Rroxscaffold_1G00003490

Disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000085
Physical Location & Seq
Forward (+)
4314085 .. 4317642
3558 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00003490.1

Sequence Viewer

Length: 1239 bp
ATGGCATCGAGTGGCAACTTTGAAGCATTTGAAGCAACAAGACAAGCCATGATTGAGCTCATGAAGGCATTACAAACTGATGAGGTCACTGTTATTGGGGTCTATGGAATGGGAGGGGTTGGGAAGACAACCATGGTCAAACATGTTGGCACACATGCCCAAGAAAATGGTCTTTTTCATCATGTGATTATGGCTGTTGTATCCCAAAAACCTGACTTGAAAACAATCCAAGGCACACTTGCAGATCTGCTGGGCTTGAAACTGGAGGAGGAGTCAGAAATTGGACGAGCCAGTAGATTGCAGAGGGAGATACTTAAAAGAAATAAGATCTGTATAATCTTAGACGACATATGGGATAGAATAAATTTGTCAAGCATAGGAATTCCCAGTTACAATGAGCTTCAGATATGCAATTCCAAAGTCCTACTAACCACCAGGAGAGTGAATGTTTGTCATACCATGGAGAGCCAAGCAAACATTCATCTCAGTACCTTGTCAGAAGAAGATGCTTGGAACTTGTTTGTGAAGAAAGCAAGAAAGTCTTTTGAAAAATCCACTAATTTCTATGATGTAGCGAGAAAGGTAGCTGGAGAATGTGCTGGTCTCCCAATTGCGTTGATAGCAGTTGCGAGGGCACTTGGAGATAAAGATTTTGAAGAATGGAAAGAAGCAGCTCGACGCCTTGAGATGTCACAACGTGCCAACCTTGATCAGAAAGATGTGTTCAACTGTATAAAGTTAAGCTATGATTACTTGGATGGTAACGATGCCAAGTCTTGCTTCTTGCTTTGCTGCCTATTCCCAGAAGATTATGACATTCAATTGGAAGACTTGATGATATATGGGTTTGGAAAAGGATTGTTTCGAGATGTTAACAGCACAATAGAAAATGCCAGAGTCGTAGCAAATTCGGTTACTAAATACCTTAAAGCTTCCTGTTTGCTTTTGGATGGTACAAAGGATGGATGCGTAAGGATGCATGATGTCATTCGAGATGTGGCTATGTCAATTGCCTTGTCTGTAGATGGCCTTGCCTCTTTGGTAAAAACTCGCTGTGATTTAAAAGATTGGCCAATGGATGCACACGATGGCTACTCAGCAATCTCACTAATGGAGAGCAACATTTGCAAGGTTCCCAACAAGTTGGTATGTCCAAAACTTCAGATTTTATTGCTACAACGAAATGCTGATATAAGAAAGATCCCAAAAAACTTTTTTTCAAAAAACCCAATGATTTAA

Protein Analysis

412

Amino Acids

46.11

Weight (kDa)

6.72

Isoelectric Point (pI)

