Rmu_sc0005194.1_g000003

Disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005194.1
OG0000085
Physical Location & Seq
Forward (+)
9373 .. 13906
4534 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005194.1_g000003.1.cds

Sequence Viewer

Length: 3828 bp
atggcctccagctcccaaatagcctgtgcatcccctccttcatcagatccatgttggaagtatgatgtgtttttgagtttcaggggtgtagacactcgcaaggggattacagtcgacatacacgatcgacttaataggagtggaatcaaaacattcatggatgagcaggaccttcaagtaggtgatgttatttctcccactttcatagcagcaatcaaagaatcaaggtttgcaattgttgttctctcgcaaaattatgcttcttctgcttggtgtttggaggaacttagagagatttgtctatccatggaagacaacagaattttgccacttttttatcatgttgatcctactaatgttcgatatcagaaagagagtttcgaaaaagatttctctaagcatgaaacgtccgggcgacatgaatcagagaaagtgaagcaatggaaagctgctttaaacaaagtggcctgtttttctgggtggaatacaaatgattacaagactcacaaagaacttgttgatgtgattgcggaatttctccgtagtaaagtagtacctgatgcaattgagtccacaggagattttgaagcatttgaagcaacaagacaagccatgaatgagataatgaaggcactaaaagatgacgaggtcactgccgtcggtgtctacggcatgggaggcgttggaaagacaaccatggtgaaacatgtcggtgcacatgcccgaaaaagtgggatttttgattgtgtgattatgggtgtcgtatcccaaagccctgactacagaaaaattcaaggcacattagcagacctattaggcgtcaaattggagggagagacagaaattggaagagcagctggattgagtaaggagatgaagagaagaaataagatccttataatcctggacgacatttgggggagaacagagttgtcaaagatagggattcccagctacgaggagcttcacaagtgcaaatccaaagtcctactcaccacaaggatatggaatgtctgtcatgtcatgagatgccaaagaaagatcattctcagtaccctatcagaaaaagattcttggactttgtttgtgcgaaatgcagaaagtcgttttgaatcgaccacttttaagcttgtagcgaagaaggtagctggagaatgtaggggtctacccattgcattgatagcagttgcaagggcacttggagataaagaaccggaggaatggaaaagagcagctcagcgactagagaagtcgcaaattgccaaccctgatgataagggagatgcatttgaatgtataaaattgagctttgattacttgaaagatgaggaccacaagtcattcttcttgctctgttgcctattcccagaagaccgtgaaatcaatatagaagacttgttcaggtatgcaattggaaaaggattatttcaagatgctgaaacaatggacgaagccagaggaacagcagattcagtggtcaagtacctgaaagattctagcttgcttttggagagtgaatacattggatttgtaaagatgcatgatgttgtccgagatacagccattcaaattgcgcaatttgaacatgggtttttggtgagagctggctgtggtttaaaggactggccacgtcaattacatgaaggctattctgcagtctcactaatgcacaatcatatttccaagctacccgaaaagtttgtatgtccagaactccagattttgttactaaacaataatacgtttatagatgcgtggatacctatggatatcccagaaaccttttttcaaactcctaatgaattaagggtcttagatcttagccagactattacttcattgctaccccaatcgctgtgtctcctgaccaacctccgtactttgtatttagacggttgttcctgttctgacacttccatgatcggaaaacttaagaagcttgagattcttagtatgagacacggttatttgaagaagttgtcgagagaaataggagatttgaccaatctaaagatattggatttcaccggtacaagttttcggacaattctatccgaagggatcatatcaaagttgcataatttagaagaactctacatgcgacgattttcgaactgggggcgtaaagttgagggagacagagaagaaacaaatgttggttttgacgaggtaactagcttgtcaaatttaagagttttagaggttcgtttctccgatgcagcatgtacacctaaaaatgttgagctcaatccgaattgggttaaatttaaagtatatatgggcagaggcaagaagatggaattcaataatcgatatggtcataaatcaatattcttgaggtttggcaccccgagtagcttaccggactggttttgcaatggggtgatgaacataacagagaggctacggtgggaagggtgccgaaggttaattgacatatttgtggagtctgagcatgggagattacatggactgaagcttctctatatatttggttccagggggtacaaacttatgaacccaataacatgggttccaaaaaaacctgtgttcgagaacttggaagagttgcatctggaaaacgtgaattgccaggagttatgtgttggtgaattaccaccggggtctctattcaatttgaagttattgaaggttcactcttgtaacaactgggggaatgtatttttaccatcaacactgttgcagagactaccaaatctggaagaactacattgtctgtacttggagattgaatatgtgtttgggtatgaagcgttatttgagccagaacaatcacatttgagaaagatagacttgtattttctaggtacaataacaagcatatgtgatggacctgctctacctgcaatgttccaaaatcttcagagtttgtccattagttggtgcggcttgctgggaagtctcttcacctctgatgttgctcaatatctttttcaattggaatacattggtttactaggttgcccctttttgcaaagaatagttgaagcaagcaacaagaagatcattcttccaaaattgaaggaattagttttgaaagaactaccaatgttatactatgaaagtgcttcttttgatattgagtgtccttcactggaaaacctatatgtgacggactgccccatgtttttagccacttctcttgacttccacagcaggaaacaagtccaattcaagaggaggttccggtggttggctgggttgcccggaggtgcaggtgcttacgaggagtgtgatcctgggtttggagaaagggcggcatggggatttgatagggatgaggcgggttgtccaattggacttcccggttatcttctgggtccgattgggtggtcggatgtgaagaaggaggcgtctgatggttgctctggtaatgggtttacagtttggccatcagaaagctgctttcatggtgcgcaggcggaggtgtgggaggctggggctggaaggaattccagatccgatctggatcgggtctgccttctgggaggcttacctgtgtacgctggggtgactgatcggtggtggcaacaaggggcgacggcgacggcgatggcggtgctgctgcgtggttggtggtgcatgtctgctattgttctgcatcacctggaggatgggcttagggtttttgggctgctgctatctggaccattttcttgggctagggctatggtagcggtggcgaaaaagtctggcatagacaatcatccttggccttctagtgggtccttcctgtctgcgatcgggtcggaggaaatggcgttttggagcagtggtggatggatggtgttgacaatagggaggtga

Protein Analysis

1275

Amino Acids

143.99

Weight (kDa)

6.15

Isoelectric Point (pI)

42.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000085)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g05721 FvH4_2g05721 FvH4_3g35820 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35920 FvH4_3g38670 FvH4_3g43650 FvH4_3g43650 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44070 FvH4_5g01271 FvH4_5g02970 FvH4_5g02970 FvH4_5g02970 FvH4_5g27640 FvH4_5g27640 FvH4_5g27640 FvH4_6g05393 FvH4_6g52372 FvH4_7g06680 FvH4_7g12671 FvH4_7g13640 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31510
malus_domestica MD09G1227900.v1.1 MD11G1019800.v1.1 MD11G1020500.v1.1
prunus_persica Prupe.1G542800_v2.0.a1 Prupe.1G542800_v2.0.a1
pyrus_communis pycom11g01460 pycom11g01490 pycom11g01530 pycom11g01570 pycom15g35490
rosa_chinensis RchiOBHm_Chr1g0353711 RchiOBHm_Chr3g0473211 RchiOBHm_Chr3g0473291 RchiOBHm_Chr3g0473341 RchiOBHm_Chr3g0473381 RchiOBHm_Chr3g0473391 RchiOBHm_Chr3g0473441 RchiOBHm_Chr3g0473481 RchiOBHm_Chr3g0473531 RchiOBHm_Chr3g0473561 RchiOBHm_Chr3g0473571 RchiOBHm_Chr3g0483491 RchiOBHm_Chr3g0488681 RchiOBHm_Chr5g0059311 RchiOBHm_Chr5g0061291 RchiOBHm_Chr5g0061301 RchiOBHm_Chr5g0061331 RchiOBHm_Chr5g0064081 RchiOBHm_Chr5g0064111 RchiOBHm_Chr5g0064151 RchiOBHm_Chr5g0064171 RchiOBHm_Chr5g0069721 RchiOBHm_Chr5g0069731 RchiOBHm_Chr5g0069741 RchiOBHm_Chr5g0078251 RchiOBHm_Chr5g0078301 RchiOBHm_Chr5g0079511 RchiOBHm_Chr5g0079791 RchiOBHm_Chr5g0079811 RchiOBHm_Chr5g0079861 RchiOBHm_Chr5g0079881 RchiOBHm_Chr5g0080241 RchiOBHm_Chr5g0080281 RchiOBHm_Chr5g0080371 RchiOBHm_Chr5g0080671 RchiOBHm_Chr6g0256601 RchiOBHm_Chr6g0274791 RchiOBHm_Chr7g0221971 RchiOBHm_Chr7g0221981
