FvH4_6g18620

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0001542
Physical Location & Seq
Reverse (-)
12293543 .. 12295630
2088 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g18620.t1

Sequence Viewer

Length: 2088 bp
ATGAGTTTTCAAACCTTGCGCCGTTTTGGCGGCCAAATTCTGAAAGAGGAGTCCACATCCACCTTGGCTCAAGTAATCCAAACCTACGCAAAAACCAAGCAGCTACACAAAGGCAAGCAGCTCCACGCTCACCTCCTACGCTCTCATTACCCACTATGCATTTTCCTAACCAACCACCTCCTCAACATGTACTCCAAATGTGGCCACGTCGACTACGCCCTCAAGGTTTTCGACGAAATGCCTCACAGAAACTTGGTTTCCTGGACTGCCATGGTAACCGGGTTTTCGCAGAACGCGAGGTTCTCGGAGTGCTTCAAGGCCTTTTCGGAGATGAGAAGAGCTGGGGAGAGCCCGACCCAGTTTGCATTTGCGAGTGTGATTAAAGGTTGTGTGGTTCTTGGGTCGGTTGAGATGGGGAGGCAGCTGCATTGTCTTGCTTTGAAATTGGGTTTGTCTTGTGAGTTGTTTGTGGGGAGTAACTTGGCGGATATGTATTCGAAATGTGGGGTGATGGTTGATTCTTGTAGGGTTTTTGAGGAGATGCCGTGTAAGGATGCTGTGTCGTGGACTTCGATGATTGATGGGTATGCAAAGAGTGGGGAGTTTGAGGCGGCTTTAGTGAGTTATAAGAGAATGATTAATGATGGGATTGGTGTAGATAAATATGTTGTTTCTAGTGCATTGAGTGCTTGTTCTGCACTGAGGGATTGTCAGTTTGGAAAGTGTGTTCATTCGACGGTTGTGAAGTTGGGATTGGAAGTGGAGGTGGCTGTGGGAAATGCTCTAGTTGATATGTACTCGAAATCAGGAGATATGGAGAGTGCTTCAAATGTGTTTCGGATTGACCCTGAGCGGAGAAATATTGTGTCGTATTCCTCTCTGATCAATGGTTATGTCGAGATGGATGAAATCGAGAAGGCTTTTAGTGTGTTTGTGGACTTACAGAGGGAGGGAGTTGAGCCTAATCAGTTCACTTTCTCTAGCTTGGTCAAGGCCTGTGCCAACCAAGCAGCACTTGAACAAGGGATCCAACTTCATGCTCAGGTGGTCAAGTTTAAATTTGATAGAGACGATTTTGTGGTTTCTGTTCTTGTTGATATGTATGGAAAATGTGGGTTGCTTGATCATTCAATACAAGTGTTTAATGAGGTAGCCACTCCGACTGAAGTAGCATGGAATTCGTTGTTAAGTGTATTTGCAGTTCATGGCTTAGGAAATGATGCCTTGAAAACTTTTAGTAGAATGGTCCAAGCAGGAGTGAAACCAAATGCAATAACATTTGTCAGTCTTTTAACAGGGTGTAGCCATGCTGGATTGGTAAAGGAAGGTTTAAAGTACTTTTACTCCATGGAGAAAACATATGGAATAGTACCTAGAGCTGGACATTACTCTTGCATTATTGATTTACTTGGCCGGGCTGGAAGGCTTGAAGAGGCAGAAGAATTTATTAACAGCATGCCATTGCAGCCAAATGCTTTTGGGTGGTGCTCTTTTCTCGGTGCTTGCACAATCCATGGTGATAAAGAGAGGGGGAAACTGGCAGCTGAGAAATTGATACAGCTCGAACCTGAGAACAGTGGAGCACATGTTTTGCTTTCAACTCTGCACGCGAAGGAGAAAAAATGGGATGATTTCAGAATTGTGAGGAAGATGATGAGAGACAGCAGCATGAAGAAACTGCCCGGTTATAGTTGGGTTGATGTTGGAAACAAAACACACACATTTGGAGCCAAGGATTGGTCTCATTCTCAGAAAAAAGAAATATATGAGAAACTTGATAGTCTTCTTGATCAGATAAAGAAAGTTGGGTATGTTCCAAATACAGATCTTGTTCTACATGATATGGACGACAATTCAAAGGTAGAGCTGCTTCACCATCATAGTGAGAGGATAGCCATTGCATTTGCACTGATAAGTATGCCTGCCGGGAAGCCAATCATTGTGAAGAAAAATATAAGGGTGTGTTTGGATTGCCATTCTGCAATCAAGTACATCTCCTTAGTTGTTGGAAGGAAGATTATTGTTAGGGATAATACCCGGTTTCACCATTTCGCAGATGGCTTGTGTTCATGCGGGGATTACTGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR PPR_2

Protein Analysis

696

Amino Acids

77.54

Weight (kDa)

7.94

Isoelectric Point (pI)

31.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 84 - 130 3.9e-08 PPR repeat family
PPR_2 PF13041 185 - 231 1.2e-06 PPR repeat family
PPR PF01535 187 - 217 5.6e-07 PPR repeat
PPR_2 PF13041 286 - 335 7.5e-14 PPR repeat family
PPR_3 PF13812 287 - 335 3.3e-06 Pentatricopeptide repeat domain
PPR_2 PF13041 387 - 435 3.7e-11 PPR repeat family
E_motif PF20431 505 - 567 3.6e-16 E motif
Eplus_motif PF20430 572 - 599 9.6e-07 E+ motif
DYW_deaminase PF14432 603 - 695 1.4e-39 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 627
AccB7I CCANNNNNTGG 1 cut(s) 1737
AccBSI CCGCTC 1 cut(s) 853
AccI GTMKAC 1 cut(s) 210
AccII CGCG 2 cut(s) 296, 1610
AciI CCGC 5 cut(s) 30, 485, 611, 853, 2073
AclWI GGATC 2 cut(s) 1021, 1034
AcoI YGGCCR 3 cut(s) 31, 202, 1411
AcsI RAATTY 4 cut(s) 36, 1058, 1177, 1442
AcuI CTGAAG 1 cut(s) 1185
AfaI GTAC 5 cut(s) 191, 797, 1337, 1371, 1991
AfiI CCNNNNNNNGG 2 cut(s) 1379, 1737
AflIII ACRYGT 2 cut(s) 186, 1585
AjiI CACGTC 1 cut(s) 208
AjnI CCWGG 1 cut(s) 260
AjuI GAANNNNNNNTTGG 2 cut(s) 737, 769
AloI GAACNNNNNNTCC 4 cut(s) 711, 743, 1011, 1043
AluBI AGCT 9 cut(s) 103, 121, 341, 424, 984, 1379, 1544, 1561, 1867
AluI AGCT 9 cut(s) 103, 121, 341, 424, 984, 1379, 1544, 1561, 1867
Alw21I GWGCWC 2 cut(s) 1490, 1585
Alw26I GTCTC 3 cut(s) 1062, 1653, 1746
AlwI GGATC 2 cut(s) 1021, 1034
AoxI GGCC 5 cut(s) 31, 202, 318, 993, 1411
ApeKI GCWGC 9 cut(s) 100, 118, 421, 424, 1010, 1465, 1541, 1665, 1867
ApoI RAATTY 4 cut(s) 36, 1058, 1177, 1442
AseI ATTAAT 1 cut(s) 639
AspLEI GCGC 1 cut(s) 21
AspS9I GGNCC 1 cut(s) 1246
AsuC2I CCSGG 5 cut(s) 280, 1415, 1683, 1927, 2038
AsuHPI GGTGA 5 cut(s) 122, 520, 1529, 1865, 2036
AsuII TTCGAA 1 cut(s) 497
