Rmu_sc0004482.1_g000004

Disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004482.1
OG0000085
Physical Location & Seq
Reverse (-)
12503 .. 19326
6824 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004482.1_g000004.1.cds

Sequence Viewer

Length: 4986 bp
atggccttggaatccccaacggcctctgcatcatttcctacatcagttgaatcatcggctcctcggtggaagtatgaggtgtttttgagtttcaggagtgaagacactcggcggggttttacttcttatttgtacaatgaattgcaaaacagagaaatcaagacattcatggatatcgacggaactagtttggatagaggagaggggatttctcaaagtatcctagaggccattcaagaatcaagatttgcaatcgttgttctctcccaaaattatgcttcttccagttggtgtttggatgaactcacacagattatgcagtgcatggaaaataaggaaacaattctgccagttttctatcacgtggatccctctgaagtgcgctctcaaaggggggtgtgcggagcggccttggctgcacatgaagagcggtttaaagatcaaaaagagaggctgatgaaatggagggacgccttgaacaaaatcagcagcatctttggctgggtatgtgggagttctgagccagaaggacacgttgtccaacaaatcgcggaatttgtctgcagcaaacctattgaaattaagtcgacggaagatattgaaactcatggaacttctcctcgttggaagtatgatgtgtttataaatttcaggggtgaggacacttgtaagggttttctgtcccatttactagctgaattgcaaaagaaaccagcacacctgaacacagtaaagaatgatgaaccacttcgaaaagggcggaatatatcttcgtatctcctaaacgccatagaagaggtgaggtttgccattgttgttctttcgcaagactttgcttcttcatcatggtgcctagaggaactagcaaagatttttgaatgcatgggaaaccaaaatagaattctgccaatcttttatcatgtggatccctctgaggtgcgacatcaaagggggagttttggagatgccttcgctgtacatgaagaaagatttcgggataatcatgagaaggtcaggcggtggagacgtgttttatcaatggtagccaacatccctggatggacatcagaaaaatatgagtatgaaggagaacttatcaaagacgttgtgcaagctatgtgcagtagactagttcagtctacagagtcgacagaagattttgaagcaacaggagatgtcatggaccaaacttctccccagcctgacccagctcctgtgtggaagaatgatgtgctttcgggtttcgggatggaagacactcgcaggggttttgtagcccattcagaccatgaattgccaaacacaggactaagtaaaacattcaaggatgaagaccagcttgaaaaaggggtagccctcccctctgcatctctttcctcaactgaaccaagtcctcaaccagctgttgggcagaagaatgatgagtttttgggtttccggagaaatgacaatcataggggttttgtcacccattcaagtcatgaaatacaaaagaccagggtgactaagacattcaccgatgaagaacatcttgaaaaagggatagctgcgtctccgccttcatcagctgaacgagatcctcggccgaagtatgatgtgtttttgagttacaggggggaagacactcgtaggggttttatagcctatttatgccgtgaattgcaaaacaccggagtgatcaaaactttcaaggatgacgtgcaactagaaaaagggacagttattgcttcaaatctcctaacggcaatcgaagaatcaaggtttgcgatcattgtgttgtcaaaaaattatgcttcttcttcatggtgtttggatgaacttgcaaagattttccagtgcatgaaagataagaacacaattttcccaattttttatgaggtggaacccactgatgtacgatttcaaaaggaagagacaggttttggagaagctttcattaagcatgaagctagacaagacattgagaagatgaaccagtggagagctgctttaaaaggagtggctggaatctctgggtggcattcaaccaactatccgacggatatagaactaattgaagacattgtgaaacatttgtgggagaaagtacttgaagcacccaccggaaattttgaaacatttgaagcgacaaggcaagccatggatgaggtcatgaatgtattaaaagatgaacaagtcactgtccttggggtgcatggagtgggtggcgctggaaagacaacgatggtcaaacatgttagtgcagaagcccagaaacgtgggctttttgatcatgtgatcatggttgtcgtatccaaaaaccctgacttagaagaaattcatggcacattggcagaatcgctgggcttgaaggaggggatcatgagaggaaacagcatgcttataatcttggatgacatttgggagagttttgaactctcgagcattggaattcccaatcacaatgagcttcaaaggtgcaattctaaagttatactcaccacaaggaaaagcaatatatgccattctatggggtgccatgcccagatccctctcaatgttctatcggagggagattcatggaagttattcatgaagacgtcggggaagtcttttcatgaatctaccgtttcctatgatgaagcgagaaagatagctggagaatgcggtggtctcccaaaagcaataaaagcagctgcaaggtcacttggagataaatacatggacgaatggaatgaagcagttgaaacagcatttggagatgactgcttggacgaatggaatgaaacagctcatcctgtcaacttcaaagctgaggaagacgtatttcattcattggcaactgatgatgccaagtcatgcttcttgctatgctgcctattcccagaaaattatgatatcccaattgaagtgttgctcaggtatgggattggaataggtttgtttcaatatgatacaatgcaagaagccagagatagagcacattctgtggtcaagtacctcaaagcttctagattgcttttggacggtacaaagaagggatgcacaaggatgactgatgacattcgaaatctggccatgtccattatgcggtccgaagaaggtgatgggttcttagtaaaagctggttgtgaactagaggagtggccagaggcaggattttggcaaggattttgcttagcaacttctatgtcacttgtggctaacaatttcgcacccccaggaattacttcccggctccgcaaaatctgggattggccaatggatgctcatgaaggctactcaataatctcactcatgaaaaacaagcttcataagcttcctgaatatttggtatgttcagagctccaaattttattgttacaaagtaatgctggtatacgtgatatcccagaaacctttcttcaaagtcctaatgcgctaagggtctttgatcttagcttcactagcatttcatcactaccttcatcattcagtttcctaaccaaccttcaagttttgaatttggatttttgccataatttaagtaacatatccgttctaggaaaacttaagaaacttaagattcttagtatgagagaatttcctcttaagaaattcccaaaacaaataggagatttgaccagtctaaggatgttggacgtcactggtagatatcttaaaactatcccatctaaagtcatctcgaggttgtatagattggaagaactgcacatgaaatttcagtttgggaagtggggaagtaaaattgaggatgcagttgaagaaaccaatgctgactttgatgagttgactggcttgttggatttaaacattttgggagtttacatatctgatgctgcatgcttgcctagaagtgttgagtacaagccgaattgggtagaatttgatatatgcatcagcagagatgccccttgcatgtcgctccctcaacatgatggtttttcaagaaccttgactcttgacacaacaatcaattgcttaccggattggtttatcagcgttgtgacagagaaagtggagaagctagagtacacagattgtgaagacttgaatgacatcgttgggcaatatgaccatggcagattacttgcactgaaatatctctctgtgaacgggcaccataagaacttgaaagagataatcaacacaatgacacgggtttcaaataaaccagtatttgagaacttagaacagttgcatctgtaccgcttatattccctcaaggagttatgtgttggtgagctaccacctgggtctctacgcaagctaaagttcttgaaagtgcaaacttgttgtagcttggtgaatgcacttttaccgtcaacattgttgcagagactacaaaatctggaagaaatcatttgtgtaaatctagtaggaatgaaatatgtgtttggatctgatgaagggcttgatccagaaaatactttcttgaggaaattgagggaaatgagattgtctactctagacaaactagtaagcatatgtaatggtcctgctccgtgtgcaatcttccagaatcttaaagttttggcaatttgcgagtgcaaggaattgaaaaatctcttcacagtagatgtggctgaatgtctttttcagttggaagacctttccatagagtgctgtcgtagcttggacagagtcattgaagcaagcaatagcttgaacagcaagattaaacttccggcgttgaagaaattagctttgatagatcttccggtgctcacaaggttctgcactgaaagtgttactattgaaactgagtgcccttcattggaatacttgtacgtggagaagtgcctccagttttcatattctgcttacgacttcaacaagaaccaagtccacttcaatgatgaacaacatttgagttctctagtgaaaaggtttgtcataaatttcaactgtattcttttctattcttggttctttttttccttcctctttattccagccatcccaaatgtctttccagtcattttagaatcgtctatatccagttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC TIR

Protein Analysis

1661

Amino Acids

188.38

Weight (kDa)

5.41

Isoelectric Point (pI)

45.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000085)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g05721 FvH4_2g05721 FvH4_3g35820 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35920 FvH4_3g38670 FvH4_3g43650 FvH4_3g43650 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44070 FvH4_5g01271 FvH4_5g02970 FvH4_5g02970 FvH4_5g02970 FvH4_5g27640 FvH4_5g27640 FvH4_5g27640 FvH4_6g05393 FvH4_6g52372 FvH4_7g06680 FvH4_7g12671 FvH4_7g13640 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31510
malus_domestica MD09G1227900.v1.1 MD11G1019800.v1.1 MD11G1020500.v1.1
prunus_persica Prupe.1G542800_v2.0.a1 Prupe.1G542800_v2.0.a1
pyrus_communis pycom11g01460 pycom11g01490 pycom11g01530 pycom11g01570 pycom15g35490
rosa_chinensis RchiOBHm_Chr1g0353711 RchiOBHm_Chr3g0473211 RchiOBHm_Chr3g0473291 RchiOBHm_Chr3g0473341 RchiOBHm_Chr3g0473381 RchiOBHm_Chr3g0473391 RchiOBHm_Chr3g0473441 RchiOBHm_Chr3g0473481 RchiOBHm_Chr3g0473531 RchiOBHm_Chr3g0473561 RchiOBHm_Chr3g0473571 RchiOBHm_Chr3g0483491 RchiOBHm_Chr3g0488681 RchiOBHm_Chr5g0059311 RchiOBHm_Chr5g0061291 RchiOBHm_Chr5g0061301 RchiOBHm_Chr5g0061331 RchiOBHm_Chr5g0064081 RchiOBHm_Chr5g0064111 RchiOBHm_Chr5g0064151 RchiOBHm_Chr5g0064171 RchiOBHm_Chr5g0069721 RchiOBHm_Chr5g0069731 RchiOBHm_Chr5g0069741 RchiOBHm_Chr5g0078251 RchiOBHm_Chr5g0078301 RchiOBHm_Chr5g0079511 RchiOBHm_Chr5g0079791 RchiOBHm_Chr5g0079811 RchiOBHm_Chr5g0079861 RchiOBHm_Chr5g0079881 RchiOBHm_Chr5g0080241 RchiOBHm_Chr5g0080281 RchiOBHm_Chr5g0080371 RchiOBHm_Chr5g0080671 RchiOBHm_Chr6g0256601 RchiOBHm_Chr6g0274791 RchiOBHm_Chr7g0221971 RchiOBHm_Chr7g0221981
rosa_laevigata RLG00000002106 RLG00000013523 RLG00000014806 RLG00000024010 RLG00000035451 RLG00000035455 RLG00000035464 RLG00000035705 RLG00000036094 RLG00000036817 RLG00000036825 RLG00000036826 RLG00000036848
