Rmu_sc0000738.1_g000025

Disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000738.1
OG0000085
Physical Location & Seq
Reverse (-)
101828 .. 105617
3790 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000738.1_g000025.1.cds

Sequence Viewer

Length: 3489 bp
atggcctcgagcagccaaagagcctctgaatcttttccttcagccaagtcaatggctctcaagtggaagtatgatgtgtttttgagttttaggggtgaagacattcggaacaattttctctcttatttataccatgaattgcaaatcatcagaaggattaatacattcaaggatgacgaagtgcttgaagtcggggagcctatttctccaagtctcctaaaagcaatcgatgaatcaaggtttgctattattgttctgtcgccaaactatgcttcttctccatggtgtttggaggaacttgcaaaaattgttcattgcatggaagacaccaggagaattctgccacttttttatcatgtggaaccagctgatgtacgacatcaaaaaaatagttttgaagtagccttcactaagcatgaagaaaagtcaaggtatgacacagagaaggtgaagcagtggagagatgctttaaaaaaagtggctaatttatctggatggcatacgcagagatatcagacagaaagagaacttgttgaagccattgcagattatgtgtgcactaaggtacgaccaattgaaatggagttctcaaagtccactggagattttgaagcatttgaagcaacaaggcaagccatggatgaggtctggaaggcactaaaagatgataaggtcactgccattgcggtgtacggaatgggaggtgttgggaagacaactatggtagaatatgtcggtgtacaagctcaaaatagtgggattttccatcatgtgattatggttgttatatcccaaaggcccaacttgagaaatatccaaggcgcattggcagatctgctgggccttgaattgaaggaggagacagacattggaagagccaatagactgaagaaggagataatgagaagaaataagatccttataatcttggatgacatttgggagagaatagacttgtcaagcatagggatccccagttacgacaagcttcagaaatgcaattcaaaagtcctactcaccacaaggagattgaatgtttgtcattccatggaaacacaaccgagcattcctctcaatatcttatcagaagaagattcttggaacttgtttctgaagaaagcaagaaagtctatcgaaaaatcaactgaattctatgatgtagcgaggaaggtagccagcgagtgtgctggtctccctgttgcactgagagcagttgcgagggcacttggagacaaagattttgaggaatggaaagaagcagctcgaaagctggaaatgtctcaacgtgctagcctcgatgatgatggagatgtgtttaaatgtataaagttaagttatgattacttggacagtattgatgccaagtcatgcttcttgctgtgctgccttttcccagaagatgatgatatcctaatagaagacttgatgaagtatgggtttggaaaaggattgtttcgagatgtcaacagcacaatagaagatgccagagtcaaagcaaatttagtgactaaataccttaaagcttcttgtttgcttgtggacggtaaagaggatggatgcgtaaggatgcatgatgtcattcgagatatggccatgtcaattgcattatctgaagatggttatgggtttttggtaaaaactcgttgtgaattgaaagaatggccaatggatgcacatgagggatactcggcaatctcattaatggagaacaacatttccaagctgcctaatgagttggtatgttcaaaactccaaattttattgctacagagaaacattggtttgaaaaatatcccagacactttttttcagagtcccaaggaattaaaagtcttagatcttagccgcaccaatattttgttaagatccccatcattcaatctcataaccaacctccaagctctgtacttagattattgtgagtcaatgattgacatatccatgcttaaaagcctgaaaaaacttgagattcttagtataagaggatgtgatattaaggaatttccaagagaaataggacaactgaccaatttgaggatgttggacctcactaatattggagacattgatacagttccatctcaagtgatttcgaggttgcacagattagaagaactgtacatgaagtgtaaatttggggattggggcagtaaagttgagggaggcttatattctttcttttttggtaaaaatgctggctttgaagagttaactgacttgtcgcatctaaacattttggaggtgtccatatttggtccagggtgcttgcctaaaaccgttgagttcgatccaaattgggtaagcttcgatatatgtatcaacaaaaactcgtttaggggaatatcctctctgcaacatgaccattcacatcatcattcaagaactctgagccttgacacaaccatcaatacattaccggattggtttatcaacgtagtgacaaagaaagcagagacgatattttatttcgagtgcaagggcttaaatagcattgttgtagaacatgaccatggaagactacacagactgaagcggctcgctgtacattccaatgacaacttgaaagagttgttgaacctaactacgcgggtctcaaatgaacctgtgtttgagaatttggaagaattgcatctcaaggacatgggttgcctgaagaagttatgtgttggtgaattaccacttgggtctctatggaagctgaaggtattggacatcagacagtgtcgtgacttggtcgatgaacttttaccatcaaatttactgcgaatactggaaaatatggaacaaataatttgtcatgatttgaggcaaatgaaatatgtgtttggatttgaagggctgaagccagaacagattatcttgacgaaattgagaaagatgagattgtacaatcaacatagggtgttacgcatatggaaaggtcctgctccacatgcagtcttccatagtcttcgaagtttgacagttgaatactacactaaactgaaatacctcttcacatccaatgttgctcaatgtcttttgcatttggaagacctgtggctacaaggttgcagtagcttggacagaattattgaaacaagtgatgaggaaatgatcgtctttccagaattgaagaactttattttgaaacatcttccacagctgaaaagtttttgcagtcctatttcagtagatattgaattcccttcattggaacacttgtatgtgcgtgactgcccccagttgataatctgtgcttttgacttcaaaagcaggaaccatgtaaaactgaatgatgaacaacatatgtcgtctctgtgcagaagaatgacgcgcagggaagagacaatagaaagtgatctattccagaagcagattactgtgcagttaccaatatggatgctgctgctgcagtgctgtttccctcctctatgcatgttgcctggactggctgatcagcgggttttacagttaaatgtagatggagctggtggtttacctccgtga

Protein Analysis

1162

Amino Acids

133.58

Weight (kDa)

6.24

Isoelectric Point (pI)

47.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000085)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g05721 FvH4_2g05721 FvH4_3g35820 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35920 FvH4_3g38670 FvH4_3g43650 FvH4_3g43650 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44070 FvH4_5g01271 FvH4_5g02970 FvH4_5g02970 FvH4_5g02970 FvH4_5g27640 FvH4_5g27640 FvH4_5g27640 FvH4_6g05393 FvH4_6g52372 FvH4_7g06680 FvH4_7g12671 FvH4_7g13640 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31510
malus_domestica MD09G1227900.v1.1 MD11G1019800.v1.1 MD11G1020500.v1.1
prunus_persica Prupe.1G542800_v2.0.a1 Prupe.1G542800_v2.0.a1
pyrus_communis pycom11g01460 pycom11g01490 pycom11g01530 pycom11g01570 pycom15g35490
rosa_chinensis RchiOBHm_Chr1g0353711 RchiOBHm_Chr3g0473211 RchiOBHm_Chr3g0473291 RchiOBHm_Chr3g0473341 RchiOBHm_Chr3g0473381 RchiOBHm_Chr3g0473391 RchiOBHm_Chr3g0473441 RchiOBHm_Chr3g0473481 RchiOBHm_Chr3g0473531 RchiOBHm_Chr3g0473561 RchiOBHm_Chr3g0473571 RchiOBHm_Chr3g0483491 RchiOBHm_Chr3g0488681 RchiOBHm_Chr5g0059311 RchiOBHm_Chr5g0061291 RchiOBHm_Chr5g0061301 RchiOBHm_Chr5g0061331 RchiOBHm_Chr5g0064081 RchiOBHm_Chr5g0064111 RchiOBHm_Chr5g0064151 RchiOBHm_Chr5g0064171 RchiOBHm_Chr5g0069721 RchiOBHm_Chr5g0069731 RchiOBHm_Chr5g0069741 RchiOBHm_Chr5g0078251 RchiOBHm_Chr5g0078301 RchiOBHm_Chr5g0079511 RchiOBHm_Chr5g0079791 RchiOBHm_Chr5g0079811 RchiOBHm_Chr5g0079861 RchiOBHm_Chr5g0079881 RchiOBHm_Chr5g0080241 RchiOBHm_Chr5g0080281 RchiOBHm_Chr5g0080371 RchiOBHm_Chr5g0080671 RchiOBHm_Chr6g0256601 RchiOBHm_Chr6g0274791 RchiOBHm_Chr7g0221971 RchiOBHm_Chr7g0221981
rosa_laevigata RLG00000002106 RLG00000013523 RLG00000014806 RLG00000024010 RLG00000035451 RLG00000035455 RLG00000035464 RLG00000035705 RLG00000036094 RLG00000036817 RLG00000036825 RLG00000036826 RLG00000036848
