Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr04

Orthogroup ID

OG0002802

Physical Location & Seq

Genomic Coordinates Reverse (-)

21111056 .. 21112896

Gene Structure 1841 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD04G1124500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1260 bp

ATGGCACTCTTTACCACCTTTATCACAAGTCCACTAGTGATGGCCATTTACAAGCCTGCACGTGGCGTCTCAGTTCGCACTCATCGCAAGCTCCGTGATCTGTCAACCACTGTATCCTTCAAGGACGAACTTCGAGTCCTGGCGTGTGTCCATGGGCCTGCCAATGTGCCCTCACTCATTAGCCTCATTGAGTCCATCCGAAGTGCCAAGAAAGCGCAACTCAAACTCTTCCTCATGCGCCTTGTGGAGCTCACGGAGCGATCTTCTTCCATCATCATGGTCCAACGGGCTCGAAAGAACGGCTTTCCCTTCTTTAATAGATTCGGCCGAGGTGCCTGGAGCGACGGCGTTGTTTCCGCCTTCCAGGCCTATAGCCAACTGGGGCGAGTCTCGGTCCGACCCACAACTGCAATATCACCCATGTCCACAATGTACGAGGATGTTTGCCATACGGCGGAAGACCAGAGGGTGGCGATGATCATCTTGCCATTCCACAAACAATGGAGGCGAGACGGCGATAATCATGAAGCGACGGAGATTGTGAGCCAGGCCTGGCGAGGGGTCAACCAGAGGGTGCTTCAAACTGCACCGTGCTCAGTTGCAGTGCTCGTGGATCGTGGATTTGCTAACACCAGAACCCAGCGGATTTGCATTGTGTTTTTCGGTGGGCCCGATGATCGGGAGGCCTTGGAGTTAGGCGGTAGGATGGCCGAACACCCGACAATTAAAGTGACGGTTGTGAAATTTGTTGAGAAAGAGGGTTTGGAGAGTAATGGTCTCATGTTAAAGCCTTCTCCCTCCGAGTCTACCGAGAATAGCTATAGTTTCTCCACAGCTAAAATGGACCGAAAGAAAGAAAAGGAACTGGATGAGGAAGCAGTGGCTGAGTTCAGAAGCAAGTGGGATGGGAAAGCAGAGTGCGTAGAGAAGGTGGCAGCCAATAATATTGTGGAGGGGGTTTTGGCGATAGGAAGTAGTGGAGATCATGATCTGTTAATTGTAGGCAAAGGAAGATTCCCGTCACGCATGGTAGCAGAACTTGCCGACCGCCATGCAGAGCATGCAGAGTTAGGCCCCATTGGAGACATATTGGCTTCATCAGGCCATGGTGTGGTCTCATCAGTGCTTGTGATTCAACAACATGACGTAGCTCATTCCGTGGAGGCTCCAGTGTCGAAGGTTGTGCATGGTGATTACGAAGGGTTCGTCGCAGATGAGTCCTCCAGTACTGTGCTTGAGATGTCTAAGGAATCTGTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006605 GO:0006623 GO:0006810 GO:0006811 GO:0006812 GO:0006873 GO:0006875 GO:0006885 GO:0006886 GO:0007034 GO:0008104 GO:0008150 GO:0009987 GO:0012505 GO:0015031 GO:0015672 GO:0015833 GO:0019725 GO:0030003 GO:0030004 GO:0030007 GO:0030104 GO:0033036 GO:0033365 GO:0034613 GO:0042592 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045184 GO:0046907 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055065 GO:0055067 GO:0055075 GO:0055080 GO:0055082 GO:0065007 GO:0065008 GO:0070727 GO:0071702 GO:0071705 GO:0072594 GO:0072665 GO:0072666 GO:0098771

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Na_H_Exchanger

Protein Analysis

420

Amino Acids

46.1

Weight (kDa)

6.91

Isoelectric Point (pI)

