Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3A

Orthogroup ID

OG0002802

Physical Location & Seq

Genomic Coordinates Forward (+)

11518264 .. 11523863

Gene Structure 5600 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3AG133100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1812 bp

ATGATGGTCGTGATCCGACCTGCCATGAAATGGGTCGCCAGCCGGTGCACACCGGAGCAAGATGTCTTGGACGAAGCCTATATTTGCTTAACCTTAACTGGAGTAATGGTGGCCGGGTTCATGACTGACATAATTGGAATTCATTCCATATTTGGAGCTTTCGTCTTCGGACTCACAATTCCGAAAGGACAGTTTGCAGATAGATTAATATCGAGGATTGAAGACTTTGTGTCCGGCTTGTTGCTTCCGCTTTACTTTGCATCAAGTGGGTTGAAAACAGATGTGGCTAAAATACGTGGCGGCAGGGCATGGGGGTTGTTGGCTCTGGTTATAACCACGGCTTGCGCTGGGAAGATTCTCGGGACGTTTGTGGTGGCAATGATGTTTATGATTCCGGCCAGAGAGTCATTGACGCTTGGTGTGCTCATGAACACTAAAGGCTTGGTAGAGCTCATTGTTCTAAACATTGGCAAGGAGCAGAAGGTGCTAAATGACGAGTCATTTGCAATTCTAGTCCTCATGGCACTCTCCACCACCTTCATTACATGTCCGGTAGTGATGGCCATTTACAGACCGGCACGTGGAATCTCTATTCGCACTCACCGCAAACTTTGTGATCTCTCCACAGCTGATCAAGCCGCCAAAGACGAGCTCCGAATTCTTGCATGTGTTCATGGTCCAAACAATGCACCCTCGCTCATAAGCTTAATAGATTCAATTCGAAGCACCAAAAAATCCCAACTCAAACTCTTCCTAATGCACCTTGTTGAACTCACCGAGCGCTCTTCTTCAATCGTTATGGTCCAACGGGCTCGAAAAAATGGGTTTCCTTTCTTTAATCGAACGGCTCGCGGTGAGTGGTATGATAGGGTAGCTGGGGCATTCCAAGCCTATAGTCAATTGGGCCGAGTCACGGTCCGGCCCACAACTGCAATTTCGGCTTTGTCCACAATGTATGAGGATATTTGCCATGCGGCGGAAGAGAAGAGGGCGGCGATGATCGTCTTGCCATTCCACAAGCAATGGAGATGTGATGGTGATGATCATGAGAAAAAAGAGATTGATGTGGGCAATGATTGGAGAGGGGTCAACCAAAGAGTGCTCCAAAATGCGCCGTGCTCGGTTGCAGTGCTTGTGGACCGTGGATTTGATAATTTCAAAGCCCAAAGTCTCGAGCCGGATAAGCTTGTGGCCCTAAGGATTTGTATTGTGTTTTTGGGTGGGCCTGATGATCGAGAGGCCTTGGAATTGGGTGGTCGGATGGCTGACCACCCAGCGGTTAAAGTGAAGGTTGTGAGGTTCGTCAAGAAAGAAGGTCTGGAGAGTAGTAATGGGTCTCATGGGCTTATGTTAAAGCCTTCACCCACCAAGTCCACCGAGAACAATTGTAGCTTCTCCACAGCCATAATGGACCGAGAGAATGAAAAGGAACTAGATGAGGCTGCAGTGGCTGAGTTCAGAAGCAAGTTGGTGGAGGATGGGACGGCAGAGTACACTGAGCTAGTGGTGGCTAGGAATATTGTGGAGGGGGTGTTGGCAATTGGACGCAGTGGAGATCAAGATCTAATAATAGTAGGAAAAGGACGGTTCCCATCAAGTTTGGTAGCCGAATTGGCAGATCGACAAGCGGAGCACGCTGAGCTGGGGCCTGTCGGAGACATTTTGGCCTATTCCGGCCACGATGTGGTCTCATCAATCCTTGTGATTCAACAGCACAATGTAGCTCATGCGGTGGAAGCTCCAGTGTCCAAGATGGTGCGTGGTGAGTATGAAAAGTTTGCCCCTGATGAATCCTCCAGTGTACTTGCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006605 GO:0006623 GO:0006810 GO:0006811 GO:0006812 GO:0006873 GO:0006875 GO:0006885 GO:0006886 GO:0007034 GO:0008104 GO:0008150 GO:0009987 GO:0012505 GO:0015031 GO:0015672 GO:0015833 GO:0019725 GO:0030003 GO:0030004 GO:0030007 GO:0030104 GO:0033036 GO:0033365 GO:0034613 GO:0042592 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045184 GO:0046907 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055065 GO:0055067 GO:0055075 GO:0055080 GO:0055082 GO:0065007 GO:0065008 GO:0070727 GO:0071702 GO:0071705 GO:0072594 GO:0072665 GO:0072666 GO:0098771