rosa_multiflora Rmu_co8200400.1_g000001 Rmu_co8473147.1_g000001 Rmu_sc0000394.1_g000030 Rmu_sc0000555.1_g000030 Rmu_sc0000595.1_g000002 Rmu_sc0000595.1_g000006 Rmu_sc0000595.1_g000029 Rmu_sc0000689.1_g000018 Rmu_sc0000689.1_g000032 Rmu_sc0000689.1_g000041 Rmu_sc0000738.1_g000025 Rmu_sc0000826.1_g000016 Rmu_sc0000908.1_g000016 Rmu_sc0000908.1_g000019 Rmu_sc0000908.1_g000021 Rmu_sc0001208.1_g000087 Rmu_sc0001639.1_g000004 Rmu_sc0002075.1_g000004 Rmu_sc0002075.1_g000009 Rmu_sc0002187.1_g000042 Rmu_sc0002187.1_g000043 Rmu_sc0002187.1_g000060 Rmu_sc0002513.1_g000025 Rmu_sc0002983.1_g000008 Rmu_sc0003012.1_g000004 Rmu_sc0003069.1_g000019 Rmu_sc0003069.1_g000020 Rmu_sc0003069.1_g000047 Rmu_sc0003069.1_g000051 Rmu_sc0003069.1_g000053 Rmu_sc0003131.1_g000014 Rmu_sc0003514.1_g000003 Rmu_sc0003547.1_g000006 Rmu_sc0003547.1_g000008 Rmu_sc0004325.1_g000021 Rmu_sc0004482.1_g000004 Rmu_sc0004482.1_g000022 Rmu_sc0005006.1_g000004 Rmu_sc0005006.1_g000009 Rmu_sc0005006.1_g000010 Rmu_sc0005194.1_g000002 Rmu_sc0005194.1_g000003 Rmu_sc0005834.1_g000002 Rmu_sc0005947.1_g000023 Rmu_sc0006792.1_g000026 Rmu_sc0007612.1_g000001 Rmu_sc0007793.1_g000024 Rmu_sc0007793.1_g000025 Rmu_sc0008050.1_g000015 Rmu_sc0008336.1_g000003 Rmu_sc0010248.1_g000002 Rmu_sc0011921.1_g000001 Rmu_sc0011921.1_g000006 Rmu_sc0012138.1_g000001 Rmu_sc0016164.1_g000015 Rmu_sc0018807.1_g000005 Rmu_sc0030948.1_g000001 Rmu_sc0042587.1_g000001 Rmu_ssc0000170.1_g000020 Rmu_ssc0000170.1_g000026 Rmu_ssc0000170.1_g000029
rosa_roxburghii Rroxscaffold_1G00003040 Rroxscaffold_1G00003080 Rroxscaffold_1G00003430 Rroxscaffold_1G00003490 Rroxscaffold_1G00011370 Rroxscaffold_1G00016780 Rroxscaffold_1G00019390 Rroxscaffold_1G00019400 Rroxscaffold_1G00019420 Rroxscaffold_1G00021170 Rroxscaffold_3G00237530 Rroxscaffold_3G00246470 Rroxscaffold_4G00301730 Rroxscaffold_4G00309300 Rroxscaffold_6G00398250 Rroxscaffold_6G00398270 Rroxscaffold_6G00398280 Rroxscaffold_6G00408070 Rroxscaffold_7G00193940 Rroxscaffold_7G00209570
rosa_rugosa Rorug01G0237100 Rorug03G0098200 Rorug03G0132200 Rorug03G0132400 Rorug03G0132500 Rorug03G0132500 Rorug03G0132500 Rorug03G0132700 Rorug03G0132800 Rorug03G0205900 Rorug03G0206100 Rorug03G0206100 Rorug03G0206300 Rorug03G0206400 Rorug03G0206400 Rorug03G0240700 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug05G0322400 Rorug05G0339300 Rorug05G0339500 Rorug05G0362200 Rorug05G0362300 Rorug05G0362400 Rorug05G0362600 Rorug05G0362700 Rorug05G0362800 Rorug05G0363100 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0459900 Rorug05G0464600 Rorug05G0465000 Rorug05G0465100 Rorug05G0465200 Rorug05G0466000 Rorug05G0466300 Rorug05G0466400 Rorug05G0466500 Rorug05G0466600 Rorug05G0466700 Rorug05G0466700 Rorug05G0466700 Rorug05G0466800 Rorug05G0466900 Rorug05G0468100 Rorug05G0562200 Rorug05G0562300 Rorug06G0084400 Rorug06G0084500 Rorug06G0084500 Rorug06G0084600 Rorug07G0136400 Rorug07G0204500 Rorug07G0204600 Rorug07G0221500
