Rorug03G0132200

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0000085
Physical Location & Seq
Reverse (-)
10725277 .. 10727889
2613 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0132200.1

Sequence Viewer

Length: 957 bp
ATGAGTAACGATACAGATTCTGAAACTCTGCATTTTGATCTGAATACTGGAGCTAAGATTCCATCTGTTGGCCTTGGAACATGGAAAGCTGAACCAGGTGTGGTCGGTCAAGCTGTCATTGCCGCAGTGAAGAATGGCTACAGGCATATTGACTGTGCATCAGTCTATGGTAATGAAAAAGAGATAGGGGTTGCACTGAAGGAACTATTTTCTACTGGTGTAGTGCATCGCAGTGAAATCTTTATAACATCTAAGCTATGGTGCAGTGACCATGCACCAGAAGATGTCGCTAAGGCACTAAGCAAGTCTTTAGAAGACCTACAGCTTGACTACATTGATCTATACCTTATTCACTGGCCACTTCGTACAAAGCCTGGGTCACAGGGTTTGACTCCGGAAGTCATGGCTCCATTGTGCCTTCCAGAGACATGGAATGCAATGGAAGGCCTGTACGCATCCGGTCAGGCACGTGCAATTGGTGTGAGCAACTTCTCAACTAAGAAGCTGCAAGACCTCCTTAGTTATGCAAAAGTTCCACCTGCAGTAGATCAAGTTGAGTGTCATCCTGTCTGGCAACAACATTCTCTCCACAACTTGTGCAAATCAACTGGTATTCATTTATCGGCATATTCTCCTCTTGGTTCTCCAGGGTCTTGGGTGAAGGGGGAAATATTGAAGGAACCACTATTGGTTGAAGTTGCCGAAAAACTTCACAAGTCACCGGCACAAGTAGCGCTTCGTTGGGGTATTCAGAGTGGACACAGTATCCTTCCAAAGAGCGTAAATGAATCAAGGATCAAGGAAAATCAAAGTTTATTTGACTGGTGCATTCCTTCAGAGCTCTTCTCAAAATTCTCAGACATTCACCAGCAAAGGCTCCTCCGTGGTGATTTTGCAATCCATGAGAGCTGTAGTCCTTATAAAAGCCTAGATGAATTGTGGGATGGTGAAATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR PPR_2

Protein Analysis

318

Amino Acids

35.14

Weight (kDa)

5.8

Isoelectric Point (pI)

48.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aldo_ket_red PF00248 24 - 283 2.5e-51 Aldo/keto reductase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000085)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g05721 FvH4_2g05721 FvH4_3g35820 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35920 FvH4_3g38670 FvH4_3g43650 FvH4_3g43650 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44070 FvH4_5g01271 FvH4_5g02970 FvH4_5g02970 FvH4_5g02970 FvH4_5g27640 FvH4_5g27640 FvH4_5g27640 FvH4_6g05393 FvH4_6g52372 FvH4_7g06680 FvH4_7g12671 FvH4_7g13640 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31510
malus_domestica MD09G1227900.v1.1 MD11G1019800.v1.1 MD11G1020500.v1.1
prunus_persica Prupe.1G542800_v2.0.a1 Prupe.1G542800_v2.0.a1
pyrus_communis pycom11g01460 pycom11g01490 pycom11g01530 pycom11g01570 pycom15g35490
