Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0002802

Physical Location & Seq

Genomic Coordinates Forward (+)

8671185 .. 8675109

Gene Structure 3925 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g14150.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2352 bp

ATGGAACCTATGGTTCTGAACCTAACCAGCATGAGAACTTCTTCAGATGGAGCTTGGCAGGGTGATAATCCTCTGAACCATGCCTTCCCATTGTTGATAGTTCAAACCACCCTCGTCCTCTTCATCAGTCGCTTCTTTGCCTTCCTTCTCAAACCATTCTGCCAACCTAAAGTCATTGCCGAGATCTTAGGTGGGATTTTGCTAGGACCTTCTGCACTTGGCCGGATCAAAGATTTCTCCCACATTATCTTCCCTTCATGGAGTACTCCCATACTCGAATCAGTAGCAAGCATCGGCCTCCTCTTCTACCTATTCCTCGTGGGCCTCGAGCTTGACTTGAGCTCCATCCGCCGCAGTGGCAAAAGCGCCATCACCATAGCACTTGCAGGCATTTCCCTCCCTTTCCTTATCGCGGTAGGAGTCACATTCCTCATGCGCAAGGCCATCAACGGTGAGAACAAAGTAGGGTACCCTCAGTTCCTCATGTTCATGGGGGTAGCCCTCTCCATCACCGCCTTCCCTGTCCTCGCACGCATCTTAGCAGAGCTCAAATTGCTCACCACACGCATAGGTGAGACGGCAATGGCTGCGGCAGCGTTCAACGACGTGGCTGCATGGATCCTGCTGGCCTTGGCCGTGGCCTTAGCCGGTGGGAACCATGAAGGGCCTCTAGTATCTATTTGGGTTCTCATTTCAGGTGTGGCTTTTGTTGCTTTTATGTTCATTCTGGTCCGTCCTATGATGACTTGGGTTGCTAACCGCTGCTCATCTCAAATTGAGGACGAAGCTTATATATGCTTAACCCTAGCCGGGGTCATGCTTTCCGGGTTCATGACTGACCTAATCGGTGTCCATGCCATCTTCGGGGCATTTATTTTCGGTTTAATCATTCCGAAAGGAGGTGAATTCGCAGCCAAACTGACTAGGAGGATTGAGGATTTTGTATCTGGTTTGCTTCTGCCTCTCTACTTTGCTTCAAGTGGTTTGAAGACTGATGTTACTAAAATACATGGGATCAAGGCATGGGGTCTTCTGGCTCTGGTTATATCAGTTTCTTGCACTGGTAAAATTTTGGGAACGTTTTTAGTTGCAATGTTGTGTATGATACCAGTGAGGGAGTCATTAGCTCTAGGTGTGCTGATGAATACTAAAGGGTTGGTGGAGCTTATTGTTCTGAATATTGGCAAGGAGAAAAAGATTCTAAACGACGAGATGTTTGCTATTTTAGTGTTGATGGCAATTTTCACCACCTTCACGACAACACCAACAGTGATGGCCATTTACAATCCGTATGTCGTTGCTTCCCAATCTGAGAGTACTTTAGAGAGACAGAATTCTCCAAGCAAGAACTCGAAGAAACAGAAGGAACTTCGAGTCCTTGCTTGTATCCATGGACCAGGAAGTGTACCCTCCCTTATCAACCTCATCGAGTCGACCGGAACCTCCTCCGAGAACTCTGTTCTCAAAGTTTACGTGATGCATCTTGTCGAGCTCACTGATCGTTCTTCTTCCATTATGATGGTACACAAAGTTCGGAAGAATGGCTTGCCCTTCATCAACCGCTTTTGTCTAGGGGTGGCACAAGGCCATATCGCCTCCGCATTTGAAGCTTATGGTCAAGTCGGTCAAGTCACAATCCGGCACACAACAGCCATCTCCGGTTTGTCTACAATGCACGAGGATATTCTCCATGTTGCGGAAGCTAAGAGGGTGTCCATCGTTATCTTACCTTTCAACAAACAGTGGAACAAACAGGGTGAAGAGAAGATGGAAAATTTAGGGCATCGCTGGAAGGGAGTCAATGAGAGAGTTCTAAAATGTGCTAGTTGCTCAGTAGCTTTGTTCGTGGATCGTGGATATGGTGTTGGAGCTCATAAGGGTGCAAAGACCTCAAGCACTGCCAATCTGAAGAGGGTGTGCATTTTATTCCTGGGTGGACCTGATGACCGCCAGGCTCTGGAGTATGTTGGCGGACTGGCAAATCAAAGTGTCGTAGTTACTGTCGTGAGGTGTCTGGAACAGAACGCTACTCGTTTAAGCCCCACTACAAACCCAGAGAGGGAACTGGATGAGGCTGCAATGGCAGAGTTCCGAAGGCAGAATGGGTCAGCGGAATACATAGAGGTGATGGTCGACAACATTATAGACACGGTGGTGGGCATAGGCCAGAGCAAGGAATACGACCTGGTGATTGTGGGGAAGGAGCACCACCCTTCAACCATCGTTGCAGAATTGGCTCACAATCAGCTGGAGCATGATGAACTGGGACCAATTGGAGACACATTAGCTTCCTCCTCCCATGGGATTTTGTGCTCTGTGCTTGTGATACAAACACCAAAGACTAGCAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006605 GO:0006623 GO:0006810 GO:0006811 GO:0006812 GO:0006873 GO:0006875 GO:0006885 GO:0006886 GO:0007034 GO:0008104 GO:0008150 GO:0009987 GO:0012505 GO:0015031 GO:0015672 GO:0015833 GO:0019725 GO:0030003 GO:0030004 GO:0030007 GO:0030104 GO:0033036 GO:0033365 GO:0034613 GO:0042592 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045184 GO:0046907 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055065 GO:0055067 GO:0055075 GO:0055080 GO:0055082 GO:0065007 GO:0065008 GO:0070727 GO:0071702 GO:0071705 GO:0072594 GO:0072665 GO:0072666 GO:0098771

