Rorug05G0362800

Disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000085
Physical Location & Seq
Forward (+)
48070438 .. 48071262
825 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0362800.1

Sequence Viewer

Length: 825 bp
ATGGAACCACAACAACAGCAACCAACAGAGGAGGGAGGAAACACCCAAGCAGCTGGAAGTAGTGCCAACATGGATTTCTGGCGAAGCCGTACCAGGTGGATTCCTACTCCAGAACAAATAAGAATCCTCAAGGATCTTTACTACGTCAAGGGATTTAAGTGCCCAACTACAGAGCACATTCACGAGATCTGCCTCCAGCTGAACCAGTATGGACATGTTGAGGGTAAGAACATTTACTTTTGGTTCCAGAACGTCAGGGCTCGAGAGAAGCAGATGAATAGGTGTAATCAGGCTGCTCCAGTGCCCATGGGAACTAGTTCTCTTGGTACTGGTGGATCCATTGATCTCAATTTTGGGTCCACTGGTTCTACTGGTGCTGGTGGATCCATCGACATCAATTTTGGGCCAGCTGGTGGATCCATTGACATCAATTTTGGGTCCACTAGTTCTACTGATGATGGTAGATCCATTGATCTCAACTTTGGTTCCACCTATTCTACTGGTAATGAAGGATTTCTTGATTTAAATTTTGTTTCATATTCTTCCTCACCCTTCAATACTAATACCAGTACAACTCTTTTGGCACAACAGGAGGACGAACATCCCTGCAACAACGAGGAGGAGATCACCAGGAGGTTGAAACTCTTCCTCTGTTCCCCGTGCACGGCGAGGACGTCTTTGGTAACCCGAAGACTACATCCGAGGAAGGTAGCGTATTTGGTTACTATTCTGGTGGCTCAGGCGGTTACAACAGTGGCTCTAACGTTTCTCTTGAGCTCAGCCTCAATCCATCCGGAGCTGCTGACTAGGCTTAGCATAGCATAG

Protein Analysis

274

Amino Acids

30.07

Weight (kDa)

6.08

Isoelectric Point (pI)

44.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Homeodomain PF00046 30 - 91 2.9e-09 Homeodomain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000085)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g05721 FvH4_2g05721 FvH4_3g35820 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35920 FvH4_3g38670 FvH4_3g43650 FvH4_3g43650 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44070 FvH4_5g01271 FvH4_5g02970 FvH4_5g02970 FvH4_5g02970 FvH4_5g27640 FvH4_5g27640 FvH4_5g27640 FvH4_6g05393 FvH4_6g52372 FvH4_7g06680 FvH4_7g12671 FvH4_7g13640 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31510
malus_domestica MD09G1227900.v1.1 MD11G1019800.v1.1 MD11G1020500.v1.1
prunus_persica Prupe.1G542800_v2.0.a1 Prupe.1G542800_v2.0.a1
pyrus_communis pycom11g01460 pycom11g01490 pycom11g01530 pycom11g01570 pycom15g35490
