Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr4

Orthogroup ID

OG0001367

Physical Location & Seq

Genomic Coordinates Reverse (-)

20054658 .. 20056828

Gene Structure 2171 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom04g17820.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1245 bp

ATGACCGCCGCCTCCTCCCCGCCTTTTCAATTCGTCGTTCTAGACGGGACTCCTGATTTACTCACCACTCCCCACATGGCGCAGTCAATGCAGCCTCCCAATTCGGCCTCCGATTCCGAACCCGACGACTCCCGCTCTCTCTCCACCCACACGATCCAGAACCAAAACCCCAAGCTCCTCCACCTGTCCTTCAACCAGGACCACAGCTGCTTCTCCGTCGCCACGGACTCCGGCTTCCGCGTCTACAACTGCGACCCCGTCCGCGAGCTCTTCCGCCGTGATTCCGATCAGCGGGGCGTCGGAATGGTCCAAATGCTCTTCCGCTACCAAATCCTCGCCCTGGTCGGAGGCGGACCCGACCCTCTCTACCCACCCAGCAAAGTCATGATGTGGGACGACAATGAGTCCCGGTGCATCGGCGAGCTCTCTTTCCGGTCGGAGGTCAGAGGCGTCAGGCTCCGCCGCGACCGAATCGTCGTCGTTTTGGAGCACAAAATCTTCCTCTACAACATCTCCGACTTAACGCTCGATCATCAGATCGTGACCATCTCCAACCCTAAAGGACTGTGTGAGGTCTCGCAGGGTTCGGGTCACCCCTTGCTGGTGTGCCCGGGTATCCAAAAGGGTCAAGTTCGGGTCGACCATTACGGGTCAAAGCGGACCAAGTTTATTGTCGCCCACGATTCGAGGCTCGCTTGCTTGGGGCTCACGCAGGACGGCCGGCTTCTCGCTACCGCCAGCAGTAAAGGGACCTTGGTTCGGATTTTCAATGCTTTGGATGGTTCATTACTACAAGAGGTAAGGCGAGGAGCAGAGAGAGCAGAGATTTACAGTCTTGCTTTCTCTTCTGGTGCACAATGGCTAGCTGTGTCAAGTGACAAGGGCACCGTCCATGTTTTCAGCGTTAAGGTTGATTCGGGATCCTTGGGGTGTGAGAGATCACACAGGCGCAGTGCATCAGAATCCAATCTTCCTAGTCCATCGGGCATTTCACCCCTCTCTTTCATGAAAGGTTTTTCGTTCTCAGGCGTGCTGCCAAAGTATTTCAGCTCAGAATGGTCTGTGGCTAAATATCACTTGCAGGAAGGTTTGCGGTACATTGTTGCCTTTGGCCACCAGAAGAACACAGTAATGATTCTCGGCATGGACGGAAGCTTCTACCGATGCCAGTTTGACCCCGAAAATGGAGGAGAGATGACTCAGATTGAATACTATAATTTTCTAAAGCCAAAAGAAACTTCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000045 GO:0000407 GO:0000422 GO:0003674 GO:0005488 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006464 GO:0006497 GO:0006807 GO:0006914 GO:0006996 GO:0007005 GO:0007033 GO:0008104 GO:0008150 GO:0008152 GO:0008289 GO:0009056 GO:0009058 GO:0009059 GO:0009987 GO:0016020 GO:0016043 GO:0016236 GO:0019538 GO:0019898 GO:0022411 GO:0022607 GO:0032266 GO:0033036 GO:0034045 GO:0034497 GO:0034613 GO:0034645 GO:0035091 GO:0036211 GO:0042157 GO:0042158 GO:0043167 GO:0043168 GO:0043170 GO:0043412 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044260 GO:0044267 GO:0044424 GO:0044425 GO:0044444 GO:0044464 GO:0044804 GO:0051179 GO:0051641 GO:0061726 GO:0061919 GO:0070727 GO:0070925 GO:0071704 GO:0071840 GO:0080025 GO:0098805 GO:1901564 GO:1901566 GO:1901576 GO:1901981 GO:1902936 GO:1903008 GO:1905037

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WD40

Protein Analysis

415

Amino Acids

45.93

Weight (kDa)

