Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr4

Orthogroup ID

OG0002802

Physical Location & Seq

Genomic Coordinates Reverse (-)

14088526 .. 14102201

Gene Structure 13676 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom04g11230.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2508 bp

ATGGCTCCGGTGAATATAACTTCAATCAAAACGGCATCAAGTGGATTATGGCAAGGTGATAATCCTCTACACTTCGCCTTCCCACTCTTAATCGTCCAAACCACCTTAATCATCGTCGTCAGCCGCTTCCTCGCCTTCCTTCTCAAACCCCTACACCAACCCAAAGTCATCGCCGAGATTGCTGGTGGAATATTGCTTGGGCCATCAGCCTTCGGAAAAAACAAATATTACCTACACAGAATATTTCCCTCATGGAGCACTCCAATACTCGAAACCGTGGCAAGCATTGGTCTTCTCTTTTTCTTGTTCCTCGTAGGCATTGAGCTCGATTTAAGCTCAGTCCGACGTCGTAGTGGAAGAAGCACTTTTGGCATAGCCCTCGCTGGCATATCGCTGCCCTTCCTATGTGGCATCGGCGTCGCTGTCATCCTCCGGAGAACGATCGACGGATCTGACAAAGCCGGCTTCAGTCAGTTCGTTGTGTTTATGGGAGTGTCACTTTCCATCACGGCCTTTCCAGTTCTCGCCCGCATTTTAGCAGAGCTCAAGCTTTTAACTACTAGGGTTGGCGAGATTGCCATGGCTGCTGCCGCTCTGAACGACGTCGCTGCATGGATCTTGCTCGCTGTCGCGGTGGCCTTGGCCGGTGACGGTGATGGTGGCCATAAGAAGAGCCCTTTGGTATCAATCTGGGTCCTCCTATCAGGTGTTGCATTTGTTGCTTTCATGATGGTGGTGATCCGACCGGCCATGAACTGGGTGGCCCGCCTGAGCTCTCCAGAGCAAAATGCAATAGACGAAGCCTATATATGCTTAACCCTAGCCGGAGTCATGGTATCCGGATTCATTACTGACCTAATTGGTATCCATTCTATATTTGGAGCCTTCGTCTTTGGTCTAACAATTCCCAAAGGAGGACAGTTTGCGGAAAGATTGATAGAGAGGATTGAGGACTTTGTGTCCGGCTTGTTGCTTCCTCTTTACTTTGCATCAAGTGGGTTGAAGACCGATGTAGCGAAAATACACGGAGGAGGGGCGTGGGGGCTGTTGGTGCTAGTTATATCGATCGCTTGTGCCGGGAAGATATTGGGGACGTTTGCGGTGGCAATGCTATTTATGATTCCGGCTACAGAATCGTTGACGCTCGGTGTGCTCATGAATACCAAAGGGTTGGTGGAGCTCATTGTTCTCAACGTTGGCAAGGAGAAAAAGGTGCTTAACGATGAGACATTTGCTATTCTAGTCCTCATGGCACTCTTCACCACCTTTATCACAAGTCCACTAGTGATGGCCATTTACAAGCCTGCACGTGGCATCTCAGTTCGCACTCATCGCAAGCTCCGTGATCTGTCAACCACTGTATCCTTCAAGGACGAACTTCGAGTCCTGGCGTGTGTGCATGGGCCTGCCAATGTGCCCTCACTCATTAGCCTTATTGAGTCCATCCGAAGTGGCAAGAAAGCGCAACTCAAACTCTTCCTCATGCACCTTGTGGAGCTCACTGATCGATCTTCTTCCATCATCATGGTCCAACAGGCTCGAAAGAACGGCTTTCCCTTCTTTAATAGATTCGGCCGAGGCGCCTGGAGCGACGGCGTTGTTTCCGCCTTCCAGTCCTATAGCCAACTGGGGCGAGTCTCGGTCCGACCCACAACTGCAATATCACCCATGTCCACAATGTACGAGGATGTTTGCCATACGGCGGAAGACCAGATGGTTGCGATAATCATCTTGCCATTCCACAAACAATGGAGGCGTGACGGCGATAATCATGAAGTGACGGAGATTGTGAGCCAGGCCTGGCGAGGGGTCAACCAGAGGGTGCTTCAAACTGCACCGTGCTCAGTTGCAGTGCTCGTGGATCGTGGATTTGGTAACACCGGAACCCAGCGGATTTGCATTGTGTTTTTTGGTGGGCCCGATGATCGGGAGGCCTTGGAGTTAGGCGGTAGGATGGCCGAACACCCGACAGTTAAAGTGACGGTTGTGAAATTTGTTGAGAAAGAGGGTTTGGAGAGTAATGGTCTCATGTTAAAACCTTATCCCTCCGAGTCTACCGAGAATAGCTATAGTTTCTCCACAGCTAAAATGGACCGAAAGAAAGAAAAGGAACTGGATGAGGAAGCAGTGGCTGAGTTCAGAAGCAAGTGGGATGGGAAAGTAGAGTGCGTAGAGAAGGTGGCAGCCAATAATATTGTGGAGGGGGTTTTGGCAATAGGAAGTAGTGGAGATCATGATCTGTTAATTGTAGGCAAAGGACGATTCCCGTCACGCATGGTAGCAGAACTGGCCGACCGCCATGCAGAGCATGCAGAGTTAGGCCCCATTGGAGACATATTGGCTTCATCAGGCCATGATGTGGTCTCATCAATGCTTGTGATTCAACAACATGACGTAGCTCATTCCGTGGAGGCTCCGGTGTTAAAGGTAGTGCATGGTGATTACCAGAGGTTCCTCGCAGATGAGTCCTCCAGTACTGTGCTTGAGATGTCTAAGGAATCTGTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006605 GO:0006623 GO:0006810 GO:0006811 GO:0006812 GO:0006873 GO:0006875 GO:0006885 GO:0006886 GO:0007034 GO:0008104 GO:0008150 GO:0009987 GO:0012505 GO:0015031 GO:0015672 GO:0015833 GO:0019725 GO:0030003 GO:0030004 GO:0030007 GO:0030104 GO:0033036 GO:0033365 GO:0034613 GO:0042592 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045184 GO:0046907 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055065 GO:0055067 GO:0055075 GO:0055080 GO:0055082 GO:0065007 GO:0065008 GO:0070727 GO:0071702 GO:0071705 GO:0072594 GO:0072665 GO:0072666 GO:0098771