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Na_H_Exchanger

Protein Analysis

784

Amino Acids

84.9

Weight (kDa)

8.33

Isoelectric Point (pI)

37.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Na_H_Exchanger	PF00999	41 - 424	1e-60	Sodium/hydrogen exchanger, transmembrane
CHX17_2nd	PF23256	488 - 629	7e-35	Plant cation/H(+) antiporter domain
CHX17_C	PF23259	639 - 778	9.8e-12	Plant cation/H(+) antiporter, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002802)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G53720 AT3G53720
fragaria_vesca	FvH4_6g14141 FvH4_6g14141 FvH4_6g14150
malus_domestica	MD04G1124400.v1.1 MD04G1124500.v1.1 MD04G1124700.v1.1 MD12G1139700.v1.1
prunus_persica	Prupe.6G251600_v2.0.a1 Prupe.6G251700_v2.0.a1 Prupe.6G251700_v2.0.a1
pyrus_communis	pycom04g11220 pycom04g11230 pycom12g13420
rosa_chinensis	RchiOBHm_Chr3g0467061 RchiOBHm_Chr3g0467081 RchiOBHm_Chr3g0467091
rosa_laevigata	RLG00000024527 RLG00000024528 RLG00000024532
rosa_multiflora	Rmu_co8287377.1_g000001 Rmu_co8419643.1_g000001 Rmu_sc0012393.1_g000001 Rmu_ssc0000065.1_g000004
rosa_roxburghii	Rroxscaffold_6G00413900 Rroxscaffold_6G00413920
rosa_rugosa	Rorug03G0085100 Rorug03G0085400
rosa_samantha	Rh3AG133100 Rh3AG133400 Rh3BG154200 Rh3BG154600 Rh3CG154200 Rh3CG154300 Rh3DG155200 Rh3DG155400
rosa_wichuraiana	Rw3G012600 Rw3G012610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	437
Acc65I	GGTACC	1 cut(s)	468
AccB1I	GGYRCC	1 cut(s)	468
AccB7I	CCANNNNNTGG	1 cut(s)	1957
AccI	GTMKAC	3 cut(s)	1433, 1667, 2133
AccII	CGCG	1 cut(s)	413
AclI	AACGTT	1 cut(s)	1079
AclWI	GGATC	5 cut(s)	233, 613, 626, 1022, 1857
AcoI	YGGCCR	3 cut(s)	220, 633, 1275
AcsI	RAATTY	4 cut(s)	905, 1068, 1333, 1774
AcuI	CTGAAG	2 cut(s)	27, 1928
AfaI	GTAC	5 cut(s)	265, 470, 1318, 1407, 1524
AgsI	TTSAA	7 cut(s)	104, 601, 978, 988, 1607, 1735, 2217
AjiI	CACGTC	1 cut(s)	607
AjnI	CCWGG	4 cut(s)	1396, 1929, 1950, 2184
AleI	CACNNNNGTG	1 cut(s)	2153
AloI	GAACNNNNNNTCC	2 cut(s)	1359, 1391
Alw21I	GWGCWC	6 cut(s)	344, 549, 1494, 1873, 2208, 2315
Alw26I	GTCTC	3 cut(s)	569, 1321, 2271