39.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CHX17_2nd	PF23256	73 - 209	2.1e-36	Plant cation/H(+) antiporter domain
CHX17_C	PF23259	216 - 381	1.2e-13	Plant cation/H(+) antiporter, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002802)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G53720 AT3G53720
fragaria_vesca	FvH4_6g14141 FvH4_6g14141 FvH4_6g14150
malus_domestica	MD04G1124400.v1.1 MD04G1124500.v1.1 MD04G1124700.v1.1 MD12G1139700.v1.1
prunus_persica	Prupe.6G251600_v2.0.a1 Prupe.6G251700_v2.0.a1 Prupe.6G251700_v2.0.a1
pyrus_communis	pycom04g11220 pycom04g11230 pycom12g13420
rosa_chinensis	RchiOBHm_Chr3g0467061 RchiOBHm_Chr3g0467081 RchiOBHm_Chr3g0467091
rosa_laevigata	RLG00000024527 RLG00000024528 RLG00000024532
rosa_multiflora	Rmu_co8287377.1_g000001 Rmu_co8419643.1_g000001 Rmu_sc0012393.1_g000001 Rmu_ssc0000065.1_g000004
rosa_roxburghii	Rroxscaffold_6G00413900 Rroxscaffold_6G00413920
rosa_rugosa	Rorug03G0085100 Rorug03G0085400
rosa_samantha	Rh3AG133100 Rh3AG133400 Rh3BG154200 Rh3BG154600 Rh3CG154200 Rh3CG154300 Rh3DG155200 Rh3DG155400
rosa_wichuraiana	Rw3G012600 Rw3G012610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	332
AccB7I	CCANNNNNTGG	2 cut(s)	469, 1111
AccI	GTMKAC	1 cut(s)	806
AciI	CCGC	5 cut(s)	357, 455, 643, 699, 1048
AclWI	GGATC	1 cut(s)	621
AcoI	YGGCCR	3 cut(s)	42, 325, 708
AcsI	RAATTY	1 cut(s)	743
AcvI	CACGTG	1 cut(s)	62
AcyI	GRCGYC	1 cut(s)	66
AfaI	GTAC	2 cut(s)	434, 1228
AfiI	CCNNNNNNNGG	6 cut(s)	62, 454, 469, 558, 678, 1111
AgsI	TTSAA	3 cut(s)	121, 581, 1136
AhlI	ACTAGT	1 cut(s)	34
AjnI	CCWGG	5 cut(s)	138, 335, 363, 546, 551
AjuI	GAANNNNNNNTTGG	2 cut(s)	746, 778
AloI	GAACNNNNNNTCC	2 cut(s)	120, 152
AluBI	AGCT	5 cut(s)	91, 250, 819, 836, 1151
AluI	AGCT	5 cut(s)	91, 250, 819, 836, 1151
Alw21I	GWGCWC	3 cut(s)	252, 596, 609
Alw26I	GTCTC	6 cut(s)	73, 394, 504, 782, 1077, 1120
AlwI	GGATC	1 cut(s)	621
AlwNI	CAGNNNCTG	1 cut(s)	884
ApaI	GGGCCC	1 cut(s)	672
ApeKI	GCWGC	1 cut(s)	935
ApoI	RAATTY	1 cut(s)	743
ArsI	GACNNNNNNTTYG	4 cut(s)	120, 152, 1191, 1223
AspLEI	GCGC	2 cut(s)	217, 240