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Na_H_Exchanger

Protein Analysis

836

Amino Acids

90.47

Weight (kDa)

7.68

Isoelectric Point (pI)

38.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Na_H_Exchanger	PF00999	42 - 429	1.9e-58	Sodium/hydrogen exchanger, transmembrane
CHX17_2nd	PF23256	489 - 626	1.5e-35	Plant cation/H(+) antiporter domain
CHX17_C	PF23259	632 - 797	2.3e-12	Plant cation/H(+) antiporter, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002802)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G53720 AT3G53720
fragaria_vesca	FvH4_6g14141 FvH4_6g14141 FvH4_6g14150
malus_domestica	MD04G1124400.v1.1 MD04G1124500.v1.1 MD04G1124700.v1.1 MD12G1139700.v1.1
prunus_persica	Prupe.6G251600_v2.0.a1 Prupe.6G251700_v2.0.a1 Prupe.6G251700_v2.0.a1
pyrus_communis	pycom04g11220 pycom04g11230 pycom12g13420
rosa_chinensis	RchiOBHm_Chr3g0467061 RchiOBHm_Chr3g0467081 RchiOBHm_Chr3g0467091
rosa_laevigata	RLG00000024527 RLG00000024528 RLG00000024532
rosa_multiflora	Rmu_co8287377.1_g000001 Rmu_co8419643.1_g000001 Rmu_sc0012393.1_g000001 Rmu_ssc0000065.1_g000004
rosa_roxburghii	Rroxscaffold_6G00413900 Rroxscaffold_6G00413920
rosa_rugosa	Rorug03G0085100 Rorug03G0085400
rosa_samantha	Rh3AG133100 Rh3AG133400 Rh3BG154200 Rh3BG154600 Rh3CG154200 Rh3CG154300 Rh3DG155200 Rh3DG155400
rosa_wichuraiana	Rw3G012600 Rw3G012610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	349, 606
AccB1I	GGYRCC	1 cut(s)	1580
AccB7I	CCANNNNNTGG	2 cut(s)	756, 2359
AccBSI	CCGCTC	1 cut(s)	593
AccI	GTMKAC	1 cut(s)	2054
AccII	CGCG	1 cut(s)	632
AccIII	TCCGGA	2 cut(s)	432, 839
AclI	AACGTT	1 cut(s)	1194
AclWI	GGATC	4 cut(s)	457, 623, 733, 1869
AcoI	YGGCCR	7 cut(s)	642, 661, 747, 1290, 1573, 1956, 2289
AcsI	RAATTY	1 cut(s)	1991
AcuI	CTGAAG	1 cut(s)	451
AcvI	CACGTG	1 cut(s)	1310
AcyI	GRCGYC	4 cut(s)	346, 417, 603, 1581
AdeI	CACNNNGTG	1 cut(s)	1492
AfaI	GTAC	2 cut(s)	1682, 2476
AfiI	CCNNNNNNNGG	7 cut(s)	756, 914, 1310, 1702, 1806, 1926, 2359
AgsI	TTSAA	5 cut(s)	24, 1003, 1369, 1829, 2384
AhdI	GACNNNNNGTC	1 cut(s)	958
AhlI	ACTAGT	1 cut(s)	1282
AjnI	CCWGG	4 cut(s)	1386, 1583, 1794, 1799
AjuI	GAANNNNNNNTTGG	4 cut(s)	662, 694, 1994, 2026
AloI	GAACNNNNNNTCC	2 cut(s)	1368, 1400
