Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr04

Orthogroup ID

OG0001367

Physical Location & Seq

Genomic Coordinates Reverse (-)

28813246 .. 28815419

Gene Structure 2174 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD04G1202000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1176 bp

ATGGCGCAGCCGCAGTCAGAGCAGCCTCCCAGTTCGGCCTCCGATTCCGAACCCGACGACTCCCGCTCTCCCTCCACCCACACGATCCCGAACCAAAACCCCAAGCTCCTCCACCTGTCCTTCAACCAGGACCATAGCTGCTTCTCCGTCGCCACGGACTCCGGCTTCCGCGTCTACAACTGCGACCCCGTCCGCGAGCTCTTCCGCCGTGATTCCGATCAGCGGGGCGTCGGAATGGTCCAAATGCTCTTCCGCTACCAAATTCTCGCCCTGGTCGGAGGCGGACCCGACCCTCTCTACCCGCCCAACAAAGTCATGATGTGGGACGACAACGAGTCCCGGTGCATCGGCGAGCTCTCTTTCCGGTCGGAGGTCAGAGGCGTCAGGCTCCGCCGCGACCGAATCGTCGTCGTTTTGGAGCACAAAATCTTCCTCTACAATATCTCCGACTTAACGCTCGAGCATCAGATCGTGACCATCTCCAACCCTAAAGGACTGTGTGAGGTCTCGCAGGGTTCGGGTCACCCCTTGCTGGTGTGCCCGGGGCTCCAAAAGGGTCAAGTTCGGGTCGACCATTACGGGTCAAAGCGGACCAAGTTTATCGCCGCCCACGATTCGAGGCTCGCTTGCTTGGGGCTCACGCAGGACGGCCGGCTCCTTGCTACGGCCAGCAGTAAAGGGACCTTGGTTCGGATTTTCAATGCTTTGGATGGTTCATTACTACAAGAGGTAAGGCGAGGAGCAGAGAGAGCAGAGATTTACAGTCTTGCTTTCTCTTCTGGTGCACAATGGCTAGCTGTGTCAAGTGACAAGGGCACCGTTCATGTTTTCAGCGTTAAGGTTGATTCGGGATCCTTGGGGTGTGAGAGATCACACAGACGCAGTGCATCAGAATCCAATCTTCCTAGTCCATCAGGCATTTCATCCCTCTCTTTCATGAAAGGTTTATCGTTCTCAGGCGTGCTGCCAAAGTATTTCAGCTCAGAATGGTCAGTGGCTAAATATCACTTGCAGGAAGGTTTGCGGTACATTGTTGCCTTTGGCCACCAGAAGAACACAGTAGTGATTCTCGGCATGGACGGAAGCTTCTACCGATGCCAGTTTGACCCCGAAAATGGAGGAGAGATGACTCAGATTGAATACTATAATTTTCTAAAGCCAGAAGAAACTTCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000045 GO:0000407 GO:0000422 GO:0003674 GO:0005488 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006464 GO:0006497 GO:0006807 GO:0006914 GO:0006996 GO:0007005 GO:0007033 GO:0008104 GO:0008150 GO:0008152 GO:0008289 GO:0009056 GO:0009058 GO:0009059 GO:0009987 GO:0016020 GO:0016043 GO:0016236 GO:0019538 GO:0019898 GO:0022411 GO:0022607 GO:0032266 GO:0033036 GO:0034045 GO:0034497 GO:0034613 GO:0034645 GO:0035091 GO:0036211 GO:0042157 GO:0042158 GO:0043167 GO:0043168 GO:0043170 GO:0043412 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044260 GO:0044267 GO:0044424 GO:0044425 GO:0044444 GO:0044464 GO:0044804 GO:0051179 GO:0051641 GO:0061726 GO:0061919 GO:0070727 GO:0070925 GO:0071704 GO:0071840 GO:0080025 GO:0098805 GO:1901564 GO:1901566 GO:1901576 GO:1901981 GO:1902936 GO:1903008 GO:1905037

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WD40

Protein Analysis

392

Amino Acids

43.39

Weight (kDa)

7.18

Isoelectric Point (pI)

