Rmu_sc0000689.1_g000041

Disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000689.1
OG0000085
Physical Location & Seq
Forward (+)
173020 .. 178764
5745 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000689.1_g000041.1.cds

Sequence Viewer

Length: 3537 bp
atgaaatggagggacgccttgaacaaaatcagcagcatctttggctgggtatgtgggagttctgagccagaaggacagattgtccaacaaatcgcggaatttgtctgcagcaaacctattgaaattaagtcgacggaagatattgaaactcatggaacttttgttttcaatggccttgatcaacctaaaaggcgacctgtacatcacttccttgagctaaaatcagctcctcgttggaagtatgatgtgtttataaatttcaggggtgaggacacttgtaagggttttctgtcccatttactagctgaattgcaaaagaaaccagcacacatgaacacagtaaagaatgatgaaccacttccaaaagggcggaatatatcttcgtatctcctaaacgccatagaagaggtgaggtttgccattgttgttctttcgcaagactttgcttcttcatcatggtgcctagaggaactagcaaagatttttgaatgcatgggaaaccaaaatagaattctgccaatcttttatcatgtggatccctctgaggtgcgacatcaaagggggagttttggagatgccttcgctgtacatgaagaaagatttcgggataatcatgagaaggtcaggcggtggagacgtgttttatcaatggtagccaacatccctggatggacatcagaaaaatatgagtatgaaggagaacttatcaaagacgttgtgcaagctatgtgcagtagactagttcagtctacagagtcgacagaagattttgaagcaacaggagatgtcatggaccaaacttctccccagcctgacccagctcctgtgtggaagaatgatgtgctttcgggtttcgggatggaagacactcgcaggggttttgtagcccattcagaccatgaattgccaaacacaggactaagtaaaacattcaaggatgaagaccagcttgaaaaaggggtagccctcccctctgcatctctttcctcaactgaaccaagtcctcaaccagctgttgggcagaagaatgatgagtttttgggtttccggagaaatgacaatcataggggttttgtcacccattcaagtcatgaaatacaaaagaccagggtgactaagacattcaccgatgaagaacatcttgaaaaagggatagctgcgtctccgccttcatcagctgaacgagatcctcggccgaagtatgatgtgtttttgagttacaggggggaagacactcgtaggggttttatagcctatttatgccgtgaattgcaaaacaccggagtgatcaaaactttcaaggatgacgtgcaactagaaaaagggacagttattgcttcaaatctcctaacggcaatcgaagaatcaaggtttgcgatcattgtgttgtcaaaaaattatgcttcttcttcatggtgtttggatgaacttgcaaagattttccagtgcatgaaagataagaacacaattttcccaattttttatgaggtggaacccactgatgtacgatttcaaaaggaagagacaggttttggagaagctttcattaagcatgaagctagacaagacattgagaagatgaaccagtggagagctgctttaaaaggagtggctggaatctctgggtggcattcaaccaactatccgacggatatagaactaattgaagacattgtgaaacatttgtgggagaaagtacttgaagcacccaccggaaattttgaaacatttgaagcgacaaggcaagccatggatgaggtcatgaatgtattaaaagatgaacaagtcactgtccttggggtgcatggagtgggtggcgctggaaagacaacgatggtcaaacatgttagtgcagaagcccagaaacgtgggctttttgatcatgtgatcatggttgtcgtatccaaaaaccctgacttagaagaaattcatggcacattggcagaatcgctgggcttgaaggaggggatcatgagaggaaacagcatgcttataatcttggatgacatttgggagagttttgaactctcgagcattggaattcccaatcacaatgagcttcaaaggtgcaattctaaagttatactcaccacaaggaaaagcaatatatgccattctatggggtgccatgcccagatccctctcaatgttctatcggagggagattcatggaagttattcatgaagacgtcggggaagtcttttcatgaatctaccgtttcctatgatgaagcgagaaagatagctggagaatgcggtggtctcccaaaagcaataaaagcagctgcaaggtcacttggagataaatacatggacgaatggaatgaagcagttgaaacagcatttggagatgactgcttggacgaatggaatgaaacagctcatcctgtcaacttcaaagctgaggaagacgtatttcattcattggcaactgatgatgccaagtcatgcttcttgctatgctgcctattcccagaaaattatgatatcccaattgaagtgttgctcaggtatgggattggaataggtttgtttcaatatgatacaatgcaagaagccagagatagagcacattctgtggtcaagtacctcaaagcttctagattgcttttggacggtacaaagaagggatgcacaaggatgactgatgacattcgaaatctggccatgtccattatgcggtccgaagaaggtgatgggttcttagtaaaagctggttgtgaactagaggagtggccagaggcaggattttggcaaggaattactttccggctccgcaaaatctgggattggccaatggatgctcatgaaggctactcaataatctcactcatgaaaaacaagcttcataagcttcctgaatatttgagactacaaaatctggaagaaatcatttgtgtaaatctagaaggaatgaaatatgtatttagatctgatgaagggcttgatccagaaaatactttcttgaggaaattgagggaaatgagattgtctactctagacaaactagtaagcatatgtaatggtcctgctccgcatgcaatcttccataatctaaaagttttggcaatttgcaaatgcaaggaattgaaaaatctcttcacaataggtgtagctgaatgtctttctcagttggaagacctttccgtacagcagtgtcatagcttggacagagtcattgaagtaagcaatagcttgaacagcaagattaaacttccggcgttgaagaaattagctttgatagatcttccggtgctcacaaggttctgcactgaaagtgttactattgaaactgagtgcccttcattggaatacttgtacgtggagaagtgcctccagttttcatattctgcttacgacttcaacaagaaccaagtccacttcaatgatgaacaacatttgagttctctagtgaaaaggtttgtcataaatttcaactgtattcttttctattcttggttctttttttccttcctctttattccagccatcccaaatgtctttccagtcattttagaatcgtctatatccagttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC TIR

Protein Analysis

1178

Amino Acids

133.88

Weight (kDa)

5.52

Isoelectric Point (pI)

45.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000085)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g05721 FvH4_2g05721 FvH4_3g35820 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35920 FvH4_3g38670 FvH4_3g43650 FvH4_3g43650 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44070 FvH4_5g01271 FvH4_5g02970 FvH4_5g02970 FvH4_5g02970 FvH4_5g27640 FvH4_5g27640 FvH4_5g27640 FvH4_6g05393 FvH4_6g52372 FvH4_7g06680 FvH4_7g12671 FvH4_7g13640 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31510
malus_domestica MD09G1227900.v1.1 MD11G1019800.v1.1 MD11G1020500.v1.1
prunus_persica Prupe.1G542800_v2.0.a1 Prupe.1G542800_v2.0.a1
pyrus_communis pycom11g01460 pycom11g01490 pycom11g01530 pycom11g01570 pycom15g35490
rosa_chinensis RchiOBHm_Chr1g0353711 RchiOBHm_Chr3g0473211 RchiOBHm_Chr3g0473291 RchiOBHm_Chr3g0473341 RchiOBHm_Chr3g0473381 RchiOBHm_Chr3g0473391 RchiOBHm_Chr3g0473441 RchiOBHm_Chr3g0473481 RchiOBHm_Chr3g0473531 RchiOBHm_Chr3g0473561 RchiOBHm_Chr3g0473571 RchiOBHm_Chr3g0483491 RchiOBHm_Chr3g0488681 RchiOBHm_Chr5g0059311 RchiOBHm_Chr5g0061291 RchiOBHm_Chr5g0061301 RchiOBHm_Chr5g0061331 RchiOBHm_Chr5g0064081 RchiOBHm_Chr5g0064111 RchiOBHm_Chr5g0064151 RchiOBHm_Chr5g0064171 RchiOBHm_Chr5g0069721 RchiOBHm_Chr5g0069731 RchiOBHm_Chr5g0069741 RchiOBHm_Chr5g0078251 RchiOBHm_Chr5g0078301 RchiOBHm_Chr5g0079511 RchiOBHm_Chr5g0079791 RchiOBHm_Chr5g0079811 RchiOBHm_Chr5g0079861 RchiOBHm_Chr5g0079881 RchiOBHm_Chr5g0080241 RchiOBHm_Chr5g0080281 RchiOBHm_Chr5g0080371 RchiOBHm_Chr5g0080671 RchiOBHm_Chr6g0256601 RchiOBHm_Chr6g0274791 RchiOBHm_Chr7g0221971 RchiOBHm_Chr7g0221981
rosa_laevigata RLG00000002106 RLG00000013523 RLG00000014806 RLG00000024010 RLG00000035451 RLG00000035455 RLG00000035464 RLG00000035705 RLG00000036094 RLG00000036817 RLG00000036825 RLG00000036826 RLG00000036848
