Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0002802

Physical Location & Seq

Genomic Coordinates Reverse (-)

36773850 .. 36779713

Gene Structure 5864 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000024532

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1809 bp

ATGATGGTCGTGATCCGACCTGCCATGAAATGGGTCGCCAGCCGGTGCACACCGGAGCAAGATGTCGTGGACGAAGCCTATATTTGCTTAACCTTAACCGGAGTAATGGTGGCCGGGTTCATGACTGACATAATTGGAATTCATTCCATATTTGGAGCTTTCGTCTTCGGACTCGCAATTCCGAAAGGACAGTTTGCAGATAGATTAATATCGAGGATTGAAGACATGGTGTCCGGCTTGTTGCTTCCGCTTTACTTTGCATCAAGTGGGTTGAAAACAGATGTGGCTAAAATACGTGGTGGCAGGGCATGGGGGTTGTTGGCTCTGGTTATAACCACGGCTTGCGCTGGGAAGATTCTCGGGACGTTTGTGGTGGCAATGATGTTTATGATTCCGGCAAGAGAGTCATTGACGCTTGGTGTGCTCATGAACACTAAAGGCTTGGTGGAGCTCATTGTTCTAAACATTGGCAAGGAGCAGAAGGTGCTAAATGACGAGTCATTTGCAATTCTAGTCCTCATGGCACTCTTCACCACCTTCATTACATGTCCGGTAGTGATGGCCATTTACAAACCGGCACGTGGAATCTCTATTCGTCCTCACCGTAAACTTTGTGATCTATCCACAGCTGATCAGGCCGCCAAAGACGAGCTCCGAATTCTTGCGTGTGTTCATGGTCCAAACAATGCACCGTCGCTCATAAGCTTAATAGATTCAATTCGAAGCACCCAAAAATCCCAACTCAAACTCTTCCTAATGCACCTTGTTGAACTCACCGAGCGCTCTTCTTCAATCGTTATGGTCCAACGGGCTCGAAAAAATGGGTTTCCTTTCTTTAATCGAACGTCTCGAGGTGAATGGCATGATAGGATTGCTGGGGCATTTCAAGCCTATAGTCAATTAGGCCGAGTCACGGTCCGGCCCACAACCGCAATTTCGGCTTTGTCCACAATGTATGAGGATATTTGCCATGTGGCGGAAAAGAAGAGGGCGGCGATGATCGTCTTGCCATTCCACAAGCAATGGAGATGTGATGGTGATGATCATGAGAAAAAAGAGATCAATGTGGGCAATGATTGGAGCGGGGTCAACCAAAGAGTGCTCCAAAATGCGCCGTGCTCGGTTGCAGTGCTTGTGGACCGTGGATTTGATAACTTCAAAGCCCAAAGTCTCGAGCCGGGTAAGGTTGTGGCCCTACGGATTTGTGTTGTGTTTTTGGGTGGGCCTGATGATCGAGAGGCCTTGGAATTGGGTGGTCGGATGGCTGACCACCCGGCTGTTAAAGTGAAGGTTCTGAGGTTCGTCGAGAAAGAAGGTCAGGAGAGTAATGGGTCTCATGGGCTTATGTTGAAGCCCTCACCAACCAGGTCCACCGAGAACAGTTATAGCTTCCCCACAGCCATAATGGACCGAGAGAAAGAAAAGGAACTAGATGAGGCTGCAGTGGCTGAGTTCAGGAGCAAGTTGGTGGAGGATGGGACGACAGAGTACGCTGAACTAGTGGTGGCTAGGAATATTGTGGAGGGGGTGTTGGCAATTGGACGCAGTGGAGATCAGGACCTAATAATAGTAGGAAAAGGACGGTTCCCATCAAGTATGGTAGCGGAATTGGCAGACCGACAAGCCGAGCACGCTGAGCTGGGGCCTGTCGGAGACATTTTGGCCTATTCTGGCCACGGTGTGGTCTCATCAGTCCTTGTGATTCAACAGCACAATGTAGCTCATGCGGTGGAAGCTCCAGTGTCCAAGATGGTGCATGGTGAGTATGAAAAGTTCGGCCCTGATGAATCCTCCAGTGTACTGGCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006605 GO:0006623 GO:0006810 GO:0006811 GO:0006812 GO:0006873 GO:0006875 GO:0006885 GO:0006886 GO:0007034 GO:0008104 GO:0008150 GO:0009987 GO:0012505 GO:0015031 GO:0015672 GO:0015833 GO:0019725 GO:0030003 GO:0030004 GO:0030007 GO:0030104 GO:0033036 GO:0033365 GO:0034613 GO:0042592 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045184 GO:0046907 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055065 GO:0055067 GO:0055075 GO:0055080 GO:0055082 GO:0065007 GO:0065008 GO:0070727 GO:0071702 GO:0071705 GO:0072594 GO:0072665 GO:0072666 GO:0098771