rosa_multiflora Rmu_co8200400.1_g000001 Rmu_co8473147.1_g000001 Rmu_sc0000394.1_g000030 Rmu_sc0000555.1_g000030 Rmu_sc0000595.1_g000002 Rmu_sc0000595.1_g000006 Rmu_sc0000595.1_g000029 Rmu_sc0000689.1_g000018 Rmu_sc0000689.1_g000032 Rmu_sc0000689.1_g000041 Rmu_sc0000738.1_g000025 Rmu_sc0000826.1_g000016 Rmu_sc0000908.1_g000016 Rmu_sc0000908.1_g000019 Rmu_sc0000908.1_g000021 Rmu_sc0001208.1_g000087 Rmu_sc0001639.1_g000004 Rmu_sc0002075.1_g000004 Rmu_sc0002075.1_g000009 Rmu_sc0002187.1_g000042 Rmu_sc0002187.1_g000043 Rmu_sc0002187.1_g000060 Rmu_sc0002513.1_g000025 Rmu_sc0002983.1_g000008 Rmu_sc0003012.1_g000004 Rmu_sc0003069.1_g000019 Rmu_sc0003069.1_g000020 Rmu_sc0003069.1_g000047 Rmu_sc0003069.1_g000051 Rmu_sc0003069.1_g000053 Rmu_sc0003131.1_g000014 Rmu_sc0003514.1_g000003 Rmu_sc0003547.1_g000006 Rmu_sc0003547.1_g000008 Rmu_sc0004325.1_g000021 Rmu_sc0004482.1_g000004 Rmu_sc0004482.1_g000022 Rmu_sc0005006.1_g000004 Rmu_sc0005006.1_g000009 Rmu_sc0005006.1_g000010 Rmu_sc0005194.1_g000002 Rmu_sc0005194.1_g000003 Rmu_sc0005834.1_g000002 Rmu_sc0005947.1_g000023 Rmu_sc0006792.1_g000026 Rmu_sc0007612.1_g000001 Rmu_sc0007793.1_g000024 Rmu_sc0007793.1_g000025 Rmu_sc0008050.1_g000015 Rmu_sc0008336.1_g000003 Rmu_sc0010248.1_g000002 Rmu_sc0011921.1_g000001 Rmu_sc0011921.1_g000006 Rmu_sc0012138.1_g000001 Rmu_sc0016164.1_g000015 Rmu_sc0018807.1_g000005 Rmu_sc0030948.1_g000001 Rmu_sc0042587.1_g000001 Rmu_ssc0000170.1_g000020 Rmu_ssc0000170.1_g000026 Rmu_ssc0000170.1_g000029
rosa_roxburghii Rroxscaffold_1G00003040 Rroxscaffold_1G00003080 Rroxscaffold_1G00003430 Rroxscaffold_1G00003490 Rroxscaffold_1G00011370 Rroxscaffold_1G00016780 Rroxscaffold_1G00019390 Rroxscaffold_1G00019400 Rroxscaffold_1G00019420 Rroxscaffold_1G00021170 Rroxscaffold_3G00237530 Rroxscaffold_3G00246470 Rroxscaffold_4G00301730 Rroxscaffold_4G00309300 Rroxscaffold_6G00398250 Rroxscaffold_6G00398270 Rroxscaffold_6G00398280 Rroxscaffold_6G00408070 Rroxscaffold_7G00193940 Rroxscaffold_7G00209570
rosa_rugosa Rorug01G0237100 Rorug03G0098200 Rorug03G0132200 Rorug03G0132400 Rorug03G0132500 Rorug03G0132500 Rorug03G0132500 Rorug03G0132700 Rorug03G0132800 Rorug03G0205900 Rorug03G0206100 Rorug03G0206100 Rorug03G0206300 Rorug03G0206400 Rorug03G0206400 Rorug03G0240700 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug05G0322400 Rorug05G0339300 Rorug05G0339500 Rorug05G0362200 Rorug05G0362300 Rorug05G0362400 Rorug05G0362600 Rorug05G0362700 Rorug05G0362800 Rorug05G0363100 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0459900 Rorug05G0464600 Rorug05G0465000 Rorug05G0465100 Rorug05G0465200 Rorug05G0466000 Rorug05G0466300 Rorug05G0466400 Rorug05G0466500 Rorug05G0466600 Rorug05G0466700 Rorug05G0466700 Rorug05G0466700 Rorug05G0466800 Rorug05G0466900 Rorug05G0468100 Rorug05G0562200 Rorug05G0562300 Rorug06G0084400 Rorug06G0084500 Rorug06G0084500 Rorug06G0084600 Rorug07G0136400 Rorug07G0204500 Rorug07G0204600 Rorug07G0221500