rosa_multiflora Rmu_co8200400.1_g000001 Rmu_co8473147.1_g000001 Rmu_sc0000394.1_g000030 Rmu_sc0000555.1_g000030 Rmu_sc0000595.1_g000002 Rmu_sc0000595.1_g000006 Rmu_sc0000595.1_g000029 Rmu_sc0000689.1_g000018 Rmu_sc0000689.1_g000032 Rmu_sc0000689.1_g000041 Rmu_sc0000738.1_g000025 Rmu_sc0000826.1_g000016 Rmu_sc0000908.1_g000016 Rmu_sc0000908.1_g000019 Rmu_sc0000908.1_g000021 Rmu_sc0001208.1_g000087 Rmu_sc0001639.1_g000004 Rmu_sc0002075.1_g000004 Rmu_sc0002075.1_g000009 Rmu_sc0002187.1_g000042 Rmu_sc0002187.1_g000043 Rmu_sc0002187.1_g000060 Rmu_sc0002513.1_g000025 Rmu_sc0002983.1_g000008 Rmu_sc0003012.1_g000004 Rmu_sc0003069.1_g000019 Rmu_sc0003069.1_g000020 Rmu_sc0003069.1_g000047 Rmu_sc0003069.1_g000051 Rmu_sc0003069.1_g000053 Rmu_sc0003131.1_g000014 Rmu_sc0003514.1_g000003 Rmu_sc0003547.1_g000006 Rmu_sc0003547.1_g000008 Rmu_sc0004325.1_g000021 Rmu_sc0004482.1_g000004 Rmu_sc0004482.1_g000022 Rmu_sc0005006.1_g000004 Rmu_sc0005006.1_g000009 Rmu_sc0005006.1_g000010 Rmu_sc0005194.1_g000002 Rmu_sc0005194.1_g000003 Rmu_sc0005834.1_g000002 Rmu_sc0005947.1_g000023 Rmu_sc0006792.1_g000026 Rmu_sc0007612.1_g000001 Rmu_sc0007793.1_g000024 Rmu_sc0007793.1_g000025 Rmu_sc0008050.1_g000015 Rmu_sc0008336.1_g000003 Rmu_sc0010248.1_g000002 Rmu_sc0011921.1_g000001 Rmu_sc0011921.1_g000006 Rmu_sc0012138.1_g000001 Rmu_sc0016164.1_g000015 Rmu_sc0018807.1_g000005 Rmu_sc0030948.1_g000001 Rmu_sc0042587.1_g000001 Rmu_ssc0000170.1_g000020 Rmu_ssc0000170.1_g000026 Rmu_ssc0000170.1_g000029
rosa_roxburghii Rroxscaffold_1G00003040 Rroxscaffold_1G00003080 Rroxscaffold_1G00003430 Rroxscaffold_1G00003490 Rroxscaffold_1G00011370 Rroxscaffold_1G00016780 Rroxscaffold_1G00019390 Rroxscaffold_1G00019400 Rroxscaffold_1G00019420 Rroxscaffold_1G00021170 Rroxscaffold_3G00237530 Rroxscaffold_3G00246470 Rroxscaffold_4G00301730 Rroxscaffold_4G00309300 Rroxscaffold_6G00398250 Rroxscaffold_6G00398270 Rroxscaffold_6G00398280 Rroxscaffold_6G00408070 Rroxscaffold_7G00193940 Rroxscaffold_7G00209570
rosa_rugosa Rorug01G0237100 Rorug03G0098200 Rorug03G0132200 Rorug03G0132400 Rorug03G0132500 Rorug03G0132500 Rorug03G0132500 Rorug03G0132700 Rorug03G0132800 Rorug03G0205900 Rorug03G0206100 Rorug03G0206100 Rorug03G0206300 Rorug03G0206400 Rorug03G0206400 Rorug03G0240700 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug05G0322400 Rorug05G0339300 Rorug05G0339500 Rorug05G0362200 Rorug05G0362300 Rorug05G0362400 Rorug05G0362600 Rorug05G0362700 Rorug05G0362800 Rorug05G0363100 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0459900 Rorug05G0464600 Rorug05G0465000 Rorug05G0465100 Rorug05G0465200 Rorug05G0466000 Rorug05G0466300 Rorug05G0466400 Rorug05G0466500 Rorug05G0466600 Rorug05G0466700 Rorug05G0466700 Rorug05G0466700 Rorug05G0466800 Rorug05G0466900 Rorug05G0468100 Rorug05G0562200 Rorug05G0562300 Rorug06G0084400 Rorug06G0084500 Rorug06G0084500 Rorug06G0084600 Rorug07G0136400 Rorug07G0204500 Rorug07G0204600 Rorug07G0221500