7.65

Isoelectric Point (pI)

43.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PROPPIN	PF21032	61 - 304	7e-31	PROPPIN
Beta-prop_THOC3	PF25174	126 - 303	2e-11	THOC3 beta-propeller domain
WD40_Prp19	PF24814	126 - 303	2.3e-06	Prp19 WD40 domain
Beta-prop_EML_2	PF23414	209 - 305	3.3e-06	Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR5	PF25175	226 - 304	9.6e-07	WDR5 beta-propeller domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001367)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G62770 AT3G62770
fragaria_vesca	FvH4_2g25170 FvH4_6g06350 FvH4_6g06350 FvH4_6g06350 FvH4_6g06370 FvH4_6g06370 FvH4_6g06370 FvH4_6g06370
malus_domestica	MD03G1283100.v1.1 MD04G1202000.v1.1 MD11G1303400.v1.1 MD12G1216000.v1.1 MD12G1216100.v1.1
prunus_persica	Prupe.6G322300_v2.0.a1 Prupe.8G256500_v2.0.a1
pyrus_communis	pycom03g22400 pycom04g17820 pycom11g26510 pycom12g20160
rosa_chinensis	RchiOBHm_Chr3g0455431 RchiOBHm_Chr3g0455461 RchiOBHm_Chr6g0293291
rosa_laevigata	RLG00000011961 RLG00000025360 RLG00000025363
rosa_multiflora	Rmu_sc0003728.1_g000001 Rmu_sc0008350.1_g000001 Rmu_ssc0000162.1_g000036
rosa_roxburghii	Rroxscaffold_6G00424260 Rroxscaffold_6G00424290 Rroxscaffold_7G00174280
rosa_rugosa	Rorug03G0007500 Rorug03G0007800 Rorug06G0234300
rosa_samantha	Rh2AG090700 Rh3AG066800 Rh3AG067200 Rh3BG069200 Rh3BG069500 Rh3CG067600 Rh3CG068000 Rh3DG069200 Rh3DG069500 Rh5BG179700 Rh6AG347100 Rh6BG354400 Rh6CG214700 Rh6DG204600
rosa_wichuraiana	Rw3G005280 Rw3G005310 Rw6G030210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	473
AccB1I	GGYRCC	1 cut(s)	884
AccBSI	CCGCTC	1 cut(s)	135
AccI	GTMKAC	2 cut(s)	243, 639
AccII	CGCG	3 cut(s)	240, 264, 465
AclWI	GGATC	3 cut(s)	148, 915, 928
AcoI	YGGCCR	2 cut(s)	718, 1111
AcyI	GRCGYC	2 cut(s)	297, 450
AfaI	GTAC	1 cut(s)	1097
AfiI	CCNNNNNNNGG	6 cut(s)	291, 340, 439, 601, 759, 1184
AgsI	TTSAA	4 cut(s)	29, 193, 769, 1208
AhdI	GACNNNNNGTC	1 cut(s)	403
AjnI	CCWGG	2 cut(s)	195, 339
AjuI	GAANNNNNNNTTGG	1 cut(s)	1222
AluBI	AGCT	7 cut(s)	175, 207, 268, 424, 866, 1050, 1155
AluI	AGCT	7 cut(s)	175, 207, 268, 424, 866, 1050, 1155
Alw21I	GWGCWC	4 cut(s)	270, 426, 492, 856
Alw26I	GTCTC	1 cut(s)	580
Alw44I	GTGCAC	1 cut(s)	852