50.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PROPPIN	PF21032	38 - 285	3.9e-32	PROPPIN
Beta-prop_THOC3	PF25174	103 - 280	6.4e-12	THOC3 beta-propeller domain
WD40_Prp19	PF24814	103 - 280	5.7e-07	Prp19 WD40 domain
WD40_CDC20-Fz	PF24807	132 - 281	7.4e-06	CDC20/Fizzy WD40 domain
Beta-prop_EML_2	PF23414	186 - 282	4.4e-06	Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR5	PF25175	202 - 281	6.5e-07	WDR5 beta-propeller domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001367)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G62770 AT3G62770
fragaria_vesca	FvH4_2g25170 FvH4_6g06350 FvH4_6g06350 FvH4_6g06350 FvH4_6g06370 FvH4_6g06370 FvH4_6g06370 FvH4_6g06370
malus_domestica	MD03G1283100.v1.1 MD04G1202000.v1.1 MD11G1303400.v1.1 MD12G1216000.v1.1 MD12G1216100.v1.1
prunus_persica	Prupe.6G322300_v2.0.a1 Prupe.8G256500_v2.0.a1
pyrus_communis	pycom03g22400 pycom04g17820 pycom11g26510 pycom12g20160
rosa_chinensis	RchiOBHm_Chr3g0455431 RchiOBHm_Chr3g0455461 RchiOBHm_Chr6g0293291
rosa_laevigata	RLG00000011961 RLG00000025360 RLG00000025363
rosa_multiflora	Rmu_sc0003728.1_g000001 Rmu_sc0008350.1_g000001 Rmu_ssc0000162.1_g000036
rosa_roxburghii	Rroxscaffold_6G00424260 Rroxscaffold_6G00424290 Rroxscaffold_7G00174280
rosa_rugosa	Rorug03G0007500 Rorug03G0007800 Rorug06G0234300
rosa_samantha	Rh2AG090700 Rh3AG066800 Rh3AG067200 Rh3BG069200 Rh3BG069500 Rh3CG067600 Rh3CG068000 Rh3DG069200 Rh3DG069500 Rh5BG179700 Rh6AG347100 Rh6BG354400 Rh6CG214700 Rh6DG204600
rosa_wichuraiana	Rw3G005280 Rw3G005310 Rw6G030210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	404
AccB1I	GGYRCC	1 cut(s)	815
AccBSI	CCGCTC	1 cut(s)	66
AccI	GTMKAC	2 cut(s)	174, 570
AccII	CGCG	3 cut(s)	171, 195, 396
AclWI	GGATC	3 cut(s)	79, 846, 859
AcoI	YGGCCR	3 cut(s)	649, 666, 1042
AcsI	RAATTY	1 cut(s)	261
AcyI	GRCGYC	2 cut(s)	228, 381
AfaI	GTAC	1 cut(s)	1028
AfiI	CCNNNNNNNGG	6 cut(s)	222, 370, 532, 664, 690, 1115
AgsI	TTSAA	3 cut(s)	124, 700, 1139
AhdI	GACNNNNNGTC	1 cut(s)	334
AjnI	CCWGG	2 cut(s)	126, 270
AleI	CACNNNNGTG	1 cut(s)	1061
AluBI	AGCT	7 cut(s)	106, 138, 199, 355, 797, 981, 1086
AluI	AGCT	7 cut(s)	106, 138, 199, 355, 797, 981, 1086
Alw21I	GWGCWC	4 cut(s)	201, 357, 423, 787
Alw26I	GTCTC	1 cut(s)	511