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Na_H_Exchanger

Protein Analysis

603

Amino Acids

66.01

Weight (kDa)

6.53

Isoelectric Point (pI)

35.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Na_H_Exchanger	PF00999	3 - 182	8.7e-25	Sodium/hydrogen exchanger, transmembrane
CHX17_2nd	PF23256	247 - 384	4.4e-38	Plant cation/H(+) antiporter domain
CHX17_C	PF23259	399 - 572	9.5e-10	Plant cation/H(+) antiporter, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002802)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G53720 AT3G53720
fragaria_vesca	FvH4_6g14141 FvH4_6g14141 FvH4_6g14150
malus_domestica	MD04G1124400.v1.1 MD04G1124500.v1.1 MD04G1124700.v1.1 MD12G1139700.v1.1
prunus_persica	Prupe.6G251600_v2.0.a1 Prupe.6G251700_v2.0.a1 Prupe.6G251700_v2.0.a1
pyrus_communis	pycom04g11220 pycom04g11230 pycom12g13420
rosa_chinensis	RchiOBHm_Chr3g0467061 RchiOBHm_Chr3g0467081 RchiOBHm_Chr3g0467091
rosa_laevigata	RLG00000024527 RLG00000024528 RLG00000024532
rosa_multiflora	Rmu_co8287377.1_g000001 Rmu_co8419643.1_g000001 Rmu_sc0012393.1_g000001 Rmu_ssc0000065.1_g000004
rosa_roxburghii	Rroxscaffold_6G00413900 Rroxscaffold_6G00413920
rosa_rugosa	Rorug03G0085100 Rorug03G0085400
rosa_samantha	Rh3AG133100 Rh3AG133400 Rh3BG154200 Rh3BG154600 Rh3CG154200 Rh3CG154300 Rh3DG155200 Rh3DG155400
rosa_wichuraiana	Rw3G012600 Rw3G012610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	332
Acc36I	ACCTGC	1 cut(s)	28
AccB7I	CCANNNNNTGG	2 cut(s)	30, 1684
AccII	CGCG	1 cut(s)	852
AclWI	GGATC	1 cut(s)	7
AcoI	YGGCCR	4 cut(s)	111, 396, 561, 1675
AcsI	RAATTY	2 cut(s)	138, 657
AcvI	CACGTG	1 cut(s)	581
AdeI	CACNNNGTG	1 cut(s)	1684
AfaI	GTAC	2 cut(s)	1493, 1803
AfeI	AGCGCT	1 cut(s)	782
AfiI	CCNNNNNNNGG	6 cut(s)	30, 581, 913, 976, 1276, 1684
AflIII	ACRYGT	1 cut(s)	545
AgsI	TTSAA	7 cut(s)	221, 274, 717, 770, 792, 1159, 1709
AhdI	GACNNNNNGTC	1 cut(s)	229
Alw21I	GWGCWC	7 cut(s)	50, 426, 453, 654, 1104, 1121, 1635
Alw26I	GTCTC	4 cut(s)	1175, 1341, 1650, 1693
Alw44I	GTGCAC	1 cut(s)	46
AlwI	GGATC	1 cut(s)	7
AlwNI	CAGNNNCTG	1 cut(s)	1451
Ama87I	CYCGRG	2 cut(s)	359, 1172
Aor51HI	AGCGCT	1 cut(s)	782
ApaLI	GTGCAC	1 cut(s)	46
ApeKI	GCWGC	1 cut(s)	1442
ApoI	RAATTY	2 cut(s)	138, 657