AlwI	GGATC	3 cut(s)	148, 915, 928
Ama87I	CYCGRG	1 cut(s)	610
AoxI	GGCC	3 cut(s)	105, 718, 1111
ApaLI	GTGCAC	1 cut(s)	852
ApeKI	GCWGC	3 cut(s)	91, 207, 1033
AspLEI	GCGC	2 cut(s)	82, 951
AspS9I	GGNCC	5 cut(s)	199, 307, 353, 660, 750
AsuC2I	CCSGG	3 cut(s)	409, 611, 612
AsuHPI	GGTGA	3 cut(s)	55, 584, 984
AsuNHI	GCTAGC	1 cut(s)	862
AvaI	CYCGRG	1 cut(s)	610
AvaII	GGWCC	5 cut(s)	199, 307, 353, 660, 750
BaeGI	GKGCMC	3 cut(s)	611, 856, 887
BalI	TGGCCA	1 cut(s)	1113
BamHI	GGATCC	1 cut(s)	920
BanI	GGYRCC	1 cut(s)	884
BanII	GRGCYC	3 cut(s)	270, 426, 708
Bbv12I	GWGCWC	4 cut(s)	270, 426, 492, 856
BbvI	GCAGC	3 cut(s)	103, 194, 1020
BccI	CCATC	3 cut(s)	554, 773, 988
BceAI	ACGGC	2 cut(s)	261, 733
BciT130I	CCWGG	2 cut(s)	197, 341
BciVI	GTATCC	1 cut(s)	626
BcnI	CCSGG	3 cut(s)	409, 611, 612
BcoDI	GTCTC	1 cut(s)	580
BfaI	CTAG	3 cut(s)	41, 863, 975
BfuI	GTATCC	1 cut(s)	626
BisI	GCNGC	5 cut(s)	9, 92, 208, 463, 1034
BlsI	GCNGC	5 cut(s)	10, 93, 209, 464, 1035
Bme1390I	CCNGG	5 cut(s)	197, 341, 409, 611, 612
Bme18I	GGWCC	5 cut(s)	199, 307, 353, 660, 750
BmeRI	GACNNNNNGTC	1 cut(s)	403
BmeT110I	CYCGRG	1 cut(s)	610
BmgT120I	GGNCC	5 cut(s)	199, 307, 353, 660, 750
BmiI	GGNNCC	5 cut(s)	355, 458, 751, 886, 922
BmrFI	CCNGG	5 cut(s)	197, 341, 409, 611, 612
BmsI	GCATC	3 cut(s)	423, 965, 1154
BmtI	GCTAGC	1 cut(s)	866
BpuMI	CCSGG	3 cut(s)	409, 611, 612
BsaBI	GATNNNNATC	1 cut(s)	285
BsaHI	GRCGYC	2 cut(s)	297, 450
BsaI	GGTCTC	1 cut(s)	580
BsaJI	CCNNGG	5 cut(s)	222, 339, 610, 753, 924
BsaWI	WCCGGW	1 cut(s)	432
BsaXI	ACNNNNNCTCC	2 cut(s)	497, 527
Bsc4I	CCNNNNNNNGG	6 cut(s)	291, 340, 439, 601, 759, 1184
Bse118I	RCCGGY	1 cut(s)	720
Bse1I	ACTGG	1 cut(s)	1168
Bse8I	GATNNNNATC	1 cut(s)	285
BseBI	CCWGG	2 cut(s)	197, 341
BseDI	CCNNGG	5 cut(s)	222, 339, 610, 753, 924
BseGI	GGATG	1 cut(s)	784
BseJI	GATNNNNATC	1 cut(s)	285
BseLI	CCNNNNNNNGG	6 cut(s)	291, 340, 439, 601, 759, 1184
BseMII	CTCAG	3 cut(s)	1038, 1065, 1214
BseNI	ACTGG	1 cut(s)	1168
BseRI	GAGGAG	4 cut(s)	4, 167, 822, 1203
BseSI	GKGCMC	3 cut(s)	611, 856, 887
BseX3I	CGGCCG	1 cut(s)	718
BseXI	GCAGC	3 cut(s)	103, 194, 1020
BseYI	CCCAGC	1 cut(s)	374
Bsh1236I	CGCG	3 cut(s)	240, 264, 465
Bsh1285I	CGRYCG	3 cut(s)	437, 469, 721
BshFI	GGCC	3 cut(s)	107, 720, 1113