AspS9I	GGNCC	7 cut(s)	155, 280, 394, 668, 669, 844, 1073
AsuHPI	GGTGA	2 cut(s)	408, 1202
AvaII	GGWCC	3 cut(s)	280, 394, 844
BaeGI	GKGCMC	2 cut(s)	171, 672
BaeI	ACNNNNGTAYC	2 cut(s)	96, 129
BalI	TGGCCA	1 cut(s)	44
BanI	GGYRCC	1 cut(s)	332
BanII	GRGCYC	3 cut(s)	252, 292, 672
BauI	CACGAG	1 cut(s)	608
BbrPI	CACGTG	1 cut(s)	62
BbsI	GAAGAC	1 cut(s)	465
Bbv12I	GWGCWC	3 cut(s)	252, 596, 609
BbvI	GCAGC	1 cut(s)	947
BccI	CCATC	5 cut(s)	34, 203, 278, 700, 899
BceAI	ACGGC	4 cut(s)	316, 361, 468, 529
BcgI	CGANNNNNNTGC	4 cut(s)	1034, 1068, 1165, 1199
BciT130I	CCWGG	5 cut(s)	140, 337, 365, 548, 553
BciVI	GTATCC	1 cut(s)	124
BclI	TGATCA	1 cut(s)	477
BcoDI	GTCTC	6 cut(s)	73, 394, 504, 782, 1077, 1120
BcuI	ACTAGT	1 cut(s)	34
BfaI	CTAG	1 cut(s)	35
BfmI	CTRYAG	2 cut(s)	370, 820
BfuI	GTATCC	1 cut(s)	124
BglI	GCCNNNNNGGC	1 cut(s)	365
BisI	GCNGC	1 cut(s)	936
BlsI	GCNGC	1 cut(s)	937
BmcAI	AGTACT	1 cut(s)	1228
Bme1390I	CCNGG	5 cut(s)	140, 337, 365, 548, 553
Bme18I	GGWCC	3 cut(s)	280, 394, 844
BmgT120I	GGNCC	7 cut(s)	155, 280, 394, 668, 669, 844, 1073
BmiI	GGNNCC	4 cut(s)	334, 670, 1075, 1167
BmrFI	CCNGG	5 cut(s)	140, 337, 365, 548, 553
BmrI	ACTGGG	1 cut(s)	389
BmuI	ACTGGG	1 cut(s)	389
BpiI	GAAGAC	1 cut(s)	465
BpmI	CTGGAG	3 cut(s)	358, 1152, 1207
BpuEI	CTTGAG	1 cut(s)	1256
BsaAI	YACGTR	1 cut(s)	62
BsaBI	GATNNNNATC	2 cut(s)	479, 987
BsaHI	GRCGYC	1 cut(s)	66
BsaI	GGTCTC	2 cut(s)	782, 1120
BsaJI	CCNNGG	5 cut(s)	151, 328, 687, 1105, 1158
Bsc4I	CCNNNNNNNGG	6 cut(s)	62, 454, 469, 558, 678, 1111
Bse1I	ACTGG	4 cut(s)	384, 870, 1169, 1224
Bse8I	GATNNNNATC	2 cut(s)	479, 987
BseBI	CCWGG	5 cut(s)	140, 337, 365, 548, 553
BseDI	CCNNGG	5 cut(s)	151, 328, 687, 1105, 1158
BseGI	GGATG	5 cut(s)	195, 445, 711, 874, 910
BseJI	GATNNNNATC	2 cut(s)	479, 987
BseLI	CCNNNNNNNGG	6 cut(s)	62, 454, 469, 558, 678, 1111
BseMII	CTCAG	3 cut(s)	84, 609, 876
BseNI	ACTGG	4 cut(s)	384, 870, 1169, 1224
BseSI	GKGCMC	2 cut(s)	171, 672
BseX3I	CGGCCG	1 cut(s)	325
BseXI	GCAGC	1 cut(s)	947
BseYI	CCCAGC	1 cut(s)	639
BsgI	GTGCAG	2 cut(s)	42, 570
Bsh1285I	CGRYCG	2 cut(s)	328, 1048
BshNI	GGYRCC	1 cut(s)	332