39.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 17 - 179 2.6e-31 NB-ARC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000085)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g05721 FvH4_2g05721 FvH4_3g35820 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35920 FvH4_3g38670 FvH4_3g43650 FvH4_3g43650 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44070 FvH4_5g01271 FvH4_5g02970 FvH4_5g02970 FvH4_5g02970 FvH4_5g27640 FvH4_5g27640 FvH4_5g27640 FvH4_6g05393 FvH4_6g52372 FvH4_7g06680 FvH4_7g12671 FvH4_7g13640 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31510
malus_domestica MD09G1227900.v1.1 MD11G1019800.v1.1 MD11G1020500.v1.1
prunus_persica Prupe.1G542800_v2.0.a1 Prupe.1G542800_v2.0.a1
pyrus_communis pycom11g01460 pycom11g01490 pycom11g01530 pycom11g01570 pycom15g35490
rosa_chinensis RchiOBHm_Chr1g0353711 RchiOBHm_Chr3g0473211 RchiOBHm_Chr3g0473291 RchiOBHm_Chr3g0473341 RchiOBHm_Chr3g0473381 RchiOBHm_Chr3g0473391 RchiOBHm_Chr3g0473441 RchiOBHm_Chr3g0473481 RchiOBHm_Chr3g0473531 RchiOBHm_Chr3g0473561 RchiOBHm_Chr3g0473571 RchiOBHm_Chr3g0483491 RchiOBHm_Chr3g0488681 RchiOBHm_Chr5g0059311 RchiOBHm_Chr5g0061291 RchiOBHm_Chr5g0061301 RchiOBHm_Chr5g0061331 RchiOBHm_Chr5g0064081 RchiOBHm_Chr5g0064111 RchiOBHm_Chr5g0064151 RchiOBHm_Chr5g0064171 RchiOBHm_Chr5g0069721 RchiOBHm_Chr5g0069731 RchiOBHm_Chr5g0069741 RchiOBHm_Chr5g0078251 RchiOBHm_Chr5g0078301 RchiOBHm_Chr5g0079511 RchiOBHm_Chr5g0079791 RchiOBHm_Chr5g0079811 RchiOBHm_Chr5g0079861 RchiOBHm_Chr5g0079881 RchiOBHm_Chr5g0080241 RchiOBHm_Chr5g0080281 RchiOBHm_Chr5g0080371 RchiOBHm_Chr5g0080671 RchiOBHm_Chr6g0256601 RchiOBHm_Chr6g0274791 RchiOBHm_Chr7g0221971 RchiOBHm_Chr7g0221981
rosa_laevigata RLG00000002106 RLG00000013523 RLG00000014806 RLG00000024010 RLG00000035451 RLG00000035455 RLG00000035464 RLG00000035705 RLG00000036094 RLG00000036817 RLG00000036825 RLG00000036826 RLG00000036848
rosa_multiflora Rmu_co8200400.1_g000001 Rmu_co8473147.1_g000001 Rmu_sc0000394.1_g000030 Rmu_sc0000555.1_g000030 Rmu_sc0000595.1_g000002 Rmu_sc0000595.1_g000006 Rmu_sc0000595.1_g000029 Rmu_sc0000689.1_g000018 Rmu_sc0000689.1_g000032 Rmu_sc0000689.1_g000041 Rmu_sc0000738.1_g000025 Rmu_sc0000826.1_g000016 Rmu_sc0000908.1_g000016 Rmu_sc0000908.1_g000019 Rmu_sc0000908.1_g000021 Rmu_sc0001208.1_g000087 Rmu_sc0001639.1_g000004 Rmu_sc0002075.1_g000004 Rmu_sc0002075.1_g000009 Rmu_sc0002187.1_g000042 Rmu_sc0002187.1_g000043 Rmu_sc0002187.1_g000060 Rmu_sc0002513.1_g000025 Rmu_sc0002983.1_g000008 Rmu_sc0003012.1_g000004 Rmu_sc0003069.1_g000019 Rmu_sc0003069.1_g000020 Rmu_sc0003069.1_g000047 Rmu_sc0003069.1_g000051 Rmu_sc0003069.1_g000053 Rmu_sc0003131.1_g000014 Rmu_sc0003514.1_g000003 