BshNI	GGYRCC	1 cut(s)	884
BsiEI	CGRYCG	3 cut(s)	437, 469, 721
BsiHKAI	GWGCWC	4 cut(s)	270, 426, 492, 856
BsiHKCI	CYCGRG	1 cut(s)	610
BsiSI	CCGG	5 cut(s)	231, 409, 433, 611, 721
BslFI	GGGAC	4 cut(s)	61, 391, 407, 763
BslI	CCNNNNNNNGG	6 cut(s)	291, 340, 439, 601, 759, 1184
BsmAI	GTCTC	1 cut(s)	580
BsmFI	GGGAC	4 cut(s)	61, 391, 407, 763
BsnI	GGCC	3 cut(s)	107, 720, 1113
Bso31I	GGTCTC	1 cut(s)	580
BsoBI	CYCGRG	1 cut(s)	610
Bsp1286I	GDGCHC	7 cut(s)	270, 426, 492, 611, 708, 856, 887
Bsp143I	GATC	6 cut(s)	153, 286, 529, 537, 920, 938
BspANI	GGCC	3 cut(s)	107, 720, 1113
BspCNI	CTCAG	3 cut(s)	1037, 1064, 1213
BspFNI	CGCG	3 cut(s)	240, 264, 465
BspHI	TCATGA	2 cut(s)	384, 1005
BspLI	GGNNCC	5 cut(s)	355, 458, 751, 886, 922
BspOI	GCTAGC	1 cut(s)	866
BspPI	GGATC	3 cut(s)	148, 915, 928
BspQI	GCTCTTC	2 cut(s)	275, 323
BspT107I	GGYRCC	1 cut(s)	884
BspTNI	GGTCTC	1 cut(s)	580
BsrBI	CCGCTC	1 cut(s)	135
BsrFI	RCCGGY	1 cut(s)	720
BsrI	ACTGG	1 cut(s)	1168
BssAI	RCCGGY	1 cut(s)	720
BssECI	CCNNGG	5 cut(s)	222, 339, 610, 753, 924
BssMI	GATC	6 cut(s)	153, 286, 529, 537, 920, 938
BssNI	GRCGYC	2 cut(s)	297, 450
BssT1I	CCWWGG	2 cut(s)	753, 924
Bst2UI	CCWGG	2 cut(s)	197, 341
Bst4CI	ACNGT	4 cut(s)	567, 833, 889, 1129
Bst6I	CTCTTC	3 cut(s)	275, 323, 850
BstACI	GRCGYC	2 cut(s)	297, 450
BstAPI	GCANNNNNTGC	1 cut(s)	88
BstC8I	GCNNGC	8 cut(s)	266, 422, 693, 697, 722, 739, 864, 1031
BstDEI	CTNAG	3 cut(s)	1024, 1051, 1200
BstDSI	CCRYGG	1 cut(s)	222
BstEII	GGTNACC	1 cut(s)	590
BstF5I	GGATG	1 cut(s)	784
BstFNI	CGCG	3 cut(s)	240, 264, 465
BstHHI	GCGC	2 cut(s)	82, 951
BstKTI	GATC	6 cut(s)	156, 289, 532, 540, 923, 941
BstMAI	GTCTC	1 cut(s)	580
BstMBI	GATC	6 cut(s)	153, 286, 529, 537, 920, 938
BstMCI	CGRYCG	3 cut(s)	437, 469, 721
BstMWI	GCNNNNNNNGC	2 cut(s)	88, 818
BstNI	CCWGG	2 cut(s)	197, 341
BstPI	GGTNACC	1 cut(s)	590
BstSCI	CCNGG	5 cut(s)	195, 339, 407, 609, 610
BstSLI	GKGCMC	3 cut(s)	611, 856, 887
BstUI	CGCG	3 cut(s)	240, 264, 465
BstV1I	GCAGC	3 cut(s)	103, 194, 1020
BstX2I	RGATCY	1 cut(s)	920
BstYI	RGATCY	1 cut(s)	920
BstZI	CGGCCG	1 cut(s)	718
BsuI	GTATCC	1 cut(s)	626
BsuRI	GGCC	3 cut(s)	107, 720, 1113
BtgI	CCRYGG	1 cut(s)	222
BtsCI	GGATG	1 cut(s)	784
BtsI	GCAGTG	1 cut(s)	958