BsiEI	CGRYCG	2 cut(s)	328, 1048
BsiHKAI	GWGCWC	3 cut(s)	252, 596, 609
BslI	CCNNNNNNNGG	6 cut(s)	62, 454, 469, 558, 678, 1111
BsmAI	GTCTC	6 cut(s)	73, 394, 504, 782, 1077, 1120
BsmBI	CGTCTC	2 cut(s)	73, 504
Bso31I	GGTCTC	2 cut(s)	782, 1120
Bsp120I	GGGCCC	1 cut(s)	668
Bsp1286I	GDGCHC	6 cut(s)	171, 252, 292, 596, 609, 672
Bsp143I	GATC	7 cut(s)	97, 260, 477, 613, 676, 982, 988
Bsp19I	CCATGG	2 cut(s)	151, 1105
BspACI	CCGC	5 cut(s)	357, 455, 643, 699, 1048
BspCNI	CTCAG	3 cut(s)	83, 608, 877
BspHI	TCATGA	2 cut(s)	523, 985
BspLI	GGNNCC	4 cut(s)	334, 670, 1075, 1167
BspPI	GGATC	1 cut(s)	621
BspT107I	GGYRCC	1 cut(s)	332
BspTNI	GGTCTC	2 cut(s)	782, 1120
BsrI	ACTGG	4 cut(s)	384, 870, 1169, 1224
BssECI	CCNNGG	5 cut(s)	151, 328, 687, 1105, 1158
BssMI	GATC	7 cut(s)	97, 260, 477, 613, 676, 982, 988
BssNI	GRCGYC	1 cut(s)	66
BssSI	CACGAG	1 cut(s)	608
BssT1I	CCWWGG	3 cut(s)	151, 687, 1105
Bst2BI	CACGAG	1 cut(s)	608
Bst2UI	CCWGG	5 cut(s)	140, 337, 365, 548, 553
Bst4CI	ACNGT	4 cut(s)	112, 591, 736, 1231
Bst6I	CTCTTC	1 cut(s)	233
BstACI	GRCGYC	1 cut(s)	66
BstAPI	GCANNNNNTGC	2 cut(s)	1040, 1061
BstBAI	YACGTR	1 cut(s)	62
BstC8I	GCNNGC	4 cut(s)	57, 89, 159, 1062
BstDEI	CTNAG	4 cut(s)	70, 595, 885, 1245
BstDSI	CCRYGG	3 cut(s)	151, 1105, 1158
BstF5I	GGATG	5 cut(s)	195, 445, 711, 874, 910
BstHHI	GCGC	2 cut(s)	217, 240
BstKTI	GATC	7 cut(s)	100, 263, 480, 616, 679, 985, 991
BstMAI	GTCTC	6 cut(s)	73, 394, 504, 782, 1077, 1120
BstMBI	GATC	7 cut(s)	97, 260, 477, 613, 676, 982, 988
BstMCI	CGRYCG	2 cut(s)	328, 1048
BstMWI	GCNNNNNNNGC	6 cut(s)	84, 212, 256, 365, 1040, 1061
BstNI	CCWGG	5 cut(s)	140, 337, 365, 548, 553
BstNSI	RCATGY	1 cut(s)	1064
BstSCI	CCNGG	5 cut(s)	138, 335, 363, 546, 551
BstSFI	CTRYAG	2 cut(s)	370, 820
BstSLI	GKGCMC	2 cut(s)	171, 672
BstV1I	GCAGC	1 cut(s)	947
BstV2I	GAAGAC	1 cut(s)	465
BstXI	CCANNNNNNTGG	1 cut(s)	277
BstZI	CGGCCG	1 cut(s)	325
BsuI	GTATCC	1 cut(s)	124
BtgI	CCRYGG	3 cut(s)	151, 1105, 1158
BtgZI	GCGATG	2 cut(s)	68, 488
BtsCI	GGATG	5 cut(s)	195, 445, 711, 874, 910
BtsI	GCAGTG	2 cut(s)	609, 885