rosa_samantha Rh5CG438200 Rh5CG569900 Rh6AG080700 Rh7CG362800 Rh7DG275900 Rh7DG343100
rosa_wichuraiana Rw0G004790 Rw0G008160 Rw0G008170 Rw0G008200 Rw0G008210 Rw0G012980 Rw0G013670 Rw0G019920 Rw0G020380 Rw0G022790 Rw0G022800 Rw0G023350 Rw1G005530 Rw1G021740 Rw3G013910 Rw3G015980 Rw3G023020 Rw3G023030 Rw3G025580 Rw5G027180 Rw5G037760 Rw5G037770 Rw5G037780 Rw5G037790 Rw5G037810 Rw5G037820 Rw5G039500 Rw5G039520 Rw5G039530 Rw5G039540 Rw5G039550 Rw5G039570 Rw5G039580 Rw5G039610 Rw5G039630 Rw5G039660 Rw5G042590 Rw5G047840 Rw5G048170 Rw5G048400 Rw5G048470 Rw5G048540 Rw6G007030 Rw6G007080 Rw6G007460 Rw6G017430 Rw7G023150 Rw7G023260 Rw7G029260 Rw7G029270 Rw7G030950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 254, 1994
AatII GACGTC 1 cut(s) 2192
AccB1I GGYRCC 2 cut(s) 459, 2124
AccB7I CCANNNNNTGG 2 cut(s) 1016, 2119
AccI GTMKAC 5 cut(s) 131, 736, 749, 758, 2993
AccII CGCG 1 cut(s) 95
AccIII TCCGGA 1 cut(s) 1047
AciI CCGC 8 cut(s) 95, 370, 628, 1166, 2256, 2680, 2776, 3035
AclWI GGATC 6 cut(s) 530, 543, 1181, 1976, 2131, 2942
AcoI YGGCCR 4 cut(s) 1193, 2664, 2735, 2792
AcsI RAATTY 7 cut(s) 98, 256, 510, 1717, 1926, 2040, 3430
AcyI GRCGYC 2 cut(s) 15, 2189
AfaI GTAC 8 cut(s) 201, 588, 1506, 1698, 2588, 2620, 3150, 3320
AfiI CCNNNNNNNGG 6 cut(s) 914, 1016, 2119, 2679, 2744, 3307
AflIII ACRYGT 2 cut(s) 637, 1843
AhdI GACNNNNNGTC 1 cut(s) 80
AhlI ACTAGT 2 cut(s) 739, 3007
AjiI CACGTC 2 cut(s) 638, 1309
AjnI CCWGG 2 cut(s) 664, 1106
AjuI GAANNNNNNNTTGG 6 cut(s) 495, 527, 2328, 2360, 2435, 2467
AleI CACNNNNGTG 1 cut(s) 1283
Alw21I GWGCWC 2 cut(s) 2572, 3258
Alw26I GTCTC 5 cut(s) 628, 1167, 1517, 2267, 2863
AlwI GGATC 6 cut(s) 530, 543, 1181, 1976, 2131, 2942
AlwNI CAGNNNCTG 1 cut(s) 824
Ama87I CYCGRG 1 cut(s) 2029
Aor13HI TCCGGA 1 cut(s) 1047
AoxI GGCC 5 cut(s) 172, 1193, 2664, 2735, 2792
ApeKI GCWGC 7 cut(s) 33, 108, 1157, 1595, 2282, 2285, 2463
ApoI RAATTY 7 cut(s) 98, 256, 510, 1717, 1926, 2040, 3430
Asp700I GAANNNNTTC 4 cut(s) 357, 600, 1926, 2177
AspLEI GCGC 1 cut(s) 1820
AspS9I GGNCC 3 cut(s) 793, 2682, 3026
AsuHPI GGTGA 7 cut(s) 278, 421, 1069, 1117, 1123, 2080, 2705
AsuII TTCGAA 1 cut(s) 2656
AvaI CYCGRG 1 cut(s) 2029
AvaII GGWCC 3 cut(s) 793, 2682, 3026
BaeGI GKGCMC 1 cut(s) 3302
BalI TGGCCA 3 cut(s) 2666, 2737, 2794
BamHI GGATCC 1 cut(s) 535
BanI GGYRCC 2 cut(s) 459, 2124
BbsI GAAGAC 7 cut(s) 870, 948, 1236, 1674, 2192, 2415, 3144
Bbv12I GWGCWC 2 cut(s) 2572, 3258
BbvCI CCTCAGC 1 cut(s) 2403
BbvI GCAGC 7 cut(s) 45, 120, 1144, 1582, 2272, 2294, 2450
BccI CCATC 5 cut(s) 663, 853, 1828, 2690, 3497
BceAI ACGGC 2 cut(s) 1248, 1368
BciT130I CCWGG 2 cut(s) 666, 1108
BciVI GTATCC 1 cut(s) 1912
BclI TGATCA 4 cut(s) 178, 1287, 1879, 1887
BcoDI GTCTC 5 cut(s) 628, 1167, 1517, 2267, 2863
BcuI ACTAGT 2 cut(s) 739, 3007
BfmI CTRYAG 2 cut(s) 106, 750
BfoI RGCGCY 1 cut(s) 1821
BfuI GTATCC 1 cut(s) 1912
BglII AGATCT 2 cut(s) 2930, 3244
BisI GCNGC 7 cut(s) 34, 109, 1158, 1596, 2283, 2286, 2464