BtsIMutI	CAGTG	1 cut(s)	958
Cac8I	GCNNGC	8 cut(s)	266, 422, 693, 697, 722, 739, 864, 1031
CciI	TCATGA	2 cut(s)	384, 1005
CfoI	GCGC	2 cut(s)	82, 951
Cfr10I	RCCGGY	1 cut(s)	720
Cfr13I	GGNCC	5 cut(s)	199, 307, 353, 660, 750
Cfr9I	CCCGGG	1 cut(s)	610
CseI	GACGC	3 cut(s)	229, 286, 439
Csp6I	GTAC	1 cut(s)	1096
CviAII	CATG	5 cut(s)	76, 385, 893, 1006, 1144
CviQI	GTAC	1 cut(s)	1096
DdeI	CTNAG	3 cut(s)	1024, 1051, 1200
DpnI	GATC	6 cut(s)	155, 288, 531, 539, 922, 940
DpnII	GATC	6 cut(s)	153, 286, 529, 537, 920, 938
DrdI	GACNNNNNNGTC	1 cut(s)	473
DriI	GACNNNNNGTC	1 cut(s)	403
DseDI	GACNNNNNNGTC	1 cut(s)	473
EaeI	YGGCCR	2 cut(s)	718, 1111
EagI	CGGCCG	1 cut(s)	718
Eam1104I	CTCTTC	3 cut(s)	275, 323, 850
Eam1105I	GACNNNNNGTC	1 cut(s)	403
EarI	CTCTTC	3 cut(s)	275, 323, 850
EciI	GGCGGA	3 cut(s)	263, 366, 449
Ecl136II	GAGCTC	2 cut(s)	268, 424
EclXI	CGGCCG	1 cut(s)	718
Eco130I	CCWWGG	2 cut(s)	753, 924
Eco24I	GRGCYC	3 cut(s)	270, 426, 708
Eco31I	GGTCTC	1 cut(s)	580
Eco47I	GGWCC	5 cut(s)	199, 307, 353, 660, 750
Eco52I	CGGCCG	1 cut(s)	718
Eco53kI	GAGCTC	2 cut(s)	268, 424
Eco88I	CYCGRG	1 cut(s)	610
Eco91I	GGTNACC	1 cut(s)	590
EcoICRI	GAGCTC	2 cut(s)	268, 424
EcoO109I	RGGNCCY	1 cut(s)	750
EcoO65I	GGTNACC	1 cut(s)	590
EcoRII	CCWGG	2 cut(s)	195, 339
EcoT14I	CCWWGG	2 cut(s)	753, 924
EcoT38I	GRGCYC	3 cut(s)	270, 426, 708
ErhI	CCWWGG	2 cut(s)	753, 924
FaeI	CATG	5 cut(s)	79, 388, 896, 1009, 1147
FaiI	YATR	6 cut(s)	77, 386, 894, 1007, 1145, 1215
FaqI	GGGAC	4 cut(s)	61, 391, 407, 763
FatI	CATG	5 cut(s)	75, 384, 892, 1005, 1143
FauI	CCCGC	3 cut(s)	27, 140, 285
FblI	GTMKAC	2 cut(s)	243, 639
Fnu4HI	GCNGC	5 cut(s)	9, 92, 208, 463, 1034
FokI	GGATG	1 cut(s)	791
FriOI	GRGCYC	3 cut(s)	270, 426, 708
Fsp4HI	GCNGC	5 cut(s)	9, 92, 208, 463, 1034
FspBI	CTAG	3 cut(s)	41, 863, 975
GlaI	GCGC	2 cut(s)	81, 950
GluI	GCNGC	5 cut(s)	9, 92, 208, 463, 1034
GsaI	CCCAGC	1 cut(s)	378
HaeIII	GGCC	3 cut(s)	107, 720, 1113
HapII	CCGG	5 cut(s)	231, 409, 433, 611, 721
HgaI	GACGC	3 cut(s)	229, 286, 439
HhaI	GCGC	2 cut(s)	82, 951
Hin1I	GRCGYC	2 cut(s)	297, 450
Hin1II	CATG	5 cut(s)	79, 388, 896, 1009, 1147
Hin6I	GCGC	2 cut(s)	80, 949
HinP1I	GCGC	2 cut(s)	80, 949
HincII	GTYRAC	1 cut(s)	640
HindII	GTYRAC	1 cut(s)	640