rosa_chinensis RchiOBHm_Chr1g0353711 RchiOBHm_Chr3g0473211 RchiOBHm_Chr3g0473291 RchiOBHm_Chr3g0473341 RchiOBHm_Chr3g0473381 RchiOBHm_Chr3g0473391 RchiOBHm_Chr3g0473441 RchiOBHm_Chr3g0473481 RchiOBHm_Chr3g0473531 RchiOBHm_Chr3g0473561 RchiOBHm_Chr3g0473571 RchiOBHm_Chr3g0483491 RchiOBHm_Chr3g0488681 RchiOBHm_Chr5g0059311 RchiOBHm_Chr5g0061291 RchiOBHm_Chr5g0061301 RchiOBHm_Chr5g0061331 RchiOBHm_Chr5g0064081 RchiOBHm_Chr5g0064111 RchiOBHm_Chr5g0064151 RchiOBHm_Chr5g0064171 RchiOBHm_Chr5g0069721 RchiOBHm_Chr5g0069731 RchiOBHm_Chr5g0069741 RchiOBHm_Chr5g0078251 RchiOBHm_Chr5g0078301 RchiOBHm_Chr5g0079511 RchiOBHm_Chr5g0079791 RchiOBHm_Chr5g0079811 RchiOBHm_Chr5g0079861 RchiOBHm_Chr5g0079881 RchiOBHm_Chr5g0080241 RchiOBHm_Chr5g0080281 RchiOBHm_Chr5g0080371 RchiOBHm_Chr5g0080671 RchiOBHm_Chr6g0256601 RchiOBHm_Chr6g0274791 RchiOBHm_Chr7g0221971 RchiOBHm_Chr7g0221981
rosa_laevigata RLG00000002106 RLG00000013523 RLG00000014806 RLG00000024010 RLG00000035451 RLG00000035455 RLG00000035464 RLG00000035705 RLG00000036094 RLG00000036817 RLG00000036825 RLG00000036826 RLG00000036848
rosa_multiflora Rmu_co8200400.1_g000001 Rmu_co8473147.1_g000001 Rmu_sc0000394.1_g000030 Rmu_sc0000555.1_g000030 Rmu_sc0000595.1_g000002 Rmu_sc0000595.1_g000006 Rmu_sc0000595.1_g000029 Rmu_sc0000689.1_g000018 Rmu_sc0000689.1_g000032 Rmu_sc0000689.1_g000041 Rmu_sc0000738.1_g000025 Rmu_sc0000826.1_g000016 Rmu_sc0000908.1_g000016 Rmu_sc0000908.1_g000019 Rmu_sc0000908.1_g000021 Rmu_sc0001208.1_g000087 Rmu_sc0001639.1_g000004 Rmu_sc0002075.1_g000004 Rmu_sc0002075.1_g000009 Rmu_sc0002187.1_g000042 Rmu_sc0002187.1_g000043 Rmu_sc0002187.1_g000060 Rmu_sc0002513.1_g000025 Rmu_sc0002983.1_g000008 Rmu_sc0003012.1_g000004 Rmu_sc0003069.1_g000019 Rmu_sc0003069.1_g000020 Rmu_sc0003069.1_g000047 Rmu_sc0003069.1_g000051 Rmu_sc0003069.1_g000053 Rmu_sc0003131.1_g000014 Rmu_sc0003514.1_g000003 Rmu_sc0003547.1_g000006 Rmu_sc0003547.1_g000008 Rmu_sc0004325.1_g000021 Rmu_sc0004482.1_g000004 Rmu_sc0004482.1_g000022 Rmu_sc0005006.1_g000004 Rmu_sc0005006.1_g000009 Rmu_sc0005006.1_g000010 Rmu_sc0005194.1_g000002 Rmu_sc0005194.1_g000003 Rmu_sc0005834.1_g000002 Rmu_sc0005947.1_g000023 Rmu_sc0006792.1_g000026 Rmu_sc0007612.1_g000001 Rmu_sc0007793.1_g000024 Rmu_sc0007793.1_g000025 Rmu_sc0008050.1_g000015 Rmu_sc0008336.1_g000003 Rmu_sc0010248.1_g000002 Rmu_sc0011921.1_g000001 Rmu_sc0011921.1_g000006 Rmu_sc0012138.1_g000001 Rmu_sc0016164.1_g000015 Rmu_sc0018807.1_g000005 Rmu_sc0030948.1_g000001 Rmu_sc0042587.1_g000001 Rmu_ssc0000170.1_g000020 Rmu_ssc0000170.1_g000026 Rmu_ssc0000170.1_g000029