rosa_chinensis RchiOBHm_Chr1g0353711 RchiOBHm_Chr3g0473211 RchiOBHm_Chr3g0473291 RchiOBHm_Chr3g0473341 RchiOBHm_Chr3g0473381 RchiOBHm_Chr3g0473391 RchiOBHm_Chr3g0473441 RchiOBHm_Chr3g0473481 RchiOBHm_Chr3g0473531 RchiOBHm_Chr3g0473561 RchiOBHm_Chr3g0473571 RchiOBHm_Chr3g0483491 RchiOBHm_Chr3g0488681 RchiOBHm_Chr5g0059311 RchiOBHm_Chr5g0061291 RchiOBHm_Chr5g0061301 RchiOBHm_Chr5g0061331 RchiOBHm_Chr5g0064081 RchiOBHm_Chr5g0064111 RchiOBHm_Chr5g0064151 RchiOBHm_Chr5g0064171 RchiOBHm_Chr5g0069721 RchiOBHm_Chr5g0069731 RchiOBHm_Chr5g0069741 RchiOBHm_Chr5g0078251 RchiOBHm_Chr5g0078301 RchiOBHm_Chr5g0079511 RchiOBHm_Chr5g0079791 RchiOBHm_Chr5g0079811 RchiOBHm_Chr5g0079861 RchiOBHm_Chr5g0079881 RchiOBHm_Chr5g0080241 RchiOBHm_Chr5g0080281 RchiOBHm_Chr5g0080371 RchiOBHm_Chr5g0080671 RchiOBHm_Chr6g0256601 RchiOBHm_Chr6g0274791 RchiOBHm_Chr7g0221971 RchiOBHm_Chr7g0221981
rosa_laevigata RLG00000002106 RLG00000013523 RLG00000014806 RLG00000024010 RLG00000035451 RLG00000035455 RLG00000035464 RLG00000035705 RLG00000036094 RLG00000036817 RLG00000036825 RLG00000036826 RLG00000036848
rosa_multiflora Rmu_co8200400.1_g000001 Rmu_co8473147.1_g000001 Rmu_sc0000394.1_g000030 Rmu_sc0000555.1_g000030 Rmu_sc0000595.1_g000002 Rmu_sc0000595.1_g000006 Rmu_sc0000595.1_g000029 Rmu_sc0000689.1_g000018 Rmu_sc0000689.1_g000032 Rmu_sc0000689.1_g000041 Rmu_sc0000738.1_g000025 Rmu_sc0000826.1_g000016 Rmu_sc0000908.1_g000016 Rmu_sc0000908.1_g000019 Rmu_sc0000908.1_g000021 Rmu_sc0001208.1_g000087 Rmu_sc0001639.1_g000004 Rmu_sc0002075.1_g000004 Rmu_sc0002075.1_g000009 Rmu_sc0002187.1_g000042 Rmu_sc0002187.1_g000043 Rmu_sc0002187.1_g000060 Rmu_sc0002513.1_g000025 Rmu_sc0002983.1_g000008 Rmu_sc0003012.1_g000004 Rmu_sc0003069.1_g000019 Rmu_sc0003069.1_g000020 Rmu_sc0003069.1_g000047 Rmu_sc0003069.1_g000051 Rmu_sc0003069.1_g000053 Rmu_sc0003131.1_g000014 Rmu_sc0003514.1_g000003 Rmu_sc0003547.1_g000006 Rmu_sc0003547.1_g000008 Rmu_sc0004325.1_g000021 Rmu_sc0004482.1_g000004 Rmu_sc0004482.1_g000022 Rmu_sc0005006.1_g000004 Rmu_sc0005006.1_g000009 Rmu_sc0005006.1_g000010 Rmu_sc0005194.1_g000002 Rmu_sc0005194.1_g000003 Rmu_sc0005834.1_g000002 Rmu_sc0005947.1_g000023 Rmu_sc0006792.1_g000026 Rmu_sc0007612.1_g000001 Rmu_sc0007793.1_g000024 Rmu_sc0007793.1_g000025 Rmu_sc0008050.1_g000015 Rmu_sc0008336.1_g000003 Rmu_sc0010248.1_g000002 Rmu_sc0011921.1_g000001 Rmu_sc0011921.1_g000006 Rmu_sc0012138.1_g000001 Rmu_sc0016164.1_g000015 Rmu_sc0018807.1_g000005 Rmu_sc0030948.1_g000001 Rmu_sc0042587.1_g000001 Rmu_ssc0000170.1_g000020 Rmu_ssc0000170.1_g000026 Rmu_ssc0000170.1_g000029