HindIII	AAGCTT	1 cut(s)	1153
HpaII	CCGG	5 cut(s)	231, 409, 433, 611, 721
HphI	GGTGA	3 cut(s)	55, 584, 984
Hpy166II	GTNNAC	3 cut(s)	244, 640, 854
Hpy188III	TCNNGA	8 cut(s)	41, 53, 157, 385, 541, 918, 1006, 1242
Hpy8I	GTNNAC	3 cut(s)	244, 640, 854
Hpy99I	CGWCG	6 cut(s)	38, 128, 221, 302, 479, 482
HpyAV	CCTTC	2 cut(s)	199, 1079
HpyCH4III	ACNGT	4 cut(s)	567, 833, 889, 1129
HpyCH4V	TGCA	5 cut(s)	91, 414, 854, 956, 1081
HpyF10VI	GCNNNNNNNGC	2 cut(s)	88, 818
HpyF3I	CTNAG	3 cut(s)	1024, 1051, 1200
Hsp92I	GRCGYC	2 cut(s)	297, 450
Hsp92II	CATG	5 cut(s)	79, 388, 896, 1009, 1147
HspAI	GCGC	2 cut(s)	80, 949
KroI	GCCGGC	1 cut(s)	720
KroNI	GCCGGC	1 cut(s)	722
Kzo9I	GATC	6 cut(s)	153, 286, 529, 537, 920, 938
LguI	GCTCTTC	2 cut(s)	275, 323
LmnI	GCTCC	4 cut(s)	180, 462, 487, 809
Lsp1109I	GCAGC	3 cut(s)	103, 194, 1020
LweI	GCATC	3 cut(s)	423, 965, 1154
MaeI	CTAG	3 cut(s)	41, 863, 975
MaeIII	GTNAC	3 cut(s)	541, 590, 875
MalI	GATC	6 cut(s)	155, 288, 531, 539, 922, 940
MbiI	CCGCTC	1 cut(s)	135
MboI	GATC	6 cut(s)	153, 286, 529, 537, 920, 938
MboII	GAAGA	6 cut(s)	262, 310, 490, 837, 962, 1132
MflI	RGATCY	1 cut(s)	920
MhlI	GDGCHC	7 cut(s)	270, 426, 492, 611, 708, 856, 887
MlsI	TGGCCA	1 cut(s)	1113
MluCI	AATT	3 cut(s)	29, 100, 1216
MluNI	TGGCCA	1 cut(s)	1113
MlyI	GAGTC	5 cut(s)	43, 122, 221, 413, 1192
MmeI	TCCRAC	5 cut(s)	280, 325, 417, 540, 576
Mox20I	TGGCCA	1 cut(s)	1113
MroNI	GCCGGC	1 cut(s)	720
MscI	TGGCCA	1 cut(s)	1113
MseI	TTAA	2 cut(s)	521, 906
MslI	CAYNNNNRTG	1 cut(s)	1130
Msp20I	TGGCCA	1 cut(s)	1113
MspA1I	CMGCKG	2 cut(s)	207, 292
MspI	CCGG	5 cut(s)	231, 409, 433, 611, 721
MspR9I	CCNGG	5 cut(s)	197, 341, 409, 611, 612
MvaI	CCWGG	2 cut(s)	197, 341
MvnI	CGCG	3 cut(s)	240, 264, 465
MwoI	GCNNNNNNNGC	2 cut(s)	88, 818
NaeI	GCCGGC	1 cut(s)	722
NciI	CCSGG	3 cut(s)	409, 611, 612
NdeII	GATC	6 cut(s)	153, 286, 529, 537, 920, 938
NgoMIV	GCCGGC	1 cut(s)	720
NheI	GCTAGC	1 cut(s)	862
NlaIII	CATG	5 cut(s)	79, 388, 896, 1009, 1147
NlaIV	GGNNCC	5 cut(s)	355, 458, 751, 886, 922
NmeAIII	GCCGAG	1 cut(s)	1119
NmuCI	GTSAC	3 cut(s)	541, 590, 875
PagI	TCATGA	2 cut(s)	384, 1005
PciSI	GCTCTTC	2 cut(s)	275, 323
PdiI	GCCGGC	1 cut(s)	722
PfeI	GAWTC	7 cut(s)	113, 281, 471, 683, 914, 962, 1135