Rmu_sc0003547.1_g000006 Rmu_sc0003547.1_g000008 Rmu_sc0004325.1_g000021 Rmu_sc0004482.1_g000004 Rmu_sc0004482.1_g000022 Rmu_sc0005006.1_g000004 Rmu_sc0005006.1_g000009 Rmu_sc0005006.1_g000010 Rmu_sc0005194.1_g000002 Rmu_sc0005194.1_g000003 Rmu_sc0005834.1_g000002 Rmu_sc0005947.1_g000023 Rmu_sc0006792.1_g000026 Rmu_sc0007612.1_g000001 Rmu_sc0007793.1_g000024 Rmu_sc0007793.1_g000025 Rmu_sc0008050.1_g000015 Rmu_sc0008336.1_g000003 Rmu_sc0010248.1_g000002 Rmu_sc0011921.1_g000001 Rmu_sc0011921.1_g000006 Rmu_sc0012138.1_g000001 Rmu_sc0016164.1_g000015 Rmu_sc0018807.1_g000005 Rmu_sc0030948.1_g000001 Rmu_sc0042587.1_g000001 Rmu_ssc0000170.1_g000020 Rmu_ssc0000170.1_g000026 Rmu_ssc0000170.1_g000029
rosa_roxburghii Rroxscaffold_1G00003040 Rroxscaffold_1G00003080 Rroxscaffold_1G00003430 Rroxscaffold_1G00003490 Rroxscaffold_1G00011370 Rroxscaffold_1G00016780 Rroxscaffold_1G00019390 Rroxscaffold_1G00019400 Rroxscaffold_1G00019420 Rroxscaffold_1G00021170 Rroxscaffold_3G00237530 Rroxscaffold_3G00246470 Rroxscaffold_4G00301730 Rroxscaffold_4G00309300 Rroxscaffold_6G00398250 Rroxscaffold_6G00398270 Rroxscaffold_6G00398280 Rroxscaffold_6G00408070 Rroxscaffold_7G00193940 Rroxscaffold_7G00209570
rosa_rugosa Rorug01G0237100 Rorug03G0098200 Rorug03G0132200 Rorug03G0132400 Rorug03G0132500 Rorug03G0132500 Rorug03G0132500 Rorug03G0132700 Rorug03G0132800 Rorug03G0205900 Rorug03G0206100 Rorug03G0206100 Rorug03G0206300 Rorug03G0206400 Rorug03G0206400 Rorug03G0240700 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug05G0322400 Rorug05G0339300 Rorug05G0339500 Rorug05G0362200 Rorug05G0362300 Rorug05G0362400 Rorug05G0362600 Rorug05G0362700 Rorug05G0362800 Rorug05G0363100 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0459900 Rorug05G0464600 Rorug05G0465000 Rorug05G0465100 Rorug05G0465200 Rorug05G0466000 Rorug05G0466300 Rorug05G0466400 Rorug05G0466500 Rorug05G0466600 Rorug05G0466700 Rorug05G0466700 Rorug05G0466700 Rorug05G0466800 Rorug05G0466900 Rorug05G0468100 Rorug05G0562200 Rorug05G0562300 Rorug06G0084400 Rorug06G0084500 Rorug06G0084500 Rorug06G0084600 Rorug07G0136400 Rorug07G0204500 Rorug07G0204600 Rorug07G0221500
rosa_samantha Rh5CG438200 Rh5CG569900 Rh6AG080700 Rh7CG362800 Rh7DG275900 Rh7DG343100
rosa_wichuraiana Rw0G004790 Rw0G008160 Rw0G008170 Rw0G008200 Rw0G008210 Rw0G012980 Rw0G013670 Rw0G019920 Rw0G020380 Rw0G022790 Rw0G022800 Rw0G023350 Rw1G005530 Rw1G021740 Rw3G013910 Rw3G015980 Rw3G023020 Rw3G023030 Rw3G025580 Rw5G027180 Rw5G037760 Rw5G037770 Rw5G037780 Rw5G037790 Rw5G037810 Rw5G037820 Rw5G039500 Rw5G039520 Rw5G039530 Rw5G039540 Rw5G039550 Rw5G039570 Rw5G039580 Rw5G039610 Rw5G039630 Rw5G039660 Rw5G042590 Rw5G047840 Rw5G048170 Rw5G048400 Rw5G048470 Rw5G048540 Rw6G007030 Rw6G007080 Rw6G007460 Rw6G017430 Rw7G023150 Rw7G023260 Rw7G029260 Rw7G029270 Rw7G030950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 1195