BtsIMutI	CAGTG	5 cut(s)	108, 609, 885, 1128, 1176
Cac8I	GCNNGC	4 cut(s)	57, 89, 159, 1062
CaiI	CAGNNNCTG	1 cut(s)	884
CciI	TCATGA	2 cut(s)	523, 985
CfoI	GCGC	2 cut(s)	217, 240
Cfr13I	GGNCC	7 cut(s)	155, 280, 394, 668, 669, 844, 1073
CpoI	CGGWCCG	1 cut(s)	394
CseI	GACGC	1 cut(s)	55
Csp6I	GTAC	2 cut(s)	433, 1227
CspI	CGGWCCG	1 cut(s)	394
CviQI	GTAC	2 cut(s)	433, 1227
DdeI	CTNAG	4 cut(s)	70, 595, 885, 1245
DpnI	GATC	7 cut(s)	99, 262, 479, 615, 678, 984, 990
DpnII	GATC	7 cut(s)	97, 260, 477, 613, 676, 982, 988
EaeI	YGGCCR	3 cut(s)	42, 325, 708
EagI	CGGCCG	1 cut(s)	325
Eam1104I	CTCTTC	1 cut(s)	233
EarI	CTCTTC	1 cut(s)	233
EciI	GGCGGA	2 cut(s)	346, 470
Ecl136II	GAGCTC	1 cut(s)	250
EclXI	CGGCCG	1 cut(s)	325
Eco130I	CCWWGG	3 cut(s)	151, 687, 1105
Eco147I	AGGCCT	3 cut(s)	368, 551, 686
Eco24I	GRGCYC	3 cut(s)	252, 292, 672
Eco31I	GGTCTC	2 cut(s)	782, 1120
Eco47I	GGWCC	3 cut(s)	280, 394, 844
Eco52I	CGGCCG	1 cut(s)	325
Eco53kI	GAGCTC	1 cut(s)	250
Eco72I	CACGTG	1 cut(s)	62
EcoICRI	GAGCTC	1 cut(s)	250
EcoO109I	RGGNCCY	1 cut(s)	1073
EcoRII	CCWGG	5 cut(s)	138, 335, 363, 546, 551
EcoT14I	CCWWGG	3 cut(s)	151, 687, 1105
EcoT38I	GRGCYC	3 cut(s)	252, 292, 672
ErhI	CCWWGG	3 cut(s)	151, 687, 1105
Esp3I	CGTCTC	2 cut(s)	73, 504
FalI	AAGNNNNNCTT	2 cut(s)	287, 319
FbaI	TGATCA	1 cut(s)	477
FblI	GTMKAC	1 cut(s)	806
Fnu4HI	GCNGC	1 cut(s)	936
FokI	GGATG	5 cut(s)	182, 452, 718, 881, 917
FriOI	GRGCYC	3 cut(s)	252, 292, 672
Fsp4HI	GCNGC	1 cut(s)	936
FspBI	CTAG	1 cut(s)	35
GlaI	GCGC	2 cut(s)	216, 239
GluI	GCNGC	1 cut(s)	936
GsaI	CCCAGC	1 cut(s)	643
GsuI	CTGGAG	3 cut(s)	358, 1152, 1207
HgaI	GACGC	1 cut(s)	55
HhaI	GCGC	2 cut(s)	217, 240
Hin1I	GRCGYC	1 cut(s)	66
Hin6I	GCGC	2 cut(s)	215, 238
HinP1I	GCGC	2 cut(s)	215, 238
HincII	GTYRAC	2 cut(s)	105, 565
HindII	GTYRAC	2 cut(s)	105, 565
HinfI	GANTC	9 cut(s)	135, 191, 321, 387, 803, 1014, 1132, 1217, 1250
HphI	GGTGA	2 cut(s)	408, 1202
Hpy166II	GTNNAC	5 cut(s)	32, 105, 426, 565, 807
Hpy188I	TCNGA	4 cut(s)	200, 398, 802, 893
Hpy188III	TCNNGA	3 cut(s)	524, 680, 986
Hpy8I	GTNNAC	5 cut(s)	32, 105, 426, 565, 807
Hpy99I	CGWCG	3 cut(s)	347, 535, 1211