rosa_samantha Rh5CG438200 Rh5CG569900 Rh6AG080700 Rh7CG362800 Rh7DG275900 Rh7DG343100
rosa_wichuraiana Rw0G004790 Rw0G008160 Rw0G008170 Rw0G008200 Rw0G008210 Rw0G012980 Rw0G013670 Rw0G019920 Rw0G020380 Rw0G022790 Rw0G022800 Rw0G023350 Rw1G005530 Rw1G021740 Rw3G013910 Rw3G015980 Rw3G023020 Rw3G023030 Rw3G025580 Rw5G027180 Rw5G037760 Rw5G037770 Rw5G037780 Rw5G037790 Rw5G037810 Rw5G037820 Rw5G039500 Rw5G039520 Rw5G039530 Rw5G039540 Rw5G039550 Rw5G039570 Rw5G039580 Rw5G039610 Rw5G039630 Rw5G039660 Rw5G042590 Rw5G047840 Rw5G048170 Rw5G048400 Rw5G048470 Rw5G048540 Rw6G007030 Rw6G007080 Rw6G007460 Rw6G017430 Rw7G023150 Rw7G023260 Rw7G029260 Rw7G029270 Rw7G030950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 644, 2384
AatII GACGTC 2 cut(s) 2582, 3624
AccB1I GGYRCC 3 cut(s) 849, 2514, 4098
AccB7I CCANNNNNTGG 2 cut(s) 1406, 2509
AccBSI CCGCTC 2 cut(s) 407, 430
AccI GTMKAC 6 cut(s) 587, 1126, 1139, 1148, 3358, 4442
AccII CGCG 1 cut(s) 551
AccIII TCCGGA 1 cut(s) 1437
AclWI GGATC 9 cut(s) 362, 375, 920, 933, 1571, 2366, 2521, 4387, 4391
AcoI YGGCCR 4 cut(s) 1583, 3054, 3125, 3236
AcuI CTGAAG 1 cut(s) 396
AcvI CACGTG 1 cut(s) 364
AcyI GRCGYC 3 cut(s) 471, 2579, 3621
AfiI CCNNNNNNNGG 7 cut(s) 1304, 1406, 2509, 3069, 3134, 3609, 4756
AflII CTTAAG 3 cut(s) 3530, 3539, 3569
AflIII ACRYGT 3 cut(s) 532, 1027, 2233
AhdI GACNNNNNGTC 1 cut(s) 536
AhlI ACTAGT 3 cut(s) 185, 1129, 4456
AjiI CACGTC 2 cut(s) 1028, 1699
AjnI CCWGG 4 cut(s) 1054, 1496, 3199, 4231
AjuI GAANNNNNNNTTGG 6 cut(s) 885, 917, 2718, 2750, 2825, 2857
AleI CACNNNNGTG 1 cut(s) 1673
Alw21I GWGCWC 3 cut(s) 2962, 3327, 4707
Alw26I GTCTC 6 cut(s) 1018, 1557, 1907, 2657, 4242, 4312
AlwI GGATC 9 cut(s) 362, 375, 920, 933, 1571, 2366, 2521, 4387, 4391
AlwNI CAGNNNCTG 1 cut(s) 1214
Ama87I CYCGRG 2 cut(s) 2419, 3664
Aor13HI TCCGGA 1 cut(s) 1437
AoxI GGCC 8 cut(s) 3, 21, 228, 408, 1583, 3054, 3125, 3236
ApeKI GCWGC 9 cut(s) 416, 489, 564, 1547, 1985, 2672, 2675, 2853, 3818
Asp700I GAANNNNTTC 7 cut(s) 342, 747, 990, 2316, 2567, 3208, 3378
AspLEI GCGC 3 cut(s) 384, 2210, 3400
AspS9I GGNCC 3 cut(s) 1183, 3072, 4475
AsuC2I CCSGG 1 cut(s) 3214