rosa_roxburghii Rroxscaffold_1G00003040 Rroxscaffold_1G00003080 Rroxscaffold_1G00003430 Rroxscaffold_1G00003490 Rroxscaffold_1G00011370 Rroxscaffold_1G00016780 Rroxscaffold_1G00019390 Rroxscaffold_1G00019400 Rroxscaffold_1G00019420 Rroxscaffold_1G00021170 Rroxscaffold_3G00237530 Rroxscaffold_3G00246470 Rroxscaffold_4G00301730 Rroxscaffold_4G00309300 Rroxscaffold_6G00398250 Rroxscaffold_6G00398270 Rroxscaffold_6G00398280 Rroxscaffold_6G00408070 Rroxscaffold_7G00193940 Rroxscaffold_7G00209570
rosa_rugosa Rorug01G0237100 Rorug03G0098200 Rorug03G0132200 Rorug03G0132400 Rorug03G0132500 Rorug03G0132500 Rorug03G0132500 Rorug03G0132700 Rorug03G0132800 Rorug03G0205900 Rorug03G0206100 Rorug03G0206100 Rorug03G0206300 Rorug03G0206400 Rorug03G0206400 Rorug03G0240700 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug05G0322400 Rorug05G0339300 Rorug05G0339500 Rorug05G0362200 Rorug05G0362300 Rorug05G0362400 Rorug05G0362600 Rorug05G0362700 Rorug05G0362800 Rorug05G0363100 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0459900 Rorug05G0464600 Rorug05G0465000 Rorug05G0465100 Rorug05G0465200 Rorug05G0466000 Rorug05G0466300 Rorug05G0466400 Rorug05G0466500 Rorug05G0466600 Rorug05G0466700 Rorug05G0466700 Rorug05G0466700 Rorug05G0466800 Rorug05G0466900 Rorug05G0468100 Rorug05G0562200 Rorug05G0562300 Rorug06G0084400 Rorug06G0084500 Rorug06G0084500 Rorug06G0084600 Rorug07G0136400 Rorug07G0204500 Rorug07G0204600 Rorug07G0221500
rosa_samantha Rh5CG438200 Rh5CG569900 Rh6AG080700 Rh7CG362800 Rh7DG275900 Rh7DG343100
rosa_wichuraiana Rw0G004790 Rw0G008160 Rw0G008170 Rw0G008200 Rw0G008210 Rw0G012980 Rw0G013670 Rw0G019920 Rw0G020380 Rw0G022790 Rw0G022800 Rw0G023350 Rw1G005530 Rw1G021740 Rw3G013910 Rw3G015980 Rw3G023020 Rw3G023030 Rw3G025580 Rw5G027180 Rw5G037760 Rw5G037770 Rw5G037780 Rw5G037790 Rw5G037810 Rw5G037820 Rw5G039500 Rw5G039520 Rw5G039530 Rw5G039540 Rw5G039550 Rw5G039570 Rw5G039580 Rw5G039610 Rw5G039630 Rw5G039660 Rw5G042590 Rw5G047840 Rw5G048170 Rw5G048400 Rw5G048470 Rw5G048540 Rw6G007030 Rw6G007080 Rw6G007460 Rw6G017430 Rw7G023150 Rw7G023260 Rw7G029260 Rw7G029270 Rw7G030950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 677
AccB7I CCANNNNNTGG 1 cut(s) 413
AccIII TCCGGA 1 cut(s) 793
AciI CCGC 1 cut(s) 743
AclI AACGTT 1 cut(s) 764