rosa_laevigata RLG00000002106 RLG00000013523 RLG00000014806 RLG00000024010 RLG00000035451 RLG00000035455 RLG00000035464 RLG00000035705 RLG00000036094 RLG00000036817 RLG00000036825 RLG00000036826 RLG00000036848
rosa_multiflora Rmu_co8200400.1_g000001 Rmu_co8473147.1_g000001 Rmu_sc0000394.1_g000030 Rmu_sc0000555.1_g000030 Rmu_sc0000595.1_g000002 Rmu_sc0000595.1_g000006 Rmu_sc0000595.1_g000029 Rmu_sc0000689.1_g000018 Rmu_sc0000689.1_g000032 Rmu_sc0000689.1_g000041 Rmu_sc0000738.1_g000025 Rmu_sc0000826.1_g000016 Rmu_sc0000908.1_g000016 Rmu_sc0000908.1_g000019 Rmu_sc0000908.1_g000021 Rmu_sc0001208.1_g000087 Rmu_sc0001639.1_g000004 Rmu_sc0002075.1_g000004 Rmu_sc0002075.1_g000009 Rmu_sc0002187.1_g000042 Rmu_sc0002187.1_g000043 Rmu_sc0002187.1_g000060 Rmu_sc0002513.1_g000025 Rmu_sc0002983.1_g000008 Rmu_sc0003012.1_g000004 Rmu_sc0003069.1_g000019 Rmu_sc0003069.1_g000020 Rmu_sc0003069.1_g000047 Rmu_sc0003069.1_g000051 Rmu_sc0003069.1_g000053 Rmu_sc0003131.1_g000014 Rmu_sc0003514.1_g000003 Rmu_sc0003547.1_g000006 Rmu_sc0003547.1_g000008 Rmu_sc0004325.1_g000021 Rmu_sc0004482.1_g000004 Rmu_sc0004482.1_g000022 Rmu_sc0005006.1_g000004 Rmu_sc0005006.1_g000009 Rmu_sc0005006.1_g000010 Rmu_sc0005194.1_g000002 Rmu_sc0005194.1_g000003 Rmu_sc0005834.1_g000002 Rmu_sc0005947.1_g000023 Rmu_sc0006792.1_g000026 Rmu_sc0007612.1_g000001 Rmu_sc0007793.1_g000024 Rmu_sc0007793.1_g000025 Rmu_sc0008050.1_g000015 Rmu_sc0008336.1_g000003 Rmu_sc0010248.1_g000002 Rmu_sc0011921.1_g000001 Rmu_sc0011921.1_g000006 Rmu_sc0012138.1_g000001 Rmu_sc0016164.1_g000015 Rmu_sc0018807.1_g000005 Rmu_sc0030948.1_g000001 Rmu_sc0042587.1_g000001 Rmu_ssc0000170.1_g000020 Rmu_ssc0000170.1_g000026 Rmu_ssc0000170.1_g000029
rosa_roxburghii Rroxscaffold_1G00003040 Rroxscaffold_1G00003080 Rroxscaffold_1G00003430 Rroxscaffold_1G00003490 Rroxscaffold_1G00011370 Rroxscaffold_1G00016780 Rroxscaffold_1G00019390 Rroxscaffold_1G00019400 Rroxscaffold_1G00019420 Rroxscaffold_1G00021170 Rroxscaffold_3G00237530 Rroxscaffold_3G00246470 Rroxscaffold_4G00301730 Rroxscaffold_4G00309300 Rroxscaffold_6G00398250 Rroxscaffold_6G00398270 Rroxscaffold_6G00398280 Rroxscaffold_6G00408070 Rroxscaffold_7G00193940 Rroxscaffold_7G00209570
rosa_rugosa Rorug01G0237100 Rorug03G0098200 Rorug03G0132200 Rorug03G0132400 Rorug03G0132500 Rorug03G0132500 Rorug03G0132500 Rorug03G0132700 Rorug03G0132800 Rorug03G0205900 Rorug03G0206100 Rorug03G0206100 Rorug03G0206300 Rorug03G0206400 Rorug03G0206400 Rorug03G0240700 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug05G0322400 Rorug05G0339300 Rorug05G0339500 Rorug05G0362200 Rorug05G0362300 Rorug05G0362400 Rorug05G0362600 Rorug05G0362700 Rorug05G0362800 Rorug05G0363100 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0459900 Rorug05G0464600 Rorug05G0465000 Rorug05G0465100 Rorug05G0465200 Rorug05G0466000 Rorug05G0466300 Rorug05G0466400 Rorug05G0466500 Rorug05G0466600 Rorug05G0466700 Rorug05G0466700 Rorug05G0466700 Rorug05G0466800 Rorug05G0466900 Rorug05G0468100 Rorug05G0562200 Rorug05G0562300 Rorug06G0084400 Rorug06G0084500 Rorug06G0084500 Rorug06G0084600 Rorug07G0136400 Rorug07G0204500 Rorug07G0204600 Rorug07G0221500