Alw21I	GWGCWC	9 cut(s)	260, 327, 546, 776, 1155, 1182, 1500, 1844, 1857
Alw26I	GTCTC	5 cut(s)	1220, 1642, 2030, 2325, 2368
AlwI	GGATC	4 cut(s)	457, 623, 733, 1869
AlwNI	CAGNNNCTG	1 cut(s)	2132
Aor13HI	TCCGGA	2 cut(s)	432, 839
ApaI	GGGCCC	1 cut(s)	1920
ApeKI	GCWGC	5 cut(s)	394, 584, 587, 608, 2183
ApoI	RAATTY	1 cut(s)	1991
ArsI	GACNNNNNNTTYG	2 cut(s)	1368, 1400
AspLEI	GCGC	2 cut(s)	1465, 1583
AsuC2I	CCSGG	1 cut(s)	1078
AsuHPI	GGTGA	8 cut(s)	22, 68, 659, 665, 748, 1252, 1656, 2450
AvaII	GGWCC	4 cut(s)	694, 1528, 1642, 2092
BaeGI	GKGCMC	2 cut(s)	1419, 1920
BaeI	ACNNNNGTAYC	2 cut(s)	1344, 1377
BalI	TGGCCA	2 cut(s)	663, 1292
BanI	GGYRCC	1 cut(s)	1580
BanII	GRGCYC	7 cut(s)	327, 546, 677, 776, 1182, 1500, 1920
BauI	CACGAG	1 cut(s)	1856
BbrPI	CACGTG	1 cut(s)	1310
BbsI	GAAGAC	3 cut(s)	284, 1010, 1713
Bbv12I	GWGCWC	9 cut(s)	260, 327, 546, 776, 1155, 1182, 1500, 1844, 1857
BbvI	GCAGC	5 cut(s)	381, 571, 574, 595, 2195
BceAI	ACGGC	6 cut(s)	48, 525, 1564, 1609, 1716, 1777
BciT130I	CCWGG	4 cut(s)	1388, 1585, 1796, 1801
BciVI	GTATCC	3 cut(s)	847, 875, 1372
BcnI	CCSGG	1 cut(s)	1078
BcoDI	GTCTC	5 cut(s)	1220, 1642, 2030, 2325, 2368
BcuI	ACTAGT	1 cut(s)	1282
BfaI	CTAG	5 cut(s)	561, 821, 1055, 1241, 1283
BfmI	CTRYAG	3 cut(s)	1128, 1618, 2068
BfoI	RGCGCY	1 cut(s)	1584
BfuI	GTATCC	3 cut(s)	847, 875, 1372
BisI	GCNGC	7 cut(s)	124, 395, 585, 588, 591, 609, 2184
BlsI	GCNGC	7 cut(s)	125, 396, 586, 589, 592, 610, 2185
BmcAI	AGTACT	1 cut(s)	2476
Bme1390I	CCNGG	5 cut(s)	1078, 1388, 1585, 1796, 1801
Bme18I	GGWCC	4 cut(s)	694, 1528, 1642, 2092
BmeRI	GACNNNNNGTC	1 cut(s)	958
BmiI	GGNNCC	9 cut(s)	6, 695, 883, 1582, 1885, 1918, 2323, 2415, 2453
BmrFI	CCNGG	5 cut(s)	1078, 1388, 1585, 1796, 1801
BmrI	ACTGGG	2 cut(s)	766, 1637
BmsI	GCATC	4 cut(s)	44, 420, 998, 1323
BmuI	ACTGGG	2 cut(s)	766, 1637
BpiI	GAAGAC	3 cut(s)	284, 1010, 1713
BpmI	CTGGAG	3 cut(s)	762, 1606, 2455
Bpu10I	CCTNAGC	1 cut(s)	770
BpuEI	CTTGAG	2 cut(s)	530, 2504
BpuMI	CCSGG	1 cut(s)	1078
Bsa29I	ATCGAT	2 cut(s)	1064, 1507
BsaAI	YACGTR	1 cut(s)	1310
BsaBI	GATNNNNATC	2 cut(s)	1727, 2235
BsaHI	GRCGYC	4 cut(s)	346, 417, 603, 1581
BsaI	GGTCTC	2 cut(s)	2030, 2368
BsaJI	CCNNGG	6 cut(s)	276, 579, 639, 1576, 1935, 2406
BsaWI	WCCGGW	5 cut(s)	7, 432, 839, 1880, 2416
BsaXI	ACNNNNNCTCC	4 cut(s)	819, 849, 873, 903