AclWI GGATC 8 cut(s) 141, 330, 343, 378, 391, 411, 424, 459
AcsI RAATTY 1 cut(s) 526
AcyI GRCGYC 1 cut(s) 674
AfaI GTAC 3 cut(s) 91, 328, 571
AfiI CCNNNNNNNGG 2 cut(s) 413, 664
AflIII ACRYGT 1 cut(s) 214
AgsI TTSAA 2 cut(s) 556, 640
AhlI ACTAGT 2 cut(s) 314, 443
AjnI CCWGG 2 cut(s) 92, 629
AjuI GAANNNNNNNTTGG 2 cut(s) 59, 91
AluBI AGCT 5 cut(s) 53, 199, 410, 777, 799
AluI AGCT 5 cut(s) 53, 199, 410, 777, 799
Alw21I GWGCWC 3 cut(s) 177, 665, 779
Alw44I GTGCAC 1 cut(s) 661
AlwI GGATC 8 cut(s) 141, 330, 343, 378, 391, 411, 424, 459
Ama87I CYCGRG 1 cut(s) 261
Aor13HI TCCGGA 1 cut(s) 793
AoxI GGCC 1 cut(s) 404
ApaLI GTGCAC 1 cut(s) 661
ApeKI GCWGC 3 cut(s) 50, 293, 799
ApoI RAATTY 1 cut(s) 526
ArsI GACNNNNNNTTYG 4 cut(s) 383, 415, 416, 448
Asp700I GAANNNNTTC 3 cut(s) 316, 513, 644
AspS9I GGNCC 3 cut(s) 357, 404, 438
AsuHPI GGTGA 2 cut(s) 540, 619
AvaI CYCGRG 1 cut(s) 261
AvaII GGWCC 2 cut(s) 357, 438
BaeGI GKGCMC 3 cut(s) 164, 306, 665
BamHI GGATCC 3 cut(s) 335, 383, 416
BanII GRGCYC 2 cut(s) 262, 779
BauI CACGAG 1 cut(s) 182
BbsI GAAGAC 1 cut(s) 697
Bbv12I GWGCWC 3 cut(s) 177, 665, 779
BbvI GCAGC 3 cut(s) 62, 280, 786
BccI CCATC 3 cut(s) 395, 452, 798
BceAI ACGGC 2 cut(s) 72, 681
BciT130I CCWGG 2 cut(s) 94, 631
BcuI ACTAGT 2 cut(s) 314, 443
BfaI CTAG 3 cut(s) 315, 444, 807
BfmI CTRYAG 1 cut(s) 168
BglII AGATCT 1 cut(s) 186
BisI GCNGC 3 cut(s) 51, 294, 800
BlpI GCTNAGC 2 cut(s) 778, 812
BlsI GCNGC 3 cut(s) 52, 295, 801
Bme1390I CCNGG 2 cut(s) 94, 631
Bme18I GGWCC 2 cut(s) 357, 438
BmeT110I CYCGRG 1 cut(s) 261
BmgT120I GGNCC 3 cut(s) 357, 404, 438
BmiI GGNNCC 8 cut(s) 6, 245, 337, 358, 385, 418, 439, 487
BmrFI CCNGG 2 cut(s) 94, 631
BpiI GAAGAC 1 cut(s) 697
BpmI CTGGAG 3 cut(s) 93, 179, 282
Bpu10I CCTNAGC 1 cut(s) 738
Bpu1102I GCTNAGC 2 cut(s) 778, 812
BpuEI CTTGAG 2 cut(s) 113, 793
BsaHI GRCGYC 1 cut(s) 674
BsaJI CCNNGG 2 cut(s) 306, 701
BsaWI WCCGGW 1 cut(s) 793
Bsc4I CCNNNNNNNGG 2 cut(s) 413, 664
Bse1I ACTGG 7 cut(s) 205, 299, 334, 367, 376, 505, 567
BseAI TCCGGA 1 cut(s) 793
BseBI CCWGG 2 cut(s) 94, 631
BseDI CCNNGG 2 cut(s) 306, 701
BseGI GGATG 3 cut(s) 601, 697, 790
BseLI CCNNNNNNNGG 2 cut(s) 413, 664
BseMII CTCAG 2 cut(s) 752, 792
BseNI ACTGG 7 cut(s) 205, 299, 334, 367, 376, 505, 567
BseRI GAGGAG 3 cut(s) 44, 632, 635