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Na_H_Exchanger

Protein Analysis

603

Amino Acids

65.79

Weight (kDa)

6.75

Isoelectric Point (pI)

36.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Na_H_Exchanger	PF00999	3 - 182	3.9e-25	Sodium/hydrogen exchanger, transmembrane
CHX17_2nd	PF23256	247 - 384	7.6e-38	Plant cation/H(+) antiporter domain
CHX17_C	PF23259	399 - 571	3e-10	Plant cation/H(+) antiporter, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002802)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G53720 AT3G53720
fragaria_vesca	FvH4_6g14141 FvH4_6g14141 FvH4_6g14150
malus_domestica	MD04G1124400.v1.1 MD04G1124500.v1.1 MD04G1124700.v1.1 MD12G1139700.v1.1
prunus_persica	Prupe.6G251600_v2.0.a1 Prupe.6G251700_v2.0.a1 Prupe.6G251700_v2.0.a1
pyrus_communis	pycom04g11220 pycom04g11230 pycom12g13420
rosa_chinensis	RchiOBHm_Chr3g0467061 RchiOBHm_Chr3g0467081 RchiOBHm_Chr3g0467091
rosa_laevigata	RLG00000024527 RLG00000024528 RLG00000024532
rosa_multiflora	Rmu_co8287377.1_g000001 Rmu_co8419643.1_g000001 Rmu_sc0012393.1_g000001 Rmu_ssc0000065.1_g000004
rosa_roxburghii	Rroxscaffold_6G00413900 Rroxscaffold_6G00413920
rosa_rugosa	Rorug03G0085100 Rorug03G0085400
rosa_samantha	Rh3AG133100 Rh3AG133400 Rh3BG154200 Rh3BG154600 Rh3CG154200 Rh3CG154300 Rh3DG155200 Rh3DG155400
rosa_wichuraiana	Rw3G012600 Rw3G012610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	332
Acc36I	ACCTGC	1 cut(s)	28
AccB7I	CCANNNNNTGG	2 cut(s)	30, 1681
AccBSI	CCGCTC	1 cut(s)	1083
AciI	CCGC	8 cut(s)	248, 639, 930, 977, 992, 1083, 1604, 1727
AclWI	GGATC	1 cut(s)	7
AcoI	YGGCCR	3 cut(s)	111, 561, 1672
AcsI	RAATTY	2 cut(s)	138, 657
AcvI	CACGTG	1 cut(s)	581
AdeI	CACNNNGTG	1 cut(s)	1681
AfaI	GTAC	2 cut(s)	1490, 1800
AfeI	AGCGCT	1 cut(s)	782
AfiI	CCNNNNNNNGG	5 cut(s)	30, 581, 913, 976, 1681
AflIII	ACRYGT	1 cut(s)	545
AgsI	TTSAA	9 cut(s)	221, 274, 717, 770, 792, 887, 1159, 1351, 1706
AhdI	GACNNNNNGTC	1 cut(s)	229
AhlI	ACTAGT	1 cut(s)	1498
AjnI	CCWGG	1 cut(s)	1364
