Rmu_sc0005006.1_g000004

Disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005006.1
OG0000085
Physical Location & Seq
Reverse (-)
13984 .. 16629
2646 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005006.1_g000004.1.cds

Sequence Viewer

Length: 2484 bp
atggctttgagcatcccaagtgcttctgctcgtcagtggaagtatgatgtgtttttgagtttcaggggtgaaactcgccatggttttgtatcccatttatatgatgaattggaaagcacaggaatgattagcacattcatggatgaggaaaagctggaagtagggaaggctatttctccaaatcttgtaatggcaattgaagaatcaaggtttgctatagttgttctgtcgccaaactatgcttcttctccttggtgtttggatgaacttgcaaaggttcttcaatccatggaagggagggacagaatcctgccaattttctatcatgtggatccttctcatgtacgacatcaactggggagttttgcagaagcctttactaagcatgaagaaaattctaggcacagcaaacagaagttggaccagtggagacttgctttaaaaaatgtggccgatctctctggatgggatgcaaagaatttgcggtctgaaagagaacttgttaaacgcattgtgaaatttgtctgcaataaggcacttcaagtatcaccacggcctattccaattgagttcaaagcgcagcctaccgaatatattgaatcaacaacacgggccagggatatgcttactcagctgctggaagataatgaaattactgtcatcggggttttcggcaagggaggtgttggcaagagaactatggtgaaacatgtcggcgcacaagcccgagaacttaggcttgttcattatgtgatcagggctgttgtagcccagagccctgatttgagaaatattcaaagcacattggccaatcagctgggcttaaaattcgaggaggaggagacagaaattggaagagccgctagattgaaggagaggataatgggaggaaataaaatcctcatagtcttagtcgacatttggcggagaatagatttgtcaagcataggaattcccaattacaaccagcttcaaagacacaattccaaactcatactaacctcaaggagcagaagtgtttgctattccatgcagtgccaagcaagcattcctctccctatcttatcagaagaagattcttggaacttgagatctgatgatgccaaatcattcttcttgctatgctgtctattcccagaagactatgatatcccattcgaagacttgctcaagtatgcaatcgggaaagggttgcttcaagatgccaacacaatccaagaagccagagcaacagcaaatttggtgatcaattccctcaaagctttcagcctacttttggaaggtacaaaggagggatgtgtaaggatgcatgatgtagtgcgggatgtagccctgtcgatttcgttttctgaagatggtcataaatttttggtaaaagctggttgtgaattacagcattggccaaggattaaagcgcatggaggctattctgcaatctcactaatgaggaacaaaatttgcaagcttcccaaagagttggtaagctcaaaactccagattttattactacaaattaacgctgctatatgtgcgatcccaaacaacttttttcaaagtatgaatggactgatggtcctagatcttagcttcaccagtatctcatgtctaccccgatccttcactcacctaaccaatctccgaggtttgtatttggattattgcaacaagatgattgacatatccatattcttaaacctgaagaaacttgagattcttagtatgaaagaatttcctcttgaggagttgccattagaaataggagagttgaccaatctaaggatgctcgacttaagcgggagttacaatattggtagcattccatgtaatataatgtcaagattgtataaattggaagaactgtacatgcaaggtaattttggggactggggaggaggacgatacaaaactaatgctggttttgatgagttgattggcttgcaatacttaaacattgtgaagcttcgcatatctgatgcacaatgcttgcctacaaatgttgtattcaatttcaattggttaattttcgatatatgtatcagcagagaatcaccatctagagactactcttcaaaaccttattgctcacacgatctttcaagaaccttgactcttagcacaactgttagtgccaatttcggcatcaacgagtcaacagaggttccgttgaaatccaagtgtaaagtggtatgccctggtagtactgtgcctagccttggtcgttcacctcttgtgactgaaggtatggcctcgggcttccttcacctgatcctgggcctccaagctaccttgtttcgtgaaactgatagtctcgtctctgacttccttcacctggtgttgggcttcctccacctaatgttgggcttccaagctcctttcttgggtggaactgatggcttcacgtcgcgcttcctccacctcgtgttgggcttccaaggtccttgttgggtgaagctaatagtctcgtctcggacttacttcgtctga