AvaII GGWCC 1 cut(s) 1246
BalI TGGCCA 1 cut(s) 204
BamHI GGATCC 1 cut(s) 1026
BanII GRGCYC 1 cut(s) 353
BarI GAAGNNNNNNTAC 2 cut(s) 1854, 1886
BbsI GAAGAC 1 cut(s) 1775
Bbv12I GWGCWC 2 cut(s) 1490, 1585
BbvI GCAGC 9 cut(s) 112, 130, 411, 433, 1022, 1477, 1553, 1677, 1854
BccI CCATC 7 cut(s) 406, 505, 575, 638, 895, 1884, 2051
BceAI ACGGC 2 cut(s) 6, 529
BcgI CGANNNNNNTGC 2 cut(s) 1161, 1195
BciT130I CCWGG 1 cut(s) 262
BclI TGATCA 3 cut(s) 882, 1123, 1789
BcnI CCSGG 5 cut(s) 280, 1415, 1683, 1927, 2038
BcoDI GTCTC 3 cut(s) 1062, 1653, 1746
BfaI CTAG 4 cut(s) 675, 785, 981, 1374
BglI GCCNNNNNGGC 1 cut(s) 27
BglII AGATCT 1 cut(s) 1825
BmcAI AGTACT 1 cut(s) 1337
Bme1390I CCNGG 6 cut(s) 262, 280, 1415, 1683, 1927, 2038
Bme18I GGWCC 1 cut(s) 1246
BmgBI CACGTC 1 cut(s) 208
BmgT120I GGNCC 1 cut(s) 1246
BmiI GGNNCC 2 cut(s) 1028, 1729
BmrFI CCNGG 6 cut(s) 262, 280, 1415, 1683, 1927, 2038
BmrI ACTGGG 1 cut(s) 352
BmsI GCATC 3 cut(s) 531, 544, 1210
BmuI ACTGGG 1 cut(s) 352
BpiI GAAGAC 1 cut(s) 1775
Bpu10I CCTNAGC 3 cut(s) 849, 1041, 1210
Bpu14I TTCGAA 1 cut(s) 497
BpuEI CTTGAG 2 cut(s) 54, 206
BpuMI CCSGG 5 cut(s) 280, 1415, 1683, 1927, 2038
BsaI GGTCTC 1 cut(s) 1746
BsaJI CCNNGG 5 cut(s) 63, 270, 1347, 1513, 1731
BsaXI ACNNNNNCTCC 8 cut(s) 176, 206, 530, 560, 1328, 1358, 1572, 1602
Bsc4I CCNNNNNNNGG 2 cut(s) 1379, 1737
Bse1I ACTGG 3 cut(s) 358, 1542, 2087
Bse3DI GCAATG 2 cut(s) 1460, 1896
BseBI CCWGG 1 cut(s) 262
BseDI CCNNGG 5 cut(s) 63, 270, 1347, 1513, 1731
BseGI GGATG 4 cut(s) 56, 559, 910, 1633
BseLI CCNNNNNNNGG 2 cut(s) 1379, 1737
BseMI GCAATG 2 cut(s) 1460, 1896
BseMII CTCAG 6 cut(s) 692, 840, 1055, 1536, 1560, 1763
BseNI ACTGG 3 cut(s) 358, 1542, 2087
BseRI GAGGAG 3 cut(s) 62, 170, 551
BseXI GCAGC 9 cut(s) 112, 130, 411, 433, 1022, 1477, 1553, 1677, 1854
BseYI CCCAGC 1 cut(s) 341
BsgI GTGCAG 2 cut(s) 681, 1589
Bsh1236I CGCG 2 cut(s) 296, 1610
BshFI GGCC 5 cut(s) 33, 204, 320, 995, 1413
BsiHKAI GWGCWC 2 cut(s) 1490, 1585
BsiSI CCGG 5 cut(s) 279, 1414, 1683, 1926, 2038
BslI CCNNNNNNNGG 2 cut(s) 1379, 1737