Bsc4I	CCNNNNNNNGG	7 cut(s)	756, 914, 1310, 1702, 1806, 1926, 2359
Bse118I	RCCGGY	3 cut(s)	461, 644, 745
Bse1I	ACTGG	7 cut(s)	518, 761, 1612, 1632, 2118, 2292, 2472
Bse3DI	GCAATG	1 cut(s)	1113
Bse8I	GATNNNNATC	2 cut(s)	1727, 2235
BseAI	TCCGGA	2 cut(s)	432, 839
BseBI	CCWGG	4 cut(s)	1388, 1585, 1796, 1801
BseCI	ATCGAT	2 cut(s)	1064, 1507
BseDI	CCNNGG	6 cut(s)	276, 579, 639, 1576, 1935, 2406
BseGI	GGATG	6 cut(s)	426, 1443, 1693, 1959, 2122, 2158
BseJI	GATNNNNATC	2 cut(s)	1727, 2235
BseLI	CCNNNNNNNGG	7 cut(s)	756, 914, 1310, 1702, 1806, 1926, 2359
BseMI	GCAATG	1 cut(s)	1113
BseMII	CTCAG	5 cut(s)	351, 761, 1332, 1857, 2124
BseNI	ACTGG	7 cut(s)	518, 761, 1612, 1632, 2118, 2292, 2472
BseRI	GAGGAG	1 cut(s)	1044
BseSI	GKGCMC	2 cut(s)	1419, 1920
BseX3I	CGGCCG	1 cut(s)	1573
BseXI	GCAGC	5 cut(s)	381, 571, 574, 595, 2195
BseYI	CCCAGC	1 cut(s)	1887
BsgI	GTGCAG	2 cut(s)	1290, 1818
Bsh1236I	CGCG	1 cut(s)	632
Bsh1285I	CGRYCG	5 cut(s)	444, 746, 1068, 1576, 2296
BshNI	GGYRCC	1 cut(s)	1580
BshVI	ATCGAT	2 cut(s)	1064, 1507
BsiEI	CGRYCG	5 cut(s)	444, 746, 1068, 1576, 2296
BsiHKAI	GWGCWC	9 cut(s)	260, 327, 546, 776, 1155, 1182, 1500, 1844, 1857
BslFI	GGGAC	1 cut(s)	1105
BslI	CCNNNNNNNGG	7 cut(s)	756, 914, 1310, 1702, 1806, 1926, 2359
BsmAI	GTCTC	5 cut(s)	1220, 1642, 2030, 2325, 2368
BsmFI	GGGAC	1 cut(s)	1105
Bso31I	GGTCTC	2 cut(s)	2030, 2368
Bsp120I	GGGCCC	1 cut(s)	1916
Bsp13I	TCCGGA	2 cut(s)	432, 839
Bsp19I	CCATGG	1 cut(s)	579
BspCNI	CTCAG	5 cut(s)	350, 762, 1331, 1856, 2125
BspDI	ATCGAT	2 cut(s)	1064, 1507
BspEI	TCCGGA	2 cut(s)	432, 839
BspFNI	CGCG	1 cut(s)	632
BspHI	TCATGA	4 cut(s)	726, 1155, 1771, 2233
BspLI	GGNNCC	9 cut(s)	6, 695, 883, 1582, 1885, 1918, 2323, 2415, 2453
BspPI	GGATC	4 cut(s)	457, 623, 733, 1869
BspQI	GCTCTTC	1 cut(s)	665
BspT107I	GGYRCC	1 cut(s)	1580
BspTNI	GGTCTC	2 cut(s)	2030, 2368
BsrBI	CCGCTC	1 cut(s)	593
BsrDI	GCAATG	1 cut(s)	1113
BsrFI	RCCGGY	3 cut(s)	461, 644, 745
BsrI	ACTGG	7 cut(s)	518, 761, 1612, 1632, 2118, 2292, 2472
BssAI	RCCGGY	3 cut(s)	461, 644, 745
BssECI	CCNNGG	6 cut(s)	276, 579, 639, 1576, 1935, 2406
BssNI	GRCGYC	4 cut(s)	346, 417, 603, 1581
BssSI	CACGAG	1 cut(s)	1856
BssT1I	CCWWGG	3 cut(s)	579, 639, 1935
Bst2BI	CACGAG	1 cut(s)	1856