BlsI GCNGC 7 cut(s) 35, 110, 1159, 1597, 2284, 2287, 2465
BmcAI AGTACT 1 cut(s) 1698
Bme1390I CCNGG 2 cut(s) 666, 1108
Bme18I GGWCC 3 cut(s) 793, 2682, 3026
BmeRI GACNNNNNGTC 1 cut(s) 80
BmeT110I CYCGRG 1 cut(s) 2029
BmgBI CACGTC 2 cut(s) 638, 1309
BmgT120I GGNCC 3 cut(s) 793, 2682, 3026
BmiI GGNNCC 5 cut(s) 461, 537, 1494, 2126, 2774
BmrFI CCNGG 2 cut(s) 666, 1108
BmsI GCATC 6 cut(s) 45, 565, 986, 2428, 2621, 2791
BpiI GAAGAC 7 cut(s) 870, 948, 1236, 1674, 2192, 2415, 3144
BpmI CTGGAG 2 cut(s) 2268, 3320
Bpu10I CCTNAGC 2 cut(s) 2403, 2507
Bpu14I TTCGAA 1 cut(s) 2656
BpuEI CTTGAG 2 cut(s) 233, 2986
BsaAI YACGTR 1 cut(s) 3322
BsaBI GATNNNNATC 1 cut(s) 673
BsaHI GRCGYC 2 cut(s) 15, 2189
BsaI GGTCTC 1 cut(s) 2267
BsaJI CCNNGG 5 cut(s) 664, 1107, 1190, 1749, 1795
BsaWI WCCGGW 4 cut(s) 1047, 1280, 1712, 3250
Bsc4I CCNNNNNNNGG 6 cut(s) 914, 1016, 2119, 2679, 2744, 3307
Bse1I ACTGG 5 cut(s) 1444, 1585, 3337, 3506, 3531
Bse8I GATNNNNATC 1 cut(s) 673
BseAI TCCGGA 1 cut(s) 1047
BseBI CCWGG 2 cut(s) 666, 1108
BseDI CCNNGG 5 cut(s) 664, 1107, 1190, 1749, 1795
BseJI GATNNNNATC 1 cut(s) 673
BseLI CCNNNNNNNGG 6 cut(s) 914, 1016, 2119, 2679, 2744, 3307
BseMII CTCAG 6 cut(s) 54, 534, 2394, 2521, 3143, 3285
BseNI ACTGG 5 cut(s) 1444, 1585, 3337, 3506, 3531
BseRI GAGGAG 2 cut(s) 219, 2744
BseSI GKGCMC 1 cut(s) 3302
BseX3I CGGCCG 1 cut(s) 1193
BseXI GCAGC 7 cut(s) 45, 120, 1144, 1582, 2272, 2294, 2450
BseYI CCCAGC 4 cut(s) 45, 807, 817, 1951
BsgI GTGCAG 3 cut(s) 751, 1872, 3253
Bsh1236I CGCG 1 cut(s) 95
Bsh1285I CGRYCG 1 cut(s) 1196
BshFI GGCC 5 cut(s) 174, 1195, 2666, 2737, 2794
BshNI GGYRCC 2 cut(s) 459, 2124
BsiEI CGRYCG 1 cut(s) 1196
BsiHKAI GWGCWC 2 cut(s) 2572, 3258
BsiHKCI CYCGRG 1 cut(s) 2029
BsiSI CCGG 6 cut(s) 1048, 1281, 1713, 2770, 3218, 3251
BslFI GGGAC 3 cut(s) 26, 277, 1339
BslI CCNNNNNNNGG 6 cut(s) 914, 1016, 2119, 2679, 2744, 3307
BsmAI GTCTC 5 cut(s) 628, 1167, 1517, 2267, 2863
BsmBI CGTCTC 2 cut(s) 628, 1167
BsmFI GGGAC 3 cut(s) 26, 277, 1339
BsmI GAATGC 3 cut(s) 494, 1630, 2258
BsnI GGCC 5 cut(s) 174, 1195, 2666, 2737, 2794
Bso31I GGTCTC 1 cut(s) 2267
BsoBI CYCGRG 1 cut(s) 2029
Bsp119I TTCGAA 1 cut(s) 2656
Bsp1286I GDGCHC 3 cut(s) 2572, 3258, 3302
Bsp13I TCCGGA 1 cut(s) 1047
Bsp1407I TGTACA 2 cut(s) 199, 586
Bsp19I CCATGG 1 cut(s) 1749
BspACI CCGC 8 cut(s) 95, 370, 628, 1166, 2256, 2680, 2776, 3035
BspANI GGCC 5 cut(s) 174, 1195, 2666, 2737, 2794
BspCNI CTCAG 6 cut(s) 55, 535, 2395, 2520, 3142, 3286
BspEI TCCGGA 1 cut(s) 1047
BspFNI CGCG 1 cut(s) 95
BspHI TCATGA 8 cut(s) 613, 1090, 1761, 1971, 2181, 2206, 2806, 2832
BspLI GGNNCC 5 cut(s) 461, 537, 1494, 2126, 2774
BspMAI CTGCAG 1 cut(s) 110
BspPI GGATC 6 cut(s) 530, 543, 1181, 1976, 2131, 2942
BspT104I TTCGAA 1 cut(s) 2656
BspT107I GGYRCC 2 cut(s) 459, 2124
BspTNI GGTCTC 1 cut(s) 2267
BsrGI TGTACA 2 cut(s) 199, 586
BsrI ACTGG 5 cut(s) 1444, 1585, 3337, 3506, 3531
BssECI CCNNGG 5 cut(s) 664, 1107, 1190, 1749, 1795