BsmAI GTCTC 3 cut(s) 1062, 1653, 1746
BsmBI CGTCTC 1 cut(s) 1062
BsnI GGCC 5 cut(s) 33, 204, 320, 995, 1413
Bso31I GGTCTC 1 cut(s) 1746
Bsp119I TTCGAA 1 cut(s) 497
Bsp1286I GDGCHC 3 cut(s) 353, 1490, 1585
Bsp143I GATC 5 cut(s) 882, 1026, 1123, 1789, 1825
Bsp19I CCATGG 3 cut(s) 270, 1347, 1513
BspACI CCGC 5 cut(s) 30, 485, 611, 853, 2073
BspANI GGCC 5 cut(s) 33, 204, 320, 995, 1413
BspCNI CTCAG 6 cut(s) 693, 841, 1054, 1537, 1561, 1762
BspFNI CGCG 2 cut(s) 296, 1610
BspLI GGNNCC 2 cut(s) 1028, 1729
BspPI GGATC 2 cut(s) 1021, 1034
BspQI GCTCTTC 1 cut(s) 331
BspT104I TTCGAA 1 cut(s) 497
BspTNI GGTCTC 1 cut(s) 1746
BsrBI CCGCTC 1 cut(s) 853
BsrDI GCAATG 2 cut(s) 1460, 1896
BsrI ACTGG 3 cut(s) 358, 1542, 2087
BssECI CCNNGG 5 cut(s) 63, 270, 1347, 1513, 1731
BssMI GATC 5 cut(s) 882, 1026, 1123, 1789, 1825
BssT1I CCWWGG 5 cut(s) 63, 270, 1347, 1513, 1731
Bst2UI CCWGG 1 cut(s) 262
Bst4CI ACNGT 2 cut(s) 739, 1577
Bst6I CTCTTC 2 cut(s) 331, 1425
BstAPI GCANNNNNTGC 1 cut(s) 686
BstBI TTCGAA 1 cut(s) 497
BstC8I GCNNGC 5 cut(s) 116, 1457, 1504, 1608, 1923
BstDEI CTNAG 8 cut(s) 701, 849, 1041, 1210, 1545, 1569, 1749, 1999
BstDSI CCRYGG 3 cut(s) 270, 1347, 1513
BstEII GGTNACC 1 cut(s) 274
BstF5I GGATG 4 cut(s) 56, 559, 910, 1633
BstFNI CGCG 2 cut(s) 296, 1610
BstHHI GCGC 1 cut(s) 21
BstKTI GATC 5 cut(s) 885, 1029, 1126, 1792, 1828
BstMAI GTCTC 3 cut(s) 1062, 1653, 1746
BstMBI GATC 5 cut(s) 882, 1026, 1123, 1789, 1825
BstMWI GCNNNNNNNGC 5 cut(s) 27, 686, 695, 1007, 1465
BstNI CCWGG 1 cut(s) 262
BstNSI RCATGY 3 cut(s) 190, 1459, 1589
BstPI GGTNACC 1 cut(s) 274
BstSCI CCNGG 6 cut(s) 260, 278, 1413, 1681, 1925, 2036
BstUI CGCG 2 cut(s) 296, 1610
BstV1I GCAGC 9 cut(s) 112, 130, 411, 433, 1022, 1477, 1553, 1677, 1854
BstV2I GAAGAC 1 cut(s) 1775
BstX2I RGATCY 2 cut(s) 1026, 1825
BstYI RGATCY 2 cut(s) 1026, 1825
BsuRI GGCC 5 cut(s) 33, 204, 320, 995, 1413
BtgI CCRYGG 3 cut(s) 270, 1347, 1513
BtrI CACGTC 1 cut(s) 208
BtsCI GGATG 4 cut(s) 56, 559, 910, 1633
BtsIMutI CAGTG 3 cut(s) 698, 1582, 1907
Cac8I GCNNGC 5 cut(s) 116, 1457, 1504, 1608, 1923
CfoI GCGC 1 cut(s) 21