rosa_samantha Rh5CG438200 Rh5CG569900 Rh6AG080700 Rh7CG362800 Rh7DG275900 Rh7DG343100
rosa_wichuraiana Rw0G004790 Rw0G008160 Rw0G008170 Rw0G008200 Rw0G008210 Rw0G012980 Rw0G013670 Rw0G019920 Rw0G020380 Rw0G022790 Rw0G022800 Rw0G023350 Rw1G005530 Rw1G021740 Rw3G013910 Rw3G015980 Rw3G023020 Rw3G023030 Rw3G025580 Rw5G027180 Rw5G037760 Rw5G037770 Rw5G037780 Rw5G037790 Rw5G037810 Rw5G037820 Rw5G039500 Rw5G039520 Rw5G039530 Rw5G039540 Rw5G039550 Rw5G039570 Rw5G039580 Rw5G039610 Rw5G039630 Rw5G039660 Rw5G042590 Rw5G047840 Rw5G048170 Rw5G048400 Rw5G048470 Rw5G048540 Rw6G007030 Rw6G007080 Rw6G007460 Rw6G017430 Rw7G023150 Rw7G023260 Rw7G029260 Rw7G029270 Rw7G030950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 923
AccII CGCG 2 cut(s) 2587, 3316
AciI CCGC 5 cut(s) 686, 1846, 2533, 2587, 3442
AclWI GGATC 5 cut(s) 910, 964, 977, 1860, 2282
AcoI YGGCCR 2 cut(s) 1590, 1661
AcsI RAATTY 9 cut(s) 336, 1148, 1498, 1755, 2000, 2132, 2614, 2755, 3182
AcuI CTGAAG 9 cut(s) 24, 908, 974, 1133, 1632, 2549, 2672, 2720, 2861
AfaI GTAC 8 cut(s) 375, 567, 692, 741, 1907, 2120, 2544, 2888
AfiI CCNNNNNNNGG 2 cut(s) 2034, 3193
AjnI CCWGG 3 cut(s) 329, 2257, 3424
AjuI GAANNNNNNNTTGG 6 cut(s) 256, 288, 1355, 1387, 2664, 2696
AloI GAACNNNNNNTCC 2 cut(s) 1700, 1732
Alw21I GWGCWC 1 cut(s) 560
Alw44I GTGCAC 1 cut(s) 556
AlwI GGATC 5 cut(s) 910, 964, 977, 1860, 2282
Ama87I CYCGRG 1 cut(s) 7
AoxI GGCC 5 cut(s) 3, 797, 841, 1590, 1661
ApaLI GTGCAC 1 cut(s) 556
ApeKI GCWGC 7 cut(s) 12, 1259, 1383, 1723, 3385, 3388, 3391
ApoI RAATTY 9 cut(s) 336, 1148, 1498, 1755, 2000, 2132, 2614, 2755, 3182
ArsI GACNNNNNNTTYG 4 cut(s) 1223, 1255, 2779, 2811
AseI ATTAAT 2 cut(s) 159, 1700
Asp700I GAANNNNTTC 2 cut(s) 33, 102
AspLEI GCGC 2 cut(s) 824, 3318
AspS9I GGNCC 5 cut(s) 798, 841, 2044, 2255, 2921
AsuHPI GGTGA 4 cut(s) 107, 460, 1009, 2681
AsuII TTCGAA 1 cut(s) 2953
AsuNHI GCTAGC 1 cut(s) 1289
AvaI CYCGRG 1 cut(s) 7
AvaII GGWCC 3 cut(s) 2044, 2255, 2921
BaeGI GKGCMC 2 cut(s) 560, 1225
BalI TGGCCA 2 cut(s) 1592, 1663
BamHI GGATCC 1 cut(s) 969
BarI GAAGNNNNNNTAC 2 cut(s) 145, 177
BbsI GAAGAC 8 cut(s) 105, 330, 719, 1425, 2521, 2932, 2942, 3039
Bbv12I GWGCWC 1 cut(s) 560
BbvI GCAGC 7 cut(s) 24, 1271, 1370, 1710, 3372, 3375, 3378
BciT130I CCWGG 3 cut(s) 331, 2259, 3426
BciVI GTATCC 1 cut(s) 1676
BclI TGATCA 1 cut(s) 3436
BfaI CTAG 1 cut(s) 1290
BfmI CTRYAG 2 cut(s) 1766, 3392
BfuI GTATCC 1 cut(s) 1676
BglII AGATCT 2 cut(s) 832, 1837
BisI GCNGC 9 cut(s) 13, 1260, 1384, 1724, 1846, 2534, 3386, 3389, 3392
BlsI GCNGC 9 cut(s) 14, 1261, 1385, 1725, 1847, 2535, 3387, 3390, 3393
Bme1390I CCNGG 3 cut(s) 331, 2259, 3426
Bme18I GGWCC 3 cut(s) 2044, 2255, 2921
BmeT110I CYCGRG 1 cut(s) 7
BmgT120I GGNCC 5 cut(s) 798, 841, 2044, 2255, 2921