ArsI	GACNNNNNNTTYG	4 cut(s)	485, 517, 1130, 1162
AseI	ATTAAT	1 cut(s)	206
Asp700I	GAANNNNTTC	1 cut(s)	142
AspLEI	GCGC	3 cut(s)	347, 783, 1114
AsuC2I	CCSGG	1 cut(s)	115
AsuHPI	GGTGA	6 cut(s)	593, 766, 866, 1049, 1353, 1775
AsuII	TTCGAA	1 cut(s)	721
AvaI	CYCGRG	2 cut(s)	359, 1172
AvaII	GGWCC	5 cut(s)	677, 802, 916, 1138, 1411
AxyI	CCTNAGG	1 cut(s)	1196
BaeGI	GKGCMC	1 cut(s)	50
BalI	TGGCCA	1 cut(s)	563
BanII	GRGCYC	3 cut(s)	453, 654, 814
BbrPI	CACGTG	1 cut(s)	581
BbsI	GAAGAC	2 cut(s)	157, 228
Bbv12I	GWGCWC	7 cut(s)	50, 426, 453, 654, 1104, 1121, 1635
BbvI	GCAGC	1 cut(s)	1429
BccI	CCATC	6 cut(s)	553, 1028, 1255, 1472, 1600, 1747
BceAI	ACGGC	4 cut(s)	354, 861, 1099, 1500
BcgI	CGANNNNNNTGC	2 cut(s)	485, 519
BclI	TGATCA	2 cut(s)	631, 1042
BcnI	CCSGG	1 cut(s)	115
BcoDI	GTCTC	4 cut(s)	1175, 1341, 1650, 1693
BfaI	CTAG	4 cut(s)	512, 1433, 1502, 1512
BfmI	CTRYAG	2 cut(s)	892, 1443
BfoI	RGCGCY	1 cut(s)	784
BfuAI	ACCTGC	1 cut(s)	28
BglI	GCCNNNNNGGC	1 cut(s)	1613
BglII	AGATCT	1 cut(s)	1561
BisI	GCNGC	5 cut(s)	301, 639, 975, 993, 1443
BlpI	GCTNAGC	1 cut(s)	1638
BlsI	GCNGC	5 cut(s)	302, 640, 976, 994, 1444
Bme1390I	CCNGG	1 cut(s)	115
Bme18I	GGWCC	5 cut(s)	677, 802, 916, 1138, 1411
BmeRI	GACNNNNNGTC	1 cut(s)	229
BmeT110I	CYCGRG	2 cut(s)	359, 1172
BmiI	GGNNCC	2 cut(s)	1589, 1647
BmrFI	CCNGG	1 cut(s)	115
BmsI	GCATC	1 cut(s)	269
BpiI	GAAGAC	2 cut(s)	157, 228
BpmI	CTGGAG	4 cut(s)	120, 1340, 1725, 1780
Bpu1102I	GCTNAGC	1 cut(s)	1638
Bpu14I	TTCGAA	1 cut(s)	721
BpuMI	CCSGG	1 cut(s)	115
BsaAI	YACGTR	2 cut(s)	296, 581
BsaBI	GATNNNNATC	2 cut(s)	208, 1560
BsaI	GGTCTC	2 cut(s)	1341, 1693
BsaJI	CCNNGG	3 cut(s)	336, 1141, 1242
BsaWI	WCCGGW	2 cut(s)	52, 550
BsaXI	ACNNNNNCTCC	6 cut(s)	93, 123, 147, 177, 1517, 1547
Bsc4I	CCNNNNNNNGG	6 cut(s)	30, 581, 913, 976, 1276, 1684
Bse118I	RCCGGY	2 cut(s)	42, 574
Bse1I	ACTGG	3 cut(s)	103, 1742, 1797
Bse21I	CCTNAGG	1 cut(s)	1196
Bse3DI	GCAATG	3 cut(s)	384, 1028, 1078
Bse8I	GATNNNNATC	2 cut(s)	208, 1560
BseDI	CCNNGG	3 cut(s)	336, 1141, 1242
BseGI	GGATG	2 cut(s)	1266, 1483
BseJI	GATNNNNATC	2 cut(s)	208, 1560
BseLI	CCNNNNNNNGG	6 cut(s)	30, 581, 913, 976, 1276, 1684
BseMI	GCAATG	3 cut(s)	384, 1028, 1078
BseMII	CTCAG	3 cut(s)	1443, 1488, 1629
BseNI	ACTGG	3 cut(s)	103, 1742, 1797
BseSI	GKGCMC	1 cut(s)	50