BseSI GKGCMC 3 cut(s) 164, 306, 665
BseXI GCAGC 3 cut(s) 62, 280, 786
BshFI GGCC 1 cut(s) 406
BsiHKAI GWGCWC 3 cut(s) 177, 665, 779
BsiHKCI CYCGRG 1 cut(s) 261
BsiSI CCGG 1 cut(s) 794
BslI CCNNNNNNNGG 2 cut(s) 413, 664
BsnI GGCC 1 cut(s) 406
BsoBI CYCGRG 1 cut(s) 261
Bsp1286I GDGCHC 6 cut(s) 164, 177, 262, 306, 665, 779
Bsp13I TCCGGA 1 cut(s) 793
Bsp143I GATC 9 cut(s) 133, 186, 335, 343, 383, 416, 464, 472, 624
Bsp1720I GCTNAGC 2 cut(s) 778, 812
Bsp19I CCATGG 1 cut(s) 306
BspACI CCGC 1 cut(s) 743
BspANI GGCC 1 cut(s) 406
BspCNI CTCAG 2 cut(s) 751, 791
BspEI TCCGGA 1 cut(s) 793
BspLI GGNNCC 8 cut(s) 6, 245, 337, 358, 385, 418, 439, 487
BspPI GGATC 8 cut(s) 141, 330, 343, 378, 391, 411, 424, 459
BsrI ACTGG 7 cut(s) 205, 299, 334, 367, 376, 505, 567
BssECI CCNNGG 2 cut(s) 306, 701
BssMI GATC 9 cut(s) 133, 186, 335, 343, 383, 416, 464, 472, 624
BssNI GRCGYC 1 cut(s) 674
BssSI CACGAG 1 cut(s) 182
BssT1I CCWWGG 1 cut(s) 306
Bst2BI CACGAG 1 cut(s) 182
Bst2UI CCWGG 2 cut(s) 94, 631
Bst4CI ACNGT 1 cut(s) 754
Bst6I CTCTTC 1 cut(s) 650
BstACI GRCGYC 1 cut(s) 674
BstC8I GCNNGC 1 cut(s) 408
BstDEI CTNAG 3 cut(s) 738, 778, 812
BstDSI CCRYGG 1 cut(s) 306
BstEII GGTNACC 1 cut(s) 682
BstF5I GGATG 3 cut(s) 601, 697, 790
BstKTI GATC 9 cut(s) 136, 189, 338, 346, 386, 419, 467, 475, 627
BstMBI GATC 9 cut(s) 133, 186, 335, 343, 383, 416, 464, 472, 624
BstMWI GCNNNNNNNGC 1 cut(s) 808
BstNI CCWGG 2 cut(s) 94, 631
BstNSI RCATGY 1 cut(s) 218
BstPI GGTNACC 1 cut(s) 682
BstSCI CCNGG 2 cut(s) 92, 629
BstSFI CTRYAG 1 cut(s) 168
BstSLI GKGCMC 3 cut(s) 164, 306, 665
BstV1I GCAGC 3 cut(s) 62, 280, 786
BstV2I GAAGAC 1 cut(s) 697
BstX2I RGATCY 6 cut(s) 133, 186, 335, 383, 416, 464
BstXI CCANNNNNNTGG 1 cut(s) 53
BstYI RGATCY 6 cut(s) 133, 186, 335, 383, 416, 464
BsuRI GGCC 1 cut(s) 406
BtgI CCRYGG 1 cut(s) 306
BtsCI GGATG 3 cut(s) 601, 697, 790
BtsIMutI CAGTG 3 cut(s) 306, 360, 759
Cac8I GCNNGC 1 cut(s) 408
Cfr13I GGNCC 3 cut(s) 357, 404, 438
CsiI ACCWGGT 1 cut(s) 92
Csp6I GTAC 3 cut(s) 90, 327, 570
CviAII CATG 3 cut(s) 70, 215, 307
CviQI GTAC 3 cut(s) 90, 327, 570
DdeI CTNAG 3 cut(s) 738, 778, 812
DpnI GATC 9 cut(s) 135, 188, 337, 345, 385, 418, 466, 474, 626
DpnII GATC 9 cut(s) 133, 186, 335, 343, 383, 416, 464, 472, 624
DraI TTTAAA 1 cut(s) 525
Eam1104I CTCTTC 1 cut(s) 650