Protein Analysis

827

Amino Acids

93.14

Weight (kDa)

7.99

Isoelectric Point (pI)

50.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000085)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g05721 FvH4_2g05721 FvH4_3g35820 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35920 FvH4_3g38670 FvH4_3g43650 FvH4_3g43650 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44070 FvH4_5g01271 FvH4_5g02970 FvH4_5g02970 FvH4_5g02970 FvH4_5g27640 FvH4_5g27640 FvH4_5g27640 FvH4_6g05393 FvH4_6g52372 FvH4_7g06680 FvH4_7g12671 FvH4_7g13640 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31510
malus_domestica MD09G1227900.v1.1 MD11G1019800.v1.1 MD11G1020500.v1.1
prunus_persica Prupe.1G542800_v2.0.a1 Prupe.1G542800_v2.0.a1
pyrus_communis pycom11g01460 pycom11g01490 pycom11g01530 pycom11g01570 pycom15g35490
rosa_chinensis RchiOBHm_Chr1g0353711 RchiOBHm_Chr3g0473211 RchiOBHm_Chr3g0473291 RchiOBHm_Chr3g0473341 RchiOBHm_Chr3g0473381 RchiOBHm_Chr3g0473391 RchiOBHm_Chr3g0473441 RchiOBHm_Chr3g0473481 RchiOBHm_Chr3g0473531 RchiOBHm_Chr3g0473561 RchiOBHm_Chr3g0473571 RchiOBHm_Chr3g0483491 RchiOBHm_Chr3g0488681 RchiOBHm_Chr5g0059311 RchiOBHm_Chr5g0061291 RchiOBHm_Chr5g0061301 RchiOBHm_Chr5g0061331 RchiOBHm_Chr5g0064081 RchiOBHm_Chr5g0064111 RchiOBHm_Chr5g0064151 RchiOBHm_Chr5g0064171 RchiOBHm_Chr5g0069721 RchiOBHm_Chr5g0069731 RchiOBHm_Chr5g0069741 RchiOBHm_Chr5g0078251 RchiOBHm_Chr5g0078301 RchiOBHm_Chr5g0079511 RchiOBHm_Chr5g0079791 RchiOBHm_Chr5g0079811 RchiOBHm_Chr5g0079861 RchiOBHm_Chr5g0079881 RchiOBHm_Chr5g0080241 RchiOBHm_Chr5g0080281 RchiOBHm_Chr5g0080371 RchiOBHm_Chr5g0080671 RchiOBHm_Chr6g0256601 RchiOBHm_Chr6g0274791 RchiOBHm_Chr7g0221971 RchiOBHm_Chr7g0221981
rosa_laevigata RLG00000002106 RLG00000013523 RLG00000014806 RLG00000024010 RLG00000035451 RLG00000035455 RLG00000035464 RLG00000035705 RLG00000036094 RLG00000036817 RLG00000036825 RLG00000036826 RLG00000036848