Alw44I	GTGCAC	1 cut(s)	783
AlwI	GGATC	3 cut(s)	79, 846, 859
Ama87I	CYCGRG	2 cut(s)	458, 541
AoxI	GGCC	4 cut(s)	36, 649, 666, 1042
ApaLI	GTGCAC	1 cut(s)	783
ApeKI	GCWGC	4 cut(s)	7, 22, 138, 964
ApoI	RAATTY	1 cut(s)	261
AspLEI	GCGC	1 cut(s)	7
AspS9I	GGNCC	5 cut(s)	130, 238, 284, 591, 681
AsuC2I	CCSGG	3 cut(s)	340, 542, 543
AsuHPI	GGTGA	1 cut(s)	515
AsuNHI	GCTAGC	1 cut(s)	793
AvaI	CYCGRG	2 cut(s)	458, 541
AvaII	GGWCC	5 cut(s)	130, 238, 284, 591, 681
BaeGI	GKGCMC	3 cut(s)	542, 787, 818
BalI	TGGCCA	1 cut(s)	1044
BamHI	GGATCC	1 cut(s)	851
BanI	GGYRCC	1 cut(s)	815
BanII	GRGCYC	4 cut(s)	201, 357, 549, 639
Bbv12I	GWGCWC	4 cut(s)	201, 357, 423, 787
BbvI	GCAGC	4 cut(s)	19, 34, 125, 951
BccI	CCATC	3 cut(s)	485, 704, 919
BceAI	ACGGC	3 cut(s)	192, 664, 681
BciT130I	CCWGG	2 cut(s)	128, 272
BcnI	CCSGG	3 cut(s)	340, 542, 543
BcoDI	GTCTC	1 cut(s)	511
BfaI	CTAG	2 cut(s)	794, 906
BisI	GCNGC	7 cut(s)	8, 11, 23, 139, 394, 606, 965
BlsI	GCNGC	7 cut(s)	9, 12, 24, 140, 395, 607, 966
Bme1390I	CCNGG	5 cut(s)	128, 272, 340, 542, 543
Bme18I	GGWCC	5 cut(s)	130, 238, 284, 591, 681
BmeRI	GACNNNNNGTC	1 cut(s)	334
BmeT110I	CYCGRG	2 cut(s)	458, 541
BmgT120I	GGNCC	5 cut(s)	130, 238, 284, 591, 681
BmiI	GGNNCC	7 cut(s)	286, 389, 548, 656, 682, 817, 853
BmrFI	CCNGG	5 cut(s)	128, 272, 340, 542, 543
BmrI	ACTGGG	1 cut(s)	24
BmsI	GCATC	4 cut(s)	354, 472, 896, 1085
BmtI	GCTAGC	1 cut(s)	797
BmuI	ACTGGG	1 cut(s)	24
BpuMI	CCSGG	3 cut(s)	340, 542, 543
BsaBI	GATNNNNATC	1 cut(s)	216
BsaHI	GRCGYC	2 cut(s)	228, 381
BsaI	GGTCTC	1 cut(s)	511
BsaJI	CCNNGG	6 cut(s)	153, 270, 541, 542, 684, 855
BsaWI	WCCGGW	1 cut(s)	363
BsaXI	ACNNNNNCTCC	2 cut(s)	428, 458
Bsc4I	CCNNNNNNNGG	6 cut(s)	222, 370, 532, 664, 690, 1115
Bse118I	RCCGGY	1 cut(s)	651
Bse1I	ACTGG	2 cut(s)	30, 1099
Bse8I	GATNNNNATC	1 cut(s)	216
BseBI	CCWGG	2 cut(s)	128, 272
BseDI	CCNNGG	6 cut(s)	153, 270, 541, 542, 684, 855
BseGI	GGATG	2 cut(s)	715, 923
BseJI	GATNNNNATC	1 cut(s)	216
BseLI	CCNNNNNNNGG	6 cut(s)	222, 370, 532, 664, 690, 1115
BseMII	CTCAG	3 cut(s)	969, 996, 1145
BseNI	ACTGG	2 cut(s)	30, 1099
BseRI	GAGGAG	3 cut(s)	98, 753, 1134
BseSI	GKGCMC	3 cut(s)	542, 787, 818
BseX3I	CGGCCG	1 cut(s)	649
BseXI	GCAGC	4 cut(s)	19, 34, 125, 951
Bsh1236I	CGCG	3 cut(s)	171, 195, 396