BssNI GRCGYC 2 cut(s) 15, 2189
BssT1I CCWWGG 2 cut(s) 1749, 1795
Bst2UI CCWGG 2 cut(s) 666, 1108
Bst4CI ACNGT 6 cut(s) 340, 1330, 1792, 2218, 2618, 3440
Bst6I CTCTTC 3 cut(s) 399, 1515, 3104
BstACI GRCGYC 2 cut(s) 15, 2189
BstAPI GCANNNNNTGC 1 cut(s) 2109
BstAUI TGTACA 2 cut(s) 199, 586
BstBAI YACGTR 1 cut(s) 3322
BstBI TTCGAA 1 cut(s) 2656
BstC8I GCNNGC 4 cut(s) 723, 1746, 1988, 3039
BstDSI CCRYGG 1 cut(s) 1749
BstFNI CGCG 1 cut(s) 95
BstH2I RGCGCY 1 cut(s) 1821
BstHHI GCGC 1 cut(s) 1820
BstMAI GTCTC 5 cut(s) 628, 1167, 1517, 2267, 2863
BstMCI CGRYCG 1 cut(s) 1196
BstMWI GCNNNNNNNGC 6 cut(s) 42, 2109, 2279, 2851, 3038, 3201
BstNI CCWGG 2 cut(s) 666, 1108
BstNSI RCATGY 3 cut(s) 1847, 1990, 3041
BstSCI CCNGG 2 cut(s) 664, 1106
BstSFI CTRYAG 2 cut(s) 106, 750
BstSLI GKGCMC 1 cut(s) 3302
BstUI CGCG 1 cut(s) 95
BstV1I GCAGC 7 cut(s) 45, 120, 1144, 1582, 2272, 2294, 2450
BstV2I GAAGAC 7 cut(s) 870, 948, 1236, 1674, 2192, 2415, 3144
BstX2I RGATCY 5 cut(s) 535, 1186, 2136, 2930, 3244
BstXI CCANNNNNNTGG 1 cut(s) 1868
BstYI RGATCY 5 cut(s) 535, 1186, 2136, 2930, 3244
BstZI CGGCCG 1 cut(s) 1193
BsuI GTATCC 1 cut(s) 1912
BsuRI GGCC 5 cut(s) 174, 1195, 2666, 2737, 2794
BtgI CCRYGG 1 cut(s) 1749
BtrI CACGTC 2 cut(s) 638, 1309
BtsI GCAGTG 1 cut(s) 3161
BtsIMutI CAGTG 6 cut(s) 1451, 1497, 1592, 1788, 3161, 3270
Cac8I GCNNGC 4 cut(s) 723, 1746, 1988, 3039
CaiI CAGNNNCTG 1 cut(s) 824
CciI TCATGA 8 cut(s) 613, 1090, 1761, 1971, 2181, 2206, 2806, 2832
CfoI GCGC 1 cut(s) 1820
Cfr13I GGNCC 3 cut(s) 793, 2682, 3026
CpoI CGGWCCG 1 cut(s) 2682
CseI GACGC 2 cut(s) 23, 1149
Csp6I GTAC 8 cut(s) 200, 587, 1505, 1697, 2587, 2619, 3149, 3319
CspI CGGWCCG 1 cut(s) 2682
CviQI GTAC 8 cut(s) 200, 587, 1505, 1697, 2587, 2619, 3149, 3319
DraI TTTAAA 1 cut(s) 1602
DriI GACNNNNNGTC 1 cut(s) 80
EaeI YGGCCR 4 cut(s) 1193, 2664, 2735, 2792
EagI CGGCCG 1 cut(s) 1193
Eam1104I CTCTTC 3 cut(s) 399, 1515, 3104
Eam1105I GACNNNNNGTC 1 cut(s) 80
EarI CTCTTC 3 cut(s) 399, 1515, 3104
EciI GGCGGA 2 cut(s) 385, 1155
EclXI CGGCCG 1 cut(s) 1193
Eco130I CCWWGG 2 cut(s) 1749, 1795
Eco31I GGTCTC 1 cut(s) 2267
Eco32I GATATC 1 cut(s) 2488
Eco47I GGWCC 3 cut(s) 793, 2682, 3026
Eco52I CGGCCG 1 cut(s) 1193
Eco88I CYCGRG 1 cut(s) 2029
EcoRI GAATTC 2 cut(s) 510, 2040
EcoRII CCWGG 2 cut(s) 664, 1106
EcoRV GATATC 1 cut(s) 2488
EcoT14I CCWWGG 2 cut(s) 1749, 1795
EcoT22I ATGCAT 1 cut(s) 494
ErhI CCWWGG 2 cut(s) 1749, 1795
Esp3I CGTCTC 2 cut(s) 628, 1167
FalI AAGNNNNNCTT 8 cut(s) 687, 719, 933, 965, 1125, 1157, 2435, 2467
FaqI GGGAC 3 cut(s) 26, 277, 1339
FauNDI CATATG 1 cut(s) 3017
FbaI TGATCA 4 cut(s) 178, 1287, 1879, 1887
FblI GTMKAC 5 cut(s) 131, 736, 749, 758, 2993
Fnu4HI GCNGC 7 cut(s) 34, 109, 1158, 1596, 2283, 2286, 2464
Fsp4HI GCNGC 7 cut(s) 34, 109, 1158, 1596, 2283, 2286, 2464
GlaI GCGC 1 cut(s) 1819
GluI GCNGC 7 cut(s) 34, 109, 1158, 1596, 2283, 2286, 2464
GsaI CCCAGC 4 cut(s) 49, 811, 821, 1955
GsuI CTGGAG 2 cut(s) 2268, 3320