AluBI	AGCT	9 cut(s)	158, 451, 629, 652, 705, 1389, 1639, 1721, 1736
AluI	AGCT	9 cut(s)	158, 451, 629, 652, 705, 1389, 1639, 1721, 1736
Alw21I	GWGCWC	7 cut(s)	50, 426, 453, 654, 1104, 1121, 1632
Alw26I	GTCTC	5 cut(s)	852, 1175, 1338, 1647, 1690
Alw44I	GTGCAC	1 cut(s)	46
AlwI	GGATC	1 cut(s)	7
AlwNI	CAGNNNCTG	1 cut(s)	1448
Ama87I	CYCGRG	3 cut(s)	359, 849, 1172
Aor51HI	AGCGCT	1 cut(s)	782
ApaLI	GTGCAC	1 cut(s)	46
ApeKI	GCWGC	1 cut(s)	1439
ApoI	RAATTY	2 cut(s)	138, 657
ArsI	GACNNNNNNTTYG	4 cut(s)	485, 517, 1130, 1162
AseI	ATTAAT	1 cut(s)	206
Asp700I	GAANNNNTTC	1 cut(s)	142
AspLEI	GCGC	3 cut(s)	347, 783, 1114
AsuC2I	CCSGG	3 cut(s)	115, 1179, 1274
AsuHPI	GGTGA	7 cut(s)	523, 593, 766, 866, 1049, 1350, 1772
AsuII	TTCGAA	1 cut(s)	721
AvaI	CYCGRG	3 cut(s)	359, 849, 1172
AvaII	GGWCC	7 cut(s)	677, 802, 916, 1138, 1368, 1408, 1558
BaeGI	GKGCMC	1 cut(s)	50
BalI	TGGCCA	2 cut(s)	563, 1674
BanII	GRGCYC	3 cut(s)	453, 654, 814
BbrPI	CACGTG	1 cut(s)	581
BbsI	GAAGAC	2 cut(s)	157, 228
Bbv12I	GWGCWC	7 cut(s)	50, 426, 453, 654, 1104, 1121, 1632
BbvI	GCAGC	1 cut(s)	1426
BccI	CCATC	6 cut(s)	553, 1028, 1255, 1469, 1597, 1744
BceAI	ACGGC	2 cut(s)	354, 1099
BcgI	CGANNNNNNTGC	2 cut(s)	485, 519
BciT130I	CCWGG	1 cut(s)	1366
BclI	TGATCA	2 cut(s)	631, 1042
BcnI	CCSGG	3 cut(s)	115, 1179, 1274
BcoDI	GTCTC	5 cut(s)	852, 1175, 1338, 1647, 1690
BcuI	ACTAGT	1 cut(s)	1498
BfaI	CTAG	4 cut(s)	512, 1430, 1499, 1509
BfmI	CTRYAG	2 cut(s)	892, 1440
BfoI	RGCGCY	1 cut(s)	784
BfuAI	ACCTGC	1 cut(s)	28
BisI	GCNGC	3 cut(s)	639, 993, 1440
BlpI	GCTNAGC	1 cut(s)	1635
BlsI	GCNGC	3 cut(s)	640, 994, 1441
Bme1390I	CCNGG	4 cut(s)	115, 1179, 1274, 1366
Bme18I	GGWCC	7 cut(s)	677, 802, 916, 1138, 1368, 1408, 1558
BmeRI	GACNNNNNGTC	1 cut(s)	229
BmeT110I	CYCGRG	3 cut(s)	359, 849, 1172
BmiI	GGNNCC	2 cut(s)	1586, 1644
BmrFI	CCNGG	4 cut(s)	115, 1179, 1274, 1366
BmsI	GCATC	1 cut(s)	269
BpiI	GAAGAC	2 cut(s)	157, 228
BpmI	CTGGAG	2 cut(s)	1722, 1777
Bpu1102I	GCTNAGC	1 cut(s)	1635
Bpu14I	TTCGAA	1 cut(s)	721
BpuMI	CCSGG	3 cut(s)	115, 1179, 1274
BsaAI	YACGTR	2 cut(s)	296, 581