rosa_samantha Rh5CG438200 Rh5CG569900 Rh6AG080700 Rh7CG362800 Rh7DG275900 Rh7DG343100
rosa_wichuraiana Rw0G004790 Rw0G008160 Rw0G008170 Rw0G008200 Rw0G008210 Rw0G012980 Rw0G013670 Rw0G019920 Rw0G020380 Rw0G022790 Rw0G022800 Rw0G023350 Rw1G005530 Rw1G021740 Rw3G013910 Rw3G015980 Rw3G023020 Rw3G023030 Rw3G025580 Rw5G027180 Rw5G037760 Rw5G037770 Rw5G037780 Rw5G037790 Rw5G037810 Rw5G037820 Rw5G039500 Rw5G039520 Rw5G039530 Rw5G039540 Rw5G039550 Rw5G039570 Rw5G039580 Rw5G039610 Rw5G039630 Rw5G039660 Rw5G042590 Rw5G047840 Rw5G048170 Rw5G048400 Rw5G048470 Rw5G048540 Rw6G007030 Rw6G007080 Rw6G007460 Rw6G017430 Rw7G023150 Rw7G023260 Rw7G029260 Rw7G029270 Rw7G030950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 899
AarI CACCTGC 1 cut(s) 3227
Acc16I TGCGCA 2 cut(s) 1575, 3438
Acc36I ACCTGC 3 cut(s) 2863, 2872, 3227
AccB1I GGYRCC 2 cut(s) 2345, 2418
AccB7I CCANNNNNTGG 1 cut(s) 2901
AccI GTMKAC 4 cut(s) 90, 114, 666, 1165
AciI CCGC 7 cut(s) 530, 2907, 3278, 3305, 3443, 3578, 3698
AclWI GGATC 7 cut(s) 41, 341, 886, 2069, 3251, 3474, 3498
AcoI YGGCCR 2 cut(s) 1625, 3410
AcsI RAATTY 7 cut(s) 321, 533, 789, 2185, 2264, 2300, 3472
AcuI CTGAAG 2 cut(s) 2495, 2867
AcyI GRCGYC 2 cut(s) 819, 3374
AfiI CCNNNNNNNGG 4 cut(s) 2901, 3214, 3266, 3743
AflII CTTAAG 1 cut(s) 1931
AflIII ACRYGT 1 cut(s) 706
AgeI ACCGGT 1 cut(s) 2027
AhdI GACNNNNNGTC 1 cut(s) 1336
AjiI CACGTC 1 cut(s) 1631
AjnI CCWGG 5 cut(s) 903, 2498, 2592, 3259, 3627
AjuI GAANNNNNNNTTGG 4 cut(s) 2139, 2171, 2745, 2777
Alw21I GWGCWC 2 cut(s) 718, 2247
Alw26I GTCTC 8 cut(s) 830, 1663, 1865, 1951, 2130, 2631, 2701, 2927
Alw44I GTGCAC 1 cut(s) 714
AlwI GGATC 7 cut(s) 41, 341, 886, 2069, 3251, 3474, 3498
Ama87I CYCGRG 1 cut(s) 2350
AoxI GGCC 5 cut(s) 3, 465, 1625, 3410, 3734
ApaLI GTGCAC 1 cut(s) 714
ApoI RAATTY 7 cut(s) 321, 533, 789, 2185, 2264, 2300, 3472
ArsI GACNNNNNNTTYG 2 cut(s) 969, 1001
AsiGI ACCGGT 1 cut(s) 2027
Asp700I GAANNNNTTC 1 cut(s) 3472
AspLEI GCGC 2 cut(s) 1576, 3439
AspS9I GGNCC 6 cut(s) 169, 1330, 2852, 3341, 3668, 3747
AsuC2I CCSGG 4 cut(s) 412, 2622, 3228, 3327
AsuII TTCGAA 2 cut(s) 381, 2111
AvaI CYCGRG 1 cut(s) 2350
AvaII GGWCC 6 cut(s) 169, 1330, 2852, 3341, 3668, 3747
BaeGI GKGCMC 2 cut(s) 718, 1198
BalI TGGCCA 2 cut(s) 1627, 3412
BanI GGYRCC 2 cut(s) 2345, 2418
BanII GRGCYC 1 cut(s) 2247
BbsI GAAGAC 3 cut(s) 318, 1377, 1398
Bbv12I GWGCWC 2 cut(s) 718, 2247
BccI CCATC 9 cut(s) 2290, 2698, 2843, 3374, 3421, 3568, 3629, 3795, 3799
BceAI ACGGC 4 cut(s) 641, 685, 3579, 3585
BcgI CGANNNNNNTGC 4 cut(s) 635, 669, 3562, 3596
BciT130I CCWGG 5 cut(s) 905, 2500, 2594, 3261, 3629
BciVI GTATCC 2 cut(s) 775, 1752
BcnI CCSGG 4 cut(s) 412, 2622, 3228, 3327
BcoDI GTCTC 8 cut(s) 830, 1663, 1865, 1951, 2130, 2631, 2701, 2927
BfaI CTAG 7 cut(s) 1244, 1497, 2175, 2825, 2978, 3684, 3741
BfmI CTRYAG 2 cut(s) 781, 1653
BfrI CTTAAG 1 cut(s) 1931
BfuAI ACCTGC 3 cut(s) 2863, 2872, 3227