Bst2UI	CCWGG	4 cut(s)	1388, 1585, 1796, 1801
Bst4CI	ACNGT	8 cut(s)	277, 653, 921, 1360, 1839, 1972, 1984, 2479
Bst6I	CTCTTC	3 cut(s)	665, 1262, 1481
BstACI	GRCGYC	4 cut(s)	346, 417, 603, 1581
BstAPI	GCANNNNNTGC	2 cut(s)	719, 2309
BstBAI	YACGTR	1 cut(s)	1310
BstDEI	CTNAG	6 cut(s)	337, 770, 1318, 1843, 2133, 2493
BstDSI	CCRYGG	3 cut(s)	276, 579, 2406
BstF5I	GGATG	6 cut(s)	426, 1443, 1693, 1959, 2122, 2158
BstFNI	CGCG	1 cut(s)	632
BstH2I	RGCGCY	1 cut(s)	1584
BstHHI	GCGC	2 cut(s)	1465, 1583
BstMAI	GTCTC	5 cut(s)	1220, 1642, 2030, 2325, 2368
BstMCI	CGRYCG	5 cut(s)	444, 746, 1068, 1576, 2296
BstNI	CCWGG	4 cut(s)	1388, 1585, 1796, 1801
BstNSI	RCATGY	1 cut(s)	2312
BstSCI	CCNGG	5 cut(s)	1076, 1386, 1583, 1794, 1799
BstSFI	CTRYAG	3 cut(s)	1128, 1618, 2068
BstSLI	GKGCMC	2 cut(s)	1419, 1920
BstUI	CGCG	1 cut(s)	632
BstV1I	GCAGC	5 cut(s)	381, 571, 574, 595, 2195
BstV2I	GAAGAC	3 cut(s)	284, 1010, 1713
BstX2I	RGATCY	2 cut(s)	449, 615
BstXI	CCANNNNNNTGG	2 cut(s)	1171, 1525
BstYI	RGATCY	2 cut(s)	449, 615
BstZI	CGGCCG	1 cut(s)	1573
Bsu15I	ATCGAT	2 cut(s)	1064, 1507
BsuI	GTATCC	3 cut(s)	847, 875, 1372
BsuTUI	ATCGAT	2 cut(s)	1064, 1507
BtgI	CCRYGG	3 cut(s)	276, 579, 2406
BtgZI	GCGATG	2 cut(s)	154, 1316
BtsCI	GGATG	6 cut(s)	426, 1443, 1693, 1959, 2122, 2158
BtsI	GCAGTG	2 cut(s)	1857, 2133
BtsIMutI	CAGTG	4 cut(s)	1356, 1500, 1857, 2133
CaiI	CAGNNNCTG	1 cut(s)	2132
CciI	TCATGA	4 cut(s)	726, 1155, 1771, 2233
CfoI	GCGC	2 cut(s)	1465, 1583
Cfr10I	RCCGGY	3 cut(s)	461, 644, 745
ClaI	ATCGAT	2 cut(s)	1064, 1507
CpoI	CGGWCCG	1 cut(s)	1642
CseI	GACGC	2 cut(s)	406, 1150
Csp6I	GTAC	2 cut(s)	1681, 2475
CspI	CGGWCCG	1 cut(s)	1642
CviQI	GTAC	2 cut(s)	1681, 2475
DdeI	CTNAG	6 cut(s)	337, 770, 1318, 1843, 2133, 2493
DinI	GGCGCC	1 cut(s)	1582
DraIII	CACNNNGTG	1 cut(s)	1492
DriI	GACNNNNNGTC	1 cut(s)	958
EaeI	YGGCCR	7 cut(s)	642, 661, 747, 1290, 1573, 1956, 2289
EagI	CGGCCG	1 cut(s)	1573
Eam1104I	CTCTTC	3 cut(s)	665, 1262, 1481
Eam1105I	GACNNNNNGTC	1 cut(s)	958
EarI	CTCTTC	3 cut(s)	665, 1262, 1481
EciI	GGCGGA	2 cut(s)	1594, 1718
Ecl136II	GAGCTC	5 cut(s)	325, 544, 774, 1180, 1498
EclXI	CGGCCG	1 cut(s)	1573
Eco130I	CCWWGG	3 cut(s)	579, 639, 1935
Eco147I	AGGCCT	2 cut(s)	1799, 1934
Eco24I	GRGCYC	7 cut(s)	327, 546, 677, 776, 1182, 1500, 1920