Cfr13I GGNCC 1 cut(s) 1246
Csp6I GTAC 5 cut(s) 190, 796, 1336, 1370, 1990
CviQI GTAC 5 cut(s) 190, 796, 1336, 1370, 1990
DdeI CTNAG 8 cut(s) 701, 849, 1041, 1210, 1545, 1569, 1749, 1999
DpnI GATC 5 cut(s) 884, 1028, 1125, 1791, 1827
DpnII GATC 5 cut(s) 882, 1026, 1123, 1789, 1825
DraI TTTAAA 2 cut(s) 1057, 1332
EaeI YGGCCR 3 cut(s) 31, 202, 1411
Eam1104I CTCTTC 2 cut(s) 331, 1425
EarI CTCTTC 2 cut(s) 331, 1425
EciI GGCGGA 1 cut(s) 500
Eco130I CCWWGG 5 cut(s) 63, 270, 1347, 1513, 1731
Eco147I AGGCCT 2 cut(s) 320, 995
Eco24I GRGCYC 1 cut(s) 353
Eco31I GGTCTC 1 cut(s) 1746
Eco47I GGWCC 1 cut(s) 1246
Eco57I CTGAAG 1 cut(s) 1185
Eco91I GGTNACC 1 cut(s) 274
EcoO65I GGTNACC 1 cut(s) 274
EcoRI GAATTC 1 cut(s) 1177
EcoRII CCWGG 1 cut(s) 260
EcoT14I CCWWGG 5 cut(s) 63, 270, 1347, 1513, 1731
EcoT22I ATGCAT 1 cut(s) 161
EcoT38I GRGCYC 1 cut(s) 353
ErhI CCWWGG 5 cut(s) 63, 270, 1347, 1513, 1731
Esp3I CGTCTC 1 cut(s) 1062
FalI AAGNNNNNCTT 2 cut(s) 999, 1031
FauI CCCGC 1 cut(s) 2066
FauNDI CATATG 1 cut(s) 1360
FbaI TGATCA 3 cut(s) 882, 1123, 1789
FblI GTMKAC 1 cut(s) 210
FokI GGATG 4 cut(s) 43, 566, 917, 1640
FriOI GRGCYC 1 cut(s) 353
FspBI CTAG 4 cut(s) 675, 785, 981, 1374
GlaI GCGC 1 cut(s) 20
GsaI CCCAGC 1 cut(s) 345
HaeIII GGCC 5 cut(s) 33, 204, 320, 995, 1413
HapII CCGG 5 cut(s) 279, 1414, 1683, 1926, 2038
HhaI GCGC 1 cut(s) 21
Hin6I GCGC 1 cut(s) 19
HinP1I GCGC 1 cut(s) 19
HincII GTYRAC 1 cut(s) 211
HindII GTYRAC 1 cut(s) 211
HinfI GANTC 2 cut(s) 50, 518
HpaII CCGG 5 cut(s) 279, 1414, 1683, 1926, 2038
HphI GGTGA 5 cut(s) 122, 520, 1529, 1865, 2036
Hpy166II GTNNAC 5 cut(s) 54, 211, 567, 937, 972
Hpy188I TCNGA 9 cut(s) 42, 307, 328, 840, 882, 1161, 1637, 1752, 1794
Hpy188III TCNNGA 4 cut(s) 807, 898, 913, 1787
Hpy8I GTNNAC 5 cut(s) 54, 211, 567, 937, 972
Hpy99I CGWCG 3 cut(s) 212, 236, 739
HpyAV CCTTC 5 cut(s) 910, 1319, 1416, 1606, 2004
HpyCH4III ACNGT 2 cut(s) 739, 1577
HpyCH4IV ACGT 1 cut(s) 207
HpyF10VI GCNNNNNNNGC 5 cut(s) 27, 686, 695, 1007, 1465
HpyF3I CTNAG 8 cut(s) 701, 849, 1041, 1210, 1545, 1569, 1749, 1999
HpySE526I ACGT 1 cut(s) 207