AlwI	GGATC	5 cut(s)	233, 613, 626, 1022, 1857
AlwNI	CAGNNNCTG	1 cut(s)	1957
Ama87I	CYCGRG	1 cut(s)	326
ApeKI	GCWGC	6 cut(s)	587, 593, 611, 762, 911, 2075
ApoI	RAATTY	4 cut(s)	905, 1068, 1333, 1774
ArsI	GACNNNNNNTTYG	2 cut(s)	1199, 1231
Asp700I	GAANNNNTTC	1 cut(s)	40
Asp718I	GGTACC	1 cut(s)	468
AspLEI	GCGC	2 cut(s)	368, 438
AspS9I	GGNCC	7 cut(s)	206, 322, 665, 730, 1394, 1937, 2267
AsuC2I	CCSGG	2 cut(s)	811, 826
AvaI	CYCGRG	1 cut(s)	326
AvaII	GGWCC	5 cut(s)	206, 730, 1394, 1937, 2267
BalI	TGGCCA	1 cut(s)	1277
BamHI	GGATCC	1 cut(s)	618
BanI	GGYRCC	1 cut(s)	468
BanII	GRGCYC	4 cut(s)	344, 549, 1494, 1873
BauI	CACGAG	2 cut(s)	317, 1676
BbsI	GAAGAC	2 cut(s)	995, 1022
Bbv12I	GWGCWC	6 cut(s)	344, 549, 1494, 1873, 2208, 2315
BbvI	GCAGC	6 cut(s)	574, 598, 605, 749, 923, 2062
BceAI	ACGGC	2 cut(s)	594, 620
BcgI	CGANNNNNNTGC	4 cut(s)	593, 627, 1199, 1233
BciT130I	CCWGG	4 cut(s)	1398, 1931, 1952, 2186
BciVI	GTATCC	1 cut(s)	1397
BcnI	CCSGG	2 cut(s)	811, 826
BcoDI	GTCTC	3 cut(s)	569, 1321, 2271
BfaI	CTAG	8 cut(s)	203, 671, 806, 924, 1130, 1571, 1824, 2343
BfoI	RGCGCY	1 cut(s)	369
BfuI	GTATCC	1 cut(s)	1397
BglI	GCCNNNNNGGC	1 cut(s)	357
BglII	AGATCT	1 cut(s)	183
BisI	GCNGC	8 cut(s)	352, 588, 591, 594, 612, 763, 912, 2076
BlsI	GCNGC	8 cut(s)	353, 589, 592, 595, 613, 764, 913, 2077
BmcAI	AGTACT	2 cut(s)	265, 1318
Bme1390I	CCNGG	6 cut(s)	811, 826, 1398, 1931, 1952, 2186
Bme18I	GGWCC	5 cut(s)	206, 730, 1394, 1937, 2267
BmeT110I	CYCGRG	1 cut(s)	326
BmgBI	CACGTC	1 cut(s)	607
BmgT120I	GGNCC	7 cut(s)	206, 322, 665, 730, 1394, 1937, 2267
BmiI	GGNNCC	6 cut(s)	6, 470, 620, 656, 1441, 2268
BmrFI	CCNGG	6 cut(s)	811, 826, 1398, 1931, 1952, 2186
BmrI	ACTGGG	1 cut(s)	2273
BmsI	GCATC	5 cut(s)	300, 543, 1467, 1489, 1792
BmuI	ACTGGG	1 cut(s)	2273
BpiI	GAAGAC	2 cut(s)	995, 1022
BpmI	CTGGAG	2 cut(s)	1979, 2270
Bpu10I	CCTNAGC	1 cut(s)	643
BpuEI	CTTGAG	2 cut(s)	358, 1876
BpuMI	CCSGG	2 cut(s)	811, 826
BsaAI	YACGTR	1 cut(s)	1474
BsaJI	CCNNGG	6 cut(s)	630, 636, 810, 1390, 1930, 2299
BsaWI	WCCGGW	2 cut(s)	1436, 1658
BsaXI	ACNNNNNCTCC	2 cut(s)	326, 356
Bse118I	RCCGGY	1 cut(s)	647