BfuI GTATCC 2 cut(s) 775, 1752
BglII AGATCT 1 cut(s) 1816
BlpI GCTNAGC 1 cut(s) 1236
Bme1390I CCNGG 9 cut(s) 412, 905, 2500, 2594, 2622, 3228, 3261, 3327, 3629
Bme18I GGWCC 6 cut(s) 169, 1330, 2852, 3341, 3668, 3747
BmeRI GACNNNNNGTC 1 cut(s) 1336
BmeT110I CYCGRG 1 cut(s) 2350
BmgBI CACGTC 1 cut(s) 1631
BmgT120I GGNCC 6 cut(s) 169, 1330, 2852, 3341, 3668, 3747
BmiI GGNNCC 7 cut(s) 2347, 2420, 2497, 2535, 3206, 3342, 3748
BmrFI CCNGG 9 cut(s) 412, 905, 2500, 2594, 2622, 3228, 3261, 3327, 3629
BmrI ACTGGG 2 cut(s) 2125, 2680
BmuI ACTGGG 2 cut(s) 2125, 2680
BpiI GAAGAC 3 cut(s) 318, 1377, 1398
BpmI CTGGAG 3 cut(s) 1170, 1700, 3650
Bpu10I CCTNAGC 1 cut(s) 3641
Bpu1102I GCTNAGC 1 cut(s) 1236
Bpu14I TTCGAA 2 cut(s) 381, 2111
BpuEI CTTGAG 2 cut(s) 1961, 2356
BpuMI CCSGG 4 cut(s) 412, 2622, 3228, 3327
Bsa29I ATCGAT 1 cut(s) 2311
BsaBI GATNNNNATC 1 cut(s) 3489
BsaHI GRCGYC 2 cut(s) 819, 3374
BsaI GGTCTC 1 cut(s) 2631
BsaJI CCNNGG 6 cut(s) 306, 696, 2499, 2621, 3260, 3731
BsaWI WCCGGW 4 cut(s) 1213, 2027, 2362, 3207
BsaXI ACNNNNNCTCC 2 cut(s) 3781, 3811
Bsc4I CCNNNNNNNGG 4 cut(s) 2901, 3214, 3266, 3743
Bse118I RCCGGY 1 cut(s) 2027
Bse1I ACTGG 5 cut(s) 1628, 2120, 2372, 2675, 3120
Bse3DI GCAATG 5 cut(s) 446, 1170, 1838, 2383, 2874
Bse8I GATNNNNATC 1 cut(s) 3489
BseBI CCWGG 5 cut(s) 905, 2500, 2594, 3261, 3629
BseCI ATCGAT 1 cut(s) 2311
BseDI CCNNGG 6 cut(s) 306, 696, 2499, 2621, 3260, 3731
BseGI GGATG 8 cut(s) 29, 166, 3304, 3364, 3640, 3727, 3806, 3810
BseJI GATNNNNATC 1 cut(s) 3489
BseLI CCNNNNNNNGG 4 cut(s) 2901, 3214, 3266, 3743
BseMI GCAATG 5 cut(s) 446, 1170, 1838, 2383, 2874
BseMII CTCAG 3 cut(s) 1063, 1250, 2442
BseNI ACTGG 5 cut(s) 1628, 2120, 2372, 2675, 3120
BseRI GAGGAG 3 cut(s) 974, 3214, 3263
BseSI GKGCMC 2 cut(s) 718, 1198
BseYI CCCAGC 5 cut(s) 950, 2914, 3218, 3458, 3527
BsgI GTGCAG 1 cut(s) 3255
Bsh1285I CGRYCG 2 cut(s) 127, 3765
BshFI GGCC 5 cut(s) 5, 467, 1627, 3412, 3736
BshNI GGYRCC 2 cut(s) 2345, 2418
BshTI ACCGGT 1 cut(s) 2027
BshVI ATCGAT 1 cut(s) 2311
BsiEI CGRYCG 2 cut(s) 127, 3765
BsiHKAI GWGCWC 2 cut(s) 718, 2247
BsiHKCI CYCGRG 1 cut(s) 2350
BsiSI CCGG 8 cut(s) 411, 1214, 2028, 2363, 2621, 3208, 3228, 3327
BslI CCNNNNNNNGG 4 cut(s) 2901, 3214, 3266, 3743
BsmAI GTCTC 8 cut(s) 830, 1663, 1865, 1951, 2130, 2631, 2701, 2927
BsnI GGCC 5 cut(s) 5, 467, 1627, 3412, 3736
Bso31I GGTCTC 1 cut(s) 2631
BsoBI CYCGRG 1 cut(s) 2350
Bsp119I TTCGAA 2 cut(s) 381, 2111
Bsp1286I GDGCHC 3 cut(s) 718, 1198, 2247
Bsp1407I TGTACA 1 cut(s) 2225
Bsp1720I GCTNAGC 1 cut(s) 1236
Bsp19I CCATGG 2 cut(s) 306, 696
BspACI CCGC 7 cut(s) 530, 2907, 3278, 3305, 3443, 3578, 3698
BspANI GGCC 5 cut(s) 5, 467, 1627, 3412, 3736
BspCNI CTCAG 3 cut(s) 1062, 1249, 2443
BspDI ATCGAT 1 cut(s) 2311
BspHI TCATGA 1 cut(s) 1023
BspLI GGNNCC 7 cut(s) 2347, 2420, 2497, 2535, 3206, 3342, 3748
BspMAI CTGCAG 1 cut(s) 1657
BspMI ACCTGC 3 cut(s) 2863, 2872, 3227
BspPI GGATC 7 cut(s) 41, 341, 886, 2069, 3251, 3474, 3498