Bsh1285I	CGRYCG	3 cut(s)	368, 400, 652
BshFI	GGCC	4 cut(s)	38, 651, 668, 1044
BshNI	GGYRCC	1 cut(s)	815
BsiEI	CGRYCG	3 cut(s)	368, 400, 652
BsiHKAI	GWGCWC	4 cut(s)	201, 357, 423, 787
BsiHKCI	CYCGRG	2 cut(s)	458, 541
BsiSI	CCGG	5 cut(s)	162, 340, 364, 542, 652
BslFI	GGGAC	3 cut(s)	322, 338, 694
BslI	CCNNNNNNNGG	6 cut(s)	222, 370, 532, 664, 690, 1115
BsmAI	GTCTC	1 cut(s)	511
BsmFI	GGGAC	3 cut(s)	322, 338, 694
BsnI	GGCC	4 cut(s)	38, 651, 668, 1044
Bso31I	GGTCTC	1 cut(s)	511
BsoBI	CYCGRG	2 cut(s)	458, 541
Bsp1286I	GDGCHC	8 cut(s)	201, 357, 423, 542, 549, 639, 787, 818
Bsp143I	GATC	5 cut(s)	84, 217, 468, 851, 869
BspANI	GGCC	4 cut(s)	38, 651, 668, 1044
BspCNI	CTCAG	3 cut(s)	968, 995, 1144
BspFNI	CGCG	3 cut(s)	171, 195, 396
BspHI	TCATGA	2 cut(s)	315, 936
BspLI	GGNNCC	7 cut(s)	286, 389, 548, 656, 682, 817, 853
BspOI	GCTAGC	1 cut(s)	797
BspPI	GGATC	3 cut(s)	79, 846, 859
BspQI	GCTCTTC	2 cut(s)	206, 254
BspT107I	GGYRCC	1 cut(s)	815
BspTNI	GGTCTC	1 cut(s)	511
BsrBI	CCGCTC	1 cut(s)	66
BsrFI	RCCGGY	1 cut(s)	651
BsrI	ACTGG	2 cut(s)	30, 1099
BssAI	RCCGGY	1 cut(s)	651
BssECI	CCNNGG	6 cut(s)	153, 270, 541, 542, 684, 855
BssMI	GATC	5 cut(s)	84, 217, 468, 851, 869
BssNI	GRCGYC	2 cut(s)	228, 381
BssT1I	CCWWGG	2 cut(s)	684, 855
Bst2UI	CCWGG	2 cut(s)	128, 272
Bst4CI	ACNGT	4 cut(s)	498, 764, 820, 1060
Bst6I	CTCTTC	3 cut(s)	206, 254, 781
BstACI	GRCGYC	2 cut(s)	228, 381
BstC8I	GCNNGC	8 cut(s)	197, 353, 624, 628, 653, 670, 795, 962
BstDEI	CTNAG	3 cut(s)	955, 982, 1131
BstDSI	CCRYGG	1 cut(s)	153
BstEII	GGTNACC	1 cut(s)	521
BstF5I	GGATG	2 cut(s)	715, 923
BstFNI	CGCG	3 cut(s)	171, 195, 396
BstHHI	GCGC	1 cut(s)	7
BstKTI	GATC	5 cut(s)	87, 220, 471, 854, 872
BstMAI	GTCTC	1 cut(s)	511
BstMBI	GATC	5 cut(s)	84, 217, 468, 851, 869
BstMCI	CGRYCG	3 cut(s)	368, 400, 652
BstMWI	GCNNNNNNNGC	2 cut(s)	19, 749
BstNI	CCWGG	2 cut(s)	128, 272
BstPI	GGTNACC	1 cut(s)	521
BstSCI	CCNGG	5 cut(s)	126, 270, 338, 540, 541
BstSLI	GKGCMC	3 cut(s)	542, 787, 818
BstUI	CGCG	3 cut(s)	171, 195, 396
BstV1I	GCAGC	4 cut(s)	19, 34, 125, 951
BstX2I	RGATCY	1 cut(s)	851
BstYI	RGATCY	1 cut(s)	851
BstZI	CGGCCG	1 cut(s)	649
BsuRI	GGCC	4 cut(s)	38, 651, 668, 1044
BtgI	CCRYGG	1 cut(s)	153
BtsCI	GGATG	2 cut(s)	715, 923
BtsI	GCAGTG	1 cut(s)	889