BmiI GGNNCC 4 cut(s) 198, 363, 971, 3260
BmrFI CCNGG 3 cut(s) 331, 2259, 3426
BmrI ACTGGG 2 cut(s) 969, 3217
BmsI GCATC 9 cut(s) 454, 1348, 1471, 1547, 1557, 1660, 2233, 2638, 3372
BmtI GCTAGC 1 cut(s) 1293
BmuI ACTGGG 2 cut(s) 969, 3217
BpiI GAAGAC 8 cut(s) 105, 330, 719, 1425, 2521, 2932, 2942, 3039
BplI GAGNNNNNCTC 4 cut(s) 1054, 1086, 1670, 1702
BpmI CTGGAG 1 cut(s) 621
Bpu14I TTCGAA 1 cut(s) 2953
BpuEI CTTGAG 5 cut(s) 44, 826, 1985, 2067, 2618
Bsa29I ATCGAT 1 cut(s) 228
BsaBI GATNNNNATC 1 cut(s) 1870
BsaI GGTCTC 3 cut(s) 1196, 2596, 2691
BsaJI CCNNGG 7 cut(s) 281, 636, 817, 1047, 1818, 2258, 2509
BsaWI WCCGGW 1 cut(s) 2416
Bsc4I CCNNNNNNNGG 2 cut(s) 2034, 3193
Bse1I ACTGG 5 cut(s) 604, 975, 2775, 3223, 3435
Bse3DI GCAATG 3 cut(s) 313, 540, 681
Bse8I GATNNNNATC 1 cut(s) 1870
BseBI CCWGG 3 cut(s) 331, 2259, 3426
BseCI ATCGAT 1 cut(s) 228
BseDI CCNNGG 7 cut(s) 281, 636, 817, 1047, 1818, 2258, 2509
BseJI GATNNNNATC 1 cut(s) 1870
BseLI CCNNNNNNNGG 2 cut(s) 2034, 3193
BseMI GCAATG 3 cut(s) 313, 540, 681
BseMII CTCAG 2 cut(s) 1196, 2378
BseNI ACTGG 5 cut(s) 604, 975, 2775, 3223, 3435
BseRI GAGGAG 2 cut(s) 872, 3399
BseSI GKGCMC 2 cut(s) 560, 1225
BseXI GCAGC 7 cut(s) 24, 1271, 1370, 1710, 3372, 3375, 3378
BseYI CCCAGC 1 cut(s) 838
BsgI GTGCAG 2 cut(s) 3322, 3386
Bsh1236I CGCG 2 cut(s) 2587, 3316
BshFI GGCC 5 cut(s) 5, 799, 843, 1592, 1663
BshVI ATCGAT 1 cut(s) 228
BsiHKAI GWGCWC 1 cut(s) 560
BsiHKCI CYCGRG 1 cut(s) 7
BsiSI CCGG 1 cut(s) 2417
BslFI GGGAC 1 cut(s) 1800
BslI CCNNNNNNNGG 2 cut(s) 2034, 3193
BsmBI CGTCTC 2 cut(s) 2447, 3300
BsmFI GGGAC 1 cut(s) 1800
BsmI GAATGC 1 cut(s) 1065
BsnI GGCC 5 cut(s) 5, 799, 843, 1592, 1663
Bso31I GGTCTC 3 cut(s) 1196, 2596, 2691
BsoBI CYCGRG 1 cut(s) 7
Bsp119I TTCGAA 1 cut(s) 2953
Bsp1286I GDGCHC 2 cut(s) 560, 1225
Bsp1407I TGTACA 4 cut(s) 739, 2118, 2542, 2886
Bsp143I GATC 9 cut(s) 832, 915, 969, 1837, 1865, 2287, 3096, 3340, 3436
Bsp19I CCATGG 4 cut(s) 281, 636, 1047, 2509
BspACI CCGC 5 cut(s) 686, 1846, 2533, 2587, 3442
BspANI GGCC 5 cut(s) 5, 799, 843, 1592, 1663
BspCNI CTCAG 2 cut(s) 1197, 2379
BspDI ATCGAT 1 cut(s) 228
BspFNI CGCG 2 cut(s) 2587, 3316
BspHI TCATGA 1 cut(s) 2797
BspLI GGNNCC 4 cut(s) 198, 363, 971, 3260
BspMAI CTGCAG 1 cut(s) 3396
BspOI GCTAGC 1 cut(s) 1293
BspPI GGATC 5 cut(s) 910, 964, 977, 1860, 2282
BspQI GCTCTTC 1 cut(s) 868
BspT104I TTCGAA 1 cut(s) 2953
BspTNI GGTCTC 3 cut(s) 1196, 2596, 2691
BsrDI GCAATG 3 cut(s) 313, 540, 681
BsrGI TGTACA 4 cut(s) 739, 2118, 2542, 2886
BsrI ACTGG 5 cut(s) 604, 975, 2775, 3223, 3435
BssECI CCNNGG 7 cut(s) 281, 636, 817, 1047, 1818, 2258, 2509
BssMI GATC 9 cut(s) 832, 915, 969, 1837, 1865, 2287, 3096, 3340, 3436
BssT1I CCWWGG 6 cut(s) 281, 636, 817, 1047, 1818, 2509
Bst2UI CCWGG 3 cut(s) 331, 2259, 3426
Bst4CI ACNGT 9 cut(s) 1352, 1544, 2074, 2118, 2278, 2721, 2965, 3364, 3453