BseXI	GCAGC	1 cut(s)	1429
BseYI	CCCAGC	4 cut(s)	347, 875, 1273, 1642
Bsh1236I	CGCG	1 cut(s)	852
BsiHKAI	GWGCWC	7 cut(s)	50, 426, 453, 654, 1104, 1121, 1635
BsiHKCI	CYCGRG	2 cut(s)	359, 1172
BslFI	GGGAC	2 cut(s)	376, 1495
BslI	CCNNNNNNNGG	6 cut(s)	30, 581, 913, 976, 1276, 1684
BsmAI	GTCTC	4 cut(s)	1175, 1341, 1650, 1693
BsmFI	GGGAC	2 cut(s)	376, 1495
BsmI	GAATGC	1 cut(s)	881
Bso31I	GGTCTC	2 cut(s)	1341, 1693
BsoBI	CYCGRG	2 cut(s)	359, 1172
Bsp119I	TTCGAA	1 cut(s)	721
Bsp1286I	GDGCHC	8 cut(s)	50, 426, 453, 654, 814, 1104, 1121, 1635
Bsp143I	GATC	9 cut(s)	12, 616, 631, 999, 1042, 1231, 1555, 1561, 1618
Bsp1720I	GCTNAGC	1 cut(s)	1638
BspCNI	CTCAG	3 cut(s)	1444, 1489, 1630
BspFNI	CGCG	1 cut(s)	852
BspHI	TCATGA	3 cut(s)	120, 426, 1045
BspLI	GGNNCC	2 cut(s)	1589, 1647
BspMAI	CTGCAG	1 cut(s)	1447
BspMI	ACCTGC	1 cut(s)	28
BspPI	GGATC	1 cut(s)	7
BspQI	GCTCTTC	1 cut(s)	790
BspT104I	TTCGAA	1 cut(s)	721
BspTNI	GGTCTC	2 cut(s)	1341, 1693
BsrDI	GCAATG	3 cut(s)	384, 1028, 1078
BsrFI	RCCGGY	2 cut(s)	42, 574
BsrI	ACTGG	3 cut(s)	103, 1742, 1797
BssAI	RCCGGY	2 cut(s)	42, 574
BssECI	CCNNGG	3 cut(s)	336, 1141, 1242
BssMI	GATC	9 cut(s)	12, 616, 631, 999, 1042, 1231, 1555, 1561, 1618
BssT1I	CCWWGG	1 cut(s)	1242
Bst4CI	ACNGT	4 cut(s)	192, 916, 1142, 1587
Bst6I	CTCTTC	4 cut(s)	755, 790, 975, 980
BstAPI	GCANNNNNTGC	1 cut(s)	484
BstBAI	YACGTR	2 cut(s)	296, 581
BstBI	TTCGAA	1 cut(s)	721
BstC8I	GCNNGC	4 cut(s)	40, 343, 850, 1635
BstDEI	CTNAG	4 cut(s)	1196, 1452, 1497, 1638
BstDSI	CCRYGG	2 cut(s)	336, 1141
BstF5I	GGATG	2 cut(s)	1266, 1483
BstFNI	CGCG	1 cut(s)	852
BstH2I	RGCGCY	1 cut(s)	784
BstHHI	GCGC	3 cut(s)	347, 783, 1114
BstKTI	GATC	9 cut(s)	15, 619, 634, 1002, 1045, 1234, 1558, 1564, 1621
BstMAI	GTCTC	4 cut(s)	1175, 1341, 1650, 1693
BstMBI	GATC	9 cut(s)	12, 616, 631, 999, 1042, 1231, 1555, 1561, 1618
BstNSI	RCATGY	2 cut(s)	549, 669
BstSCI	CCNGG	1 cut(s)	113
BstSFI	CTRYAG	2 cut(s)	892, 1443
BstSLI	GKGCMC	1 cut(s)	50
BstUI	CGCG	1 cut(s)	852
BstV1I	GCAGC	1 cut(s)	1429
BstV2I	GAAGAC	2 cut(s)	157, 228
BstX2I	RGATCY	1 cut(s)	1561
BstYI	RGATCY	1 cut(s)	1561
Bsu36I	CCTNAGG	1 cut(s)	1196
BtgI	CCRYGG	2 cut(s)	336, 1141
BtgZI	GCGATG	1 cut(s)	1010
BtsCI	GGATG	2 cut(s)	1266, 1483
BtsI	GCAGTG	3 cut(s)	1134, 1452, 1555