AsuHPI GGTGA 9 cut(s) 668, 811, 1459, 1507, 1513, 2470, 3095, 4232, 4297
AsuII TTCGAA 2 cut(s) 751, 3046
AvaI CYCGRG 2 cut(s) 2419, 3664
AvaII GGWCC 3 cut(s) 1183, 3072, 4475
BaeGI GKGCMC 2 cut(s) 4101, 4751
BalI TGGCCA 3 cut(s) 3056, 3127, 3238
BamHI GGATCC 2 cut(s) 367, 925
BanI GGYRCC 3 cut(s) 849, 2514, 4098
BanII GRGCYC 1 cut(s) 3327
BarI GAAGNNNNNNTAC 2 cut(s) 3995, 4027
BbrPI CACGTG 1 cut(s) 364
BbsI GAAGAC 9 cut(s) 108, 1260, 1338, 1626, 2064, 2582, 2805, 4032, 4593
Bbv12I GWGCWC 3 cut(s) 2962, 3327, 4707
BbvCI CCTCAGC 1 cut(s) 2793
BbvI GCAGC 9 cut(s) 403, 501, 576, 1534, 1972, 2662, 2684, 2840, 3805
BccI CCATC 7 cut(s) 1053, 1243, 2218, 3080, 3658, 3911, 4946
BceAI ACGGC 3 cut(s) 36, 1638, 1758
BciT130I CCWGG 4 cut(s) 1056, 1498, 3201, 4233
BciVI GTATCC 2 cut(s) 230, 2302
BclI TGATCA 3 cut(s) 1677, 2269, 2277
BcnI CCSGG 1 cut(s) 3214
BcoDI GTCTC 6 cut(s) 1018, 1557, 1907, 2657, 4242, 4312
BcuI ACTAGT 3 cut(s) 185, 1129, 4456
BfmI CTRYAG 2 cut(s) 562, 1140
BfoI RGCGCY 1 cut(s) 2211
BfrI CTTAAG 3 cut(s) 3530, 3539, 3569
BfuI GTATCC 2 cut(s) 230, 2302
BglII AGATCT 1 cut(s) 4693
BlpI GCTNAGC 1 cut(s) 3157
BmcAI AGTACT 1 cut(s) 2088
Bme1390I CCNGG 5 cut(s) 1056, 1498, 3201, 3214, 4233
Bme18I GGWCC 3 cut(s) 1183, 3072, 4475
BmeRI GACNNNNNGTC 1 cut(s) 536
BmeT110I CYCGRG 2 cut(s) 2419, 3664
BmgBI CACGTC 2 cut(s) 1028, 1699
BmgT120I GGNCC 3 cut(s) 1183, 3072, 4475
BmiI GGNNCC 8 cut(s) 60, 369, 851, 927, 1884, 2516, 3218, 4100
BmrFI CCNGG 5 cut(s) 1056, 1498, 3201, 3214, 4233
BpiI GAAGAC 9 cut(s) 108, 1260, 1338, 1626, 2064, 2582, 2805, 4032, 4593
BpmI CTGGAG 2 cut(s) 2658, 4769
Bpu10I CCTNAGC 3 cut(s) 2793, 2897, 3401
Bpu1102I GCTNAGC 1 cut(s) 3157
Bpu14I TTCGAA 2 cut(s) 751, 3046
BpuEI CTTGAG 2 cut(s) 4187, 4435
BpuMI CCSGG 1 cut(s) 3214
BsaAI YACGTR 3 cut(s) 364, 3362, 4771
BsaBI GATNNNNATC 1 cut(s) 1063
BsaHI GRCGYC 3 cut(s) 471, 2579, 3621
BsaI GGTCTC 2 cut(s) 2657, 4242
BsaWI WCCGGW 5 cut(s) 1437, 1670, 2102, 3964, 4699
Bsc4I CCNNNNNNNGG 7 cut(s) 1304, 1406, 2509, 3069, 3134, 3609, 4756
Bse8I GATNNNNATC 1 cut(s) 1063
BseAI TCCGGA 1 cut(s) 1437
BseBI CCWGG 4 cut(s) 1056, 1498, 3201, 4233
BseJI GATNNNNATC 1 cut(s) 1063
BseLI CCNNNNNNNGG 7 cut(s) 1304, 1406, 2509, 3069, 3134, 3609, 4756
BseMII CTCAG 5 cut(s) 510, 924, 2784, 2911, 4734
BseRI GAGGAG 4 cut(s) 51, 213, 609, 3134
BseSI GKGCMC 2 cut(s) 4101, 4751
BseX3I CGGCCG 1 cut(s) 1583
BseXI GCAGC 9 cut(s) 403, 501, 576, 1534, 1972, 2662, 2684, 2840, 3805
BseYI CCCAGC 4 cut(s) 501, 1197, 1207, 2341