PflFI	GACNNNGTC	1 cut(s)	257
PkrI	GCNGC	5 cut(s)	10, 93, 209, 464, 1035
PleI	GAGTC	5 cut(s)	43, 122, 221, 412, 1192
PpsI	GAGTC	5 cut(s)	43, 122, 221, 412, 1192
PpuMI	RGGWCCY	1 cut(s)	750
Psp124BI	GAGCTC	2 cut(s)	270, 426
Psp5II	RGGWCCY	1 cut(s)	750
Psp6I	CCWGG	2 cut(s)	195, 339
PspEI	GGTNACC	1 cut(s)	590
PspFI	CCCAGC	1 cut(s)	374
PspGI	CCWGG	2 cut(s)	195, 339
PspN4I	GGNNCC	5 cut(s)	355, 458, 751, 886, 922
PspPI	GGNCC	5 cut(s)	199, 307, 353, 660, 750
PspPPI	RGGWCCY	1 cut(s)	750
PsuI	RGATCY	1 cut(s)	920
PsyI	GACNNNGTC	1 cut(s)	257
PvuII	CAGCTG	1 cut(s)	207
RsaI	GTAC	1 cut(s)	1097
RsaNI	GTAC	1 cut(s)	1096
RseI	CAYNNNNRTG	1 cut(s)	1130
SacI	GAGCTC	2 cut(s)	270, 426
SalI	GTCGAC	1 cut(s)	638
SapI	GCTCTTC	2 cut(s)	275, 323
SaqAI	TTAA	2 cut(s)	521, 906
SatI	GCNGC	5 cut(s)	9, 92, 208, 463, 1034
Sau3AI	GATC	6 cut(s)	153, 286, 529, 537, 920, 938
Sau96I	GGNCC	5 cut(s)	199, 307, 353, 660, 750
SchI	GAGTC	5 cut(s)	43, 122, 221, 413, 1192
ScrFI	CCNGG	5 cut(s)	197, 341, 409, 611, 612
SduI	GDGCHC	7 cut(s)	270, 426, 492, 611, 708, 856, 887
SfaNI	GCATC	3 cut(s)	423, 965, 1154
SinI	GGWCC	5 cut(s)	199, 307, 353, 660, 750
SmaI	CCCGGG	1 cut(s)	612
SmiMI	CAYNNNNRTG	1 cut(s)	1130
Sse9I	AATT	3 cut(s)	29, 100, 1216
SspMI	CTAG	3 cut(s)	41, 863, 975
SstI	GAGCTC	2 cut(s)	270, 426
StyD4I	CCNGG	5 cut(s)	195, 339, 407, 609, 610
StyI	CCWWGG	2 cut(s)	753, 924
TaaI	ACNGT	4 cut(s)	567, 833, 889, 1129
TaqI	TCGA	3 cut(s)	528, 639, 686
TaqII	GACCGA	1 cut(s)	483
TasI	AATT	3 cut(s)	29, 100, 1216
TauI	GCSGC	2 cut(s)	11, 465
TfiI	GAWTC	7 cut(s)	113, 281, 471, 683, 914, 962, 1135
Tru1I	TTAA	2 cut(s)	521, 906
Tru9I	TTAA	2 cut(s)	521, 906
TscAI	CASTG	1 cut(s)	958
TseFI	GTSAC	3 cut(s)	541, 590, 875
TseI	GCWGC	3 cut(s)	91, 207, 1033
Tsp45I	GTSAC	3 cut(s)	541, 590, 875
TspDTI	ATGAA	3 cut(s)	774, 994, 1022
TspGWI	ACGGA	3 cut(s)	205, 239, 1164
TspMI	CCCGGG	1 cut(s)	610
TspRI	CASTG	1 cut(s)	958
Tth111I	GACNNNGTC	1 cut(s)	257
VneI	GTGCAC	1 cut(s)	852
VpaK11BI	GGWCC	5 cut(s)	199, 307, 353, 660, 750
XbaI	TCTAGA	1 cut(s)	40
XcmI	CCANNNNNNNNNTGG	1 cut(s)	73
XmaI	CCCGGG	1 cut(s)	610
XmiI	GTMKAC	2 cut(s)	243, 639
XspI	CTAG	3 cut(s)	41, 863, 975

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.