Pentatricopeptide repeat-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 621 |
| AccI | GTMKAC | 1 cut(s) | 204 |
| AciI | CCGC | 5 cut(s) | 14, 30, 479, 1538, 1660 |
| AcoI | YGGCCR | 1 cut(s) | 1657 |
| AcsI | RAATTY | 4 cut(s) | 4, 1171, 1755, 1945 |
| AcuI | CTGAAG | 3 cut(s) | 758, 1179, 1452 |
| AcvI | CACGTG | 1 cut(s) | 1580 |
| AcyI | GRCGYC | 1 cut(s) | 48 |
| AfaI | GTAC | 5 cut(s) | 143, 185, 791, 868, 1985 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1016 |
| AflIII | ACRYGT | 3 cut(s) | 180, 658, 1579 |
| AjnI | CCWGG | 2 cut(s) | 42, 1675 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 428, 460 |
| Alw21I | GWGCWC | 3 cut(s) | 117, 1484, 1579 |
| Alw26I | GTCTC | 3 cut(s) | 296, 1056, 1740 |
| AoxI | GGCC | 1 cut(s) | 1657 |
| ApeKI | GCWGC | 6 cut(s) | 94, 605, 1004, 1214, 1535, 1552 |
| ApoI | RAATTY | 4 cut(s) | 4, 1171, 1755, 1945 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1860 |
| AspLEI | GCGC | 1 cut(s) | 64 |
| AsuC2I | CCSGG | 1 cut(s) | 1921 |
| AsuHPI | GGTGA | 4 cut(s) | 605, 1523, 1859, 2030 |
| AsuII | TTCGAA | 1 cut(s) | 1592 |
| BaeGI | GKGCMC | 1 cut(s) | 36 |
| BanII | GRGCYC | 1 cut(s) | 117 |
| BbrPI | CACGTG | 1 cut(s) | 1580 |
| BbsI | GAAGAC | 1 cut(s) | 214 |
| Bbv12I | GWGCWC | 3 cut(s) | 117, 1484, 1579 |
| BbvI | GCAGC | 6 cut(s) | 106, 617, 991, 1226, 1547, 1564 |
| BccI | CCATC | 9 cut(s) | 499, 569, 622, 632, 839, 889, 1649, 1878, 2045 |
| BceAI | ACGGC | 2 cut(s) | 6, 523 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 142, 176 |
| BciT130I | CCWGG | 2 cut(s) | 44, 1677 |
| BclI | TGATCA | 6 cut(s) | 876, 981, 1012, 1117, 1513, 1783 |
| BcnI | CCSGG | 1 cut(s) | 1921 |
| BcoDI | GTCTC | 3 cut(s) | 296, 1056, 1740 |
| BfaI | CTAG | 2 cut(s) | 975, 1368 |
| BfmI | CTRYAG | 1 cut(s) | 1681 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 27 |
| BisI | GCNGC | 7 cut(s) | 95, 606, 1005, 1215, 1536, 1553, 1660 |
| BlpI | GCTNAGC | 1 cut(s) | 123 |
| BlsI | GCNGC | 7 cut(s) | 96, 607, 1006, 1216, 1537, 1554, 1661 |
| Bme1390I | CCNGG | 3 cut(s) | 44, 1677, 1921 |
| BmrFI | CCNGG | 3 cut(s) | 44, 1677, 1921 |
| BmrI | ACTGGG | 2 cut(s) | 282, 346 |
| BmsI | GCATC | 4 cut(s) | 322, 502, 525, 1539 |
| BmuI | ACTGGG | 2 cut(s) | 282, 346 |
| BpiI | GAAGAC | 1 cut(s) | 214 |
| BpmI | CTGGAG | 2 cut(s) | 26, 357 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1035, 1204 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 123 |
| Bpu14I | TTCGAA | 1 cut(s) | 1592 |
| BpuMI | CCSGG | 1 cut(s) | 1921 |
| Bsa29I | ATCGAT | 1 cut(s) | 2032 |
| BsaAI | YACGTR | 1 cut(s) | 1580 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2028 |
| BsaHI | GRCGYC | 1 cut(s) | 48 |
| BsaI | GGTCTC | 2 cut(s) | 1056, 1740 |