rosa_roxburghii Rroxscaffold_1G00003040 Rroxscaffold_1G00003080 Rroxscaffold_1G00003430 Rroxscaffold_1G00003490 Rroxscaffold_1G00011370 Rroxscaffold_1G00016780 Rroxscaffold_1G00019390 Rroxscaffold_1G00019400 Rroxscaffold_1G00019420 Rroxscaffold_1G00021170 Rroxscaffold_3G00237530 Rroxscaffold_3G00246470 Rroxscaffold_4G00301730 Rroxscaffold_4G00309300 Rroxscaffold_6G00398250 Rroxscaffold_6G00398270 Rroxscaffold_6G00398280 Rroxscaffold_6G00408070 Rroxscaffold_7G00193940 Rroxscaffold_7G00209570
rosa_rugosa Rorug01G0237100 Rorug03G0098200 Rorug03G0132200 Rorug03G0132400 Rorug03G0132500 Rorug03G0132500 Rorug03G0132500 Rorug03G0132700 Rorug03G0132800 Rorug03G0205900 Rorug03G0206100 Rorug03G0206100 Rorug03G0206300 Rorug03G0206400 Rorug03G0206400 Rorug03G0240700 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug05G0322400 Rorug05G0339300 Rorug05G0339500 Rorug05G0362200 Rorug05G0362300 Rorug05G0362400 Rorug05G0362600 Rorug05G0362700 Rorug05G0362800 Rorug05G0363100 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0459900 Rorug05G0464600 Rorug05G0465000 Rorug05G0465100 Rorug05G0465200 Rorug05G0466000 Rorug05G0466300 Rorug05G0466400 Rorug05G0466500 Rorug05G0466600 Rorug05G0466700 Rorug05G0466700 Rorug05G0466700 Rorug05G0466800 Rorug05G0466900 Rorug05G0468100 Rorug05G0562200 Rorug05G0562300 Rorug06G0084400 Rorug06G0084500 Rorug06G0084500 Rorug06G0084600 Rorug07G0136400 Rorug07G0204500 Rorug07G0204600 Rorug07G0221500
rosa_samantha Rh5CG438200 Rh5CG569900 Rh6AG080700 Rh7CG362800 Rh7DG275900 Rh7DG343100
rosa_wichuraiana Rw0G004790 Rw0G008160 Rw0G008170 Rw0G008200 Rw0G008210 Rw0G012980 Rw0G013670 Rw0G019920 Rw0G020380 Rw0G022790 Rw0G022800 Rw0G023350 Rw1G005530 Rw1G021740 Rw3G013910 Rw3G015980 Rw3G023020 Rw3G023030 Rw3G025580 Rw5G027180 Rw5G037760 Rw5G037770 Rw5G037780 Rw5G037790 Rw5G037810 Rw5G037820 Rw5G039500 Rw5G039520 Rw5G039530 Rw5G039540 Rw5G039550 Rw5G039570 Rw5G039580 Rw5G039610 Rw5G039630 Rw5G039660 Rw5G042590 Rw5G047840 Rw5G048170 Rw5G048400 Rw5G048470 Rw5G048540 Rw6G007030 Rw6G007080 Rw6G007460 Rw6G017430 Rw7G023150 Rw7G023260 Rw7G029260 Rw7G029270 Rw7G030950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 245, 921