Bse1I	ACTGG	5 cut(s)	1066, 1109, 1980, 2070, 2268
Bse3DI	GCAATG	4 cut(s)	174, 588, 1098, 2085
BseBI	CCWGG	4 cut(s)	1398, 1931, 1952, 2186
BseDI	CCNNGG	6 cut(s)	630, 636, 810, 1390, 1930, 2299
BseGI	GGATG	2 cut(s)	345, 2074
BseMI	GCAATG	4 cut(s)	174, 588, 1098, 2085
BseMII	CTCAG	3 cut(s)	488, 1302, 1845
BseNI	ACTGG	5 cut(s)	1066, 1109, 1980, 2070, 2268
BseRI	GAGGAG	3 cut(s)	290, 1435, 2284
BseXI	GCAGC	6 cut(s)	574, 598, 605, 749, 923, 2062
BsgI	GTGCAG	1 cut(s)	198
Bsh1236I	CGCG	1 cut(s)	413
Bsh1285I	CGRYCG	1 cut(s)	1437
BshNI	GGYRCC	1 cut(s)	468
BsiEI	CGRYCG	1 cut(s)	1437
BsiHKAI	GWGCWC	6 cut(s)	344, 549, 1494, 1873, 2208, 2315
BsiHKCI	CYCGRG	1 cut(s)	326
BsiSI	CCGG	7 cut(s)	223, 648, 810, 825, 1437, 1639, 1659
BslFI	GGGAC	1 cut(s)	2280
BsmAI	GTCTC	3 cut(s)	569, 1321, 2271
BsmBI	CGTCTC	1 cut(s)	569
BsmFI	GGGAC	1 cut(s)	2280
BsoBI	CYCGRG	1 cut(s)	326
Bsp1286I	GDGCHC	6 cut(s)	344, 549, 1494, 1873, 2208, 2315
Bsp143I	GATC	6 cut(s)	183, 225, 618, 1014, 1498, 1849
Bsp19I	CCATGG	2 cut(s)	1390, 2299
BspCNI	CTCAG	3 cut(s)	487, 1303, 1844
BspFNI	CGCG	1 cut(s)	413
BspHI	TCATGA	1 cut(s)	831
BspLI	GGNNCC	6 cut(s)	6, 470, 620, 656, 1441, 2268
BspPI	GGATC	5 cut(s)	233, 613, 626, 1022, 1857
BspT107I	GGYRCC	1 cut(s)	468
BsrDI	GCAATG	4 cut(s)	174, 588, 1098, 2085
BsrFI	RCCGGY	1 cut(s)	647
BsrI	ACTGG	5 cut(s)	1066, 1109, 1980, 2070, 2268
BssAI	RCCGGY	1 cut(s)	647
BssECI	CCNNGG	6 cut(s)	630, 636, 810, 1390, 1930, 2299
BssMI	GATC	6 cut(s)	183, 225, 618, 1014, 1498, 1849
BssSI	CACGAG	2 cut(s)	317, 1676
BssT1I	CCWWGG	3 cut(s)	630, 1390, 2299
Bst2BI	CACGAG	2 cut(s)	317, 1676
Bst2UI	CCWGG	4 cut(s)	1398, 1931, 1952, 2186
Bst4CI	ACNGT	5 cut(s)	452, 1270, 1743, 2002, 2152
Bst6I	CTCTTC	4 cut(s)	125, 308, 1755, 1904
BstAPI	GCANNNNNTGC	1 cut(s)	587
BstBAI	YACGTR	1 cut(s)	1474
BstC8I	GCNNGC	5 cut(s)	289, 388, 532, 627, 1547
BstDEI	CTNAG	7 cut(s)	187, 474, 538, 643, 1311, 1704, 1831
BstDSI	CCRYGG	3 cut(s)	636, 1390, 2299
BstF5I	GGATG	2 cut(s)	345, 2074
BstFNI	CGCG	1 cut(s)	413
BstH2I	RGCGCY	1 cut(s)	369
BstHHI	GCGC	2 cut(s)	368, 438
BstKTI	GATC	6 cut(s)	186, 228, 621, 1017, 1501, 1852