Eco31I	GGTCTC	2 cut(s)	2030, 2368
Eco47I	GGWCC	4 cut(s)	694, 1528, 1642, 2092
Eco52I	CGGCCG	1 cut(s)	1573
Eco53kI	GAGCTC	5 cut(s)	325, 544, 774, 1180, 1498
Eco57I	CTGAAG	1 cut(s)	451
Eco72I	CACGTG	1 cut(s)	1310
EcoICRI	GAGCTC	5 cut(s)	325, 544, 774, 1180, 1498
EcoO109I	RGGNCCY	2 cut(s)	694, 2321
EcoRII	CCWGG	4 cut(s)	1386, 1583, 1794, 1799
EcoT14I	CCWWGG	3 cut(s)	579, 639, 1935
EcoT38I	GRGCYC	7 cut(s)	327, 546, 677, 776, 1182, 1500, 1920
EgeI	GGCGCC	1 cut(s)	1582
EheI	GGCGCC	1 cut(s)	1582
ErhI	CCWWGG	3 cut(s)	579, 639, 1935
FalI	AAGNNNNNCTT	4 cut(s)	349, 381, 1535, 1567
FaqI	GGGAC	1 cut(s)	1105
FauI	CCCGC	2 cut(s)	536, 773
FblI	GTMKAC	1 cut(s)	2054
Fnu4HI	GCNGC	7 cut(s)	124, 395, 585, 588, 591, 609, 2184
FokI	GGATG	6 cut(s)	413, 1430, 1700, 1966, 2129, 2165
FriOI	GRGCYC	7 cut(s)	327, 546, 677, 776, 1182, 1500, 1920
Fsp4HI	GCNGC	7 cut(s)	124, 395, 585, 588, 591, 609, 2184
FspBI	CTAG	5 cut(s)	561, 821, 1055, 1241, 1283
GlaI	GCGC	2 cut(s)	1464, 1582
GluI	GCNGC	7 cut(s)	124, 395, 585, 588, 591, 609, 2184
GsaI	CCCAGC	1 cut(s)	1891
GsuI	CTGGAG	3 cut(s)	762, 1606, 2455
HaeII	RGCGCY	1 cut(s)	1584
HgaI	GACGC	2 cut(s)	406, 1150
HhaI	GCGC	2 cut(s)	1465, 1583
Hin1I	GRCGYC	4 cut(s)	346, 417, 603, 1581
Hin6I	GCGC	2 cut(s)	1463, 1581
HinP1I	GCGC	2 cut(s)	1463, 1581
HincII	GTYRAC	3 cut(s)	1140, 1353, 1813
HindII	GTYRAC	3 cut(s)	1140, 1353, 1813
HindIII	AAGCTT	1 cut(s)	548
HphI	GGTGA	8 cut(s)	22, 68, 659, 665, 748, 1252, 1656, 2450
Hpy166II	GTNNAC	6 cut(s)	1140, 1280, 1353, 1674, 1813, 2055
Hpy188I	TCNGA	9 cut(s)	215, 344, 454, 597, 743, 1448, 1646, 2050, 2141
Hpy188III	TCNNGA	8 cut(s)	433, 727, 779, 840, 1156, 1772, 1928, 2234
Hpy8I	GTNNAC	6 cut(s)	1140, 1280, 1353, 1674, 1813, 2055
Hpy99I	CGWCG	8 cut(s)	119, 348, 351, 422, 449, 605, 608, 1595
HpyCH4III	ACNGT	8 cut(s)	277, 653, 921, 1360, 1839, 1972, 1984, 2479
HpyCH4IV	ACGT	6 cut(s)	346, 603, 1094, 1194, 1309, 2394
HpyF3I	CTNAG	6 cut(s)	337, 770, 1318, 1843, 2133, 2493
HpySE526I	ACGT	6 cut(s)	346, 603, 1094, 1194, 1309, 2394
Hsp92I	GRCGYC	4 cut(s)	346, 417, 603, 1581
HspAI	GCGC	2 cut(s)	1463, 1581
KasI	GGCGCC	1 cut(s)	1580
Kpn2I	TCCGGA	2 cut(s)	432, 839
KroI	GCCGGC	1 cut(s)	461
KroNI	GCCGGC	1 cut(s)	463
LguI	GCTCTTC	1 cut(s)	665