AarI CACCTGC 1 cut(s) 547
Acc36I ACCTGC 1 cut(s) 547
AccB7I CCANNNNNTGG 1 cut(s) 68
AccIII TCCGGA 1 cut(s) 394
AciI CCGC 1 cut(s) 123
AclWI GGATC 1 cut(s) 803
AcoI YGGCCR 1 cut(s) 356
AcsI RAATTY 2 cut(s) 851, 951
AcuI CTGAAG 2 cut(s) 218, 819
AcvI CACGTG 1 cut(s) 470
AfaI GTAC 2 cut(s) 367, 452
AfeI AGCGCT 1 cut(s) 735
AfiI CCNNNNNNNGG 1 cut(s) 68
AgsI TTSAA 2 cut(s) 676, 695
AjnI CCWGG 3 cut(s) 94, 373, 646
AluBI AGCT 8 cut(s) 53, 89, 113, 256, 325, 505, 841, 909
AluI AGCT 8 cut(s) 53, 89, 113, 256, 325, 505, 841, 909
Alw21I GWGCWC 1 cut(s) 843
Alw26I GTCTC 1 cut(s) 419
AlwI GGATC 1 cut(s) 803
AlwNI CAGNNNCTG 1 cut(s) 20
Aor13HI TCCGGA 1 cut(s) 394
Aor51HI AGCGCT 1 cut(s) 735
AoxI GGCC 3 cut(s) 70, 356, 445
ApeKI GCWGC 1 cut(s) 505
ApoI RAATTY 2 cut(s) 851, 951
ArsI GACNNNNNNTTYG 2 cut(s) 362, 394
Asp700I GAANNNNTTC 1 cut(s) 708
AspLEI GCGC 1 cut(s) 736
AsuHPI GGTGA 4 cut(s) 670, 711, 857, 899
BalI TGGCCA 1 cut(s) 358
BanII GRGCYC 1 cut(s) 843
BarI GAAGNNNNNNTAC 2 cut(s) 122, 154
BbrPI CACGTG 1 cut(s) 470
BbsI GAAGAC 1 cut(s) 321
Bbv12I GWGCWC 1 cut(s) 843
BbvI GCAGC 1 cut(s) 492
BccI CCATC 2 cut(s) 70, 938
BciT130I CCWGG 3 cut(s) 96, 375, 648
BciVI GTATCC 1 cut(s) 776
BcoDI GTCTC 1 cut(s) 419
BfaI CTAG 1 cut(s) 929
BfmI CTRYAG 4 cut(s) 139, 320, 540, 910
BfoI RGCGCY 1 cut(s) 737
BfuAI ACCTGC 1 cut(s) 547
BfuI GTATCC 1 cut(s) 776
BisI GCNGC 2 cut(s) 123, 506
BlsI GCNGC 2 cut(s) 124, 507
Bme1390I CCNGG 3 cut(s) 96, 375, 648
BmiI GGNNCC 3 cut(s) 408, 681, 878
BmrFI CCNGG 3 cut(s) 96, 375, 648
BmsI GCATC 3 cut(s) 167, 235, 464
BpiI GAAGAC 1 cut(s) 321
BplI GAGNNNNNCTC 2 cut(s) 830, 862
BpmI CTGGAG 2 cut(s) 69, 630
Bpu10I CCTNAGC 1 cut(s) 291
BsaAI YACGTR 1 cut(s) 470
BsaJI CCNNGG 4 cut(s) 73, 374, 647, 883
BsaWI WCCGGW 2 cut(s) 394, 458
BsaXI ACNNNNNCTCC 2 cut(s) 570, 600
Bsc4I CCNNNNNNNGG 1 cut(s) 68
Bse118I RCCGGY 1 cut(s) 721
Bse1I ACTGG 5 cut(s) 52, 220, 359, 613, 827
Bse3DI GCAATG 2 cut(s) 117, 444
BseAI TCCGGA 1 cut(s) 394
BseBI CCWGG 3 cut(s) 96, 375, 648
BseDI CCNNGG 4 cut(s) 73, 374, 647, 883
BseGI GGATG 3 cut(s) 455, 562, 949