EarI CTCTTC 1 cut(s) 650
Ecl136II GAGCTC 1 cut(s) 777
Eco130I CCWWGG 1 cut(s) 306
Eco24I GRGCYC 2 cut(s) 262, 779
Eco47I GGWCC 2 cut(s) 357, 438
Eco53kI GAGCTC 1 cut(s) 777
Eco88I CYCGRG 1 cut(s) 261
Eco91I GGTNACC 1 cut(s) 682
EcoICRI GAGCTC 1 cut(s) 777
EcoO65I GGTNACC 1 cut(s) 682
EcoRII CCWGG 2 cut(s) 92, 629
EcoT14I CCWWGG 1 cut(s) 306
EcoT38I GRGCYC 2 cut(s) 262, 779
ErhI CCWWGG 1 cut(s) 306
FaeI CATG 3 cut(s) 73, 218, 310
FaiI YATR 7 cut(s) 71, 210, 216, 308, 538, 818, 823
FalI AAGNNNNNCTT 2 cut(s) 501, 533
FatI CATG 3 cut(s) 69, 214, 306
Fnu4HI GCNGC 3 cut(s) 51, 294, 800
FokI GGATG 3 cut(s) 588, 684, 777
FriOI GRGCYC 2 cut(s) 262, 779
Fsp4HI GCNGC 3 cut(s) 51, 294, 800
FspBI CTAG 3 cut(s) 315, 444, 807
GluI GCNGC 3 cut(s) 51, 294, 800
GsuI CTGGAG 3 cut(s) 93, 179, 282
HaeIII GGCC 1 cut(s) 406
HapII CCGG 1 cut(s) 794
Hin1I GRCGYC 1 cut(s) 674
Hin1II CATG 3 cut(s) 73, 218, 310
HinfI GANTC 2 cut(s) 100, 123
HpaII CCGG 1 cut(s) 794
HphI GGTGA 2 cut(s) 540, 619
Hpy166II GTNNAC 3 cut(s) 360, 441, 663
Hpy188I TCNGA 1 cut(s) 702
Hpy188III TCNNGA 7 cut(s) 110, 182, 247, 263, 518, 772, 794
Hpy8I GTNNAC 3 cut(s) 360, 441, 663
HpyAV CCTTC 3 cut(s) 503, 562, 700
HpyCH4III ACNGT 1 cut(s) 754
HpyCH4IV ACGT 4 cut(s) 144, 252, 674, 764
HpyCH4V TGCA 2 cut(s) 609, 663
HpyF10VI GCNNNNNNNGC 1 cut(s) 808
HpyF3I CTNAG 3 cut(s) 738, 778, 812
HpySE526I ACGT 4 cut(s) 144, 252, 674, 764
Hsp92I GRCGYC 1 cut(s) 674
Hsp92II CATG 3 cut(s) 73, 218, 310
Kpn2I TCCGGA 1 cut(s) 793
Kzo9I GATC 9 cut(s) 133, 186, 335, 343, 383, 416, 464, 472, 624
LmnI GCTCC 2 cut(s) 301, 796
Lsp1109I GCAGC 3 cut(s) 62, 280, 786
MabI ACCWGGT 1 cut(s) 92
MaeI CTAG 3 cut(s) 315, 444, 807
MaeII ACGT 4 cut(s) 144, 252, 674, 764
MaeIII GTNAC 3 cut(s) 682, 721, 745
MalI GATC 9 cut(s) 135, 188, 337, 345, 385, 418, 466, 474, 626
MboI GATC 9 cut(s) 133, 186, 335, 343, 383, 416, 464, 472, 624
MboII GAAGA 3 cut(s) 534, 637, 702
MflI RGATCY 6 cut(s) 133, 186, 335, 383, 416, 464
MhlI GDGCHC 6 cut(s) 164, 177, 262, 306, 665, 779
MluCI AATT 4 cut(s) 349, 397, 430, 526
MroI TCCGGA 1 cut(s) 793
MroXI GAANNNNTTC 3 cut(s) 316, 513, 644
MseI TTAA 2 cut(s) 156, 524
MspA1I CMGCKG 3 cut(s) 53, 199, 410
MspI CCGG 1 cut(s) 794
MspR9I CCNGG 2 cut(s) 94, 631
MvaI CCWGG 2 cut(s) 94, 631
MwoI GCNNNNNNNGC 1 cut(s) 808