BtsIMutI	CAGTG	6 cut(s)	1134, 1452, 1494, 1555, 1749, 1804
BveI	ACCTGC	1 cut(s)	28
Cac8I	GCNNGC	4 cut(s)	40, 343, 850, 1635
CaiI	CAGNNNCTG	1 cut(s)	1451
CciI	TCATGA	3 cut(s)	120, 426, 1045
CfoI	GCGC	3 cut(s)	347, 783, 1114
Cfr10I	RCCGGY	2 cut(s)	42, 574
CpoI	CGGWCCG	1 cut(s)	916
CseI	GACGC	2 cut(s)	421, 1554
Csp6I	GTAC	2 cut(s)	1492, 1802
CspI	CGGWCCG	1 cut(s)	916
CviQI	GTAC	2 cut(s)	1492, 1802
DdeI	CTNAG	4 cut(s)	1196, 1452, 1497, 1638
DpnI	GATC	9 cut(s)	14, 618, 633, 1001, 1044, 1233, 1557, 1563, 1620
DpnII	GATC	9 cut(s)	12, 616, 631, 999, 1042, 1231, 1555, 1561, 1618
DraIII	CACNNNGTG	1 cut(s)	1684
DriI	GACNNNNNGTC	1 cut(s)	229
EaeI	YGGCCR	4 cut(s)	111, 396, 561, 1675
Eam1104I	CTCTTC	4 cut(s)	755, 790, 975, 980
Eam1105I	GACNNNNNGTC	1 cut(s)	229
EarI	CTCTTC	4 cut(s)	755, 790, 975, 980
EciI	GGCGGA	1 cut(s)	992
Ecl136II	GAGCTC	2 cut(s)	451, 652
Eco130I	CCWWGG	1 cut(s)	1242
Eco147I	AGGCCT	1 cut(s)	1241
Eco24I	GRGCYC	3 cut(s)	453, 654, 814
Eco31I	GGTCTC	2 cut(s)	1341, 1693
Eco47I	GGWCC	5 cut(s)	677, 802, 916, 1138, 1411
Eco47III	AGCGCT	1 cut(s)	782
Eco53kI	GAGCTC	2 cut(s)	451, 652
Eco72I	CACGTG	1 cut(s)	581
Eco81I	CCTNAGG	1 cut(s)	1196
Eco88I	CYCGRG	2 cut(s)	359, 1172
EcoICRI	GAGCTC	2 cut(s)	451, 652
EcoO109I	RGGNCCY	1 cut(s)	1646
EcoRI	GAATTC	2 cut(s)	138, 657
EcoT14I	CCWWGG	1 cut(s)	1242
EcoT38I	GRGCYC	3 cut(s)	453, 654, 814
ErhI	CCWWGG	1 cut(s)	1242
FaqI	GGGAC	2 cut(s)	376, 1495
FbaI	TGATCA	2 cut(s)	631, 1042
Fnu4HI	GCNGC	5 cut(s)	301, 639, 975, 993, 1443
FokI	GGATG	2 cut(s)	1273, 1490
FriOI	GRGCYC	3 cut(s)	453, 654, 814
Fsp4HI	GCNGC	5 cut(s)	301, 639, 975, 993, 1443
FspBI	CTAG	4 cut(s)	512, 1433, 1502, 1512
GlaI	GCGC	3 cut(s)	346, 782, 1113
GluI	GCNGC	5 cut(s)	301, 639, 975, 993, 1443
GsaI	CCCAGC	4 cut(s)	351, 879, 1277, 1646
GsuI	CTGGAG	4 cut(s)	120, 1340, 1725, 1780
HaeII	RGCGCY	1 cut(s)	784
HgaI	GACGC	2 cut(s)	421, 1554
HhaI	GCGC	3 cut(s)	347, 783, 1114
Hin6I	GCGC	3 cut(s)	345, 781, 1112
HinP1I	GCGC	3 cut(s)	345, 781, 1112
HincII	GTYRAC	1 cut(s)	1090
HindII	GTYRAC	1 cut(s)	1090
HindIII	AAGCTT	2 cut(s)	703, 1184
HphI	GGTGA	6 cut(s)	593, 766, 866, 1049, 1353, 1775
Hpy166II	GTNNAC	7 cut(s)	48, 948, 1090, 1138, 1374, 1494, 1802
Hpy188I	TCNGA	7 cut(s)	17, 170, 183, 656, 1260, 1460, 1655