BsaBI	GATNNNNATC	1 cut(s)	208
BsaI	GGTCTC	2 cut(s)	1338, 1690
BsaJI	CCNNGG	4 cut(s)	336, 1141, 1242, 1675
BsaWI	WCCGGW	3 cut(s)	52, 98, 550
BsaXI	ACNNNNNCTCC	6 cut(s)	93, 123, 147, 177, 1514, 1544
Bsc4I	CCNNNNNNNGG	5 cut(s)	30, 581, 913, 976, 1681
Bse118I	RCCGGY	2 cut(s)	42, 574
Bse1I	ACTGG	3 cut(s)	1739, 1794, 1806
Bse3DI	GCAATG	3 cut(s)	384, 1028, 1078
Bse8I	GATNNNNATC	1 cut(s)	208
BseBI	CCWGG	1 cut(s)	1366
BseDI	CCNNGG	4 cut(s)	336, 1141, 1242, 1675
BseGI	GGATG	2 cut(s)	1266, 1480
BseJI	GATNNNNATC	1 cut(s)	208
BseLI	CCNNNNNNNGG	5 cut(s)	30, 581, 913, 976, 1681
BseMI	GCAATG	3 cut(s)	384, 1028, 1078
BseMII	CTCAG	3 cut(s)	1286, 1440, 1626
BseNI	ACTGG	3 cut(s)	1739, 1794, 1806
BseSI	GKGCMC	1 cut(s)	50
BseXI	GCAGC	1 cut(s)	1426
BseYI	CCCAGC	3 cut(s)	347, 875, 1639
BsiHKAI	GWGCWC	7 cut(s)	50, 426, 453, 654, 1104, 1121, 1632
BsiHKCI	CYCGRG	3 cut(s)	359, 849, 1172
BslFI	GGGAC	2 cut(s)	376, 1492
BslI	CCNNNNNNNGG	5 cut(s)	30, 581, 913, 976, 1681
BsmAI	GTCTC	5 cut(s)	852, 1175, 1338, 1647, 1690
BsmBI	CGTCTC	1 cut(s)	852
BsmFI	GGGAC	2 cut(s)	376, 1492
Bso31I	GGTCTC	2 cut(s)	1338, 1690
BsoBI	CYCGRG	3 cut(s)	359, 849, 1172
Bsp119I	TTCGAA	1 cut(s)	721
Bsp1286I	GDGCHC	8 cut(s)	50, 426, 453, 654, 814, 1104, 1121, 1632
Bsp143I	GATC	8 cut(s)	12, 616, 631, 999, 1042, 1059, 1231, 1552
Bsp1720I	GCTNAGC	1 cut(s)	1635
BspACI	CCGC	8 cut(s)	248, 639, 930, 977, 992, 1083, 1604, 1727
BspCNI	CTCAG	3 cut(s)	1287, 1441, 1627
BspHI	TCATGA	3 cut(s)	120, 426, 1045
BspLI	GGNNCC	2 cut(s)	1586, 1644
BspMAI	CTGCAG	1 cut(s)	1444
BspMI	ACCTGC	1 cut(s)	28
BspPI	GGATC	1 cut(s)	7
BspQI	GCTCTTC	1 cut(s)	790
BspT104I	TTCGAA	1 cut(s)	721
BspTNI	GGTCTC	2 cut(s)	1338, 1690
BsrBI	CCGCTC	1 cut(s)	1083
BsrDI	GCAATG	3 cut(s)	384, 1028, 1078
BsrFI	RCCGGY	2 cut(s)	42, 574
BsrI	ACTGG	3 cut(s)	1739, 1794, 1806
BssAI	RCCGGY	2 cut(s)	42, 574
BssECI	CCNNGG	4 cut(s)	336, 1141, 1242, 1675
BssMI	GATC	8 cut(s)	12, 616, 631, 999, 1042, 1059, 1231, 1552
BssT1I	CCWWGG	1 cut(s)	1242
Bst2UI	CCWGG	1 cut(s)	1366
Bst4CI	ACNGT	8 cut(s)	192, 605, 693, 916, 1142, 1382, 1584, 1679