BstMAI	GTCTC	3 cut(s)	569, 1321, 2271
BstMBI	GATC	6 cut(s)	183, 225, 618, 1014, 1498, 1849
BstMCI	CGRYCG	1 cut(s)	1437
BstMWI	GCNNNNNNNGC	9 cut(s)	348, 357, 553, 587, 593, 710, 1607, 2081, 2234
BstNI	CCWGG	4 cut(s)	1398, 1931, 1952, 2186
BstSCI	CCNGG	6 cut(s)	809, 824, 1396, 1929, 1950, 2184
BstUI	CGCG	1 cut(s)	413
BstV1I	GCAGC	6 cut(s)	574, 598, 605, 749, 923, 2062
BstV2I	GAAGAC	2 cut(s)	995, 1022
BstX2I	RGATCY	2 cut(s)	183, 618
BstXI	CCANNNNNNTGG	1 cut(s)	1519
BstYI	RGATCY	2 cut(s)	183, 618
BsuI	GTATCC	1 cut(s)	1397
BtgI	CCRYGG	3 cut(s)	636, 1390, 2299
BtgZI	GCGATG	1 cut(s)	1769
BtrI	CACGTC	1 cut(s)	607
BtsCI	GGATG	2 cut(s)	345, 2074
BtsI	GCAGTG	2 cut(s)	361, 1896
BtsIMutI	CAGTG	7 cut(s)	361, 1059, 1116, 1275, 1494, 1748, 1896
Cac8I	GCNNGC	5 cut(s)	289, 388, 532, 627, 1547
CaiI	CAGNNNCTG	1 cut(s)	1957
CciI	TCATGA	1 cut(s)	831
CfoI	GCGC	2 cut(s)	368, 438
Cfr10I	RCCGGY	1 cut(s)	647
Cfr13I	GGNCC	7 cut(s)	206, 322, 665, 730, 1394, 1937, 2267
CsiI	ACCWGGT	1 cut(s)	2184
Csp6I	GTAC	5 cut(s)	264, 469, 1317, 1406, 1523
CviQI	GTAC	5 cut(s)	264, 469, 1317, 1406, 1523
DdeI	CTNAG	7 cut(s)	187, 474, 538, 643, 1311, 1704, 1831
DpnI	GATC	6 cut(s)	185, 227, 620, 1016, 1500, 1851
DpnII	GATC	6 cut(s)	183, 225, 618, 1014, 1498, 1849
EaeI	YGGCCR	3 cut(s)	220, 633, 1275
Eam1104I	CTCTTC	4 cut(s)	125, 308, 1755, 1904
EarI	CTCTTC	4 cut(s)	125, 308, 1755, 1904
EciI	GGCGGA	2 cut(s)	338, 1986
Ecl136II	GAGCTC	4 cut(s)	342, 547, 1492, 1871
Eco130I	CCWWGG	3 cut(s)	630, 1390, 2299
Eco24I	GRGCYC	4 cut(s)	344, 549, 1494, 1873
Eco47I	GGWCC	5 cut(s)	206, 730, 1394, 1937, 2267
Eco53kI	GAGCTC	4 cut(s)	342, 547, 1492, 1871
Eco57I	CTGAAG	2 cut(s)	27, 1928
Eco88I	CYCGRG	1 cut(s)	326
EcoICRI	GAGCTC	4 cut(s)	342, 547, 1492, 1871
EcoO109I	RGGNCCY	2 cut(s)	206, 665
EcoRI	GAATTC	2 cut(s)	905, 1333
EcoRII	CCWGG	4 cut(s)	1396, 1929, 1950, 2184
EcoT14I	CCWWGG	3 cut(s)	630, 1390, 2299
EcoT22I	ATGCAT	1 cut(s)	1482
EcoT38I	GRGCYC	4 cut(s)	344, 549, 1494, 1873
ErhI	CCWWGG	3 cut(s)	630, 1390, 2299
Esp3I	CGTCTC	1 cut(s)	569
FalI	AAGNNNNNCTT	2 cut(s)	1529, 1561
FaqI	GGGAC	1 cut(s)	2280