rosa_multiflora Rmu_co8200400.1_g000001 Rmu_co8473147.1_g000001 Rmu_sc0000394.1_g000030 Rmu_sc0000555.1_g000030 Rmu_sc0000595.1_g000002 Rmu_sc0000595.1_g000006 Rmu_sc0000595.1_g000029 Rmu_sc0000689.1_g000018 Rmu_sc0000689.1_g000032 Rmu_sc0000689.1_g000041 Rmu_sc0000738.1_g000025 Rmu_sc0000826.1_g000016 Rmu_sc0000908.1_g000016 Rmu_sc0000908.1_g000019 Rmu_sc0000908.1_g000021 Rmu_sc0001208.1_g000087 Rmu_sc0001639.1_g000004 Rmu_sc0002075.1_g000004 Rmu_sc0002075.1_g000009 Rmu_sc0002187.1_g000042 Rmu_sc0002187.1_g000043 Rmu_sc0002187.1_g000060 Rmu_sc0002513.1_g000025 Rmu_sc0002983.1_g000008 Rmu_sc0003012.1_g000004 Rmu_sc0003069.1_g000019 Rmu_sc0003069.1_g000020 Rmu_sc0003069.1_g000047 Rmu_sc0003069.1_g000051 Rmu_sc0003069.1_g000053 Rmu_sc0003131.1_g000014 Rmu_sc0003514.1_g000003 Rmu_sc0003547.1_g000006 Rmu_sc0003547.1_g000008 Rmu_sc0004325.1_g000021 Rmu_sc0004482.1_g000004 Rmu_sc0004482.1_g000022 Rmu_sc0005006.1_g000004 Rmu_sc0005006.1_g000009 Rmu_sc0005006.1_g000010 Rmu_sc0005194.1_g000002 Rmu_sc0005194.1_g000003 Rmu_sc0005834.1_g000002 Rmu_sc0005947.1_g000023 Rmu_sc0006792.1_g000026 Rmu_sc0007612.1_g000001 Rmu_sc0007793.1_g000024 Rmu_sc0007793.1_g000025 Rmu_sc0008050.1_g000015 Rmu_sc0008336.1_g000003 Rmu_sc0010248.1_g000002 Rmu_sc0011921.1_g000001 Rmu_sc0011921.1_g000006 Rmu_sc0012138.1_g000001 Rmu_sc0016164.1_g000015 Rmu_sc0018807.1_g000005 Rmu_sc0030948.1_g000001 Rmu_sc0042587.1_g000001 Rmu_ssc0000170.1_g000020 Rmu_ssc0000170.1_g000026 Rmu_ssc0000170.1_g000029
rosa_roxburghii Rroxscaffold_1G00003040 Rroxscaffold_1G00003080 Rroxscaffold_1G00003430 Rroxscaffold_1G00003490 Rroxscaffold_1G00011370 Rroxscaffold_1G00016780 Rroxscaffold_1G00019390 Rroxscaffold_1G00019400 Rroxscaffold_1G00019420 Rroxscaffold_1G00021170 Rroxscaffold_3G00237530 Rroxscaffold_3G00246470 Rroxscaffold_4G00301730 Rroxscaffold_4G00309300 Rroxscaffold_6G00398250 Rroxscaffold_6G00398270 Rroxscaffold_6G00398280 Rroxscaffold_6G00408070 Rroxscaffold_7G00193940 Rroxscaffold_7G00209570
rosa_rugosa Rorug01G0237100 Rorug03G0098200 Rorug03G0132200 Rorug03G0132400 Rorug03G0132500 Rorug03G0132500 Rorug03G0132500 Rorug03G0132700 Rorug03G0132800 Rorug03G0205900 Rorug03G0206100 Rorug03G0206100 Rorug03G0206300 Rorug03G0206400 Rorug03G0206400 Rorug03G0240700 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug05G0322400 Rorug05G0339300 Rorug05G0339500 Rorug05G0362200 Rorug05G0362300 Rorug05G0362400 Rorug05G0362600 Rorug05G0362700 Rorug05G0362800 Rorug05G0363100 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0459900 Rorug05G0464600 Rorug05G0465000 Rorug05G0465100 Rorug05G0465200 Rorug05G0466000 Rorug05G0466300 Rorug05G0466400 Rorug05G0466500 Rorug05G0466600 Rorug05G0466700 Rorug05G0466700 Rorug05G0466700 Rorug05G0466800 Rorug05G0466900 Rorug05G0468100 Rorug05G0562200 Rorug05G0562300 Rorug06G0084400 Rorug06G0084500 Rorug06G0084500 Rorug06G0084600 Rorug07G0136400 Rorug07G0204500 Rorug07G0204600 Rorug07G0221500