AcoI YGGCCR 1 cut(s) 1070
AcsI RAATTY 3 cut(s) 364, 381, 907
AcuI CTGAAG 2 cut(s) 386, 1145
AcyI GRCGYC 1 cut(s) 679
AdeI CACNNNGTG 1 cut(s) 698
AfaI GTAC 2 cut(s) 490, 955
AflIII ACRYGT 1 cut(s) 142
AgsI TTSAA 9 cut(s) 23, 32, 220, 259, 548, 656, 727, 821, 1221
AjnI CCWGG 1 cut(s) 434
AjuI GAANNNNNNNTTGG 4 cut(s) 462, 494, 764, 796
AluBI AGCT 6 cut(s) 58, 400, 587, 674, 744, 932
AluI AGCT 6 cut(s) 58, 400, 587, 674, 744, 932
Alw21I GWGCWC 1 cut(s) 60
Alw26I GTCTC 1 cut(s) 608
AlwI GGATC 1 cut(s) 1195
AoxI GGCC 2 cut(s) 1027, 1070
ApeKI GCWGC 2 cut(s) 671, 792
ApoI RAATTY 3 cut(s) 364, 381, 907
BaeGI GKGCMC 1 cut(s) 637
BalI TGGCCA 1 cut(s) 1072
BanII GRGCYC 1 cut(s) 60
BbsI GAAGAC 2 cut(s) 131, 834
Bbv12I GWGCWC 1 cut(s) 60
BbvI GCAGC 2 cut(s) 683, 779
BccI CCATC 5 cut(s) 752, 944, 956, 1019, 1082
BciT130I CCWGG 1 cut(s) 436
BciVI GTATCC 1 cut(s) 211
BclI TGATCA 1 cut(s) 709
BcoDI GTCTC 1 cut(s) 608
BfmI CTRYAG 1 cut(s) 1020
BfuI GTATCC 1 cut(s) 211
BglII AGATCT 2 cut(s) 244, 327
BisI GCNGC 2 cut(s) 672, 793
BlsI GCNGC 2 cut(s) 673, 794
Bme1390I CCNGG 1 cut(s) 436
BmiI GGNNCC 1 cut(s) 1134
BmrFI CCNGG 1 cut(s) 436
BmrI ACTGGG 1 cut(s) 381
BmsI GCATC 6 cut(s) 14, 496, 757, 956, 966, 1069
BmuI ACTGGG 1 cut(s) 381
BpiI GAAGAC 2 cut(s) 131, 834
BpmI CTGGAG 2 cut(s) 284, 609
BpuEI CTTGAG 1 cut(s) 704
BsaHI GRCGYC 1 cut(s) 679
BsaI GGTCTC 1 cut(s) 608
BsaJI CCNNGG 3 cut(s) 132, 229, 459
BsaXI ACNNNNNCTCC 2 cut(s) 257, 287
Bse1I ACTGG 3 cut(s) 267, 291, 387
BseBI CCWGG 1 cut(s) 436
BseDI CCNNGG 3 cut(s) 132, 229, 459
BseGI GGATG 6 cut(s) 763, 955, 967, 971, 981, 1084
BseMII CTCAG 2 cut(s) 499, 1110
BseNI ACTGG 3 cut(s) 267, 291, 387
BseRI GAGGAG 2 cut(s) 281, 284
BseSI GKGCMC 1 cut(s) 637
BseXI GCAGC 2 cut(s) 683, 779
BseYI CCCAGC 1 cut(s) 250
BshFI GGCC 2 cut(s) 1029, 1072
BsiHKAI GWGCWC 1 cut(s) 60
BsmAI GTCTC 1 cut(s) 608
BsnI GGCC 2 cut(s) 1029, 1072
Bso31I GGTCTC 1 cut(s) 608
Bsp1286I GDGCHC 2 cut(s) 60, 637
Bsp143I GATC 4 cut(s) 244, 327, 709, 1200
Bsp19I CCATGG 2 cut(s) 132, 459
BspANI GGCC 2 cut(s) 1029, 1072
BspCNI CTCAG 2 cut(s) 498, 1109
BspHI TCATGA 1 cut(s) 60
BspLI GGNNCC 1 cut(s) 1134
BspPI GGATC 1 cut(s) 1195
BspTNI GGTCTC 1 cut(s) 608
BsrI ACTGG 3 cut(s) 267, 291, 387
BssECI CCNNGG 3 cut(s) 132, 229, 459
BssMI GATC 4 cut(s) 244, 327, 709, 1200
BssNI GRCGYC 1 cut(s) 679
BssT1I CCWWGG 3 cut(s) 132, 229, 459
Bst2UI CCWGG 1 cut(s) 436
Bst4CI ACNGT 2 cut(s) 91, 731
BstACI GRCGYC 1 cut(s) 679
BstAPI GCANNNNNTGC 1 cut(s) 1125
BstDEI CTNAG 3 cut(s) 340, 485, 1096