LmnI	GCTCC	8 cut(s)	10, 255, 881, 1177, 1344, 1495, 1587, 2419
Lsp1109I	GCAGC	5 cut(s)	381, 571, 574, 595, 2195
LweI	GCATC	4 cut(s)	44, 420, 998, 1323
MaeI	CTAG	5 cut(s)	561, 821, 1055, 1241, 1283
MaeII	ACGT	6 cut(s)	346, 603, 1094, 1194, 1309, 2394
MaeIII	GTNAC	7 cut(s)	495, 647, 1757, 1777, 1874, 1978, 2268
MbiI	CCGCTC	1 cut(s)	593
MflI	RGATCY	2 cut(s)	449, 615
MlsI	TGGCCA	2 cut(s)	663, 1292
MluCI	AATT	4 cut(s)	858, 903, 1991, 2244
MluNI	TGGCCA	2 cut(s)	663, 1292
Mly113I	GGCGCC	1 cut(s)	1581
MlyI	GAGTC	6 cut(s)	837, 1392, 1448, 1644, 2060, 2474
MmeI	TCCRAC	4 cut(s)	367, 766, 1555, 1669
Mox20I	TGGCCA	2 cut(s)	663, 1292
MroI	TCCGGA	2 cut(s)	432, 839
MroNI	GCCGGC	1 cut(s)	461
MscI	TGGCCA	2 cut(s)	663, 1292
MslI	CAYNNNNRTG	2 cut(s)	731, 1523
Msp20I	TGGCCA	2 cut(s)	663, 1292
MspA1I	CMGCKG	1 cut(s)	1891
MspR9I	CCNGG	5 cut(s)	1078, 1388, 1585, 1796, 1801
MvaI	CCWGG	4 cut(s)	1388, 1585, 1796, 1801
MvnI	CGCG	1 cut(s)	632
NaeI	GCCGGC	1 cut(s)	463
NarI	GGCGCC	1 cut(s)	1581
NciI	CCSGG	1 cut(s)	1078
NcoI	CCATGG	1 cut(s)	579
NgoMIV	GCCGGC	1 cut(s)	461
NlaIV	GGNNCC	9 cut(s)	6, 695, 883, 1582, 1885, 1918, 2323, 2415, 2453
NmeAIII	GCCGAG	2 cut(s)	199, 1601
NmuCI	GTSAC	6 cut(s)	495, 647, 1757, 1777, 1978, 2268
NspI	RCATGY	1 cut(s)	2312
PaeI	GCATGC	1 cut(s)	2312
PagI	TCATGA	4 cut(s)	726, 1155, 1771, 2233
PceI	AGGCCT	2 cut(s)	1799, 1934
PciSI	GCTCTTC	1 cut(s)	665
PcsI	WCGNNNNNNNCGW	1 cut(s)	1339
PdiI	GCCGGC	1 cut(s)	463
PfeI	GAWTC	7 cut(s)	843, 1120, 1133, 1569, 2262, 2380, 2498
PflMI	CCANNNNNTGG	2 cut(s)	756, 2359
PkrI	GCNGC	7 cut(s)	125, 396, 586, 589, 592, 610, 2185
Ple19I	CGATCG	2 cut(s)	444, 1068
PleI	GAGTC	6 cut(s)	836, 1391, 1447, 1643, 2059, 2473
PluTI	GGCGCC	1 cut(s)	1584
PmaCI	CACGTG	1 cut(s)	1310
PmlI	CACGTG	1 cut(s)	1310
PpsI	GAGTC	6 cut(s)	836, 1391, 1447, 1643, 2059, 2473
Ppu21I	YACGTR	1 cut(s)	1310
PpuMI	RGGWCCY	1 cut(s)	694
Psp124BI	GAGCTC	5 cut(s)	327, 546, 776, 1182, 1500
Psp1406I	AACGTT	1 cut(s)	1194
Psp5II	RGGWCCY	1 cut(s)	694
Psp6I	CCWGG	4 cut(s)	1386, 1583, 1794, 1799
PspCI	CACGTG	1 cut(s)	1310
PspFI	CCCAGC	1 cut(s)	1887
PspGI	CCWGG	4 cut(s)	1386, 1583, 1794, 1799
PspN4I	GGNNCC	9 cut(s)	6, 695, 883, 1582, 1885, 1918, 2323, 2415, 2453
PspOMI	GGGCCC	1 cut(s)	1916
PspPPI	RGGWCCY	1 cut(s)	694
PstNI	CAGNNNCTG	1 cut(s)	2132