Bst6I CTCTTC 4 cut(s) 868, 2199, 2999, 3318
BstAUI TGTACA 4 cut(s) 739, 2118, 2542, 2886
BstBI TTCGAA 1 cut(s) 2953
BstC8I GCNNGC 6 cut(s) 633, 1177, 1291, 2197, 2267, 2538
BstDEI CTNAG 8 cut(s) 411, 561, 1205, 1834, 1841, 1909, 1973, 2387
BstDSI CCRYGG 4 cut(s) 281, 636, 1047, 2509
BstFNI CGCG 2 cut(s) 2587, 3316
BstHHI GCGC 2 cut(s) 824, 3318
BstKTI GATC 9 cut(s) 835, 918, 972, 1840, 1868, 2290, 3099, 3343, 3439
BstMBI GATC 9 cut(s) 832, 915, 969, 1837, 1865, 2287, 3096, 3340, 3436
BstMWI GCNNNNNNNGC 5 cut(s) 620, 1208, 2487, 2933, 3391
BstNI CCWGG 3 cut(s) 331, 2259, 3426
BstNSI RCATGY 2 cut(s) 2936, 3421
BstSCI CCNGG 3 cut(s) 329, 2257, 3424
BstSFI CTRYAG 2 cut(s) 1766, 3392
BstSLI GKGCMC 2 cut(s) 560, 1225
BstUI CGCG 2 cut(s) 2587, 3316
BstV1I GCAGC 7 cut(s) 24, 1271, 1370, 1710, 3372, 3375, 3378
BstV2I GAAGAC 8 cut(s) 105, 330, 719, 1425, 2521, 2932, 2942, 3039
BstX2I RGATCY 5 cut(s) 832, 915, 969, 1837, 1865
BstXI CCANNNNNNTGG 1 cut(s) 52
BstYI RGATCY 5 cut(s) 832, 915, 969, 1837, 1865
Bsu15I ATCGAT 1 cut(s) 228
BsuI GTATCC 1 cut(s) 1676
BsuRI GGCC 5 cut(s) 5, 799, 843, 1592, 1663
BsuTUI ATCGAT 1 cut(s) 228
BtgI CCRYGG 4 cut(s) 281, 636, 1047, 2509
BtsI GCAGTG 3 cut(s) 461, 675, 3401
BtsIMutI CAGTG 6 cut(s) 461, 597, 675, 1202, 2726, 3401
Cac8I GCNNGC 6 cut(s) 633, 1177, 1291, 2197, 2267, 2538
CciI TCATGA 1 cut(s) 2797
CfoI GCGC 2 cut(s) 824, 3318
Cfr13I GGNCC 5 cut(s) 798, 841, 2044, 2255, 2921
ClaI ATCGAT 1 cut(s) 228
CseI GACGC 1 cut(s) 3322
Csp6I GTAC 8 cut(s) 374, 566, 691, 740, 1906, 2119, 2543, 2887
CviQI GTAC 8 cut(s) 374, 566, 691, 740, 1906, 2119, 2543, 2887
DdeI CTNAG 8 cut(s) 411, 561, 1205, 1834, 1841, 1909, 1973, 2387
DpnI GATC 9 cut(s) 834, 917, 971, 1839, 1867, 2289, 3098, 3342, 3438
DpnII GATC 9 cut(s) 832, 915, 969, 1837, 1865, 2287, 3096, 3340, 3436
DraI TTTAAA 2 cut(s) 471, 1318
EaeI YGGCCR 2 cut(s) 1590, 1661
Eam1104I CTCTTC 4 cut(s) 868, 2199, 2999, 3318
EarI CTCTTC 4 cut(s) 868, 2199, 2999, 3318
Eco130I CCWWGG 6 cut(s) 281, 636, 817, 1047, 1818, 2509
Eco31I GGTCTC 3 cut(s) 1196, 2596, 2691
Eco32I GATATC 2 cut(s) 512, 1408
Eco47I GGWCC 3 cut(s) 2044, 2255, 2921
Eco57I CTGAAG 9 cut(s) 24, 908, 974, 1133, 1632, 2549, 2672, 2720, 2861
Eco88I CYCGRG 1 cut(s) 7
EcoO109I RGGNCCY 1 cut(s) 2921
EcoRI GAATTC 3 cut(s) 336, 1148, 3182
EcoRII CCWGG 3 cut(s) 329, 2257, 3424
EcoRV GATATC 2 cut(s) 512, 1408
EcoT14I CCWWGG 6 cut(s) 281, 636, 817, 1047, 1818, 2509
EcoT22I ATGCAT 2 cut(s) 1572, 3419
ErhI CCWWGG 6 cut(s) 281, 636, 817, 1047, 1818, 2509
Esp3I CGTCTC 2 cut(s) 2447, 3300
FalI AAGNNNNNCTT 2 cut(s) 1355, 1387
FaqI GGGAC 1 cut(s) 1800
FauI CCCGC 2 cut(s) 2580, 3435
FauNDI CATATG 2 cut(s) 2912, 3288
FbaI TGATCA 1 cut(s) 3436
Fnu4HI GCNGC 9 cut(s) 13, 1260, 1384, 1724, 1846, 2534, 3386, 3389, 3392