Bst6I	CTCTTC	4 cut(s)	533, 755, 790, 980
BstAPI	GCANNNNNTGC	1 cut(s)	484
BstBAI	YACGTR	2 cut(s)	296, 581
BstBI	TTCGAA	1 cut(s)	721
BstC8I	GCNNGC	3 cut(s)	40, 343, 1632
BstDEI	CTNAG	3 cut(s)	1295, 1449, 1635
BstDSI	CCRYGG	3 cut(s)	336, 1141, 1675
BstF5I	GGATG	2 cut(s)	1266, 1480
BstH2I	RGCGCY	1 cut(s)	784
BstHHI	GCGC	3 cut(s)	347, 783, 1114
BstKTI	GATC	8 cut(s)	15, 619, 634, 1002, 1045, 1062, 1234, 1555
BstMAI	GTCTC	5 cut(s)	852, 1175, 1338, 1647, 1690
BstMBI	GATC	8 cut(s)	12, 616, 631, 999, 1042, 1059, 1231, 1552
BstNI	CCWGG	1 cut(s)	1366
BstNSI	RCATGY	1 cut(s)	549
BstSCI	CCNGG	4 cut(s)	113, 1177, 1272, 1364
BstSFI	CTRYAG	2 cut(s)	892, 1440
BstSLI	GKGCMC	1 cut(s)	50
BstV1I	GCAGC	1 cut(s)	1426
BstV2I	GAAGAC	2 cut(s)	157, 228
BstXI	CCANNNNNNTGG	1 cut(s)	1801
BtgI	CCRYGG	3 cut(s)	336, 1141, 1675
BtgZI	GCGATG	1 cut(s)	1010
BtsCI	GGATG	2 cut(s)	1266, 1480
BtsI	GCAGTG	3 cut(s)	1134, 1449, 1552
BtsIMutI	CAGTG	5 cut(s)	1134, 1449, 1552, 1746, 1801
BveI	ACCTGC	1 cut(s)	28
Cac8I	GCNNGC	3 cut(s)	40, 343, 1632
CaiI	CAGNNNCTG	1 cut(s)	1448
CciI	TCATGA	3 cut(s)	120, 426, 1045
CfoI	GCGC	3 cut(s)	347, 783, 1114
Cfr10I	RCCGGY	2 cut(s)	42, 574
CpoI	CGGWCCG	1 cut(s)	916
CseI	GACGC	2 cut(s)	421, 1551
CsiI	ACCWGGT	1 cut(s)	1364
Csp6I	GTAC	2 cut(s)	1489, 1799
CspI	CGGWCCG	1 cut(s)	916
CviQI	GTAC	2 cut(s)	1489, 1799
DdeI	CTNAG	3 cut(s)	1295, 1449, 1635
DpnI	GATC	8 cut(s)	14, 618, 633, 1001, 1044, 1061, 1233, 1554
DpnII	GATC	8 cut(s)	12, 616, 631, 999, 1042, 1059, 1231, 1552
DraIII	CACNNNGTG	1 cut(s)	1681
DriI	GACNNNNNGTC	1 cut(s)	229
EaeI	YGGCCR	3 cut(s)	111, 561, 1672
Eam1104I	CTCTTC	4 cut(s)	533, 755, 790, 980
Eam1105I	GACNNNNNGTC	1 cut(s)	229
EarI	CTCTTC	4 cut(s)	533, 755, 790, 980
EciI	GGCGGA	1 cut(s)	992
Ecl136II	GAGCTC	2 cut(s)	451, 652
Eco130I	CCWWGG	1 cut(s)	1242
Eco147I	AGGCCT	1 cut(s)	1241
Eco24I	GRGCYC	3 cut(s)	453, 654, 814
Eco31I	GGTCTC	2 cut(s)	1338, 1690
Eco47I	GGWCC	7 cut(s)	677, 802, 916, 1138, 1368, 1408, 1558
Eco47III	AGCGCT	1 cut(s)	782
Eco53kI	GAGCTC	2 cut(s)	451, 652