NcoI CCATGG 1 cut(s) 306
NdeII GATC 9 cut(s) 133, 186, 335, 343, 383, 416, 464, 472, 624
NlaIII CATG 3 cut(s) 73, 218, 310
NlaIV GGNNCC 8 cut(s) 6, 245, 337, 358, 385, 418, 439, 487
NspI RCATGY 1 cut(s) 218
PaeR7I CTCGAG 1 cut(s) 261
PciI ACATGT 1 cut(s) 214
PcsI WCGNNNNNNNCGW 1 cut(s) 671
PdmI GAANNNNTTC 3 cut(s) 316, 513, 644
PfeI GAWTC 2 cut(s) 100, 123
PflMI CCANNNNNTGG 1 cut(s) 413
PkrI GCNGC 3 cut(s) 52, 295, 801
PscI ACATGT 1 cut(s) 214
Psp124BI GAGCTC 1 cut(s) 779
Psp1406I AACGTT 1 cut(s) 764
Psp6I CCWGG 2 cut(s) 92, 629
PspEI GGTNACC 1 cut(s) 682
PspGI CCWGG 2 cut(s) 92, 629
PspN4I GGNNCC 8 cut(s) 6, 245, 337, 358, 385, 418, 439, 487
PspPI GGNCC 3 cut(s) 357, 404, 438
PsuI RGATCY 6 cut(s) 133, 186, 335, 383, 416, 464
PvuII CAGCTG 3 cut(s) 53, 199, 410
RsaI GTAC 3 cut(s) 91, 328, 571
RsaNI GTAC 3 cut(s) 90, 327, 570
SacI GAGCTC 1 cut(s) 779
SaqAI TTAA 2 cut(s) 156, 524
SatI GCNGC 3 cut(s) 51, 294, 800
Sau3AI GATC 9 cut(s) 133, 186, 335, 343, 383, 416, 464, 472, 624
Sau96I GGNCC 3 cut(s) 357, 404, 438
ScrFI CCNGG 2 cut(s) 94, 631
SduI GDGCHC 6 cut(s) 164, 177, 262, 306, 665, 779
SexAI ACCWGGT 1 cut(s) 92
SfcI CTRYAG 1 cut(s) 168
Sfr274I CTCGAG 1 cut(s) 261
SinI GGWCC 2 cut(s) 357, 438
SlaI CTCGAG 1 cut(s) 261
SmiI ATTTAAAT 1 cut(s) 525
SmlI CTYRAG 3 cut(s) 128, 261, 772
SmoI CTYRAG 3 cut(s) 128, 261, 772
SpeI ACTAGT 2 cut(s) 314, 443
Sse9I AATT 4 cut(s) 349, 397, 430, 526
SsiI CCGC 1 cut(s) 743
SspMI CTAG 3 cut(s) 315, 444, 807
SstI GAGCTC 1 cut(s) 779
StyD4I CCNGG 2 cut(s) 92, 629
StyI CCWWGG 1 cut(s) 306
SwaI ATTTAAAT 1 cut(s) 525
TaaI ACNGT 1 cut(s) 754
TaiI ACGT 4 cut(s) 147, 255, 677, 767
TaqI TCGA 2 cut(s) 262, 390
TasI AATT 4 cut(s) 349, 397, 430, 526
TatI WGTACW 1 cut(s) 569
TfiI GAWTC 2 cut(s) 100, 123
Tru1I TTAA 2 cut(s) 156, 524
Tru9I TTAA 2 cut(s) 156, 524
TscAI CASTG 3 cut(s) 306, 367, 759
TseI GCWGC 3 cut(s) 50, 293, 799
TspDTI ATGAA 3 cut(s) 290, 522, 525
TspRI CASTG 3 cut(s) 306, 367, 759
Van91I CCANNNNNTGG 1 cut(s) 413
VneI GTGCAC 1 cut(s) 661
VpaK11BI GGWCC 2 cut(s) 357, 438
XapI RAATTY 1 cut(s) 526
XceI RCATGY 1 cut(s) 218
XhoI CTCGAG 1 cut(s) 261
XmnI GAANNNNTTC 3 cut(s) 316, 513, 644
XspI CTAG 3 cut(s) 315, 444, 807
ZraI GACGTC 1 cut(s) 675
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.