Fsp4HI GCNGC 9 cut(s) 13, 1260, 1384, 1724, 1846, 2534, 3386, 3389, 3392
FspBI CTAG 1 cut(s) 1290
GlaI GCGC 2 cut(s) 823, 3317
GluI GCNGC 9 cut(s) 13, 1260, 1384, 1724, 1846, 2534, 3386, 3389, 3392
GsaI CCCAGC 1 cut(s) 842
GsuI CTGGAG 1 cut(s) 621
HaeIII GGCC 5 cut(s) 5, 799, 843, 1592, 1663
HapII CCGG 1 cut(s) 2417
HgaI GACGC 1 cut(s) 3322
HhaI GCGC 2 cut(s) 824, 3318
Hin6I GCGC 2 cut(s) 822, 3316
HinP1I GCGC 2 cut(s) 822, 3316
HincII GTYRAC 2 cut(s) 1465, 2211
HindII GTYRAC 2 cut(s) 1465, 2211
HindIII AAGCTT 3 cut(s) 986, 1521, 2302
HinfI GANTC 7 cut(s) 29, 233, 1094, 1488, 1813, 1922, 1969
HpaI GTTAAC 1 cut(s) 2211
HpaII CCGG 1 cut(s) 2417
HphI GGTGA 4 cut(s) 107, 460, 1009, 2681
Hpy166II GTNNAC 8 cut(s) 558, 597, 691, 740, 1465, 1540, 2211, 3479
Hpy8I GTNNAC 8 cut(s) 558, 597, 691, 740, 1465, 1540, 2211, 3479
HpyCH4III ACNGT 9 cut(s) 1352, 1544, 2074, 2118, 2278, 2721, 2965, 3364, 3453
HpyCH4IV ACGT 2 cut(s) 1285, 2433
HpyF10VI GCNNNNNNNGC 5 cut(s) 620, 1208, 2487, 2933, 3391
HpyF3I CTNAG 8 cut(s) 411, 561, 1205, 1834, 1841, 1909, 1973, 2387
HpySE526I ACGT 2 cut(s) 1285, 2433
HspAI GCGC 2 cut(s) 822, 3316
Ksp22I TGATCA 1 cut(s) 3436
KspAI GTTAAC 1 cut(s) 2211
Kzo9I GATC 9 cut(s) 832, 915, 969, 1837, 1865, 2287, 3096, 3340, 3436
LguI GCTCTTC 1 cut(s) 868
LmnI GCTCC 3 cut(s) 196, 2932, 3467
Lsp1109I GCAGC 7 cut(s) 24, 1271, 1370, 1710, 3372, 3375, 3378
LweI GCATC 9 cut(s) 454, 1348, 1471, 1547, 1557, 1660, 2233, 2638, 3372
MaeI CTAG 1 cut(s) 1290
MaeII ACGT 2 cut(s) 1285, 2433
MaeIII GTNAC 8 cut(s) 673, 977, 1504, 2437, 2726, 2904, 3212, 3369
MalI GATC 9 cut(s) 834, 917, 971, 1839, 1867, 2289, 3098, 3342, 3438
MboI GATC 9 cut(s) 832, 915, 969, 1837, 1865, 2287, 3096, 3340, 3436
MfeI CAATTG 2 cut(s) 573, 1599
MflI RGATCY 5 cut(s) 832, 915, 969, 1837, 1865
MhlI GDGCHC 2 cut(s) 560, 1225
MlsI TGGCCA 2 cut(s) 1592, 1663
MluNI TGGCCA 2 cut(s) 1592, 1663
MlyI GAGTC 3 cut(s) 1497, 1822, 1931
MmeI TCCRAC 1 cut(s) 2022
Mox20I TGGCCA 2 cut(s) 1592, 1663
Mph1103I ATGCAT 2 cut(s) 1572, 3419
MroXI GAANNNNTTC 2 cut(s) 33, 102
MscI TGGCCA 2 cut(s) 1592, 1663
MslI CAYNNNNRTG 5 cut(s) 686, 1940, 2508, 2550, 3204
Msp20I TGGCCA 2 cut(s) 1592, 1663
MspA1I CMGCKG 3 cut(s) 368, 3145, 3442
MspI CCGG 1 cut(s) 2417
MspR9I CCNGG 3 cut(s) 331, 2259, 3426
MunI CAATTG 2 cut(s) 573, 1599
Mva1269I GAATGC 1 cut(s) 1065
MvaI CCWGG 3 cut(s) 331, 2259, 3426
MvnI CGCG 2 cut(s) 2587, 3316
MwoI GCNNNNNNNGC 5 cut(s) 620, 1208, 2487, 2933, 3391
NcoI CCATGG 4 cut(s) 281, 636, 1047, 2509
NdeI CATATG 2 cut(s) 2912, 3288
NdeII GATC 9 cut(s) 832, 915, 969, 1837, 1865, 2287, 3096, 3340, 3436
NheI GCTAGC 1 cut(s) 1289
NlaIV GGNNCC 4 cut(s) 198, 363, 971, 3260
NmeAIII GCCGAG 1 cut(s) 1667
NmuCI GTSAC 5 cut(s) 673, 1504, 2437, 2726, 3212
NsiI ATGCAT 2 cut(s) 1572, 3419
NspI RCATGY 2 cut(s) 2936, 3421
NspV TTCGAA 1 cut(s) 2953
PaeR7I CTCGAG 1 cut(s) 7