HpyAV	CCTTC	7 cut(s)	127, 319, 370, 801, 922, 1171, 1193
HpyCH4III	ACNGT	4 cut(s)	112, 591, 736, 1231
HpyCH4IV	ACGT	2 cut(s)	61, 1146
HpyCH4V	TGCA	8 cut(s)	59, 410, 587, 602, 651, 1055, 1064, 1186
HpyF10VI	GCNNNNNNNGC	6 cut(s)	84, 212, 256, 365, 1040, 1061
HpyF3I	CTNAG	4 cut(s)	70, 595, 885, 1245
HpySE526I	ACGT	2 cut(s)	61, 1146
Hsp92I	GRCGYC	1 cut(s)	66
HspAI	GCGC	2 cut(s)	215, 238
Ksp22I	TGATCA	1 cut(s)	477
Kzo9I	GATC	7 cut(s)	97, 260, 477, 613, 676, 982, 988
LmnI	GCTCC	5 cut(s)	96, 247, 256, 339, 1171
Lsp1109I	GCAGC	1 cut(s)	947
MaeI	CTAG	1 cut(s)	35
MaeII	ACGT	2 cut(s)	61, 1146
MaeIII	GTNAC	2 cut(s)	730, 1020
MalI	GATC	7 cut(s)	99, 262, 479, 615, 678, 984, 990
MboI	GATC	7 cut(s)	97, 260, 477, 613, 676, 982, 988
MboII	GAAGA	5 cut(s)	220, 255, 258, 470, 1023
MhlI	GDGCHC	6 cut(s)	171, 252, 292, 596, 609, 672
MlsI	TGGCCA	1 cut(s)	44
MluCI	AATT	3 cut(s)	723, 743, 996
MluNI	TGGCCA	1 cut(s)	44
MlyI	GAGTC	5 cut(s)	144, 200, 396, 812, 1226
MmeI	TCCRAC	2 cut(s)	307, 421
Mox20I	TGGCCA	1 cut(s)	44
MscI	TGGCCA	1 cut(s)	44
MseI	TTAA	4 cut(s)	315, 726, 785, 995
MslI	CAYNNNNRTG	1 cut(s)	275
Msp20I	TGGCCA	1 cut(s)	44
MspA1I	CMGCKG	1 cut(s)	643
MspR9I	CCNGG	5 cut(s)	140, 337, 365, 548, 553
MvaI	CCWGG	5 cut(s)	140, 337, 365, 548, 553
MwoI	GCNNNNNNNGC	6 cut(s)	84, 212, 256, 365, 1040, 1061
NcoI	CCATGG	2 cut(s)	151, 1105
NdeII	GATC	7 cut(s)	97, 260, 477, 613, 676, 982, 988
NlaIV	GGNNCC	4 cut(s)	334, 670, 1075, 1167
NmeAIII	GCCGAG	1 cut(s)	353
NmuCI	GTSAC	2 cut(s)	730, 1020
NspI	RCATGY	1 cut(s)	1064
PaeI	GCATGC	1 cut(s)	1064
PagI	TCATGA	2 cut(s)	523, 985
PceI	AGGCCT	3 cut(s)	368, 551, 686
PcsI	WCGNNNNNNNCGW	3 cut(s)	91, 669, 1203
PfeI	GAWTC	4 cut(s)	321, 1014, 1132, 1250
PflMI	CCANNNNNTGG	2 cut(s)	469, 1111
PkrI	GCNGC	1 cut(s)	937
PleI	GAGTC	5 cut(s)	143, 199, 395, 811, 1225
PmaCI	CACGTG	1 cut(s)	62
PmlI	CACGTG	1 cut(s)	62
PpsI	GAGTC	5 cut(s)	143, 199, 395, 811, 1225
Ppu21I	YACGTR	1 cut(s)	62
Psp124BI	GAGCTC	1 cut(s)	252
Psp6I	CCWGG	5 cut(s)	138, 335, 363, 546, 551
PspCI	CACGTG	1 cut(s)	62
PspFI	CCCAGC	1 cut(s)	639