BseLI CCNNNNNNNGG 1 cut(s) 68
BseMI GCAATG 2 cut(s) 117, 444
BseMII CTCAG 1 cut(s) 870
BseNI ACTGG 5 cut(s) 52, 220, 359, 613, 827
BseRI GAGGAG 2 cut(s) 624, 869
BseXI GCAGC 1 cut(s) 492
BsgI GTGCAG 1 cut(s) 283
BshFI GGCC 3 cut(s) 72, 358, 447
BsiHKAI GWGCWC 1 cut(s) 843
BsiSI CCGG 3 cut(s) 395, 459, 722
BslI CCNNNNNNNGG 1 cut(s) 68
BsmAI GTCTC 1 cut(s) 419
BsmI GAATGC 2 cut(s) 439, 828
BsnI GGCC 3 cut(s) 72, 358, 447
Bsp1286I GDGCHC 1 cut(s) 843
Bsp13I TCCGGA 1 cut(s) 394
Bsp143I GATC 4 cut(s) 37, 337, 547, 795
BspACI CCGC 1 cut(s) 123
BspANI GGCC 3 cut(s) 72, 358, 447
BspCNI CTCAG 1 cut(s) 869
BspEI TCCGGA 1 cut(s) 394
BspLI GGNNCC 3 cut(s) 408, 681, 878
BspMAI CTGCAG 1 cut(s) 544
BspMI ACCTGC 1 cut(s) 547
BspPI GGATC 1 cut(s) 803
BspQI GCTCTTC 1 cut(s) 848
BsrDI GCAATG 2 cut(s) 117, 444
BsrFI RCCGGY 1 cut(s) 721
BsrI ACTGG 5 cut(s) 52, 220, 359, 613, 827
BssAI RCCGGY 1 cut(s) 721
BssECI CCNNGG 4 cut(s) 73, 374, 647, 883
BssMI GATC 4 cut(s) 37, 337, 547, 795
BssT1I CCWWGG 1 cut(s) 73
Bst2UI CCWGG 3 cut(s) 96, 375, 648
Bst4CI ACNGT 2 cut(s) 155, 764
Bst6I CTCTTC 1 cut(s) 848
BstBAI YACGTR 1 cut(s) 470
BstDEI CTNAG 7 cut(s) 54, 252, 291, 299, 498, 518, 856
BstDSI CCRYGG 1 cut(s) 883
BstF5I GGATG 3 cut(s) 455, 562, 949
BstH2I RGCGCY 1 cut(s) 737
BstHHI GCGC 1 cut(s) 736
BstKTI GATC 4 cut(s) 40, 340, 550, 798
BstMAI GTCTC 1 cut(s) 419
BstMBI GATC 4 cut(s) 37, 337, 547, 795
BstMWI GCNNNNNNNGC 2 cut(s) 119, 731
BstNI CCWGG 3 cut(s) 96, 375, 648
BstSCI CCNGG 3 cut(s) 94, 373, 646
BstSFI CTRYAG 4 cut(s) 139, 320, 540, 910
BstV1I GCAGC 1 cut(s) 492
BstV2I GAAGAC 1 cut(s) 321
BstXI CCANNNNNNTGG 2 cut(s) 429, 654
BsuI GTATCC 1 cut(s) 776
BsuRI GGCC 3 cut(s) 72, 358, 447
BtgI CCRYGG 1 cut(s) 883
BtgZI GCGATG 1 cut(s) 212
BtsCI GGATG 3 cut(s) 455, 562, 949
BtsI GCAGTG 3 cut(s) 132, 238, 271
BtsIMutI CAGTG 5 cut(s) 132, 194, 238, 271, 352
BveI ACCTGC 1 cut(s) 547
CaiI CAGNNNCTG 1 cut(s) 20
CfoI GCGC 1 cut(s) 736
Cfr10I RCCGGY 1 cut(s) 721
CsiI ACCWGGT 1 cut(s) 94
Csp6I GTAC 2 cut(s) 366, 451
CviAII CATG 5 cut(s) 81, 272, 403, 429, 902
CviQI GTAC 2 cut(s) 366, 451
DdeI CTNAG 7 cut(s) 54, 252, 291, 299, 498, 518, 856
DpnI GATC 4 cut(s) 39, 339, 549, 797
DpnII GATC 4 cut(s) 37, 337, 547, 795
EaeI YGGCCR 1 cut(s) 356
Eam1104I CTCTTC 1 cut(s) 848