HspAI GCGC 1 cut(s) 19
Ksp22I TGATCA 3 cut(s) 882, 1123, 1789
Kzo9I GATC 5 cut(s) 882, 1026, 1123, 1789, 1825
LguI GCTCTTC 1 cut(s) 331
LmnI GCTCC 3 cut(s) 126, 1580, 1727
Lsp1109I GCAGC 9 cut(s) 112, 130, 411, 433, 1022, 1477, 1553, 1677, 1854
LweI GCATC 3 cut(s) 531, 544, 1210
MaeI CTAG 4 cut(s) 675, 785, 981, 1374
MaeII ACGT 1 cut(s) 207
MaeIII GTNAC 2 cut(s) 274, 476
MalI GATC 5 cut(s) 884, 1028, 1125, 1791, 1827
MbiI CCGCTC 1 cut(s) 853
MboI GATC 5 cut(s) 882, 1026, 1123, 1789, 1825
MboII GAAGA 8 cut(s) 348, 1442, 1451, 1660, 1684, 1775, 1957, 2026
MflI RGATCY 2 cut(s) 1026, 1825
MhlI GDGCHC 3 cut(s) 353, 1490, 1585
MlsI TGGCCA 1 cut(s) 204
MluCI AATT 8 cut(s) 36, 443, 1058, 1177, 1442, 1550, 1638, 1852
MluNI TGGCCA 1 cut(s) 204
MlyI GAGTC 1 cut(s) 59
MmeI TCCRAC 4 cut(s) 1054, 1184, 1684, 1987
Mox20I TGGCCA 1 cut(s) 204
Mph1103I ATGCAT 1 cut(s) 161
MscI TGGCCA 1 cut(s) 204
MseI TTAA 8 cut(s) 381, 639, 1056, 1143, 1187, 1292, 1331, 1449
MslI CAYNNNNRTG 1 cut(s) 1881
Msp20I TGGCCA 1 cut(s) 204
MspA1I CMGCKG 2 cut(s) 424, 1544
MspI CCGG 5 cut(s) 279, 1414, 1683, 1926, 2038
MspR9I CCNGG 6 cut(s) 262, 280, 1415, 1683, 1927, 2038
MvaI CCWGG 1 cut(s) 262
MvnI CGCG 2 cut(s) 296, 1610
MwoI GCNNNNNNNGC 5 cut(s) 27, 686, 695, 1007, 1465
NciI CCSGG 5 cut(s) 280, 1415, 1683, 1927, 2038
NcoI CCATGG 3 cut(s) 270, 1347, 1513
NdeI CATATG 1 cut(s) 1360
NdeII GATC 5 cut(s) 882, 1026, 1123, 1789, 1825
NlaIV GGNNCC 2 cut(s) 1028, 1729
NsiI ATGCAT 1 cut(s) 161
NspI RCATGY 3 cut(s) 190, 1459, 1589
NspV TTCGAA 1 cut(s) 497
PaeI GCATGC 1 cut(s) 1459
PceI AGGCCT 2 cut(s) 320, 995
PciI ACATGT 2 cut(s) 186, 1585
PciSI GCTCTTC 1 cut(s) 331
PcsI WCGNNNNNNNCGW 2 cut(s) 293, 569
PfeI GAWTC 1 cut(s) 518
PflMI CCANNNNNTGG 1 cut(s) 1737
PfoI TCCNGGA 1 cut(s) 260
PleI GAGTC 1 cut(s) 58
PpsI GAGTC 1 cut(s) 58
PscI ACATGT 2 cut(s) 186, 1585
PshBI ATTAAT 1 cut(s) 639
PsiI TTATAA 1 cut(s) 627
Psp6I CCWGG 1 cut(s) 260
PspEI GGTNACC 1 cut(s) 274
PspFI CCCAGC 1 cut(s) 341
PspGI CCWGG 1 cut(s) 260
PspN4I GGNNCC 2 cut(s) 1028, 1729
PspPI GGNCC 1 cut(s) 1246