BspQI GCTCTTC 1 cut(s) 844
BspT104I TTCGAA 2 cut(s) 381, 2111
BspT107I GGYRCC 2 cut(s) 2345, 2418
BspTI CTTAAG 1 cut(s) 1931
BspTNI GGTCTC 1 cut(s) 2631
BsrDI GCAATG 5 cut(s) 446, 1170, 1838, 2383, 2874
BsrFI RCCGGY 1 cut(s) 2027
BsrGI TGTACA 1 cut(s) 2225
BsrI ACTGG 5 cut(s) 1628, 2120, 2372, 2675, 3120
BssAI RCCGGY 1 cut(s) 2027
BssECI CCNNGG 6 cut(s) 306, 696, 2499, 2621, 3260, 3731
BssNI GRCGYC 2 cut(s) 819, 3374
BssT1I CCWWGG 3 cut(s) 306, 696, 3731
Bst2UI CCWGG 5 cut(s) 905, 2500, 2594, 3261, 3629
Bst4CI ACNGT 7 cut(s) 112, 1376, 1895, 1964, 2409, 2700, 3406
Bst6I CTCTTC 4 cut(s) 844, 872, 2559, 2930
BstACI GRCGYC 2 cut(s) 819, 3374
BstAFI CTTAAG 1 cut(s) 1931
BstAUI TGTACA 1 cut(s) 2225
BstBI TTCGAA 2 cut(s) 381, 2111
BstC8I GCNNGC 5 cut(s) 1502, 1606, 2912, 3013, 3441
BstDEI CTNAG 9 cut(s) 287, 396, 1049, 1236, 1813, 1820, 1949, 2451, 3641
BstDSI CCRYGG 2 cut(s) 306, 696
BstF5I GGATG 8 cut(s) 29, 166, 3304, 3364, 3640, 3727, 3806, 3810
BstHHI GCGC 2 cut(s) 1576, 3439
BstMAI GTCTC 8 cut(s) 830, 1663, 1865, 1951, 2130, 2631, 2701, 2927
BstMCI CGRYCG 2 cut(s) 127, 3765
BstMWI GCNNNNNNNGC 6 cut(s) 266, 596, 678, 1181, 2864, 3695
BstNI CCWGG 5 cut(s) 905, 2500, 2594, 3261, 3629
BstNSI RCATGY 5 cut(s) 710, 722, 2101, 2226, 3607
BstSCI CCNGG 9 cut(s) 410, 903, 2498, 2592, 2620, 3226, 3259, 3325, 3627
BstSFI CTRYAG 2 cut(s) 781, 1653
BstSLI GKGCMC 2 cut(s) 718, 1198
BstV2I GAAGAC 3 cut(s) 318, 1377, 1398
BstX2I RGATCY 4 cut(s) 46, 891, 1816, 3479
BstXI CCANNNNNNTGG 2 cut(s) 2529, 3678
BstYI RGATCY 4 cut(s) 46, 891, 1816, 3479
Bsu15I ATCGAT 1 cut(s) 2311
BsuI GTATCC 2 cut(s) 775, 1752
BsuRI GGCC 5 cut(s) 5, 467, 1627, 3412, 3736
BsuTUI ATCGAT 1 cut(s) 2311
BtgI CCRYGG 2 cut(s) 306, 696
BtgZI GCGATG 1 cut(s) 3587
BtrI CACGTC 1 cut(s) 1631
BtsCI GGATG 8 cut(s) 29, 166, 3304, 3364, 3640, 3727, 3806, 3810
BtsI GCAGTG 2 cut(s) 651, 3799
BtsIMutI CAGTG 5 cut(s) 651, 1479, 2696, 3113, 3799
BveI ACCTGC 3 cut(s) 2863, 2872, 3227
Cac8I GCNNGC 5 cut(s) 1502, 1606, 2912, 3013, 3441
CciI TCATGA 1 cut(s) 1023
CfoI GCGC 2 cut(s) 1576, 3439
Cfr10I RCCGGY 1 cut(s) 2027
Cfr13I GGNCC 6 cut(s) 169, 1330, 2852, 3341, 3668, 3747
ClaI ATCGAT 1 cut(s) 2311
CseI GACGC 2 cut(s) 808, 3363
CspAI ACCGGT 1 cut(s) 2027
CspCI CAANNNNNGTGG 2 cut(s) 3145, 3180
DdeI CTNAG 9 cut(s) 287, 396, 1049, 1236, 1813, 1820, 1949, 2451, 3641
DraI TTTAAA 3 cut(s) 456, 1617, 2269
DriI GACNNNNNGTC 1 cut(s) 1336
EaeI YGGCCR 2 cut(s) 1625, 3410
Eam1104I CTCTTC 4 cut(s) 844, 872, 2559, 2930
Eam1105I GACNNNNNGTC 1 cut(s) 1336
EarI CTCTTC 4 cut(s) 844, 872, 2559, 2930
EciI GGCGGA 1 cut(s) 3458
Ecl136II GAGCTC 1 cut(s) 2245
Eco130I CCWWGG 3 cut(s) 306, 696, 3731
Eco24I GRGCYC 1 cut(s) 2247
Eco31I GGTCTC 1 cut(s) 2631
Eco32I GATATC 2 cut(s) 365, 1771
Eco47I GGWCC 6 cut(s) 169, 1330, 2852, 3341, 3668, 3747
Eco53kI GAGCTC 1 cut(s) 2245
Eco57I CTGAAG 2 cut(s) 2495, 2867
Eco88I CYCGRG 1 cut(s) 2350
EcoICRI GAGCTC 1 cut(s) 2245
EcoO109I RGGNCCY 2 cut(s) 169, 3747