BtsIMutI	CAGTG	2 cut(s)	889, 999
Cac8I	GCNNGC	8 cut(s)	197, 353, 624, 628, 653, 670, 795, 962
CciI	TCATGA	2 cut(s)	315, 936
CfoI	GCGC	1 cut(s)	7
Cfr10I	RCCGGY	1 cut(s)	651
Cfr13I	GGNCC	5 cut(s)	130, 238, 284, 591, 681
Cfr9I	CCCGGG	1 cut(s)	541
CseI	GACGC	4 cut(s)	160, 217, 370, 888
Csp6I	GTAC	1 cut(s)	1027
CviAII	CATG	4 cut(s)	316, 824, 937, 1075
CviQI	GTAC	1 cut(s)	1027
DdeI	CTNAG	3 cut(s)	955, 982, 1131
DpnI	GATC	5 cut(s)	86, 219, 470, 853, 871
DpnII	GATC	5 cut(s)	84, 217, 468, 851, 869
DrdI	GACNNNNNNGTC	1 cut(s)	404
DriI	GACNNNNNGTC	1 cut(s)	334
DseDI	GACNNNNNNGTC	1 cut(s)	404
EaeI	YGGCCR	3 cut(s)	649, 666, 1042
EagI	CGGCCG	1 cut(s)	649
Eam1104I	CTCTTC	3 cut(s)	206, 254, 781
Eam1105I	GACNNNNNGTC	1 cut(s)	334
EarI	CTCTTC	3 cut(s)	206, 254, 781
EciI	GGCGGA	3 cut(s)	194, 297, 380
Ecl136II	GAGCTC	2 cut(s)	199, 355
EclXI	CGGCCG	1 cut(s)	649
Eco130I	CCWWGG	2 cut(s)	684, 855
Eco24I	GRGCYC	4 cut(s)	201, 357, 549, 639
Eco31I	GGTCTC	1 cut(s)	511
Eco47I	GGWCC	5 cut(s)	130, 238, 284, 591, 681
Eco52I	CGGCCG	1 cut(s)	649
Eco53kI	GAGCTC	2 cut(s)	199, 355
Eco88I	CYCGRG	2 cut(s)	458, 541
Eco91I	GGTNACC	1 cut(s)	521
EcoICRI	GAGCTC	2 cut(s)	199, 355
EcoO109I	RGGNCCY	1 cut(s)	681
EcoO65I	GGTNACC	1 cut(s)	521
EcoRII	CCWGG	2 cut(s)	126, 270
EcoT14I	CCWWGG	2 cut(s)	684, 855
EcoT38I	GRGCYC	4 cut(s)	201, 357, 549, 639
ErhI	CCWWGG	2 cut(s)	684, 855
FaeI	CATG	4 cut(s)	319, 827, 940, 1078
FaiI	YATR	6 cut(s)	135, 317, 825, 938, 1076, 1146
FaqI	GGGAC	3 cut(s)	322, 338, 694
FatI	CATG	4 cut(s)	315, 823, 936, 1074
FauI	CCCGC	3 cut(s)	71, 216, 309
FblI	GTMKAC	2 cut(s)	174, 570
Fnu4HI	GCNGC	7 cut(s)	8, 11, 23, 139, 394, 606, 965
FokI	GGATG	2 cut(s)	722, 910
FriOI	GRGCYC	4 cut(s)	201, 357, 549, 639
Fsp4HI	GCNGC	7 cut(s)	8, 11, 23, 139, 394, 606, 965
FspBI	CTAG	2 cut(s)	794, 906
GlaI	GCGC	1 cut(s)	6
GluI	GCNGC	7 cut(s)	8, 11, 23, 139, 394, 606, 965
HaeIII	GGCC	4 cut(s)	38, 651, 668, 1044
HapII	CCGG	5 cut(s)	162, 340, 364, 542, 652
HgaI	GACGC	4 cut(s)	160, 217, 370, 888
HhaI	GCGC	1 cut(s)	7
Hin1I	GRCGYC	2 cut(s)	228, 381
Hin1II	CATG	4 cut(s)	319, 827, 940, 1078
Hin6I	GCGC	1 cut(s)	5
HinP1I	GCGC	1 cut(s)	5
HincII	GTYRAC	1 cut(s)	571
HindII	GTYRAC	1 cut(s)	571
HindIII	AAGCTT	1 cut(s)	1084
HpaII	CCGG	5 cut(s)	162, 340, 364, 542, 652