PagI TCATGA 1 cut(s) 2797
PciSI GCTCTTC 1 cut(s) 868
PctI GAATGC 1 cut(s) 1065
PdmI GAANNNNTTC 2 cut(s) 33, 102
PfeI GAWTC 4 cut(s) 29, 233, 1094, 1969
PflFI GACNNNGTC 2 cut(s) 2721, 2732
PkrI GCNGC 9 cut(s) 14, 1261, 1385, 1725, 1847, 2535, 3387, 3390, 3393
PleI GAGTC 3 cut(s) 1496, 1821, 1930
PpsI GAGTC 3 cut(s) 1496, 1821, 1930
PpuMI RGGWCCY 1 cut(s) 2921
PshBI ATTAAT 2 cut(s) 159, 1700
PsiI TTATAA 1 cut(s) 923
Psp5II RGGWCCY 1 cut(s) 2921
Psp6I CCWGG 3 cut(s) 329, 2257, 3424
PspFI CCCAGC 1 cut(s) 838
PspGI CCWGG 3 cut(s) 329, 2257, 3424
PspN4I GGNNCC 4 cut(s) 198, 363, 971, 3260
PspPI GGNCC 5 cut(s) 798, 841, 2044, 2255, 2921
PspPPI RGGWCCY 1 cut(s) 2921
PspXI VCTCGAGB 1 cut(s) 7
PstI CTGCAG 1 cut(s) 3396
PsuI RGATCY 5 cut(s) 832, 915, 969, 1837, 1865
PsyI GACNNNGTC 2 cut(s) 2721, 2732
PvuII CAGCTG 2 cut(s) 368, 3145
RsaI GTAC 8 cut(s) 375, 567, 692, 741, 1907, 2120, 2544, 2888
RsaNI GTAC 8 cut(s) 374, 566, 691, 740, 1906, 2119, 2543, 2887
RseI CAYNNNNRTG 5 cut(s) 686, 1940, 2508, 2550, 3204
SapI GCTCTTC 1 cut(s) 868
SatI GCNGC 9 cut(s) 13, 1260, 1384, 1724, 1846, 2534, 3386, 3389, 3392
Sau3AI GATC 9 cut(s) 832, 915, 969, 1837, 1865, 2287, 3096, 3340, 3436
Sau96I GGNCC 5 cut(s) 798, 841, 2044, 2255, 2921
SchI GAGTC 3 cut(s) 1497, 1822, 1931
ScrFI CCNGG 3 cut(s) 331, 2259, 3426
SduI GDGCHC 2 cut(s) 560, 1225
SfaNI GCATC 9 cut(s) 454, 1348, 1471, 1547, 1557, 1660, 2233, 2638, 3372
SfcI CTRYAG 2 cut(s) 1766, 3392
Sfr274I CTCGAG 1 cut(s) 7
SfuI TTCGAA 1 cut(s) 2953
SinI GGWCC 3 cut(s) 2044, 2255, 2921
SlaI CTCGAG 1 cut(s) 7
SmiMI CAYNNNNRTG 5 cut(s) 686, 1940, 2508, 2550, 3204
SmlI CTYRAG 6 cut(s) 7, 59, 805, 1964, 2082, 2633
SmoI CTYRAG 6 cut(s) 7, 59, 805, 1964, 2082, 2633
SsiI CCGC 5 cut(s) 686, 1846, 2533, 2587, 3442
SspI AATATT 2 cut(s) 1855, 2056
SspMI CTAG 1 cut(s) 1290
StyD4I CCNGG 3 cut(s) 329, 2257, 3424
StyI CCWWGG 6 cut(s) 281, 636, 817, 1047, 1818, 2509
TaaI ACNGT 9 cut(s) 1352, 1544, 2074, 2118, 2278, 2721, 2965, 3364, 3453
TaiI ACGT 2 cut(s) 1288, 2436
TatI WGTACW 5 cut(s) 739, 1905, 2118, 2542, 2886
TauI GCSGC 2 cut(s) 1848, 2536
TfiI GAWTC 4 cut(s) 29, 233, 1094, 1969
TscAI CASTG 6 cut(s) 461, 604, 682, 1209, 2726, 3401
TseFI GTSAC 5 cut(s) 673, 1504, 2437, 2726, 3212
TseI GCWGC 7 cut(s) 12, 1259, 1383, 1723, 3385, 3388, 3391
Tsp45I GTSAC 5 cut(s) 673, 1504, 2437, 2726, 3212
TspGWI ACGGA 2 cut(s) 708, 3474
TspRI CASTG 6 cut(s) 461, 604, 682, 1209, 2726, 3401
Tth111I GACNNNGTC 2 cut(s) 2721, 2732
VneI GTGCAC 1 cut(s) 556
VpaK11BI GGWCC 3 cut(s) 2044, 2255, 2921
VspI ATTAAT 2 cut(s) 159, 1700
XapI RAATTY 9 cut(s) 336, 1148, 1498, 1755, 2000, 2132, 2614, 2755, 3182
XceI RCATGY 2 cut(s) 2936, 3421
XhoI CTCGAG 1 cut(s) 7
XmnI GAANNNNTTC 2 cut(s) 33, 102
XspI CTAG 1 cut(s) 1290
Zsp2I ATGCAT 2 cut(s) 1572, 3419
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.