Eco72I	CACGTG	1 cut(s)	581
Eco88I	CYCGRG	3 cut(s)	359, 849, 1172
EcoICRI	GAGCTC	2 cut(s)	451, 652
EcoO109I	RGGNCCY	2 cut(s)	1558, 1643
EcoRI	GAATTC	2 cut(s)	138, 657
EcoRII	CCWGG	1 cut(s)	1364
EcoT14I	CCWWGG	1 cut(s)	1242
EcoT38I	GRGCYC	3 cut(s)	453, 654, 814
ErhI	CCWWGG	1 cut(s)	1242
Esp3I	CGTCTC	1 cut(s)	852
FaqI	GGGAC	2 cut(s)	376, 1492
FauI	CCCGC	1 cut(s)	1076
FbaI	TGATCA	2 cut(s)	631, 1042
Fnu4HI	GCNGC	3 cut(s)	639, 993, 1440
FokI	GGATG	2 cut(s)	1273, 1487
FriOI	GRGCYC	3 cut(s)	453, 654, 814
Fsp4HI	GCNGC	3 cut(s)	639, 993, 1440
FspBI	CTAG	4 cut(s)	512, 1430, 1499, 1509
GlaI	GCGC	3 cut(s)	346, 782, 1113
GluI	GCNGC	3 cut(s)	639, 993, 1440
GsaI	CCCAGC	3 cut(s)	351, 879, 1643
GsuI	CTGGAG	2 cut(s)	1722, 1777
HaeII	RGCGCY	1 cut(s)	784
HgaI	GACGC	2 cut(s)	421, 1551
HhaI	GCGC	3 cut(s)	347, 783, 1114
Hin6I	GCGC	3 cut(s)	345, 781, 1112
HinP1I	GCGC	3 cut(s)	345, 781, 1112
HincII	GTYRAC	1 cut(s)	1090
HindII	GTYRAC	1 cut(s)	1090
HindIII	AAGCTT	1 cut(s)	703
HphI	GGTGA	7 cut(s)	523, 593, 766, 866, 1049, 1350, 1772
Hpy166II	GTNNAC	8 cut(s)	48, 70, 608, 948, 1090, 1138, 1371, 1799
Hpy188I	TCNGA	7 cut(s)	17, 170, 183, 656, 1260, 1296, 1652
Hpy8I	GTNNAC	8 cut(s)	48, 70, 608, 948, 1090, 1138, 1371, 1799
Hpy99I	CGWCG	2 cut(s)	697, 1307
HpyAV	CCTTC	4 cut(s)	475, 547, 1282, 1307
HpyCH4III	ACNGT	8 cut(s)	192, 605, 693, 916, 1142, 1382, 1584, 1679
HpyCH4IV	ACGT	4 cut(s)	295, 365, 580, 845
HpyCH4V	TGCA	9 cut(s)	48, 197, 260, 506, 689, 760, 1127, 1442, 1756
HpyF3I	CTNAG	3 cut(s)	1295, 1449, 1635
HpySE526I	ACGT	4 cut(s)	295, 365, 580, 845
HspAI	GCGC	3 cut(s)	345, 781, 1112
Ksp22I	TGATCA	2 cut(s)	631, 1042
Kzo9I	GATC	8 cut(s)	12, 616, 631, 999, 1042, 1059, 1231, 1552
LguI	GCTCTTC	1 cut(s)	790
LmnI	GCTCC	9 cut(s)	55, 155, 448, 475, 657, 1080, 1107, 1458, 1741
Lsp1109I	GCAGC	1 cut(s)	1426
LweI	GCATC	1 cut(s)	269
MabI	ACCWGGT	1 cut(s)	1364
MaeI	CTAG	4 cut(s)	512, 1430, 1499, 1509
MaeII	ACGT	4 cut(s)	295, 365, 580, 845
MaeIII	GTNAC	1 cut(s)	910
MalI	GATC	8 cut(s)	14, 618, 633, 1001, 1044, 1061, 1233, 1554