| BsaJI | CCNNGG | 3 cut(s) | 57, 1218, 1992 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 524, 554, 1566, 1596 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1016 |
| Bse1I | ACTGG | 3 cut(s) | 277, 352, 2081 |
| Bse3DI | GCAATG | 2 cut(s) | 270, 778 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2028 |
| BseBI | CCWGG | 2 cut(s) | 44, 1677 |
| BseCI | ATCGAT | 1 cut(s) | 2032 |
| BseDI | CCNNGG | 3 cut(s) | 57, 1218, 1992 |
| BseGI | GGATG | 3 cut(s) | 633, 904, 1738 |
| BseJI | GATNNNNATC | 1 cut(s) | 2028 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1016 |
| BseMI | GCAATG | 2 cut(s) | 270, 778 |
| BseMII | CTCAG | 5 cut(s) | 137, 251, 291, 1049, 1554 |
| BseNI | ACTGG | 3 cut(s) | 277, 352, 2081 |
| BseRI | GAGGAG | 3 cut(s) | 545, 1263, 1645 |
| BseSI | GKGCMC | 1 cut(s) | 36 |
| BseXI | GCAGC | 6 cut(s) | 106, 617, 991, 1226, 1547, 1564 |
| BsgI | GTGCAG | 1 cut(s) | 990 |
| BshFI | GGCC | 1 cut(s) | 1659 |
| BshVI | ATCGAT | 1 cut(s) | 2032 |
| BsiHKAI | GWGCWC | 3 cut(s) | 117, 1484, 1579 |
| BsiSI | CCGG | 1 cut(s) | 1920 |
| BslFI | GGGAC | 1 cut(s) | 409 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1016 |
| BsmAI | GTCTC | 3 cut(s) | 296, 1056, 1740 |
| BsmFI | GGGAC | 1 cut(s) | 409 |
| BsmI | GAATGC | 1 cut(s) | 421 |
| BsnI | GGCC | 1 cut(s) | 1659 |
| Bso31I | GGTCTC | 2 cut(s) | 1056, 1740 |
| Bsp119I | TTCGAA | 1 cut(s) | 1592 |
| Bsp1286I | GDGCHC | 4 cut(s) | 36, 117, 1484, 1579 |
| Bsp143I | GATC | 7 cut(s) | 652, 876, 981, 1012, 1117, 1513, 1783 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 123 |
| BspACI | CCGC | 5 cut(s) | 14, 30, 479, 1538, 1660 |
| BspANI | GGCC | 1 cut(s) | 1659 |
| BspCNI | CTCAG | 5 cut(s) | 136, 250, 292, 1048, 1555 |
| BspDI | ATCGAT | 1 cut(s) | 2032 |
| BspQI | GCTCTTC | 1 cut(s) | 1200 |
| BspT104I | TTCGAA | 1 cut(s) | 1592 |
| BspTNI | GGTCTC | 2 cut(s) | 1056, 1740 |
| BsrDI | GCAATG | 2 cut(s) | 270, 778 |
| BsrI | ACTGG | 3 cut(s) | 277, 352, 2081 |
| BssECI | CCNNGG | 3 cut(s) | 57, 1218, 1992 |
| BssMI | GATC | 7 cut(s) | 652, 876, 981, 1012, 1117, 1513, 1783 |
| BssNI | GRCGYC | 1 cut(s) | 48 |
| BssT1I | CCWWGG | 3 cut(s) | 57, 1218, 1992 |
| Bst2UI | CCWGG | 2 cut(s) | 44, 1677 |
| Bst4CI | ACNGT | 2 cut(s) | 733, 1877 |
| Bst6I | CTCTTC | 4 cut(s) | 1200, 1343, 1428, 1782 |
| BstACI | GRCGYC | 1 cut(s) | 48 |
| BstBAI | YACGTR | 1 cut(s) | 1580 |
| BstBI | TTCGAA | 1 cut(s) | 1592 |
| BstC8I | GCNNGC | 5 cut(s) | 32, 382, 517, 1498, 1917 |
| BstDEI | CTNAG | 6 cut(s) | 123, 237, 300, 1035, 1204, 1563 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1014 |
| BstF5I | GGATG | 3 cut(s) | 633, 904, 1738 |
| BstHHI | GCGC | 1 cut(s) | 64 |