FblI	GTMKAC	3 cut(s)	1433, 1667, 2133
Fnu4HI	GCNGC	8 cut(s)	352, 588, 591, 594, 612, 763, 912, 2076
FokI	GGATG	2 cut(s)	332, 2081
FriOI	GRGCYC	4 cut(s)	344, 549, 1494, 1873
Fsp4HI	GCNGC	8 cut(s)	352, 588, 591, 594, 612, 763, 912, 2076
FspBI	CTAG	8 cut(s)	203, 671, 806, 924, 1130, 1571, 1824, 2343
FspI	TGCGCA	1 cut(s)	437
GlaI	GCGC	2 cut(s)	367, 437
GluI	GCNGC	8 cut(s)	352, 588, 591, 594, 612, 763, 912, 2076
GsuI	CTGGAG	2 cut(s)	1979, 2270
HaeII	RGCGCY	1 cut(s)	369
HapII	CCGG	7 cut(s)	223, 648, 810, 825, 1437, 1639, 1659
HhaI	GCGC	2 cut(s)	368, 438
Hin6I	GCGC	2 cut(s)	366, 436
HinP1I	GCGC	2 cut(s)	366, 436
HincII	GTYRAC	2 cut(s)	1434, 2134
HindII	GTYRAC	2 cut(s)	1434, 2134
HindIII	AAGCTT	2 cut(s)	786, 1608
HinfI	GANTC	7 cut(s)	278, 420, 1118, 1198, 1374, 1430, 1797
HpaII	CCGG	7 cut(s)	223, 648, 810, 825, 1437, 1639, 1659
Hpy166II	GTNNAC	7 cut(s)	1406, 1434, 1471, 1525, 1668, 1937, 2134
Hpy188III	TCNNGA	5 cut(s)	832, 1255, 1958, 2005, 2015
Hpy8I	GTNNAC	7 cut(s)	1406, 1434, 1471, 1525, 1668, 1937, 2134
Hpy99I	CGWCG	2 cut(s)	608, 1211
HpyCH4III	ACNGT	5 cut(s)	452, 1270, 1743, 2002, 2152
HpyCH4IV	ACGT	3 cut(s)	606, 1079, 1473
HpyF10VI	GCNNNNNNNGC	9 cut(s)	348, 357, 553, 587, 593, 710, 1607, 2081, 2234
HpyF3I	CTNAG	7 cut(s)	187, 474, 538, 643, 1311, 1704, 1831
HpySE526I	ACGT	3 cut(s)	606, 1079, 1473
HspAI	GCGC	2 cut(s)	366, 436
KpnI	GGTACC	1 cut(s)	472
Kzo9I	GATC	6 cut(s)	183, 225, 618, 1014, 1498, 1849
LmnI	GCTCC	6 cut(s)	50, 347, 1162, 1868, 2203, 2251
Lsp1109I	GCAGC	6 cut(s)	574, 598, 605, 749, 923, 2062
LweI	GCATC	5 cut(s)	300, 543, 1467, 1489, 1792
MabI	ACCWGGT	1 cut(s)	2184
MaeI	CTAG	8 cut(s)	203, 671, 806, 924, 1130, 1571, 1824, 2343
MaeII	ACGT	3 cut(s)	606, 1079, 1473
MaeIII	GTNAC	4 cut(s)	421, 997, 1630, 1996
MalI	GATC	6 cut(s)	185, 227, 620, 1016, 1500, 1851
MboI	GATC	6 cut(s)	183, 225, 618, 1014, 1498, 1849
MfeI	CAATTG	1 cut(s)	2271
MflI	RGATCY	2 cut(s)	183, 618
MhlI	GDGCHC	6 cut(s)	344, 549, 1494, 1873, 2208, 2315
MlsI	TGGCCA	1 cut(s)	1277
MluCI	AATT	9 cut(s)	551, 774, 905, 1068, 1239, 1333, 1774, 2231, 2271
MluNI	TGGCCA	1 cut(s)	1277