BsgI GTGCAG 5 cut(s) 402, 1141, 2262, 3674, 4702
Bsh1236I CGCG 1 cut(s) 551
Bsh1285I CGRYCG 1 cut(s) 1586
BshFI GGCC 8 cut(s) 5, 23, 230, 410, 1585, 3056, 3127, 3238
BshNI GGYRCC 3 cut(s) 849, 2514, 4098
BsiEI CGRYCG 1 cut(s) 1586
BsiHKAI GWGCWC 3 cut(s) 2962, 3327, 4707
BsiHKCI CYCGRG 2 cut(s) 2419, 3664
BsiSI CCGG 7 cut(s) 1438, 1671, 2103, 3214, 3965, 4667, 4700
BslFI GGGAC 3 cut(s) 482, 667, 1729
BslI CCNNNNNNNGG 7 cut(s) 1304, 1406, 2509, 3069, 3134, 3609, 4756
BsmAI GTCTC 6 cut(s) 1018, 1557, 1907, 2657, 4242, 4312
BsmBI CGTCTC 2 cut(s) 1018, 1557
BsmFI GGGAC 3 cut(s) 482, 667, 1729
BsmI GAATGC 4 cut(s) 884, 2020, 2648, 4294
BsnI GGCC 8 cut(s) 5, 23, 230, 410, 1585, 3056, 3127, 3238
Bso31I GGTCTC 2 cut(s) 2657, 4242
BsoBI CYCGRG 2 cut(s) 2419, 3664
Bsp119I TTCGAA 2 cut(s) 751, 3046
Bsp1286I GDGCHC 5 cut(s) 2962, 3327, 4101, 4707, 4751
Bsp13I TCCGGA 1 cut(s) 1437
Bsp1407I TGTACA 2 cut(s) 132, 976
Bsp1720I GCTNAGC 1 cut(s) 3157
Bsp19I CCATGG 2 cut(s) 2139, 4057
BspANI GGCC 8 cut(s) 5, 23, 230, 410, 1585, 3056, 3127, 3238
BspCNI CTCAG 5 cut(s) 511, 925, 2785, 2910, 4735
BspEI TCCGGA 1 cut(s) 1437
BspFNI CGCG 1 cut(s) 551
BspHI TCATGA 8 cut(s) 1003, 1480, 2151, 2361, 2571, 2596, 3250, 3276
BspLI GGNNCC 8 cut(s) 60, 369, 851, 927, 1884, 2516, 3218, 4100
BspMAI CTGCAG 1 cut(s) 566
BspPI GGATC 9 cut(s) 362, 375, 920, 933, 1571, 2366, 2521, 4387, 4391
BspQI GCTCTTC 1 cut(s) 420
BspT104I TTCGAA 2 cut(s) 751, 3046
BspT107I GGYRCC 3 cut(s) 849, 2514, 4098
BspTI CTTAAG 3 cut(s) 3530, 3539, 3569
BspTNI GGTCTC 2 cut(s) 2657, 4242
BsrBI CCGCTC 2 cut(s) 407, 430
BsrGI TGTACA 2 cut(s) 132, 976
BssNAI GTATAC 1 cut(s) 3359
BssNI GRCGYC 3 cut(s) 471, 2579, 3621
BssT1I CCWWGG 5 cut(s) 6, 411, 2139, 2185, 4057
Bst1107I GTATAC 1 cut(s) 3359
Bst2UI CCWGG 4 cut(s) 1056, 1498, 3201, 4233
Bst4CI ACNGT 9 cut(s) 730, 1720, 2182, 2608, 3008, 4176, 4302, 4555, 4889
Bst6I CTCTTC 4 cut(s) 420, 789, 1905, 4553
BstACI GRCGYC 3 cut(s) 471, 2579, 3621
BstAFI CTTAAG 3 cut(s) 3530, 3539, 3569
BstAPI GCANNNNNTGC 1 cut(s) 2499
BstAUI TGTACA 2 cut(s) 132, 976
BstBAI YACGTR 3 cut(s) 364, 3362, 4771
BstBI TTCGAA 2 cut(s) 751, 3046
BstC8I GCNNGC 7 cut(s) 1113, 2136, 2378, 3823, 3827, 4247, 4636
BstDSI CCRYGG 2 cut(s) 2139, 4057
BstFNI CGCG 1 cut(s) 551
BstH2I RGCGCY 1 cut(s) 2211
BstHHI GCGC 3 cut(s) 384, 2210, 3400
BstMAI GTCTC 6 cut(s) 1018, 1557, 1907, 2657, 4242, 4312
BstMCI CGRYCG 1 cut(s) 1586
BstNI CCWGG 4 cut(s) 1056, 1498, 3201, 4233