HaeII RGCGCY 1 cut(s) 1821
HaeIII GGCC 5 cut(s) 174, 1195, 2666, 2737, 2794
HapII CCGG 6 cut(s) 1048, 1281, 1713, 2770, 3218, 3251
HgaI GACGC 2 cut(s) 23, 1149
HhaI GCGC 1 cut(s) 1820
Hin1I GRCGYC 2 cut(s) 15, 2189
Hin6I GCGC 1 cut(s) 1818
HinP1I GCGC 1 cut(s) 1818
HincII GTYRAC 3 cut(s) 132, 759, 2392
HindII GTYRAC 3 cut(s) 132, 759, 2392
HindIII AAGCTT 4 cut(s) 1539, 2595, 2843, 2852
HinfI GANTC 8 cut(s) 755, 1364, 1617, 1946, 2165, 2210, 3174, 3518
HpaII CCGG 6 cut(s) 1048, 1281, 1713, 2770, 3218, 3251
HphI GGTGA 7 cut(s) 278, 421, 1069, 1117, 1123, 2080, 2705
Hpy166II GTNNAC 8 cut(s) 132, 737, 750, 759, 2392, 2723, 2994, 3379
Hpy188I TCNGA 8 cut(s) 64, 544, 679, 895, 1647, 2158, 2686, 2935
Hpy8I GTNNAC 8 cut(s) 132, 737, 750, 759, 2392, 2723, 2994, 3379
Hpy99I CGWCG 3 cut(s) 136, 1651, 2194
HpyCH4III ACNGT 6 cut(s) 340, 1330, 1792, 2218, 2618, 3440
HpyCH4IV ACGT 7 cut(s) 637, 714, 1308, 1867, 2189, 2412, 3321
HpyF10VI GCNNNNNNNGC 6 cut(s) 42, 2109, 2279, 2851, 3038, 3201
HpySE526I ACGT 7 cut(s) 637, 714, 1308, 1867, 2189, 2412, 3321
Hsp92I GRCGYC 2 cut(s) 15, 2189
HspAI GCGC 1 cut(s) 1818
Kpn2I TCCGGA 1 cut(s) 1047
Ksp22I TGATCA 4 cut(s) 178, 1287, 1879, 1887
LmnI GCTCC 4 cut(s) 232, 826, 2778, 3037
Lsp1109I GCAGC 7 cut(s) 45, 120, 1144, 1582, 2272, 2294, 2450
LweI GCATC 6 cut(s) 45, 565, 986, 2428, 2621, 2791
MaeII ACGT 7 cut(s) 637, 714, 1308, 1867, 2189, 2412, 3321
MaeIII GTNAC 6 cut(s) 1075, 1111, 1217, 1786, 2292, 3280
MfeI CAATTG 1 cut(s) 2493
MflI RGATCY 5 cut(s) 535, 1186, 2136, 2930, 3244
MhlI GDGCHC 3 cut(s) 2572, 3258, 3302
MlsI TGGCCA 3 cut(s) 2666, 2737, 2794
MluNI TGGCCA 3 cut(s) 2666, 2737, 2794
MlyI GAGTC 2 cut(s) 764, 3183
MmeI TCCRAC 4 cut(s) 109, 215, 1670, 3114
Mox20I TGGCCA 3 cut(s) 2666, 2737, 2794
Mph1103I ATGCAT 1 cut(s) 494
MroI TCCGGA 1 cut(s) 1047
MroXI GAANNNNTTC 4 cut(s) 357, 600, 1926, 2177
MscI TGGCCA 3 cut(s) 2666, 2737, 2794
MseI TTAA 5 cut(s) 126, 1548, 1601, 1772, 3210
MslI CAYNNNNRTG 5 cut(s) 457, 1283, 1848, 2639, 3384
Msp20I TGGCCA 3 cut(s) 2666, 2737, 2794
MspA1I CMGCKG 3 cut(s) 1013, 1178, 2285
MspI CCGG 6 cut(s) 1048, 1281, 1713, 2770, 3218, 3251
MspR9I CCNGG 2 cut(s) 666, 1108
MunI CAATTG 1 cut(s) 2493
Mva1269I GAATGC 3 cut(s) 494, 1630, 2258
MvaI CCWGG 2 cut(s) 666, 1108
MvnI CGCG 1 cut(s) 95
MwoI GCNNNNNNNGC 6 cut(s) 42, 2109, 2279, 2851, 3038, 3201
NcoI CCATGG 1 cut(s) 1749
NdeI CATATG 1 cut(s) 3017
NlaIV GGNNCC 5 cut(s) 461, 537, 1494, 2126, 2774
NmeAIII GCCGAG 1 cut(s) 1171
NmuCI GTSAC 4 cut(s) 1075, 1111, 1786, 2292
NsiI ATGCAT 1 cut(s) 494
NspI RCATGY 3 cut(s) 1847, 1990, 3041
NspV TTCGAA 1 cut(s) 2656
OliI CACNNNNGTG 1 cut(s) 1283
PaeI GCATGC 2 cut(s) 1990, 3041
PaeR7I CTCGAG 1 cut(s) 2029
PagI TCATGA 8 cut(s) 613, 1090, 1761, 1971, 2181, 2206, 2806, 2832
PciI ACATGT 1 cut(s) 1843
PctI GAATGC 3 cut(s) 494, 1630, 2258
PdmI GAANNNNTTC 4 cut(s) 357, 600, 1926, 2177
PfeI GAWTC 6 cut(s) 1364, 1617, 1946, 2165, 2210, 3518