| BstKTI | GATC | 7 cut(s) | 655, 879, 984, 1015, 1120, 1516, 1786 |
| BstMAI | GTCTC | 3 cut(s) | 296, 1056, 1740 |
| BstMBI | GATC | 7 cut(s) | 652, 876, 981, 1012, 1117, 1513, 1783 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 27, 680, 1001, 1965 |
| BstNI | CCWGG | 2 cut(s) | 44, 1677 |
| BstNSI | RCATGY | 4 cut(s) | 40, 184, 662, 1453 |
| BstSCI | CCNGG | 3 cut(s) | 42, 1675, 1919 |
| BstSFI | CTRYAG | 1 cut(s) | 1681 |
| BstSLI | GKGCMC | 1 cut(s) | 36 |
| BstV1I | GCAGC | 6 cut(s) | 106, 617, 991, 1226, 1547, 1564 |
| BstV2I | GAAGAC | 1 cut(s) | 214 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 58 |
| Bsu15I | ATCGAT | 1 cut(s) | 2032 |
| BsuRI | GGCC | 1 cut(s) | 1659 |
| BsuTUI | ATCGAT | 1 cut(s) | 2032 |
| BtsCI | GGATG | 3 cut(s) | 633, 904, 1738 |
| BtsI | GCAGTG | 1 cut(s) | 1622 |
| BtsIMutI | CAGTG | 2 cut(s) | 1622, 1882 |
| Cac8I | GCNNGC | 5 cut(s) | 32, 382, 517, 1498, 1917 |
| CfoI | GCGC | 1 cut(s) | 64 |
| ClaI | ATCGAT | 1 cut(s) | 2032 |
| CseI | GACGC | 3 cut(s) | 56, 557, 1805 |
| Csp6I | GTAC | 5 cut(s) | 142, 184, 790, 867, 1984 |
| CviQI | GTAC | 5 cut(s) | 142, 184, 790, 867, 1984 |
| DdeI | CTNAG | 6 cut(s) | 123, 237, 300, 1035, 1204, 1563 |
| DpnI | GATC | 7 cut(s) | 654, 878, 983, 1014, 1119, 1515, 1785 |
| DpnII | GATC | 7 cut(s) | 652, 876, 981, 1012, 1117, 1513, 1783 |
| DraI | TTTAAA | 1 cut(s) | 1326 |
| EaeI | YGGCCR | 1 cut(s) | 1657 |
| Eam1104I | CTCTTC | 4 cut(s) | 1200, 1343, 1428, 1782 |
| EarI | CTCTTC | 4 cut(s) | 1200, 1343, 1428, 1782 |
| EciI | GGCGGA | 1 cut(s) | 494 |
| Ecl136II | GAGCTC | 1 cut(s) | 115 |
| Eco130I | CCWWGG | 3 cut(s) | 57, 1218, 1992 |
| Eco24I | GRGCYC | 1 cut(s) | 117 |
| Eco31I | GGTCTC | 2 cut(s) | 1056, 1740 |
| Eco53kI | GAGCTC | 1 cut(s) | 115 |
| Eco57I | CTGAAG | 3 cut(s) | 758, 1179, 1452 |
| Eco72I | CACGTG | 1 cut(s) | 1580 |
| EcoICRI | GAGCTC | 1 cut(s) | 115 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1014 |
| EcoRI | GAATTC | 1 cut(s) | 1171 |
| EcoRII | CCWGG | 2 cut(s) | 42, 1675 |
| EcoT14I | CCWWGG | 3 cut(s) | 57, 1218, 1992 |
| EcoT22I | ATGCAT | 2 cut(s) | 155, 423 |
| EcoT38I | GRGCYC | 1 cut(s) | 117 |
| ErhI | CCWWGG | 3 cut(s) | 57, 1218, 1992 |
| FaqI | GGGAC | 1 cut(s) | 409 |
| FauI | CCCGC | 1 cut(s) | 23 |
| FbaI | TGATCA | 6 cut(s) | 876, 981, 1012, 1117, 1513, 1783 |
| FblI | GTMKAC | 1 cut(s) | 204 |
| Fnu4HI | GCNGC | 7 cut(s) | 95, 606, 1005, 1215, 1536, 1553, 1660 |
| FokI | GGATG | 3 cut(s) | 640, 911, 1725 |
| FriOI | GRGCYC | 1 cut(s) | 117 |
| Fsp4HI | GCNGC | 7 cut(s) | 95, 606, 1005, 1215, 1536, 1553, 1660 |
| FspBI | CTAG | 2 cut(s) | 975, 1368 |
| GlaI | GCGC | 1 cut(s) | 63 |
| GluI | GCNGC | 7 cut(s) | 95, 606, 1005, 1215, 1536, 1553, 1660 |