PsrI GAACNNNNNNTAC 2 cut(s) 1185, 1217
PsuI RGATCY 2 cut(s) 1026, 1825
PvuII CAGCTG 2 cut(s) 424, 1544
RsaI GTAC 5 cut(s) 191, 797, 1337, 1371, 1991
RsaNI GTAC 5 cut(s) 190, 796, 1336, 1370, 1990
RseI CAYNNNNRTG 1 cut(s) 1881
SalI GTCGAC 1 cut(s) 209
SapI GCTCTTC 1 cut(s) 331
SaqAI TTAA 8 cut(s) 381, 639, 1056, 1143, 1187, 1292, 1331, 1449
Sau3AI GATC 5 cut(s) 882, 1026, 1123, 1789, 1825
Sau96I GGNCC 1 cut(s) 1246
ScaI AGTACT 1 cut(s) 1337
SchI GAGTC 1 cut(s) 59
ScrFI CCNGG 6 cut(s) 262, 280, 1415, 1683, 1927, 2038
SduI GDGCHC 3 cut(s) 353, 1490, 1585
SfaNI GCATC 3 cut(s) 531, 544, 1210
SfuI TTCGAA 1 cut(s) 497
SinI GGWCC 1 cut(s) 1246
SmiMI CAYNNNNRTG 1 cut(s) 1881
SmlI CTYRAG 2 cut(s) 69, 221
SmoI CTYRAG 2 cut(s) 69, 221
SphI GCATGC 1 cut(s) 1459
Sse9I AATT 8 cut(s) 36, 443, 1058, 1177, 1442, 1550, 1638, 1852
SseBI AGGCCT 2 cut(s) 320, 995
SsiI CCGC 5 cut(s) 30, 485, 611, 853, 2073
SspI AATATT 1 cut(s) 862
SspMI CTAG 4 cut(s) 675, 785, 981, 1374
StuI AGGCCT 2 cut(s) 320, 995
StyD4I CCNGG 6 cut(s) 260, 278, 1413, 1681, 1925, 2036
StyI CCWWGG 5 cut(s) 63, 270, 1347, 1513, 1731
TaaI ACNGT 2 cut(s) 739, 1577
TaiI ACGT 1 cut(s) 210
TaqI TCGA 9 cut(s) 210, 231, 497, 572, 734, 800, 897, 912, 1563
TasI AATT 8 cut(s) 36, 443, 1058, 1177, 1442, 1550, 1638, 1852
TatI WGTACW 4 cut(s) 189, 795, 1335, 1989
TauI GCSGC 2 cut(s) 33, 614
TfiI GAWTC 1 cut(s) 518
Tru1I TTAA 8 cut(s) 381, 639, 1056, 1143, 1187, 1292, 1331, 1449
Tru9I TTAA 8 cut(s) 381, 639, 1056, 1143, 1187, 1292, 1331, 1449
TscAI CASTG 3 cut(s) 705, 1582, 1914
TseI GCWGC 9 cut(s) 100, 118, 421, 424, 1010, 1465, 1541, 1665, 1867
TspDTI ATGAA 6 cut(s) 719, 921, 1025, 1193, 1685, 2058
TspRI CASTG 3 cut(s) 705, 1582, 1914
Van91I CCANNNNNTGG 1 cut(s) 1737
VpaK11BI GGWCC 1 cut(s) 1246
VspI ATTAAT 1 cut(s) 639
XapI RAATTY 4 cut(s) 36, 1058, 1177, 1442
XceI RCATGY 3 cut(s) 190, 1459, 1589
XcmI CCANNNNNNNNNTGG 2 cut(s) 61, 2054
XmiI GTMKAC 1 cut(s) 210
XspI CTAG 4 cut(s) 675, 785, 981, 1374
ZrmI AGTACT 1 cut(s) 1337
Zsp2I ATGCAT 1 cut(s) 161
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.