MbiI	CCGCTC	1 cut(s)	1083
MboI	GATC	8 cut(s)	12, 616, 631, 999, 1042, 1059, 1231, 1552
MboII	GAAGA	8 cut(s)	157, 233, 364, 520, 742, 777, 780, 997
MfeI	CAATTG	1 cut(s)	1536
MhlI	GDGCHC	8 cut(s)	50, 426, 453, 654, 814, 1104, 1121, 1632
MlsI	TGGCCA	2 cut(s)	563, 1674
MluNI	TGGCCA	2 cut(s)	563, 1674
MlyI	GAGTC	4 cut(s)	165, 413, 506, 918
MmeI	TCCRAC	4 cut(s)	40, 829, 1238, 1630
Mox20I	TGGCCA	2 cut(s)	563, 1674
MroXI	GAANNNNTTC	1 cut(s)	142
MscI	TGGCCA	2 cut(s)	563, 1674
MseI	TTAA	6 cut(s)	89, 95, 206, 707, 837, 1281
Msp20I	TGGCCA	2 cut(s)	563, 1674
MspA1I	CMGCKG	1 cut(s)	629
MspR9I	CCNGG	4 cut(s)	115, 1179, 1274, 1366
MunI	CAATTG	1 cut(s)	1536
MvaI	CCWGG	1 cut(s)	1366
NciI	CCSGG	3 cut(s)	115, 1179, 1274
NdeII	GATC	8 cut(s)	12, 616, 631, 999, 1042, 1059, 1231, 1552
NlaIV	GGNNCC	2 cut(s)	1586, 1644
NmeAIII	GCCGAG	2 cut(s)	932, 1651
NmuCI	GTSAC	1 cut(s)	910
NspI	RCATGY	1 cut(s)	549
NspV	TTCGAA	1 cut(s)	721
PaeR7I	CTCGAG	2 cut(s)	849, 1172
PagI	TCATGA	3 cut(s)	120, 426, 1045
PceI	AGGCCT	1 cut(s)	1241
PciI	ACATGT	1 cut(s)	545
PciSI	GCTCTTC	1 cut(s)	790
PcsI	WCGNNNNNNNCGW	2 cut(s)	601, 847
PdmI	GAANNNNTTC	1 cut(s)	142
PfeI	GAWTC	6 cut(s)	355, 391, 585, 713, 1702, 1787
PflMI	CCANNNNNTGG	2 cut(s)	30, 1681
PkrI	GCNGC	3 cut(s)	640, 994, 1441
PleI	GAGTC	4 cut(s)	165, 412, 505, 917
PmaCI	CACGTG	1 cut(s)	581
PmlI	CACGTG	1 cut(s)	581
PpsI	GAGTC	4 cut(s)	165, 412, 505, 917
Ppu21I	YACGTR	2 cut(s)	296, 581
PpuMI	RGGWCCY	1 cut(s)	1558
PscI	ACATGT	1 cut(s)	545
PshBI	ATTAAT	1 cut(s)	206
PsiI	TTATAA	1 cut(s)	332
Psp124BI	GAGCTC	2 cut(s)	453, 654
Psp5II	RGGWCCY	1 cut(s)	1558
Psp6I	CCWGG	1 cut(s)	1364
PspCI	CACGTG	1 cut(s)	581
PspFI	CCCAGC	3 cut(s)	347, 875, 1639
PspGI	CCWGG	1 cut(s)	1364
PspN4I	GGNNCC	2 cut(s)	1586, 1644
PspPPI	RGGWCCY	1 cut(s)	1558
PsrI	GAACNNNNNNTAC	2 cut(s)	1757, 1789
PstI	CTGCAG	1 cut(s)	1444
PstNI	CAGNNNCTG	1 cut(s)	1448
PvuII	CAGCTG	1 cut(s)	629
RsaI	GTAC	2 cut(s)	1490, 1800
RsaNI	GTAC	2 cut(s)	1489, 1799
Rsr2I	CGGWCCG	1 cut(s)	916
RsrII	CGGWCCG	1 cut(s)	916