| GsuI | CTGGAG | 2 cut(s) | 26, 357 |
| HaeIII | GGCC | 1 cut(s) | 1659 |
| HapII | CCGG | 1 cut(s) | 1920 |
| HgaI | GACGC | 3 cut(s) | 56, 557, 1805 |
| HhaI | GCGC | 1 cut(s) | 64 |
| Hin1I | GRCGYC | 1 cut(s) | 48 |
| Hin6I | GCGC | 1 cut(s) | 62 |
| HinP1I | GCGC | 1 cut(s) | 62 |
| HincII | GTYRAC | 2 cut(s) | 205, 931 |
| HindII | GTYRAC | 2 cut(s) | 205, 931 |
| HindIII | AAGCTT | 1 cut(s) | 1859 |
| HinfI | GANTC | 5 cut(s) | 596, 839, 1020, 1504, 1820 |
| HpaII | CCGG | 1 cut(s) | 1920 |
| HphI | GGTGA | 4 cut(s) | 605, 1523, 1859, 2030 |
| Hpy166II | GTNNAC | 6 cut(s) | 144, 205, 561, 931, 966, 1243 |
| Hpy188III | TCNNGA | 3 cut(s) | 1517, 1781, 2021 |
| Hpy8I | GTNNAC | 6 cut(s) | 144, 205, 561, 931, 966, 1243 |
| HpyAV | CCTTC | 7 cut(s) | 182, 691, 731, 1313, 1410, 1846, 1998 |
| HpyCH4III | ACNGT | 2 cut(s) | 733, 1877 |
| HpyCH4IV | ACGT | 1 cut(s) | 1579 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 27, 680, 1001, 1965 |
| HpyF3I | CTNAG | 6 cut(s) | 123, 237, 300, 1035, 1204, 1563 |
| HpySE526I | ACGT | 1 cut(s) | 1579 |
| Hsp92I | GRCGYC | 1 cut(s) | 48 |
| HspAI | GCGC | 1 cut(s) | 62 |
| Ksp22I | TGATCA | 6 cut(s) | 876, 981, 1012, 1117, 1513, 1783 |
| Kzo9I | GATC | 7 cut(s) | 652, 876, 981, 1012, 1117, 1513, 1783 |
| LguI | GCTCTTC | 1 cut(s) | 1200 |
| LmnI | GCTCC | 5 cut(s) | 45, 112, 120, 1574, 1721 |
| Lsp1109I | GCAGC | 6 cut(s) | 106, 617, 991, 1226, 1547, 1564 |
| LweI | GCATC | 4 cut(s) | 322, 502, 525, 1539 |
| MaeI | CTAG | 2 cut(s) | 975, 1368 |
| MaeII | ACGT | 1 cut(s) | 1579 |
| MalI | GATC | 7 cut(s) | 654, 878, 983, 1014, 1119, 1515, 1785 |
| MboI | GATC | 7 cut(s) | 652, 876, 981, 1012, 1117, 1513, 1783 |
| MfeI | CAATTG | 1 cut(s) | 1890 |
| MhlI | GDGCHC | 4 cut(s) | 36, 117, 1484, 1579 |
| MlyI | GAGTC | 1 cut(s) | 833 |
| MmeI | TCCRAC | 2 cut(s) | 1483, 1678 |
| Mph1103I | ATGCAT | 2 cut(s) | 155, 423 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1860 |
| MseI | TTAA | 9 cut(s) | 633, 677, 1044, 1050, 1181, 1286, 1325, 1422, 1949 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1875 |
| MspA1I | CMGCKG | 1 cut(s) | 1538 |
| MspI | CCGG | 1 cut(s) | 1920 |
| MspR9I | CCNGG | 3 cut(s) | 44, 1677, 1921 |
| MunI | CAATTG | 1 cut(s) | 1890 |
| Mva1269I | GAATGC | 1 cut(s) | 421 |
| MvaI | CCWGG | 2 cut(s) | 44, 1677 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 27, 680, 1001, 1965 |
| NciI | CCSGG | 1 cut(s) | 1921 |
| NdeII | GATC | 7 cut(s) | 652, 876, 981, 1012, 1117, 1513, 1783 |
| NsiI | ATGCAT | 2 cut(s) | 155, 423 |
| NspI | RCATGY | 4 cut(s) | 40, 184, 662, 1453 |
| NspV | TTCGAA | 1 cut(s) | 1592 |
| PciI | ACATGT | 2 cut(s) | 180, 658 |
| PciSI | GCTCTTC | 1 cut(s) | 1200 |