rosa_samantha Rh5CG438200 Rh5CG569900 Rh6AG080700 Rh7CG362800 Rh7DG275900 Rh7DG343100
rosa_wichuraiana Rw0G004790 Rw0G008160 Rw0G008170 Rw0G008200 Rw0G008210 Rw0G012980 Rw0G013670 Rw0G019920 Rw0G020380 Rw0G022790 Rw0G022800 Rw0G023350 Rw1G005530 Rw1G021740 Rw3G013910 Rw3G015980 Rw3G023020 Rw3G023030 Rw3G025580 Rw5G027180 Rw5G037760 Rw5G037770 Rw5G037780 Rw5G037790 Rw5G037810 Rw5G037820 Rw5G039500 Rw5G039520 Rw5G039530 Rw5G039540 Rw5G039550 Rw5G039570 Rw5G039580 Rw5G039610 Rw5G039630 Rw5G039660 Rw5G042590 Rw5G047840 Rw5G048170 Rw5G048400 Rw5G048470 Rw5G048540 Rw6G007030 Rw6G007080 Rw6G007460 Rw6G017430 Rw7G023150 Rw7G023260 Rw7G029260 Rw7G029270 Rw7G030950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 915, 1606
AccII CGCG 1 cut(s) 2404
AciI CCGC 5 cut(s) 484, 861, 925, 1321, 1794
AclWI GGATC 5 cut(s) 326, 339, 1528, 1608, 2260
AcoI YGGCCR 3 cut(s) 450, 807, 1400
AcsI RAATTY 9 cut(s) 394, 478, 518, 827, 951, 1237, 1364, 1455, 1727
AcuI CTGAAG 3 cut(s) 1371, 1718, 2256
AdeI CACNNNGTG 2 cut(s) 2332, 2419
AfaI GTAC 4 cut(s) 345, 1285, 1862, 2200
AflII CTTAAG 1 cut(s) 1789
AflIII ACRYGT 1 cut(s) 709
AhdI GACNNNNNGTC 1 cut(s) 1571
AjiI CACGTC 1 cut(s) 2400
AjnI CCWGG 4 cut(s) 614, 2191, 2268, 2328
AjuI GAANNNNNNNTTGG 6 cut(s) 226, 258, 1032, 1064, 1097, 1129
Alw26I GTCTC 7 cut(s) 424, 836, 2052, 2312, 2317, 2464, 2469
AlwI GGATC 5 cut(s) 326, 339, 1528, 1608, 2260
AlwNI CAGNNNCTG 1 cut(s) 637
Ama87I CYCGRG 2 cut(s) 726, 2248
AoxI GGCC 7 cut(s) 450, 554, 612, 807, 1400, 2244, 2272
ApeKI GCWGC 3 cut(s) 580, 634, 1520
ApoI RAATTY 9 cut(s) 394, 478, 518, 827, 951, 1237, 1364, 1455, 1727
AspLEI GCGC 4 cut(s) 580, 719, 1417, 2406
AspS9I GGNCC 5 cut(s) 421, 612, 1573, 2272, 2435
AsuII TTCGAA 1 cut(s) 1158
AvaI CYCGRG 2 cut(s) 726, 2248
AvaII GGWCC 3 cut(s) 421, 1573, 2435
BalI TGGCCA 2 cut(s) 809, 1402
BamHI GGATCC 1 cut(s) 331
BanII GRGCYC 1 cut(s) 779
BauI CACGAG 1 cut(s) 2417
BbsI GAAGAC 2 cut(s) 1146, 1167
BbvI GCAGC 3 cut(s) 592, 621, 1507
BccI CCATC 5 cut(s) 459, 1349, 1564, 2059, 2384
BceAI ACGGC 1 cut(s) 569
BciT130I CCWGG 4 cut(s) 616, 2193, 2270, 2330
BciVI GTATCC 1 cut(s) 100
BclI TGATCA 2 cut(s) 753, 1245
BcoDI GTCTC 7 cut(s) 424, 836, 2052, 2312, 2317, 2464, 2469
BfaI CTAG 5 cut(s) 399, 864, 1577, 2055, 2208
BfmI CTRYAG 1 cut(s) 216
BfrI CTTAAG 1 cut(s) 1789