MlyI	GAGTC	5 cut(s)	429, 1127, 1383, 1439, 1806
MmeI	TCCRAC	1 cut(s)	1846
Mox20I	TGGCCA	1 cut(s)	1277
Mph1103I	ATGCAT	1 cut(s)	1482
MroXI	GAANNNNTTC	1 cut(s)	40
MscI	TGGCCA	1 cut(s)	1277
MseI	TTAA	3 cut(s)	800, 884, 2036
MslI	CAYNNNNRTG	5 cut(s)	488, 1517, 1878, 2123, 2153
Msp20I	TGGCCA	1 cut(s)	1277
MspA1I	CMGCKG	3 cut(s)	762, 2111, 2248
MspI	CCGG	7 cut(s)	223, 648, 810, 825, 1437, 1639, 1659
MspR9I	CCNGG	6 cut(s)	811, 826, 1398, 1931, 1952, 2186
MunI	CAATTG	1 cut(s)	2271
MvaI	CCWGG	4 cut(s)	1398, 1931, 1952, 2186
MvnI	CGCG	1 cut(s)	413
MwoI	GCNNNNNNNGC	9 cut(s)	348, 357, 553, 587, 593, 710, 1607, 2081, 2234
NciI	CCSGG	2 cut(s)	811, 826
NcoI	CCATGG	2 cut(s)	1390, 2299
NdeII	GATC	6 cut(s)	183, 225, 618, 1014, 1498, 1849
NlaIV	GGNNCC	6 cut(s)	6, 470, 620, 656, 1441, 2268
NmeAIII	GCCGAG	1 cut(s)	205
NmuCI	GTSAC	2 cut(s)	421, 1630
NsbI	TGCGCA	1 cut(s)	437
NsiI	ATGCAT	1 cut(s)	1482
OliI	CACNNNNGTG	1 cut(s)	2153
PaeR7I	CTCGAG	1 cut(s)	326
PagI	TCATGA	1 cut(s)	831
PcsI	WCGNNNNNNNCGW	1 cut(s)	324
PdmI	GAANNNNTTC	1 cut(s)	40
PfeI	GAWTC	2 cut(s)	278, 1198
PflMI	CCANNNNNTGG	1 cut(s)	1957
PkrI	GCNGC	8 cut(s)	353, 589, 592, 595, 613, 764, 913, 2077
PleI	GAGTC	5 cut(s)	428, 1126, 1382, 1438, 1805
PpsI	GAGTC	5 cut(s)	428, 1126, 1382, 1438, 1805
Ppu21I	YACGTR	1 cut(s)	1474
PpuMI	RGGWCCY	1 cut(s)	206
Psp124BI	GAGCTC	4 cut(s)	344, 549, 1494, 1873
Psp1406I	AACGTT	1 cut(s)	1079
Psp5II	RGGWCCY	1 cut(s)	206
Psp6I	CCWGG	4 cut(s)	1396, 1929, 1950, 2184
PspGI	CCWGG	4 cut(s)	1396, 1929, 1950, 2184
PspN4I	GGNNCC	6 cut(s)	6, 470, 620, 656, 1441, 2268
PspPI	GGNCC	7 cut(s)	206, 322, 665, 730, 1394, 1937, 2267
PspPPI	RGGWCCY	1 cut(s)	206
PspXI	VCTCGAGB	1 cut(s)	326
PsrI	GAACNNNNNNTAC	4 cut(s)	461, 493, 1515, 1547
PstNI	CAGNNNCTG	1 cut(s)	1957
PsuI	RGATCY	2 cut(s)	183, 618
PvuII	CAGCTG	1 cut(s)	2248
RsaI	GTAC	5 cut(s)	265, 470, 1318, 1407, 1524
RsaNI	GTAC	5 cut(s)	264, 469, 1317, 1406, 1523
RseI	CAYNNNNRTG	5 cut(s)	488, 1517, 1878, 2123, 2153
SacI	GAGCTC	4 cut(s)	344, 549, 1494, 1873
SalI	GTCGAC	2 cut(s)	1432, 2132
SaqAI	TTAA	3 cut(s)	800, 884, 2036