Hpy8I	GTNNAC	7 cut(s)	48, 948, 1090, 1138, 1374, 1494, 1802
HpyAV	CCTTC	5 cut(s)	475, 547, 1282, 1307, 1368
HpyCH4III	ACNGT	4 cut(s)	192, 916, 1142, 1587
HpyCH4IV	ACGT	3 cut(s)	295, 365, 580
HpyF3I	CTNAG	4 cut(s)	1196, 1452, 1497, 1638
HpySE526I	ACGT	3 cut(s)	295, 365, 580
HspAI	GCGC	3 cut(s)	345, 781, 1112
Ksp22I	TGATCA	2 cut(s)	631, 1042
Kzo9I	GATC	9 cut(s)	12, 616, 631, 999, 1042, 1231, 1555, 1561, 1618
LguI	GCTCTTC	1 cut(s)	790
LmnI	GCTCC	7 cut(s)	55, 155, 475, 657, 1107, 1630, 1744
Lsp1109I	GCAGC	1 cut(s)	1429
LweI	GCATC	1 cut(s)	269
MaeI	CTAG	4 cut(s)	512, 1433, 1502, 1512
MaeII	ACGT	3 cut(s)	295, 365, 580
MaeIII	GTNAC	1 cut(s)	910
MalI	GATC	9 cut(s)	14, 618, 633, 1001, 1044, 1233, 1557, 1563, 1620
MboI	GATC	9 cut(s)	12, 616, 631, 999, 1042, 1231, 1555, 1561, 1618
MboII	GAAGA	8 cut(s)	157, 233, 364, 742, 777, 780, 992, 997
MfeI	CAATTG	3 cut(s)	899, 1384, 1539
MflI	RGATCY	1 cut(s)	1561
MhlI	GDGCHC	8 cut(s)	50, 426, 453, 654, 814, 1104, 1121, 1635
MlsI	TGGCCA	1 cut(s)	563
MluNI	TGGCCA	1 cut(s)	563
MlyI	GAGTC	4 cut(s)	165, 413, 506, 918
MmeI	TCCRAC	4 cut(s)	40, 829, 1238, 1633
Mox20I	TGGCCA	1 cut(s)	563
MroXI	GAANNNNTTC	1 cut(s)	142
MscI	TGGCCA	1 cut(s)	563
MseI	TTAA	7 cut(s)	89, 95, 206, 707, 837, 1281, 1352
Msp20I	TGGCCA	1 cut(s)	563
MspA1I	CMGCKG	2 cut(s)	629, 1277
MspR9I	CCNGG	1 cut(s)	115
MunI	CAATTG	3 cut(s)	899, 1384, 1539
Mva1269I	GAATGC	1 cut(s)	881
MvnI	CGCG	1 cut(s)	852
NciI	CCSGG	1 cut(s)	115
NdeII	GATC	9 cut(s)	12, 616, 631, 999, 1042, 1231, 1555, 1561, 1618
NlaIV	GGNNCC	2 cut(s)	1589, 1647
NmeAIII	GCCGAG	1 cut(s)	932
NmuCI	GTSAC	1 cut(s)	910
NspI	RCATGY	2 cut(s)	549, 669
NspV	TTCGAA	1 cut(s)	721
PaeR7I	CTCGAG	1 cut(s)	1172
PagI	TCATGA	3 cut(s)	120, 426, 1045
PceI	AGGCCT	1 cut(s)	1241
PciI	ACATGT	1 cut(s)	545
PciSI	GCTCTTC	1 cut(s)	790
PctI	GAATGC	1 cut(s)	881
PdmI	GAANNNNTTC	1 cut(s)	142
PfeI	GAWTC	6 cut(s)	355, 391, 585, 713, 1705, 1790
PflMI	CCANNNNNTGG	2 cut(s)	30, 1684
PkrI	GCNGC	5 cut(s)	302, 640, 976, 994, 1444
PleI	GAGTC	4 cut(s)	165, 412, 505, 917
PmaCI	CACGTG	1 cut(s)	581
PmlI	CACGTG	1 cut(s)	581
PpsI	GAGTC	4 cut(s)	165, 412, 505, 917
Ppu21I	YACGTR	2 cut(s)	296, 581
PscI	ACATGT	1 cut(s)	545
PshBI	ATTAAT	1 cut(s)	206