BfuI GTATCC 1 cut(s) 100
BglII AGATCT 2 cut(s) 1091, 1579
BisI GCNGC 4 cut(s) 581, 635, 861, 1521
BlsI GCNGC 4 cut(s) 582, 636, 862, 1522
BmcAI AGTACT 1 cut(s) 2200
Bme1390I CCNGG 4 cut(s) 616, 2193, 2270, 2330
Bme18I GGWCC 3 cut(s) 421, 1573, 2435
BmeRI GACNNNNNGTC 1 cut(s) 1571
BmeT110I CYCGRG 2 cut(s) 726, 2248
BmgBI CACGTC 1 cut(s) 2400
BmgT120I GGNCC 5 cut(s) 421, 612, 1573, 2272, 2435
BmiI GGNNCC 2 cut(s) 333, 2160
BmrFI CCNGG 4 cut(s) 616, 2193, 2270, 2330
BmrI ACTGGG 2 cut(s) 365, 1894
BmsI GCATC 8 cut(s) 21, 460, 1090, 1192, 1296, 1770, 1963, 2148
BmuI ACTGGG 2 cut(s) 365, 1894
BpiI GAAGAC 2 cut(s) 1146, 1167
BpmI CTGGAG 1 cut(s) 1478
Bpu14I TTCGAA 1 cut(s) 1158
BpuEI CTTGAG 5 cut(s) 988, 1108, 1154, 1727, 1757
BsaXI ACNNNNNCTCC 2 cut(s) 1000, 1030
Bse1I ACTGG 4 cut(s) 360, 424, 1593, 1889
BseBI CCWGG 4 cut(s) 616, 2193, 2270, 2330
BseGI GGATG 9 cut(s) 12, 148, 268, 470, 475, 1301, 1311, 1330, 1785
BseMII CTCAG 1 cut(s) 644
BseNI ACTGG 4 cut(s) 360, 424, 1593, 1889
BseRI GAGGAG 5 cut(s) 848, 851, 854, 1754, 1905
BseXI GCAGC 3 cut(s) 592, 621, 1507
BseYI CCCAGC 1 cut(s) 817
Bsh1236I CGCG 1 cut(s) 2404
BshFI GGCC 7 cut(s) 452, 556, 614, 809, 1402, 2246, 2274
BsiHKCI CYCGRG 2 cut(s) 726, 2248
BslFI GGGAC 2 cut(s) 314, 1895
BsmAI GTCTC 7 cut(s) 424, 836, 2052, 2312, 2317, 2464, 2469
BsmBI CGTCTC 2 cut(s) 2317, 2469
BsmFI GGGAC 2 cut(s) 314, 1895
BsmI GAATGC 2 cut(s) 1047, 1815
BsnI GGCC 7 cut(s) 452, 556, 614, 809, 1402, 2246, 2274
BsoBI CYCGRG 2 cut(s) 726, 2248
Bsp119I TTCGAA 1 cut(s) 1158
Bsp1286I GDGCHC 1 cut(s) 779
Bsp1407I TGTACA 1 cut(s) 1860
Bsp19I CCATGG 2 cut(s) 79, 288
BspACI CCGC 5 cut(s) 484, 861, 925, 1321, 1794
BspANI GGCC 7 cut(s) 452, 556, 614, 809, 1402, 2246, 2274
BspCNI CTCAG 1 cut(s) 643
BspFNI CGCG 1 cut(s) 2404
BspLI GGNNCC 2 cut(s) 333, 2160
BspPI GGATC 5 cut(s) 326, 339, 1528, 1608, 2260
BspQI GCTCTTC 1 cut(s) 850
BspT104I TTCGAA 1 cut(s) 1158
BspTI CTTAAG 1 cut(s) 1789
BsrGI TGTACA 1 cut(s) 1860
BsrI ACTGG 4 cut(s) 360, 424, 1593, 1889
BssSI CACGAG 1 cut(s) 2417
BssT1I CCWWGG 6 cut(s) 79, 251, 288, 1403, 2212, 2431
Bst2BI CACGAG 1 cut(s) 2417
Bst2UI CCWGG 4 cut(s) 616, 2193, 2270, 2330
Bst4CI ACNGT 4 cut(s) 658, 1860, 2122, 2203
Bst6I CTCTTC 2 cut(s) 850, 2071
BstAFI CTTAAG 1 cut(s) 1789
BstAUI TGTACA 1 cut(s) 1860
BstBI TTCGAA 1 cut(s) 1158
BstC8I GCNNGC 4 cut(s) 1045, 1463, 1937, 1985
BstDEI CTNAG 8 cut(s) 381, 630, 734, 910, 1583, 1715, 1775, 2111
BstDSI CCRYGG 3 cut(s) 79, 288, 551