BstDSI CCRYGG 2 cut(s) 132, 459
BstF5I GGATG 6 cut(s) 763, 955, 967, 971, 981, 1084
BstKTI GATC 4 cut(s) 247, 330, 712, 1203
BstMAI GTCTC 1 cut(s) 608
BstMBI GATC 4 cut(s) 244, 327, 709, 1200
BstMWI GCNNNNNNNGC 3 cut(s) 32, 620, 1125
BstNI CCWGG 1 cut(s) 436
BstNSI RCATGY 2 cut(s) 146, 158
BstSCI CCNGG 1 cut(s) 434
BstSFI CTRYAG 1 cut(s) 1020
BstSLI GKGCMC 1 cut(s) 637
BstV1I GCAGC 2 cut(s) 683, 779
BstV2I GAAGAC 2 cut(s) 131, 834
BstX2I RGATCY 3 cut(s) 244, 327, 1200
BstXI CCANNNNNNTGG 2 cut(s) 167, 1144
BstYI RGATCY 3 cut(s) 244, 327, 1200
BsuI GTATCC 1 cut(s) 211
BsuRI GGCC 2 cut(s) 1029, 1072
BtgI CCRYGG 2 cut(s) 132, 459
BtsCI GGATG 6 cut(s) 763, 955, 967, 971, 981, 1084
BtsIMutI CAGTG 1 cut(s) 87
CciI TCATGA 1 cut(s) 60
CseI GACGC 1 cut(s) 687
Csp6I GTAC 2 cut(s) 489, 954
CviAII CATG 8 cut(s) 49, 61, 133, 143, 155, 182, 460, 980
CviQI GTAC 2 cut(s) 489, 954
DdeI CTNAG 3 cut(s) 340, 485, 1096
DpnI GATC 4 cut(s) 246, 329, 711, 1202
DpnII GATC 4 cut(s) 244, 327, 709, 1200
DraI TTTAAA 1 cut(s) 1062
DraIII CACNNNGTG 1 cut(s) 698
EaeI YGGCCR 1 cut(s) 1070
Ecl136II GAGCTC 1 cut(s) 58
Eco130I CCWWGG 3 cut(s) 132, 229, 459
Eco24I GRGCYC 1 cut(s) 60
Eco31I GGTCTC 1 cut(s) 608
Eco53kI GAGCTC 1 cut(s) 58
Eco57I CTGAAG 2 cut(s) 386, 1145
EcoICRI GAGCTC 1 cut(s) 58
EcoRI GAATTC 1 cut(s) 381
EcoRII CCWGG 1 cut(s) 434
EcoT14I CCWWGG 3 cut(s) 132, 229, 459
EcoT22I ATGCAT 1 cut(s) 981
EcoT38I GRGCYC 1 cut(s) 60
ErhI CCWWGG 3 cut(s) 132, 229, 459
FaeI CATG 8 cut(s) 52, 64, 136, 146, 158, 185, 463, 983
FalI AAGNNNNNCTT 6 cut(s) 222, 254, 526, 558, 764, 796
FatI CATG 8 cut(s) 48, 60, 132, 142, 154, 181, 459, 979
FauNDI CATATG 1 cut(s) 350
FbaI TGATCA 1 cut(s) 709
Fnu4HI GCNGC 2 cut(s) 672, 793
FokI GGATG 6 cut(s) 770, 962, 974, 978, 988, 1091
FriOI GRGCYC 1 cut(s) 60
Fsp4HI GCNGC 2 cut(s) 672, 793
GluI GCNGC 2 cut(s) 672, 793
GsaI CCCAGC 1 cut(s) 254
GsuI CTGGAG 2 cut(s) 284, 609
HaeIII GGCC 2 cut(s) 1029, 1072
HgaI GACGC 1 cut(s) 687
Hin1I GRCGYC 1 cut(s) 679
Hin1II CATG 8 cut(s) 52, 64, 136, 146, 158, 185, 463, 983
HincII GTYRAC 1 cut(s) 874
HindII GTYRAC 1 cut(s) 874
HindIII AAGCTT 1 cut(s) 930
HinfI GANTC 2 cut(s) 272, 897
HpaI GTTAAC 1 cut(s) 874
Hpy166II GTNNAC 1 cut(s) 874
Hpy188I TCNGA 5 cut(s) 277, 405, 499, 714, 1164
Hpy188III TCNNGA 3 cut(s) 61, 866, 992
Hpy8I GTNNAC 1 cut(s) 874
Hpy99I CGWCG 1 cut(s) 681
HpyAV CCTTC 1 cut(s) 58
HpyCH4III ACNGT 2 cut(s) 91, 731
HpyCH4IV ACGT 1 cut(s) 697
HpyCH4V TGCA 6 cut(s) 242, 301, 411, 979, 1082, 1128
HpyF10VI GCNNNNNNNGC 3 cut(s) 32, 620, 1125
HpyF3I CTNAG 3 cut(s) 340, 485, 1096
HpySE526I ACGT 1 cut(s) 697
Hsp92I GRCGYC 1 cut(s) 679
Hsp92II CATG 8 cut(s) 52, 64, 136, 146, 158, 185, 463, 983