PspGI	CCWGG	5 cut(s)	138, 335, 363, 546, 551
PspN4I	GGNNCC	4 cut(s)	334, 670, 1075, 1167
PspOMI	GGGCCC	1 cut(s)	668
PspPI	GGNCC	7 cut(s)	155, 280, 394, 668, 669, 844, 1073
PstNI	CAGNNNCTG	1 cut(s)	884
RsaI	GTAC	2 cut(s)	434, 1228
RsaNI	GTAC	2 cut(s)	433, 1227
RseI	CAYNNNNRTG	1 cut(s)	275
Rsr2I	CGGWCCG	1 cut(s)	394
RsrII	CGGWCCG	1 cut(s)	394
SacI	GAGCTC	1 cut(s)	252
SaqAI	TTAA	4 cut(s)	315, 726, 785, 995
SatI	GCNGC	1 cut(s)	936
Sau3AI	GATC	7 cut(s)	97, 260, 477, 613, 676, 982, 988
Sau96I	GGNCC	7 cut(s)	155, 280, 394, 668, 669, 844, 1073
ScaI	AGTACT	1 cut(s)	1228
SchI	GAGTC	5 cut(s)	144, 200, 396, 812, 1226
ScrFI	CCNGG	5 cut(s)	140, 337, 365, 548, 553
SduI	GDGCHC	6 cut(s)	171, 252, 292, 596, 609, 672
SfcI	CTRYAG	2 cut(s)	370, 820
SinI	GGWCC	3 cut(s)	280, 394, 844
SmiMI	CAYNNNNRTG	1 cut(s)	275
SmlI	CTYRAG	1 cut(s)	1235
SmoI	CTYRAG	1 cut(s)	1235
SpeI	ACTAGT	1 cut(s)	34
SphI	GCATGC	1 cut(s)	1064
Sse9I	AATT	3 cut(s)	723, 743, 996
SseBI	AGGCCT	3 cut(s)	368, 551, 686
SsiI	CCGC	5 cut(s)	357, 455, 643, 699, 1048
SspI	AATATT	1 cut(s)	946
SspMI	CTAG	1 cut(s)	35
SstI	GAGCTC	1 cut(s)	252
StuI	AGGCCT	3 cut(s)	368, 551, 686
StyD4I	CCNGG	5 cut(s)	138, 335, 363, 546, 551
StyI	CCWWGG	3 cut(s)	151, 687, 1105
TaaI	ACNGT	4 cut(s)	112, 591, 736, 1231
TaiI	ACGT	2 cut(s)	64, 1149
TaqI	TCGA	3 cut(s)	133, 292, 1175
TaqII	GACCGA	2 cut(s)	382, 861
TasI	AATT	3 cut(s)	723, 743, 996
TatI	WGTACW	1 cut(s)	1226
TfiI	GAWTC	4 cut(s)	321, 1014, 1132, 1250
Tru1I	TTAA	4 cut(s)	315, 726, 785, 995
Tru9I	TTAA	4 cut(s)	315, 726, 785, 995
TscAI	CASTG	5 cut(s)	115, 609, 885, 1128, 1176
TseFI	GTSAC	2 cut(s)	730, 1020
TseI	GCWGC	1 cut(s)	935
Tsp45I	GTSAC	2 cut(s)	730, 1020
TspDTI	ATGAA	2 cut(s)	540, 1086
TspGWI	ACGGA	4 cut(s)	83, 269, 548, 1147
TspRI	CASTG	5 cut(s)	115, 609, 885, 1128, 1176
Van91I	CCANNNNNTGG	2 cut(s)	469, 1111
VpaK11BI	GGWCC	3 cut(s)	280, 394, 844
XapI	RAATTY	1 cut(s)	743
XceI	RCATGY	1 cut(s)	1064
XcmI	CCANNNNNNNNNTGG	2 cut(s)	838, 946
XmiI	GTMKAC	1 cut(s)	806
XspI	CTAG	1 cut(s)	35
ZrmI	AGTACT	1 cut(s)	1228

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.