PflFI GACNNNGTC 1 cut(s) 3173
PflMI CCANNNNNTGG 2 cut(s) 1016, 2119
PkrI GCNGC 7 cut(s) 35, 110, 1159, 1597, 2284, 2287, 2465
PleI GAGTC 2 cut(s) 763, 3182
PpsI GAGTC 2 cut(s) 763, 3182
Ppu21I YACGTR 1 cut(s) 3322
PscI ACATGT 1 cut(s) 1843
PsiI TTATAA 2 cut(s) 254, 1994
Psp6I CCWGG 2 cut(s) 664, 1106
PspFI CCCAGC 4 cut(s) 45, 807, 817, 1951
PspGI CCWGG 2 cut(s) 664, 1106
PspN4I GGNNCC 5 cut(s) 461, 537, 1494, 2126, 2774
PspPI GGNCC 3 cut(s) 793, 2682, 3026
PstI CTGCAG 1 cut(s) 110
PstNI CAGNNNCTG 1 cut(s) 824
PsuI RGATCY 5 cut(s) 535, 1186, 2136, 2930, 3244
PsyI GACNNNGTC 1 cut(s) 3173
PvuII CAGCTG 3 cut(s) 1013, 1178, 2285
RsaI GTAC 8 cut(s) 201, 588, 1506, 1698, 2588, 2620, 3150, 3320
RsaNI GTAC 8 cut(s) 200, 587, 1505, 1697, 2587, 2619, 3149, 3319
RseI CAYNNNNRTG 5 cut(s) 457, 1283, 1848, 2639, 3384
Rsr2I CGGWCCG 1 cut(s) 2682
RsrII CGGWCCG 1 cut(s) 2682
SalI GTCGAC 2 cut(s) 130, 757
SaqAI TTAA 5 cut(s) 126, 1548, 1601, 1772, 3210
SatI GCNGC 7 cut(s) 34, 109, 1158, 1596, 2283, 2286, 2464
Sau96I GGNCC 3 cut(s) 793, 2682, 3026
ScaI AGTACT 1 cut(s) 1698
SchI GAGTC 2 cut(s) 764, 3183
ScrFI CCNGG 2 cut(s) 666, 1108
SduI GDGCHC 3 cut(s) 2572, 3258, 3302
SfaNI GCATC 6 cut(s) 45, 565, 986, 2428, 2621, 2791
SfcI CTRYAG 2 cut(s) 106, 750
Sfr274I CTCGAG 1 cut(s) 2029
SfuI TTCGAA 1 cut(s) 2656
SinI GGWCC 3 cut(s) 793, 2682, 3026
SlaI CTCGAG 1 cut(s) 2029
SmiMI CAYNNNNRTG 5 cut(s) 457, 1283, 1848, 2639, 3384
SmlI CTYRAG 3 cut(s) 212, 2029, 2965
SmoI CTYRAG 3 cut(s) 212, 2029, 2965
SpeI ACTAGT 2 cut(s) 739, 3007
SphI GCATGC 2 cut(s) 1990, 3041
SsiI CCGC 8 cut(s) 95, 370, 628, 1166, 2256, 2680, 2776, 3035
SspI AATATT 1 cut(s) 2864
StyD4I CCNGG 2 cut(s) 664, 1106
StyI CCWWGG 2 cut(s) 1749, 1795
TaaI ACNGT 6 cut(s) 340, 1330, 1792, 2218, 2618, 3440
TaiI ACGT 7 cut(s) 640, 717, 1311, 1870, 2192, 2415, 3324
TaqI TCGA 5 cut(s) 131, 758, 1359, 2030, 2656
TatI WGTACW 3 cut(s) 199, 586, 1696
TfiI GAWTC 6 cut(s) 1364, 1617, 1946, 2165, 2210, 3518
Tru1I TTAA 5 cut(s) 126, 1548, 1601, 1772, 3210
Tru9I TTAA 5 cut(s) 126, 1548, 1601, 1772, 3210
TscAI CASTG 6 cut(s) 1451, 1504, 1592, 1795, 3161, 3277
TseFI GTSAC 4 cut(s) 1075, 1111, 1786, 2292
TseI GCWGC 7 cut(s) 33, 108, 1157, 1595, 2282, 2285, 2463
Tsp45I GTSAC 4 cut(s) 1075, 1111, 1786, 2292
TspGWI ACGGA 3 cut(s) 149, 1664, 3136
TspRI CASTG 6 cut(s) 1451, 1504, 1592, 1795, 3161, 3277
Tth111I GACNNNGTC 1 cut(s) 3173
Van91I CCANNNNNTGG 2 cut(s) 1016, 2119
VpaK11BI GGWCC 3 cut(s) 793, 2682, 3026
XapI RAATTY 7 cut(s) 98, 256, 510, 1717, 1926, 2040, 3430
XbaI TCTAGA 3 cut(s) 2600, 2905, 2998
XceI RCATGY 3 cut(s) 1847, 1990, 3041
XcmI CCANNNNNNNNNTGG 1 cut(s) 825
XhoI CTCGAG 1 cut(s) 2029
XmiI GTMKAC 5 cut(s) 131, 736, 749, 758, 2993
XmnI GAANNNNTTC 4 cut(s) 357, 600, 1926, 2177
ZraI GACGTC 1 cut(s) 2190
ZrmI AGTACT 1 cut(s) 1698
Zsp2I ATGCAT 1 cut(s) 494
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.