EarI CTCTTC 1 cut(s) 848
Ecl136II GAGCTC 1 cut(s) 841
Eco130I CCWWGG 1 cut(s) 73
Eco147I AGGCCT 1 cut(s) 447
Eco24I GRGCYC 1 cut(s) 843
Eco47III AGCGCT 1 cut(s) 735
Eco53kI GAGCTC 1 cut(s) 841
Eco57I CTGAAG 2 cut(s) 218, 819
Eco72I CACGTG 1 cut(s) 470
EcoICRI GAGCTC 1 cut(s) 841
EcoRII CCWGG 3 cut(s) 94, 373, 646
EcoT14I CCWWGG 1 cut(s) 73
EcoT38I GRGCYC 1 cut(s) 843
ErhI CCWWGG 1 cut(s) 73
FaeI CATG 5 cut(s) 84, 275, 406, 432, 905
FalI AAGNNNNNCTT 6 cut(s) 292, 324, 501, 533, 720, 752
FatI CATG 5 cut(s) 80, 271, 402, 428, 901
Fnu4HI GCNGC 2 cut(s) 123, 506
FokI GGATG 2 cut(s) 442, 549
FriOI GRGCYC 1 cut(s) 843
Fsp4HI GCNGC 2 cut(s) 123, 506
FspBI CTAG 1 cut(s) 929
GlaI GCGC 1 cut(s) 735
GluI GCNGC 2 cut(s) 123, 506
GsuI CTGGAG 2 cut(s) 69, 630
HaeII RGCGCY 1 cut(s) 737
HaeIII GGCC 3 cut(s) 72, 358, 447
HapII CCGG 3 cut(s) 395, 459, 722
HhaI GCGC 1 cut(s) 736
Hin1II CATG 5 cut(s) 84, 275, 406, 432, 905
Hin6I GCGC 1 cut(s) 734
HinP1I GCGC 1 cut(s) 734
HinfI GANTC 4 cut(s) 17, 58, 391, 788
HpaII CCGG 3 cut(s) 395, 459, 722
HphI GGTGA 4 cut(s) 670, 711, 857, 899
Hpy166II GTNNAC 1 cut(s) 758
Hpy188I TCNGA 5 cut(s) 22, 42, 753, 838, 859
Hpy188III TCNNGA 2 cut(s) 395, 422
Hpy8I GTNNAC 1 cut(s) 758
HpyAV CCTTC 7 cut(s) 193, 428, 437, 655, 670, 779, 843
HpyCH4III ACNGT 2 cut(s) 155, 764
HpyCH4IV ACGT 1 cut(s) 469
HpyF10VI GCNNNNNNNGC 2 cut(s) 119, 731
HpyF3I CTNAG 7 cut(s) 54, 252, 291, 299, 498, 518, 856
HpySE526I ACGT 1 cut(s) 469
Hsp92II CATG 5 cut(s) 84, 275, 406, 432, 905
HspAI GCGC 1 cut(s) 734
Kpn2I TCCGGA 1 cut(s) 394
Kzo9I GATC 4 cut(s) 37, 337, 547, 795
LguI GCTCTTC 1 cut(s) 848
LmnI GCTCC 3 cut(s) 50, 412, 882
Lsp1109I GCAGC 1 cut(s) 492
LweI GCATC 3 cut(s) 167, 235, 464
MabI ACCWGGT 1 cut(s) 94
MaeI CTAG 1 cut(s) 929
MaeII ACGT 1 cut(s) 469
MaeIII GTNAC 4 cut(s) 5, 266, 378, 717
MalI GATC 4 cut(s) 39, 339, 549, 797
MboI GATC 4 cut(s) 37, 337, 547, 795
MboII GAAGA 4 cut(s) 142, 293, 326, 835
MfeI CAATTG 1 cut(s) 474
MhlI GDGCHC 1 cut(s) 843
MlsI TGGCCA 1 cut(s) 358
MluCI AATT 4 cut(s) 474, 851, 935, 951
MluNI TGGCCA 1 cut(s) 358
MlyI GAGTC 1 cut(s) 385
MnlI CCTC 3 cut(s) 524, 645, 890
Mox20I TGGCCA 1 cut(s) 358
MroI TCCGGA 1 cut(s) 394
MroXI GAANNNNTTC 1 cut(s) 708
MscI TGGCCA 1 cut(s) 358