SacI	GAGCTC	2 cut(s)	453, 654
SapI	GCTCTTC	1 cut(s)	790
SaqAI	TTAA	6 cut(s)	89, 95, 206, 707, 837, 1281
SatI	GCNGC	3 cut(s)	639, 993, 1440
Sau3AI	GATC	8 cut(s)	12, 616, 631, 999, 1042, 1059, 1231, 1552
SchI	GAGTC	4 cut(s)	165, 413, 506, 918
ScrFI	CCNGG	4 cut(s)	115, 1179, 1274, 1366
SduI	GDGCHC	8 cut(s)	50, 426, 453, 654, 814, 1104, 1121, 1632
SexAI	ACCWGGT	1 cut(s)	1364
SfaNI	GCATC	1 cut(s)	269
SfcI	CTRYAG	2 cut(s)	892, 1440
Sfr274I	CTCGAG	2 cut(s)	849, 1172
SfuI	TTCGAA	1 cut(s)	721
SinI	GGWCC	7 cut(s)	677, 802, 916, 1138, 1368, 1408, 1558
SlaI	CTCGAG	2 cut(s)	849, 1172
SmlI	CTYRAG	2 cut(s)	849, 1172
SmoI	CTYRAG	2 cut(s)	849, 1172
SpeI	ACTAGT	1 cut(s)	1498
SseBI	AGGCCT	1 cut(s)	1241
SsiI	CCGC	8 cut(s)	248, 639, 930, 977, 992, 1083, 1604, 1727
SspI	AATATT	1 cut(s)	1516
SspMI	CTAG	4 cut(s)	512, 1430, 1499, 1509
SstI	GAGCTC	2 cut(s)	453, 654
StuI	AGGCCT	1 cut(s)	1241
StyD4I	CCNGG	4 cut(s)	113, 1177, 1272, 1364
StyI	CCWWGG	1 cut(s)	1242
TaaI	ACNGT	8 cut(s)	192, 605, 693, 916, 1142, 1382, 1584, 1679
TaiI	ACGT	4 cut(s)	298, 368, 583, 848
TaqI	TCGA	8 cut(s)	212, 721, 814, 841, 850, 1173, 1234, 1305
TaqII	GACCGA	2 cut(s)	1425, 1632
TatI	WGTACW	1 cut(s)	1798
TauI	GCSGC	2 cut(s)	641, 995
TfiI	GAWTC	6 cut(s)	355, 391, 585, 713, 1702, 1787
Tru1I	TTAA	6 cut(s)	89, 95, 206, 707, 837, 1281
Tru9I	TTAA	6 cut(s)	89, 95, 206, 707, 837, 1281
TscAI	CASTG	5 cut(s)	1134, 1449, 1552, 1746, 1801
TseFI	GTSAC	1 cut(s)	910
TseI	GCWGC	1 cut(s)	1439
Tsp45I	GTSAC	1 cut(s)	910
TspDTI	ATGAA	8 cut(s)	41, 109, 131, 443, 529, 662, 1782, 1800
TspGWI	ACGGA	1 cut(s)	1213
TspRI	CASTG	5 cut(s)	1134, 1449, 1552, 1746, 1801
Van91I	CCANNNNNTGG	2 cut(s)	30, 1681
VneI	GTGCAC	1 cut(s)	46
VpaK11BI	GGWCC	7 cut(s)	677, 802, 916, 1138, 1368, 1408, 1558
VspI	ATTAAT	1 cut(s)	206
XapI	RAATTY	2 cut(s)	138, 657
XceI	RCATGY	1 cut(s)	549
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1402
XhoI	CTCGAG	2 cut(s)	849, 1172
XmnI	GAANNNNTTC	1 cut(s)	142
XspI	CTAG	4 cut(s)	512, 1430, 1499, 1509

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.