PsiI	TTATAA	1 cut(s)	332
Psp124BI	GAGCTC	2 cut(s)	453, 654
PspCI	CACGTG	1 cut(s)	581
PspFI	CCCAGC	4 cut(s)	347, 875, 1273, 1642
PspN4I	GGNNCC	2 cut(s)	1589, 1647
PstI	CTGCAG	1 cut(s)	1447
PstNI	CAGNNNCTG	1 cut(s)	1451
PsuI	RGATCY	1 cut(s)	1561
PvuII	CAGCTG	1 cut(s)	629
RsaI	GTAC	2 cut(s)	1493, 1803
RsaNI	GTAC	2 cut(s)	1492, 1802
Rsr2I	CGGWCCG	1 cut(s)	916
RsrII	CGGWCCG	1 cut(s)	916
SacI	GAGCTC	2 cut(s)	453, 654
SapI	GCTCTTC	1 cut(s)	790
SaqAI	TTAA	7 cut(s)	89, 95, 206, 707, 837, 1281, 1352
SatI	GCNGC	5 cut(s)	301, 639, 975, 993, 1443
Sau3AI	GATC	9 cut(s)	12, 616, 631, 999, 1042, 1231, 1555, 1561, 1618
SchI	GAGTC	4 cut(s)	165, 413, 506, 918
ScrFI	CCNGG	1 cut(s)	115
SduI	GDGCHC	8 cut(s)	50, 426, 453, 654, 814, 1104, 1121, 1635
SfaNI	GCATC	1 cut(s)	269
SfcI	CTRYAG	2 cut(s)	892, 1443
Sfr274I	CTCGAG	1 cut(s)	1172
SfuI	TTCGAA	1 cut(s)	721
SinI	GGWCC	5 cut(s)	677, 802, 916, 1138, 1411
SlaI	CTCGAG	1 cut(s)	1172
SmlI	CTYRAG	1 cut(s)	1172
SmoI	CTYRAG	1 cut(s)	1172
SseBI	AGGCCT	1 cut(s)	1241
SspI	AATATT	1 cut(s)	1519
SspMI	CTAG	4 cut(s)	512, 1433, 1502, 1512
SstI	GAGCTC	2 cut(s)	453, 654
StuI	AGGCCT	1 cut(s)	1241
StyD4I	CCNGG	1 cut(s)	113
StyI	CCWWGG	1 cut(s)	1242
TaaI	ACNGT	4 cut(s)	192, 916, 1142, 1587
TaiI	ACGT	3 cut(s)	298, 368, 583
TaqI	TCGA	7 cut(s)	212, 721, 814, 841, 1173, 1234, 1621
TaqII	GACCGA	1 cut(s)	1428
TatI	WGTACW	2 cut(s)	1491, 1801
TauI	GCSGC	4 cut(s)	303, 641, 977, 995
TfiI	GAWTC	6 cut(s)	355, 391, 585, 713, 1705, 1790
Tru1I	TTAA	7 cut(s)	89, 95, 206, 707, 837, 1281, 1352
Tru9I	TTAA	7 cut(s)	89, 95, 206, 707, 837, 1281, 1352
TscAI	CASTG	6 cut(s)	1134, 1452, 1501, 1555, 1749, 1804
TseFI	GTSAC	1 cut(s)	910
TseI	GCWGC	1 cut(s)	1442
Tsp45I	GTSAC	1 cut(s)	910
TspDTI	ATGAA	9 cut(s)	41, 109, 131, 443, 529, 662, 1437, 1785, 1803
TspRI	CASTG	6 cut(s)	1134, 1452, 1501, 1555, 1749, 1804
Van91I	CCANNNNNTGG	2 cut(s)	30, 1684
VneI	GTGCAC	1 cut(s)	46
VpaK11BI	GGWCC	5 cut(s)	677, 802, 916, 1138, 1411
VspI	ATTAAT	1 cut(s)	206
XapI	RAATTY	2 cut(s)	138, 657
XceI	RCATGY	2 cut(s)	549, 669
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1405
XhoI	CTCGAG	1 cut(s)	1172
XmnI	GAANNNNTTC	1 cut(s)	142
XspI	CTAG	4 cut(s)	512, 1433, 1502, 1512

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.