HphI	GGTGA	1 cut(s)	515
Hpy166II	GTNNAC	3 cut(s)	175, 571, 785
Hpy188III	TCNNGA	6 cut(s)	88, 316, 472, 849, 937, 1173
Hpy8I	GTNNAC	3 cut(s)	175, 571, 785
Hpy99I	CGWCG	5 cut(s)	59, 152, 233, 410, 413
HpyAV	CCTTC	2 cut(s)	130, 1010
HpyCH4III	ACNGT	4 cut(s)	498, 764, 820, 1060
HpyCH4V	TGCA	4 cut(s)	345, 785, 887, 1012
HpyF10VI	GCNNNNNNNGC	2 cut(s)	19, 749
HpyF3I	CTNAG	3 cut(s)	955, 982, 1131
Hsp92I	GRCGYC	2 cut(s)	228, 381
Hsp92II	CATG	4 cut(s)	319, 827, 940, 1078
HspAI	GCGC	1 cut(s)	5
KroI	GCCGGC	1 cut(s)	651
KroNI	GCCGGC	1 cut(s)	653
Kzo9I	GATC	5 cut(s)	84, 217, 468, 851, 869
LguI	GCTCTTC	2 cut(s)	206, 254
LmnI	GCTCC	6 cut(s)	111, 393, 418, 552, 660, 740
Lsp1109I	GCAGC	4 cut(s)	19, 34, 125, 951
LweI	GCATC	4 cut(s)	354, 472, 896, 1085
MaeI	CTAG	2 cut(s)	794, 906
MaeIII	GTNAC	3 cut(s)	472, 521, 806
MalI	GATC	5 cut(s)	86, 219, 470, 853, 871
MbiI	CCGCTC	1 cut(s)	66
MboI	GATC	5 cut(s)	84, 217, 468, 851, 869
MboII	GAAGA	7 cut(s)	193, 241, 421, 768, 893, 1063, 1175
MflI	RGATCY	1 cut(s)	851
MhlI	GDGCHC	8 cut(s)	201, 357, 423, 542, 549, 639, 787, 818
MlsI	TGGCCA	1 cut(s)	1044
MluCI	AATT	2 cut(s)	261, 1147
MluNI	TGGCCA	1 cut(s)	1044
MlyI	GAGTC	4 cut(s)	53, 152, 344, 1123
MmeI	TCCRAC	5 cut(s)	211, 256, 348, 471, 507
Mox20I	TGGCCA	1 cut(s)	1044
MroNI	GCCGGC	1 cut(s)	651
MscI	TGGCCA	1 cut(s)	1044
MseI	TTAA	2 cut(s)	452, 837
MslI	CAYNNNNRTG	1 cut(s)	1061
Msp20I	TGGCCA	1 cut(s)	1044
MspA1I	CMGCKG	1 cut(s)	223
MspI	CCGG	5 cut(s)	162, 340, 364, 542, 652
MspR9I	CCNGG	5 cut(s)	128, 272, 340, 542, 543
MvaI	CCWGG	2 cut(s)	128, 272
MvnI	CGCG	3 cut(s)	171, 195, 396
MwoI	GCNNNNNNNGC	2 cut(s)	19, 749
NaeI	GCCGGC	1 cut(s)	653
NciI	CCSGG	3 cut(s)	340, 542, 543
NdeII	GATC	5 cut(s)	84, 217, 468, 851, 869
NgoMIV	GCCGGC	1 cut(s)	651
NheI	GCTAGC	1 cut(s)	793
NlaIII	CATG	4 cut(s)	319, 827, 940, 1078
NlaIV	GGNNCC	7 cut(s)	286, 389, 548, 656, 682, 817, 853
NmeAIII	GCCGAG	1 cut(s)	1050
NmuCI	GTSAC	3 cut(s)	472, 521, 806
OliI	CACNNNNGTG	1 cut(s)	1061
PaeR7I	CTCGAG	1 cut(s)	458
PagI	TCATGA	2 cut(s)	315, 936
PciSI	GCTCTTC	2 cut(s)	206, 254
PcsI	WCGNNNNNNNCGW	1 cut(s)	609
PdiI	GCCGGC	1 cut(s)	653
PfeI	GAWTC	7 cut(s)	44, 212, 402, 614, 845, 893, 1066
PflFI	GACNNNGTC	1 cut(s)	188
PkrI	GCNGC	7 cut(s)	9, 12, 24, 140, 395, 607, 966