Ksp22I TGATCA 1 cut(s) 709
KspAI GTTAAC 1 cut(s) 874
Kzo9I GATC 4 cut(s) 244, 327, 709, 1200
Lsp1109I GCAGC 2 cut(s) 683, 779
LweI GCATC 6 cut(s) 14, 496, 757, 956, 966, 1069
MaeII ACGT 1 cut(s) 697
MaeIII GTNAC 5 cut(s) 85, 389, 690, 761, 913
MalI GATC 4 cut(s) 246, 329, 711, 1202
MboI GATC 4 cut(s) 244, 327, 709, 1200
MboII GAAGA 7 cut(s) 136, 512, 515, 538, 668, 818, 839
MfeI CAATTG 3 cut(s) 609, 821, 1008
MflI RGATCY 3 cut(s) 244, 327, 1200
MhlI GDGCHC 2 cut(s) 60, 637
MlsI TGGCCA 1 cut(s) 1072
MluCI AATT 9 cut(s) 279, 364, 381, 412, 559, 609, 821, 907, 1008
MluNI TGGCCA 1 cut(s) 1072
MlyI GAGTC 2 cut(s) 281, 906
MnlI CCTC 7 cut(s) 76, 107, 259, 262, 297, 624, 1045
Mox20I TGGCCA 1 cut(s) 1072
Mph1103I ATGCAT 1 cut(s) 981
MscI TGGCCA 1 cut(s) 1072
MseI TTAA 6 cut(s) 315, 740, 873, 927, 1061, 1237
Msp20I TGGCCA 1 cut(s) 1072
MspR9I CCNGG 1 cut(s) 436
MunI CAATTG 3 cut(s) 609, 821, 1008
MvaI CCWGG 1 cut(s) 436
MwoI GCNNNNNNNGC 3 cut(s) 32, 620, 1125
NcoI CCATGG 2 cut(s) 132, 459
NdeI CATATG 1 cut(s) 350
NdeII GATC 4 cut(s) 244, 327, 709, 1200
NlaIII CATG 8 cut(s) 52, 64, 136, 146, 158, 185, 463, 983
NlaIV GGNNCC 1 cut(s) 1134
NmuCI GTSAC 2 cut(s) 85, 690
NsiI ATGCAT 1 cut(s) 981
NspI RCATGY 2 cut(s) 146, 158
PagI TCATGA 1 cut(s) 60
PciI ACATGT 1 cut(s) 142
PkrI GCNGC 2 cut(s) 673, 794
PleI GAGTC 2 cut(s) 280, 905
PpsI GAGTC 2 cut(s) 280, 905
PscI ACATGT 1 cut(s) 142
Psp124BI GAGCTC 1 cut(s) 60
Psp6I CCWGG 1 cut(s) 434
PspFI CCCAGC 1 cut(s) 250
PspGI CCWGG 1 cut(s) 434
PspN4I GGNNCC 1 cut(s) 1134
PsuI RGATCY 3 cut(s) 244, 327, 1200
RsaI GTAC 2 cut(s) 490, 955
RsaNI GTAC 2 cut(s) 489, 954
SacI GAGCTC 1 cut(s) 60
SaqAI TTAA 6 cut(s) 315, 740, 873, 927, 1061, 1237
SatI GCNGC 2 cut(s) 672, 793
Sau3AI GATC 4 cut(s) 244, 327, 709, 1200
SchI GAGTC 2 cut(s) 281, 906
ScrFI CCNGG 1 cut(s) 436
SduI GDGCHC 2 cut(s) 60, 637
SfaNI GCATC 6 cut(s) 14, 496, 757, 956, 966, 1069
SfcI CTRYAG 1 cut(s) 1020
SmlI CTYRAG 1 cut(s) 683
SmoI CTYRAG 1 cut(s) 683
Sse9I AATT 9 cut(s) 279, 364, 381, 412, 559, 609, 821, 907, 1008
SstI GAGCTC 1 cut(s) 60
StyD4I CCNGG 1 cut(s) 434
StyI CCWWGG 3 cut(s) 132, 229, 459
TaaI ACNGT 2 cut(s) 91, 731
TaiI ACGT 1 cut(s) 700
TaqI TCGA 4 cut(s) 8, 676, 865, 991
TasI AATT 9 cut(s) 279, 364, 381, 412, 559, 609, 821, 907, 1008
Tru1I TTAA 6 cut(s) 315, 740, 873, 927, 1061, 1237
Tru9I TTAA 6 cut(s) 315, 740, 873, 927, 1061, 1237
TscAI CASTG 1 cut(s) 94
TseFI GTSAC 2 cut(s) 85, 690
TseI GCWGC 2 cut(s) 671, 792
Tsp45I GTSAC 2 cut(s) 85, 690
TspDTI ATGAA 3 cut(s) 77, 167, 470
TspRI CASTG 1 cut(s) 94
XapI RAATTY 3 cut(s) 364, 381, 907
XceI RCATGY 2 cut(s) 146, 158
Zsp2I ATGCAT 1 cut(s) 981
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.