BstF5I GGATG 9 cut(s) 12, 148, 268, 470, 475, 1301, 1311, 1330, 1785
BstFNI CGCG 1 cut(s) 2404
BstHHI GCGC 4 cut(s) 580, 719, 1417, 2406
BstMAI GTCTC 7 cut(s) 424, 836, 2052, 2312, 2317, 2464, 2469
BstMWI GCNNNNNNNGC 4 cut(s) 631, 767, 1044, 1529
BstNI CCWGG 4 cut(s) 616, 2193, 2270, 2330
BstNSI RCATGY 2 cut(s) 713, 1867
BstSCI CCNGG 4 cut(s) 614, 2191, 2268, 2328
BstSFI CTRYAG 1 cut(s) 216
BstUI CGCG 1 cut(s) 2404
BstV1I GCAGC 3 cut(s) 592, 621, 1507
BstV2I GAAGAC 2 cut(s) 1146, 1167
BstX2I RGATCY 3 cut(s) 331, 1091, 1579
BstXI CCANNNNNNTGG 2 cut(s) 817, 1477
BstYI RGATCY 3 cut(s) 331, 1091, 1579
BsuI GTATCC 1 cut(s) 100
BsuRI GGCC 7 cut(s) 452, 556, 614, 809, 1402, 2246, 2274
BtgI CCRYGG 3 cut(s) 79, 288, 551
BtrI CACGTC 1 cut(s) 2400
BtsCI GGATG 9 cut(s) 12, 148, 268, 470, 475, 1301, 1311, 1330, 1785
BtsI GCAGTG 1 cut(s) 1040
BtsIMutI CAGTG 3 cut(s) 41, 431, 1040
Cac8I GCNNGC 4 cut(s) 1045, 1463, 1937, 1985
CaiI CAGNNNCTG 1 cut(s) 637
CfoI GCGC 4 cut(s) 580, 719, 1417, 2406
Cfr13I GGNCC 5 cut(s) 421, 612, 1573, 2272, 2435
CsiI ACCWGGT 1 cut(s) 2328
Csp6I GTAC 4 cut(s) 344, 1284, 1861, 2199
CviQI GTAC 4 cut(s) 344, 1284, 1861, 2199
DdeI CTNAG 8 cut(s) 381, 630, 734, 910, 1583, 1715, 1775, 2111
DraI TTTAAA 1 cut(s) 441
DraIII CACNNNGTG 2 cut(s) 2332, 2419
DriI GACNNNNNGTC 1 cut(s) 1571
EaeI YGGCCR 3 cut(s) 450, 807, 1400
Eam1104I CTCTTC 2 cut(s) 850, 2071
Eam1105I GACNNNNNGTC 1 cut(s) 1571
EarI CTCTTC 2 cut(s) 850, 2071
EciI GGCGGA 1 cut(s) 940
Eco130I CCWWGG 6 cut(s) 79, 251, 288, 1403, 2212, 2431
Eco24I GRGCYC 1 cut(s) 779
Eco32I GATATC 1 cut(s) 1150
Eco47I GGWCC 3 cut(s) 421, 1573, 2435
Eco57I CTGAAG 3 cut(s) 1371, 1718, 2256
Eco88I CYCGRG 2 cut(s) 726, 2248
EcoO109I RGGNCCY 1 cut(s) 2435
EcoRI GAATTC 1 cut(s) 951
EcoRII CCWGG 4 cut(s) 614, 2191, 2268, 2328
EcoRV GATATC 1 cut(s) 1150
EcoT14I CCWWGG 6 cut(s) 79, 251, 288, 1403, 2212, 2431
EcoT22I ATGCAT 1 cut(s) 1311
EcoT38I GRGCYC 1 cut(s) 779
ErhI CCWWGG 6 cut(s) 79, 251, 288, 1403, 2212, 2431
Esp3I CGTCTC 2 cut(s) 2317, 2469
FalI AAGNNNNNCTT 2 cut(s) 1179, 1211
FaqI GGGAC 2 cut(s) 314, 1895
FauI CCCGC 2 cut(s) 1314, 1787
FbaI TGATCA 2 cut(s) 753, 1245
FblI GTMKAC 2 cut(s) 915, 1606
Fnu4HI GCNGC 4 cut(s) 581, 635, 861, 1521
FokI GGATG 8 cut(s) 155, 275, 477, 482, 1308, 1318, 1337, 1792
FriOI GRGCYC 1 cut(s) 779
Fsp4HI GCNGC 4 cut(s) 581, 635, 861, 1521
FspBI CTAG 5 cut(s) 399, 864, 1577, 2055, 2208
GlaI GCGC 4 cut(s) 579, 718, 1416, 2405
GluI GCNGC 4 cut(s) 581, 635, 861, 1521
GsaI CCCAGC 1 cut(s) 821