PleI	GAGTC	4 cut(s)	53, 152, 343, 1123
PpsI	GAGTC	4 cut(s)	53, 152, 343, 1123
PpuMI	RGGWCCY	1 cut(s)	681
Psp124BI	GAGCTC	2 cut(s)	201, 357
Psp5II	RGGWCCY	1 cut(s)	681
Psp6I	CCWGG	2 cut(s)	126, 270
PspEI	GGTNACC	1 cut(s)	521
PspGI	CCWGG	2 cut(s)	126, 270
PspN4I	GGNNCC	7 cut(s)	286, 389, 548, 656, 682, 817, 853
PspPI	GGNCC	5 cut(s)	130, 238, 284, 591, 681
PspPPI	RGGWCCY	1 cut(s)	681
PspXI	VCTCGAGB	1 cut(s)	458
PsuI	RGATCY	1 cut(s)	851
PsyI	GACNNNGTC	1 cut(s)	188
RsaI	GTAC	1 cut(s)	1028
RsaNI	GTAC	1 cut(s)	1027
RseI	CAYNNNNRTG	1 cut(s)	1061
SacI	GAGCTC	2 cut(s)	201, 357
SalI	GTCGAC	1 cut(s)	569
SapI	GCTCTTC	2 cut(s)	206, 254
SaqAI	TTAA	2 cut(s)	452, 837
SatI	GCNGC	7 cut(s)	8, 11, 23, 139, 394, 606, 965
Sau3AI	GATC	5 cut(s)	84, 217, 468, 851, 869
Sau96I	GGNCC	5 cut(s)	130, 238, 284, 591, 681
SchI	GAGTC	4 cut(s)	53, 152, 344, 1123
ScrFI	CCNGG	5 cut(s)	128, 272, 340, 542, 543
SduI	GDGCHC	8 cut(s)	201, 357, 423, 542, 549, 639, 787, 818
SfaNI	GCATC	4 cut(s)	354, 472, 896, 1085
Sfr274I	CTCGAG	1 cut(s)	458
SinI	GGWCC	5 cut(s)	130, 238, 284, 591, 681
SlaI	CTCGAG	1 cut(s)	458
SmaI	CCCGGG	1 cut(s)	543
SmiMI	CAYNNNNRTG	1 cut(s)	1061
SmlI	CTYRAG	1 cut(s)	458
SmoI	CTYRAG	1 cut(s)	458
Sse9I	AATT	2 cut(s)	261, 1147
SspMI	CTAG	2 cut(s)	794, 906
SstI	GAGCTC	2 cut(s)	201, 357
StyD4I	CCNGG	5 cut(s)	126, 270, 338, 540, 541
StyI	CCWWGG	2 cut(s)	684, 855
TaaI	ACNGT	4 cut(s)	498, 764, 820, 1060
TaqI	TCGA	3 cut(s)	459, 570, 617
TaqII	GACCGA	1 cut(s)	414
TasI	AATT	2 cut(s)	261, 1147
TauI	GCSGC	3 cut(s)	13, 396, 608
TfiI	GAWTC	7 cut(s)	44, 212, 402, 614, 845, 893, 1066
Tru1I	TTAA	2 cut(s)	452, 837
Tru9I	TTAA	2 cut(s)	452, 837
TscAI	CASTG	2 cut(s)	889, 999
TseFI	GTSAC	3 cut(s)	472, 521, 806
TseI	GCWGC	4 cut(s)	7, 22, 138, 964
Tsp45I	GTSAC	3 cut(s)	472, 521, 806
TspDTI	ATGAA	5 cut(s)	705, 812, 912, 925, 953
TspGWI	ACGGA	3 cut(s)	136, 170, 1095
TspMI	CCCGGG	1 cut(s)	541
TspRI	CASTG	2 cut(s)	889, 999
Tth111I	GACNNNGTC	1 cut(s)	188
VneI	GTGCAC	1 cut(s)	783
VpaK11BI	GGWCC	5 cut(s)	130, 238, 284, 591, 681
XapI	RAATTY	1 cut(s)	261
XhoI	CTCGAG	1 cut(s)	458
XmaI	CCCGGG	1 cut(s)	541
XmiI	GTMKAC	2 cut(s)	174, 570
XspI	CTAG	2 cut(s)	794, 906

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.