SatI	GCNGC	8 cut(s)	352, 588, 591, 594, 612, 763, 912, 2076
Sau3AI	GATC	6 cut(s)	183, 225, 618, 1014, 1498, 1849
Sau96I	GGNCC	7 cut(s)	206, 322, 665, 730, 1394, 1937, 2267
ScaI	AGTACT	2 cut(s)	265, 1318
SchI	GAGTC	5 cut(s)	429, 1127, 1383, 1439, 1806
ScrFI	CCNGG	6 cut(s)	811, 826, 1398, 1931, 1952, 2186
SduI	GDGCHC	6 cut(s)	344, 549, 1494, 1873, 2208, 2315
SexAI	ACCWGGT	1 cut(s)	2184
SfaNI	GCATC	5 cut(s)	300, 543, 1467, 1489, 1792
Sfr274I	CTCGAG	1 cut(s)	326
SinI	GGWCC	5 cut(s)	206, 730, 1394, 1937, 2267
SlaI	CTCGAG	1 cut(s)	326
SmiMI	CAYNNNNRTG	5 cut(s)	488, 1517, 1878, 2123, 2153
SmlI	CTYRAG	3 cut(s)	326, 337, 1891
SmoI	CTYRAG	3 cut(s)	326, 337, 1891
Sse9I	AATT	9 cut(s)	551, 774, 905, 1068, 1239, 1333, 1774, 2231, 2271
SspI	AATATT	1 cut(s)	1180
SspMI	CTAG	8 cut(s)	203, 671, 806, 924, 1130, 1571, 1824, 2343
SstI	GAGCTC	4 cut(s)	344, 549, 1494, 1873
StyD4I	CCNGG	6 cut(s)	809, 824, 1396, 1929, 1950, 2184
StyI	CCWWGG	3 cut(s)	630, 1390, 2299
TaaI	ACNGT	5 cut(s)	452, 1270, 1743, 2002, 2152
TaiI	ACGT	3 cut(s)	609, 1082, 1476
TaqI	TCGA	8 cut(s)	276, 327, 1352, 1372, 1428, 1433, 1488, 2133
TaqII	GACCGA	1 cut(s)	1613
TasI	AATT	9 cut(s)	551, 774, 905, 1068, 1239, 1333, 1774, 2231, 2271
TatI	WGTACW	2 cut(s)	263, 1316
TauI	GCSGC	2 cut(s)	354, 593
TfiI	GAWTC	2 cut(s)	278, 1198
Tru1I	TTAA	3 cut(s)	800, 884, 2036
Tru9I	TTAA	3 cut(s)	800, 884, 2036
TscAI	CASTG	7 cut(s)	361, 1066, 1116, 1275, 1501, 1748, 1903
TseFI	GTSAC	2 cut(s)	421, 1630
TseI	GCWGC	6 cut(s)	587, 593, 611, 762, 911, 2075
Tsp45I	GTSAC	2 cut(s)	421, 1630
TspDTI	ATGAA	9 cut(s)	112, 246, 478, 675, 712, 820, 1157, 1543, 2274
TspGWI	ACGGA	2 cut(s)	722, 1278
TspRI	CASTG	7 cut(s)	361, 1066, 1116, 1275, 1501, 1748, 1903
Van91I	CCANNNNNTGG	1 cut(s)	1957
VpaK11BI	GGWCC	5 cut(s)	206, 730, 1394, 1937, 2267
XapI	RAATTY	4 cut(s)	905, 1068, 1333, 1774
XhoI	CTCGAG	1 cut(s)	326
XmiI	GTMKAC	3 cut(s)	1433, 1667, 2133
XmnI	GAANNNNTTC	1 cut(s)	40
XspI	CTAG	8 cut(s)	203, 671, 806, 924, 1130, 1571, 1824, 2343
ZrmI	AGTACT	2 cut(s)	265, 1318
Zsp2I	ATGCAT	1 cut(s)	1482

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.