| PctI | GAATGC | 1 cut(s) | 421 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1860 |
| PfeI | GAWTC | 4 cut(s) | 596, 1020, 1504, 1820 |
| PfoI | TCCNGGA | 1 cut(s) | 42 |
| PkrI | GCNGC | 7 cut(s) | 96, 607, 1006, 1216, 1537, 1554, 1661 |
| PleI | GAGTC | 1 cut(s) | 833 |
| PmaCI | CACGTG | 1 cut(s) | 1580 |
| PmlI | CACGTG | 1 cut(s) | 1580 |
| PpsI | GAGTC | 1 cut(s) | 833 |
| Ppu21I | YACGTR | 1 cut(s) | 1580 |
| PscI | ACATGT | 2 cut(s) | 180, 658 |
| PsiI | TTATAA | 1 cut(s) | 621 |
| Psp124BI | GAGCTC | 1 cut(s) | 117 |
| Psp6I | CCWGG | 2 cut(s) | 42, 1675 |
| PspCI | CACGTG | 1 cut(s) | 1580 |
| PspGI | CCWGG | 2 cut(s) | 42, 1675 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 479, 511 |
| RsaI | GTAC | 5 cut(s) | 143, 185, 791, 868, 1985 |
| RsaNI | GTAC | 5 cut(s) | 142, 184, 790, 867, 1984 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1875 |
| SacI | GAGCTC | 1 cut(s) | 117 |
| SalI | GTCGAC | 1 cut(s) | 203 |
| SapI | GCTCTTC | 1 cut(s) | 1200 |
| SaqAI | TTAA | 9 cut(s) | 633, 677, 1044, 1050, 1181, 1286, 1325, 1422, 1949 |
| SatI | GCNGC | 7 cut(s) | 95, 606, 1005, 1215, 1536, 1553, 1660 |
| Sau3AI | GATC | 7 cut(s) | 652, 876, 981, 1012, 1117, 1513, 1783 |
| SchI | GAGTC | 1 cut(s) | 833 |
| ScrFI | CCNGG | 3 cut(s) | 44, 1677, 1921 |
| SduI | GDGCHC | 4 cut(s) | 36, 117, 1484, 1579 |
| SfaNI | GCATC | 4 cut(s) | 322, 502, 525, 1539 |
| SfcI | CTRYAG | 1 cut(s) | 1681 |
| SfuI | TTCGAA | 1 cut(s) | 1592 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1875 |
| SsiI | CCGC | 5 cut(s) | 14, 30, 479, 1538, 1660 |
| SspI | AATATT | 1 cut(s) | 1570 |
| SspMI | CTAG | 2 cut(s) | 975, 1368 |
| SstI | GAGCTC | 1 cut(s) | 117 |
| StyD4I | CCNGG | 3 cut(s) | 42, 1675, 1919 |
| StyI | CCWWGG | 3 cut(s) | 57, 1218, 1992 |
| TaaI | ACNGT | 2 cut(s) | 733, 1877 |
| TaiI | ACGT | 1 cut(s) | 1582 |
| TaqI | TCGA | 7 cut(s) | 204, 225, 794, 1056, 1592, 1850, 2032 |
| TatI | WGTACW | 4 cut(s) | 141, 183, 789, 1983 |
| TauI | GCSGC | 1 cut(s) | 1662 |
| TfiI | GAWTC | 4 cut(s) | 596, 1020, 1504, 1820 |
| Tru1I | TTAA | 9 cut(s) | 633, 677, 1044, 1050, 1181, 1286, 1325, 1422, 1949 |
| Tru9I | TTAA | 9 cut(s) | 633, 677, 1044, 1050, 1181, 1286, 1325, 1422, 1949 |
| TscAI | CASTG | 2 cut(s) | 1622, 1882 |
| TseI | GCWGC | 6 cut(s) | 94, 605, 1004, 1214, 1535, 1552 |
| TspRI | CASTG | 2 cut(s) | 1622, 1882 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1014 |
| XapI | RAATTY | 4 cut(s) | 4, 1171, 1755, 1945 |
| XceI | RCATGY | 4 cut(s) | 40, 184, 662, 1453 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2048 |
| XmiI | GTMKAC | 1 cut(s) | 204 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1860 |
| XspI | CTAG | 2 cut(s) | 975, 1368 |
| Zsp2I | ATGCAT | 2 cut(s) | 155, 423 |