EcoRI GAATTC 2 cut(s) 2300, 3472
EcoRII CCWGG 5 cut(s) 903, 2498, 2592, 3259, 3627
EcoRV GATATC 2 cut(s) 365, 1771
EcoT14I CCWWGG 3 cut(s) 306, 696, 3731
EcoT22I ATGCAT 2 cut(s) 1288, 1542
EcoT38I GRGCYC 1 cut(s) 2247
ErhI CCWWGG 3 cut(s) 306, 696, 3731
FalI AAGNNNNNCTT 6 cut(s) 1328, 1360, 2798, 2830, 3076, 3108
FauI CCCGC 1 cut(s) 3298
FauNDI CATATG 1 cut(s) 2843
FblI GTMKAC 4 cut(s) 90, 114, 666, 1165
FokI GGATG 8 cut(s) 16, 173, 3311, 3371, 3647, 3714, 3813, 3817
FriOI GRGCYC 1 cut(s) 2247
FspBI CTAG 7 cut(s) 1244, 1497, 2175, 2825, 2978, 3684, 3741
FspI TGCGCA 2 cut(s) 1575, 3438
GlaI GCGC 2 cut(s) 1575, 3438
GsaI CCCAGC 5 cut(s) 954, 2918, 3222, 3462, 3531
GsuI CTGGAG 3 cut(s) 1170, 1700, 3650
HaeIII GGCC 5 cut(s) 5, 467, 1627, 3412, 3736
HapII CCGG 8 cut(s) 411, 1214, 2028, 2363, 2621, 3208, 3228, 3327
HgaI GACGC 2 cut(s) 808, 3363
HhaI GCGC 2 cut(s) 1576, 3439
Hin1I GRCGYC 2 cut(s) 819, 3374
Hin6I GCGC 2 cut(s) 1574, 3437
HinP1I GCGC 2 cut(s) 1574, 3437
HincII GTYRAC 2 cut(s) 115, 3813
HindII GTYRAC 2 cut(s) 115, 3813
HindIII AAGCTT 3 cut(s) 1127, 1937, 2477
HpaII CCGG 8 cut(s) 411, 1214, 2028, 2363, 2621, 3208, 3228, 3327
Hpy99I CGWCG 4 cut(s) 662, 2106, 3565, 3571
HpyCH4III ACNGT 7 cut(s) 112, 1376, 1895, 1964, 2409, 2700, 3406
HpyCH4IV ACGT 4 cut(s) 407, 1630, 1742, 2583
HpyF10VI GCNNNNNNNGC 6 cut(s) 266, 596, 678, 1181, 2864, 3695
HpyF3I CTNAG 9 cut(s) 287, 396, 1049, 1236, 1813, 1820, 1949, 2451, 3641
HpySE526I ACGT 4 cut(s) 407, 1630, 1742, 2583
Hsp92I GRCGYC 2 cut(s) 819, 3374
HspAI GCGC 2 cut(s) 1574, 3437
LguI GCTCTTC 1 cut(s) 844
LmnI GCTCC 3 cut(s) 17, 961, 3789
MaeI CTAG 7 cut(s) 1244, 1497, 2175, 2825, 2978, 3684, 3741
MaeII ACGT 4 cut(s) 407, 1630, 1742, 2583
MaeIII GTNAC 6 cut(s) 649, 1725, 2170, 2663, 3130, 3532
MfeI CAATTG 5 cut(s) 234, 564, 1410, 2957, 3315
MflI RGATCY 4 cut(s) 46, 891, 1816, 3479
MhlI GDGCHC 3 cut(s) 718, 1198, 2247
MlsI TGGCCA 2 cut(s) 1627, 3412
MluNI TGGCCA 2 cut(s) 1627, 3412
MlyI GAGTC 3 cut(s) 496, 578, 2456
MmeI TCCRAC 4 cut(s) 35, 664, 3336, 3750
Mox20I TGGCCA 2 cut(s) 1627, 3412
Mph1103I ATGCAT 2 cut(s) 1288, 1542
MroXI GAANNNNTTC 1 cut(s) 3472
MscI TGGCCA 2 cut(s) 1627, 3412
MslI CAYNNNNRTG 4 cut(s) 711, 1291, 1916, 2441
Msp20I TGGCCA 2 cut(s) 1627, 3412
MspA1I CMGCKG 1 cut(s) 857
MspCI CTTAAG 1 cut(s) 1931
MspI CCGG 8 cut(s) 411, 1214, 2028, 2363, 2621, 3208, 3228, 3327
MspR9I CCNGG 9 cut(s) 412, 905, 2500, 2594, 2622, 3228, 3261, 3327, 3629
MunI CAATTG 5 cut(s) 234, 564, 1410, 2957, 3315
MvaI CCWGG 5 cut(s) 905, 2500, 2594, 3261, 3629
MwoI GCNNNNNNNGC 6 cut(s) 266, 596, 678, 1181, 2864, 3695
NciI CCSGG 4 cut(s) 412, 2622, 3228, 3327
NcoI CCATGG 2 cut(s) 306, 696
NdeI CATATG 1 cut(s) 2843
NlaIV GGNNCC 7 cut(s) 2347, 2420, 2497, 2535, 3206, 3342, 3748
NmuCI GTSAC 3 cut(s) 649, 3130, 3532
NsbI TGCGCA 2 cut(s) 1575, 3438
NsiI ATGCAT 2 cut(s) 1288, 1542
NspI RCATGY 5 cut(s) 710, 722, 2101, 2226, 3607
NspV TTCGAA 2 cut(s) 381, 2111