PsuI	RGATCY	2 cut(s)	449, 615
PvuI	CGATCG	2 cut(s)	444, 1068
RsaI	GTAC	2 cut(s)	1682, 2476
RsaNI	GTAC	2 cut(s)	1681, 2475
RseI	CAYNNNNRTG	2 cut(s)	731, 1523
Rsr2I	CGGWCCG	1 cut(s)	1642
RsrII	CGGWCCG	1 cut(s)	1642
SacI	GAGCTC	5 cut(s)	327, 546, 776, 1182, 1500
SapI	GCTCTTC	1 cut(s)	665
SatI	GCNGC	7 cut(s)	124, 395, 585, 588, 591, 609, 2184
ScaI	AGTACT	1 cut(s)	2476
SchI	GAGTC	6 cut(s)	837, 1392, 1448, 1644, 2060, 2474
ScrFI	CCNGG	5 cut(s)	1078, 1388, 1585, 1796, 1801
SfaNI	GCATC	4 cut(s)	44, 420, 998, 1323
SfcI	CTRYAG	3 cut(s)	1128, 1618, 2068
SfoI	GGCGCC	1 cut(s)	1582
SinI	GGWCC	4 cut(s)	694, 1528, 1642, 2092
SmiMI	CAYNNNNRTG	2 cut(s)	731, 1523
SmlI	CTYRAG	2 cut(s)	545, 2483
SmoI	CTYRAG	2 cut(s)	545, 2483
SpeI	ACTAGT	1 cut(s)	1282
SphI	GCATGC	1 cut(s)	2312
Sse9I	AATT	4 cut(s)	858, 903, 1991, 2244
SseBI	AGGCCT	2 cut(s)	1799, 1934
SspDI	GGCGCC	1 cut(s)	1580
SspI	AATATT	4 cut(s)	192, 227, 243, 2194
SspMI	CTAG	5 cut(s)	561, 821, 1055, 1241, 1283
SstI	GAGCTC	5 cut(s)	327, 546, 776, 1182, 1500
StuI	AGGCCT	2 cut(s)	1799, 1934
StyD4I	CCNGG	5 cut(s)	1076, 1386, 1583, 1794, 1799
StyI	CCWWGG	3 cut(s)	579, 639, 1935
TaaI	ACNGT	8 cut(s)	277, 653, 921, 1360, 1839, 1972, 1984, 2479
TaiI	ACGT	6 cut(s)	349, 606, 1097, 1197, 1312, 2397
TaqI	TCGA	7 cut(s)	270, 327, 444, 1064, 1381, 1507, 1540
TaqII	GACCGA	3 cut(s)	1022, 1630, 2109
TasI	AATT	4 cut(s)	858, 903, 1991, 2244
TatI	WGTACW	1 cut(s)	2474
TauI	GCSGC	2 cut(s)	126, 593
TfiI	GAWTC	7 cut(s)	843, 1120, 1133, 1569, 2262, 2380, 2498
TscAI	CASTG	4 cut(s)	1363, 1507, 1857, 2133
TseFI	GTSAC	6 cut(s)	495, 647, 1757, 1777, 1978, 2268
TseI	GCWGC	5 cut(s)	394, 584, 587, 608, 2183
Tsp45I	GTSAC	6 cut(s)	495, 647, 1757, 1777, 1978, 2268
TspDTI	ATGAA	6 cut(s)	715, 767, 835, 1172, 1788, 2334
TspGWI	ACGGA	5 cut(s)	462, 1041, 1331, 1796, 2395
TspRI	CASTG	4 cut(s)	1363, 1507, 1857, 2133
Van91I	CCANNNNNTGG	2 cut(s)	756, 2359
VpaK11BI	GGWCC	4 cut(s)	694, 1528, 1642, 2092
XapI	RAATTY	1 cut(s)	1991
XceI	RCATGY	1 cut(s)	2312
XcmI	CCANNNNNNNNNTGG	5 cut(s)	757, 875, 1171, 2086, 2194
XmiI	GTMKAC	1 cut(s)	2054
XspI	CTAG	5 cut(s)	561, 821, 1055, 1241, 1283
ZraI	GACGTC	2 cut(s)	347, 604
ZrmI	AGTACT	1 cut(s)	2476

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.