MslI CAYNNNNRTG 1 cut(s) 231
Msp20I TGGCCA 1 cut(s) 358
MspI CCGG 3 cut(s) 395, 459, 722
MspR9I CCNGG 3 cut(s) 96, 375, 648
MunI CAATTG 1 cut(s) 474
Mva1269I GAATGC 2 cut(s) 439, 828
MvaI CCWGG 3 cut(s) 96, 375, 648
MwoI GCNNNNNNNGC 2 cut(s) 119, 731
NdeII GATC 4 cut(s) 37, 337, 547, 795
NlaIII CATG 5 cut(s) 84, 275, 406, 432, 905
NlaIV GGNNCC 3 cut(s) 408, 681, 878
NmuCI GTSAC 3 cut(s) 266, 378, 717
PaqCI CACCTGC 1 cut(s) 547
PceI AGGCCT 1 cut(s) 447
PciSI GCTCTTC 1 cut(s) 848
PctI GAATGC 2 cut(s) 439, 828
PdmI GAANNNNTTC 1 cut(s) 708
PfeI GAWTC 3 cut(s) 17, 58, 788
PflMI CCANNNNNTGG 1 cut(s) 68
PkrI GCNGC 2 cut(s) 124, 507
PleI GAGTC 1 cut(s) 385
PmaCI CACGTG 1 cut(s) 470
PmlI CACGTG 1 cut(s) 470
PpsI GAGTC 1 cut(s) 385
Ppu21I YACGTR 1 cut(s) 470
PsiI TTATAA 2 cut(s) 245, 921
Psp124BI GAGCTC 1 cut(s) 843
Psp6I CCWGG 3 cut(s) 94, 373, 646
PspCI CACGTG 1 cut(s) 470
PspGI CCWGG 3 cut(s) 94, 373, 646
PspN4I GGNNCC 3 cut(s) 408, 681, 878
PstI CTGCAG 1 cut(s) 544
PstNI CAGNNNCTG 1 cut(s) 20
RsaI GTAC 2 cut(s) 367, 452
RsaNI GTAC 2 cut(s) 366, 451
RseI CAYNNNNRTG 1 cut(s) 231
SacI GAGCTC 1 cut(s) 843
SapI GCTCTTC 1 cut(s) 848
SatI GCNGC 2 cut(s) 123, 506
Sau3AI GATC 4 cut(s) 37, 337, 547, 795
SchI GAGTC 1 cut(s) 385
ScrFI CCNGG 3 cut(s) 96, 375, 648
SduI GDGCHC 1 cut(s) 843
SexAI ACCWGGT 1 cut(s) 94
SfaNI GCATC 3 cut(s) 167, 235, 464
SfcI CTRYAG 4 cut(s) 139, 320, 540, 910
SmiMI CAYNNNNRTG 1 cut(s) 231
Sse9I AATT 4 cut(s) 474, 851, 935, 951
SseBI AGGCCT 1 cut(s) 447
SsiI CCGC 1 cut(s) 123
SspI AATATT 1 cut(s) 672
SspMI CTAG 1 cut(s) 929
SstI GAGCTC 1 cut(s) 843
StuI AGGCCT 1 cut(s) 447
StyD4I CCNGG 3 cut(s) 94, 373, 646
StyI CCWWGG 1 cut(s) 73
TaaI ACNGT 2 cut(s) 155, 764
TaiI ACGT 1 cut(s) 472
TaqII GACCGA 1 cut(s) 95
TasI AATT 4 cut(s) 474, 851, 935, 951
TauI GCSGC 1 cut(s) 125
TfiI GAWTC 3 cut(s) 17, 58, 788
TscAI CASTG 5 cut(s) 132, 201, 238, 271, 359
TseFI GTSAC 3 cut(s) 266, 378, 717
TseI GCWGC 1 cut(s) 505
Tsp45I GTSAC 3 cut(s) 266, 378, 717
TspDTI ATGAA 4 cut(s) 189, 605, 801, 948
TspGWI ACGGA 1 cut(s) 872
TspRI CASTG 5 cut(s) 132, 201, 238, 271, 359
Van91I CCANNNNNTGG 1 cut(s) 68
XapI RAATTY 2 cut(s) 851, 951
XmnI GAANNNNTTC 1 cut(s) 708
XspI CTAG 1 cut(s) 929
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.