI GTAC 3 cut(s) 413, 551, 988
RsaNI GTAC 3 cut(s) 412, 550, 987
Rsr2I CGGWCCG 1 cut(s) 492
RsrII CGGWCCG 1 cut(s) 492
SacI GAGCTC 1 cut(s) 312
SalI GTCGAC 1 cut(s) 80
SapI GCTCTTC 2 cut(s) 317, 368
SaqAI TTAA 2 cut(s) 957, 1068
SatI GCNGC 5 cut(s) 176, 319, 337, 370, 787
Sau3AI GATC 4 cut(s) 109, 282, 442, 965
Sau96I GGNCC 9 cut(s) 40, 181, 241, 398, 399, 492, 511, 705, 795
SchI GAGTC 1 cut(s) 77
ScrFI CCNGG 7 cut(s) 34, 245, 634, 656, 657, 733, 1199
SduI GDGCHC 5 cut(s) 266, 312, 402, 612, 690
SfaNI GCATC 1 cut(s) 972
SfcI CTRYAG 1 cut(s) 874
Sfr274I CTCGAG 1 cut(s) 916
SinI GGWCC 7 cut(s) 40, 181, 241, 492, 511, 705, 795
SlaI CTCGAG 1 cut(s) 916
SmaI CCCGGG 1 cut(s) 657
SmlI CTYRAG 2 cut(s) 916, 1103
SmoI CTYRAG 2 cut(s) 916, 1103
Sse9I AATT 4 cut(s) 553, 569, 710, 958
SseBI AGGCCT 1 cut(s) 248
SspI AATATT 1 cut(s) 1064
SspMI CTAG 1 cut(s) 908
SstI GAGCTC 1 cut(s) 312
StuI AGGCCT 1 cut(s) 248
StyD4I CCNGG 7 cut(s) 32, 243, 632, 654, 655, 731, 1197
StyI CCWWGG 3 cut(s) 87, 448, 603
TaaI ACNGT 2 cut(s) 934, 1150
TaiI ACGT 2 cut(s) 81, 200
TaqI TCGA 3 cut(s) 81, 327, 917
TaqII GACCGA 1 cut(s) 528
TasI AATT 4 cut(s) 553, 569, 710, 958
TatI WGTACW 1 cut(s) 549
TauI GCSGC 3 cut(s) 178, 321, 339
TfiI GAWTC 4 cut(s) 342, 516, 728, 998
Tru1I TTAA 2 cut(s) 957, 1068
Tru9I TTAA 2 cut(s) 957, 1068
TscAI CASTG 2 cut(s) 908, 1155
TseI GCWGC 2 cut(s) 369, 786
TspDTI ATGAA 3 cut(s) 703, 1005, 1030
TspGWI ACGGA 3 cut(s) 201, 472, 484
TspMI CCCGGG 1 cut(s) 655
TspRI CASTG 2 cut(s) 908, 1155
Van91I CCANNNNNTGG 1 cut(s) 772
VpaK11BI GGWCC 7 cut(s) 40, 181, 241, 492, 511, 705, 795
XapI RAATTY 1 cut(s) 710
XcmI CCANNNNNNNNNTGG 1 cut(s) 715
XhoI CTCGAG 1 cut(s) 916
XmaI CCCGGG 1 cut(s) 655
XmiI GTMKAC 1 cut(s) 81
XmnI GAANNNNTTC 1 cut(s) 542
XspI CTAG 1 cut(s) 908
ZraI GACGTC 2 cut(s) 79, 198
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.