GsuI CTGGAG 1 cut(s) 1478
HaeIII GGCC 7 cut(s) 452, 556, 614, 809, 1402, 2246, 2274
HhaI GCGC 4 cut(s) 580, 719, 1417, 2406
Hin6I GCGC 4 cut(s) 578, 717, 1415, 2404
HinP1I GCGC 4 cut(s) 578, 717, 1415, 2404
HincII GTYRAC 3 cut(s) 916, 1767, 2151
HindII GTYRAC 3 cut(s) 916, 1767, 2151
HindIII AAGCTT 3 cut(s) 1260, 1463, 1958
HinfI GANTC 8 cut(s) 203, 306, 599, 1076, 1711, 2045, 2107, 2147
Hpy166II GTNNAC 5 cut(s) 916, 1607, 1767, 2151, 2222
Hpy188I TCNGA 9 cut(s) 490, 1069, 1096, 1351, 1640, 1972, 2317, 2469, 2483
Hpy188III TCNNGA 9 cut(s) 462, 1183, 1199, 1495, 1736, 1836, 2055, 2097, 2294
Hpy8I GTNNAC 5 cut(s) 916, 1607, 1767, 2151, 2222
Hpy99I CGWCG 1 cut(s) 2404
HpyAV CCTTC 9 cut(s) 160, 287, 345, 865, 1274, 1627, 2231, 2267, 2333
HpyCH4III ACNGT 4 cut(s) 658, 1860, 2122, 2203
HpyCH4IV ACGT 1 cut(s) 2399
HpyF10VI GCNNNNNNNGC 4 cut(s) 631, 767, 1044, 1529
HpyF3I CTNAG 8 cut(s) 381, 630, 734, 910, 1583, 1715, 1775, 2111
HpySE526I ACGT 1 cut(s) 2399
HspAI GCGC 4 cut(s) 578, 717, 1415, 2404
Ksp22I TGATCA 2 cut(s) 753, 1245
LguI GCTCTTC 1 cut(s) 850
LmnI GCTCC 2 cut(s) 1008, 2374
Lsp1109I GCAGC 3 cut(s) 592, 621, 1507
LweI GCATC 8 cut(s) 21, 460, 1090, 1192, 1296, 1770, 1963, 2148
MabI ACCWGGT 1 cut(s) 2328
MaeI CTAG 5 cut(s) 399, 864, 1577, 2055, 2208
MaeII ACGT 1 cut(s) 2399
MaeIII GTNAC 2 cut(s) 1799, 2230
MfeI CAATTG 3 cut(s) 195, 564, 2011
MflI RGATCY 3 cut(s) 331, 1091, 1579
MhlI GDGCHC 1 cut(s) 779
MlsI TGGCCA 2 cut(s) 809, 1402
MluNI TGGCCA 2 cut(s) 809, 1402
MlyI GAGTC 2 cut(s) 2101, 2156
MmeI TCCRAC 1 cut(s) 399
Mox20I TGGCCA 2 cut(s) 809, 1402
Mph1103I ATGCAT 1 cut(s) 1311
MscI TGGCCA 2 cut(s) 809, 1402
MseI TTAA 9 cut(s) 440, 504, 824, 1410, 1515, 1691, 1790, 1946, 2018
MslI CAYNNNNRTG 3 cut(s) 99, 122, 137
Msp20I TGGCCA 2 cut(s) 809, 1402
MspA1I CMGCKG 2 cut(s) 634, 817
MspCI CTTAAG 1 cut(s) 1789
MspR9I CCNGG 4 cut(s) 616, 2193, 2270, 2330
MunI CAATTG 3 cut(s) 195, 564, 2011
Mva1269I GAATGC 2 cut(s) 1047, 1815
MvaI CCWGG 4 cut(s) 616, 2193, 2270, 2330
MvnI CGCG 1 cut(s) 2404
MwoI GCNNNNNNNGC 4 cut(s) 631, 767, 1044, 1529
NcoI CCATGG 2 cut(s) 79, 288
NlaIV GGNNCC 2 cut(s) 333, 2160
NmuCI GTSAC 1 cut(s) 2230
NsiI ATGCAT 1 cut(s) 1311
NspI RCATGY 2 cut(s) 713, 1867
NspV TTCGAA 1 cut(s) 1158
PciI ACATGT 1 cut(s) 709
PciSI GCTCTTC 1 cut(s) 850
PcsI WCGNNNNNNNCGW 1 cut(s) 2142
PctI GAATGC 2 cut(s) 1047, 1815
PfeI GAWTC 6 cut(s) 203, 306, 599, 1076, 1711, 2045
PkrI GCNGC 4 cut(s) 582, 636, 862, 1522
PleI GAGTC 2 cut(s) 2101, 2155