PagI TCATGA 1 cut(s) 1023
PaqCI CACCTGC 1 cut(s) 3227
PciI ACATGT 1 cut(s) 706
PciSI GCTCTTC 1 cut(s) 844
PcsI WCGNNNNNNNCGW 2 cut(s) 120, 3569
PdmI GAANNNNTTC 1 cut(s) 3472
PfeI GAWTC 9 cut(s) 144, 221, 422, 946, 1070, 1112, 1469, 1493, 1945
PflFI GACNNNGTC 1 cut(s) 647
PflMI CCANNNNNTGG 1 cut(s) 2901
PfoI TCCNGGA 1 cut(s) 903
PinAI ACCGGT 1 cut(s) 2027
Ple19I CGATCG 2 cut(s) 127, 3765
PleI GAGTC 3 cut(s) 496, 577, 2455
PpsI GAGTC 3 cut(s) 496, 577, 2455
PpuMI RGGWCCY 2 cut(s) 169, 3747
PscI ACATGT 1 cut(s) 706
PsiI TTATAA 1 cut(s) 899
Psp124BI GAGCTC 1 cut(s) 2247
Psp5II RGGWCCY 2 cut(s) 169, 3747
Psp6I CCWGG 5 cut(s) 903, 2498, 2592, 3259, 3627
PspFI CCCAGC 5 cut(s) 950, 2914, 3218, 3458, 3527
PspGI CCWGG 5 cut(s) 903, 2498, 2592, 3259, 3627
PspN4I GGNNCC 7 cut(s) 2347, 2420, 2497, 2535, 3206, 3342, 3748
PspPI GGNCC 6 cut(s) 169, 1330, 2852, 3341, 3668, 3747
PspPPI RGGWCCY 2 cut(s) 169, 3747
PstI CTGCAG 1 cut(s) 1657
PsuI RGATCY 4 cut(s) 46, 891, 1816, 3479
PsyI GACNNNGTC 1 cut(s) 647
PvuI CGATCG 2 cut(s) 127, 3765
PvuII CAGCTG 1 cut(s) 857
RseI CAYNNNNRTG 4 cut(s) 711, 1291, 1916, 2441
SacI GAGCTC 1 cut(s) 2247
SalI GTCGAC 1 cut(s) 113
SapI GCTCTTC 1 cut(s) 844
Sau96I GGNCC 6 cut(s) 169, 1330, 2852, 3341, 3668, 3747
SchI GAGTC 3 cut(s) 496, 578, 2456
ScrFI CCNGG 9 cut(s) 412, 905, 2500, 2594, 2622, 3228, 3261, 3327, 3629
SduI GDGCHC 3 cut(s) 718, 1198, 2247
SfcI CTRYAG 2 cut(s) 781, 1653
SfuI TTCGAA 2 cut(s) 381, 2111
SinI GGWCC 6 cut(s) 169, 1330, 2852, 3341, 3668, 3747
SmiMI CAYNNNNRTG 4 cut(s) 711, 1291, 1916, 2441
SmlI CTYRAG 3 cut(s) 1931, 1940, 2335
SmoI CTYRAG 3 cut(s) 1931, 1940, 2335
SsiI CCGC 7 cut(s) 530, 2907, 3278, 3305, 3443, 3578, 3698
SspI AATATT 1 cut(s) 2331
SspMI CTAG 7 cut(s) 1244, 1497, 2175, 2825, 2978, 3684, 3741
SstI GAGCTC 1 cut(s) 2247
StyD4I CCNGG 9 cut(s) 410, 903, 2498, 2592, 2620, 3226, 3259, 3325, 3627
StyI CCWWGG 3 cut(s) 306, 696, 3731
TaaI ACNGT 7 cut(s) 112, 1376, 1895, 1964, 2409, 2700, 3406
TaiI ACGT 4 cut(s) 410, 1633, 1745, 2586
TaqI TCGA 9 cut(s) 114, 127, 361, 381, 1115, 1982, 2111, 2311, 2553
TatI WGTACW 2 cut(s) 2225, 2739
TauI GCSGC 2 cut(s) 2910, 3281
TfiI GAWTC 9 cut(s) 144, 221, 422, 946, 1070, 1112, 1469, 1493, 1945
TscAI CASTG 5 cut(s) 658, 1479, 2703, 3120, 3799
TseFI GTSAC 3 cut(s) 649, 3130, 3532
Tsp45I GTSAC 3 cut(s) 649, 3130, 3532
TspGWI ACGGA 3 cut(s) 530, 1865, 3149
TspRI CASTG 5 cut(s) 658, 1479, 2703, 3120, 3799
Tth111I GACNNNGTC 1 cut(s) 647
Van91I CCANNNNNTGG 1 cut(s) 2901
Vha464I CTTAAG 1 cut(s) 1931
VneI GTGCAC 1 cut(s) 714
VpaK11BI GGWCC 6 cut(s) 169, 1330, 2852, 3341, 3668, 3747
XapI RAATTY 7 cut(s) 321, 533, 789, 2185, 2264, 2300, 3472
XceI RCATGY 5 cut(s) 710, 722, 2101, 2226, 3607
XcmI CCANNNNNNNNNTGG 1 cut(s) 3484
XmiI GTMKAC 4 cut(s) 90, 114, 666, 1165
XmnI GAANNNNTTC 1 cut(s) 3472
XspI CTAG 7 cut(s) 1244, 1497, 2175, 2825, 2978, 3684, 3741
Zsp2I ATGCAT 2 cut(s) 1288, 1542
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.