PpsI GAGTC 2 cut(s) 2101, 2155
PpuMI RGGWCCY 1 cut(s) 2435
PscI ACATGT 1 cut(s) 709
Psp5II RGGWCCY 1 cut(s) 2435
Psp6I CCWGG 4 cut(s) 614, 2191, 2268, 2328
PspFI CCCAGC 1 cut(s) 817
PspGI CCWGG 4 cut(s) 614, 2191, 2268, 2328
PspN4I GGNNCC 2 cut(s) 333, 2160
PspPI GGNCC 5 cut(s) 421, 612, 1573, 2272, 2435
PspPPI RGGWCCY 1 cut(s) 2435
PstNI CAGNNNCTG 1 cut(s) 637
PsuI RGATCY 3 cut(s) 331, 1091, 1579
PvuII CAGCTG 2 cut(s) 634, 817
RsaI GTAC 4 cut(s) 345, 1285, 1862, 2200
RsaNI GTAC 4 cut(s) 344, 1284, 1861, 2199
RseI CAYNNNNRTG 3 cut(s) 99, 122, 137
SalI GTCGAC 1 cut(s) 914
SapI GCTCTTC 1 cut(s) 850
SaqAI TTAA 9 cut(s) 440, 504, 824, 1410, 1515, 1691, 1790, 1946, 2018
SatI GCNGC 4 cut(s) 581, 635, 861, 1521
Sau96I GGNCC 5 cut(s) 421, 612, 1573, 2272, 2435
ScaI AGTACT 1 cut(s) 2200
SchI GAGTC 2 cut(s) 2101, 2156
ScrFI CCNGG 4 cut(s) 616, 2193, 2270, 2330
SduI GDGCHC 1 cut(s) 779
SexAI ACCWGGT 1 cut(s) 2328
SfaNI GCATC 8 cut(s) 21, 460, 1090, 1192, 1296, 1770, 1963, 2148
SfcI CTRYAG 1 cut(s) 216
SfuI TTCGAA 1 cut(s) 1158
SinI GGWCC 3 cut(s) 421, 1573, 2435
SmiMI CAYNNNNRTG 3 cut(s) 99, 122, 137
SmlI CTYRAG 6 cut(s) 1003, 1087, 1169, 1706, 1736, 1789
SmoI CTYRAG 6 cut(s) 1003, 1087, 1169, 1706, 1736, 1789
SsiI CCGC 5 cut(s) 484, 861, 925, 1321, 1794
SspI AATATT 2 cut(s) 793, 1807
SspMI CTAG 5 cut(s) 399, 864, 1577, 2055, 2208
StyD4I CCNGG 4 cut(s) 614, 2191, 2268, 2328
StyI CCWWGG 6 cut(s) 79, 251, 288, 1403, 2212, 2431
TaaI ACNGT 4 cut(s) 658, 1860, 2122, 2203
TaiI ACGT 1 cut(s) 2402
TaqI TCGA 6 cut(s) 831, 915, 1158, 1337, 1785, 2025
TatI WGTACW 2 cut(s) 1860, 2198
TauI GCSGC 1 cut(s) 863
TfiI GAWTC 6 cut(s) 203, 306, 599, 1076, 1711, 2045
Tru1I TTAA 9 cut(s) 440, 504, 824, 1410, 1515, 1691, 1790, 1946, 2018
Tru9I TTAA 9 cut(s) 440, 504, 824, 1410, 1515, 1691, 1790, 1946, 2018
TscAI CASTG 3 cut(s) 41, 431, 1040
TseFI GTSAC 1 cut(s) 2230
TseI GCWGC 3 cut(s) 580, 634, 1520
Tsp45I GTSAC 1 cut(s) 2230
TspDTI ATGAA 8 cut(s) 120, 127, 279, 402, 663, 734, 1574, 1736
TspGWI ACGGA 1 cut(s) 2151
TspRI CASTG 3 cut(s) 41, 431, 1040
Vha464I CTTAAG 1 cut(s) 1789
VpaK11BI GGWCC 3 cut(s) 421, 1573, 2435
XapI RAATTY 9 cut(s) 394, 478, 518, 827, 951, 1237, 1364, 1455, 1727
XbaI TCTAGA 1 cut(s) 2054
XceI RCATGY 2 cut(s) 713, 1867
XcmI CCANNNNNNNNNTGG 1 cut(s) 2179
XmiI GTMKAC 2 cut(s) 915, 1606
XspI CTAG 5 cut(s) 399, 864, 1577, 2055, 2208
ZrmI AGTACT 1 cut(s) 2200
Zsp2I ATGCAT 1 cut(s) 1311
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.