BstNSI RCATGY 4 cut(s) 2237, 2380, 3825, 3901
BstSCI CCNGG 5 cut(s) 1054, 1496, 3199, 3212, 4231
BstSFI CTRYAG 2 cut(s) 562, 1140
BstSLI GKGCMC 2 cut(s) 4101, 4751
BstUI CGCG 1 cut(s) 551
BstV1I GCAGC 9 cut(s) 403, 501, 576, 1534, 1972, 2662, 2684, 2840, 3805
BstV2I GAAGAC 9 cut(s) 108, 1260, 1338, 1626, 2064, 2582, 2805, 4032, 4593
BstX2I RGATCY 6 cut(s) 367, 925, 1576, 2526, 4379, 4693
BstXI CCANNNNNNTGG 1 cut(s) 2258
BstYI RGATCY 6 cut(s) 367, 925, 1576, 2526, 4379, 4693
BstZ17I GTATAC 1 cut(s) 3359
BstZI CGGCCG 1 cut(s) 1583
BsuI GTATCC 2 cut(s) 230, 2302
BsuRI GGCC 8 cut(s) 5, 23, 230, 410, 1585, 3056, 3127, 3238
BtgI CCRYGG 2 cut(s) 2139, 4057
BtrI CACGTC 2 cut(s) 1028, 1699
BtsI GCAGTG 1 cut(s) 326
BtsIMutI CAGTG 8 cut(s) 326, 1841, 1887, 1982, 2178, 3624, 4073, 4719
Cac8I GCNNGC 7 cut(s) 1113, 2136, 2378, 3823, 3827, 4247, 4636
CaiI CAGNNNCTG 1 cut(s) 1214
CciI TCATGA 8 cut(s) 1003, 1480, 2151, 2361, 2571, 2596, 3250, 3276
CfoI GCGC 3 cut(s) 384, 2210, 3400
Cfr13I GGNCC 3 cut(s) 1183, 3072, 4475
CpoI CGGWCCG 1 cut(s) 3072
CseI GACGC 2 cut(s) 479, 1539
CspI CGGWCCG 1 cut(s) 3072
DraI TTTAAA 3 cut(s) 436, 1992, 3789
DriI GACNNNNNGTC 1 cut(s) 536
EaeI YGGCCR 4 cut(s) 1583, 3054, 3125, 3236
EagI CGGCCG 1 cut(s) 1583
Eam1104I CTCTTC 4 cut(s) 420, 789, 1905, 4553
Eam1105I GACNNNNNGTC 1 cut(s) 536
EarI CTCTTC 4 cut(s) 420, 789, 1905, 4553
EciI GGCGGA 2 cut(s) 775, 1545
Ecl136II GAGCTC 1 cut(s) 3325
EclXI CGGCCG 1 cut(s) 1583
Eco130I CCWWGG 5 cut(s) 6, 411, 2139, 2185, 4057
Eco24I GRGCYC 1 cut(s) 3327
Eco31I GGTCTC 2 cut(s) 2657, 4242
Eco32I GATATC 4 cut(s) 175, 2878, 3367, 3635
Eco47I GGWCC 3 cut(s) 1183, 3072, 4475
Eco52I CGGCCG 1 cut(s) 1583
Eco53kI GAGCTC 1 cut(s) 3325
Eco57I CTGAAG 1 cut(s) 396
Eco72I CACGTG 1 cut(s) 364
Eco88I CYCGRG 2 cut(s) 2419, 3664
EcoICRI GAGCTC 1 cut(s) 3325
EcoRI GAATTC 2 cut(s) 900, 2430
EcoRII CCWGG 4 cut(s) 1054, 1496, 3199, 4231
EcoRV GATATC 4 cut(s) 175, 2878, 3367, 3635
EcoT14I CCWWGG 5 cut(s) 6, 411, 2139, 2185, 4057
EcoT22I ATGCAT 2 cut(s) 884, 3878
EcoT38I GRGCYC 1 cut(s) 3327
ErhI CCWWGG 5 cut(s) 6, 411, 2139, 2185, 4057
Esp3I CGTCTC 2 cut(s) 1018, 1557
FalI AAGNNNNNCTT 8 cut(s) 1077, 1109, 1323, 1355, 1515, 1547, 2825, 2857
FaqI GGGAC 3 cut(s) 482, 667, 1729
FauI CCCGC 1 cut(s) 105
FauNDI CATATG 1 cut(s) 4466
FbaI TGATCA 3 cut(s) 1677, 2269, 2277
FblI GTMKAC 6 cut(s) 587, 1126, 1139, 1148, 3358, 4442
FriOI GRGCYC 1 cut(s) 3327
GlaI GCGC 3 cut(s) 383, 2209, 3399
GsaI CCCAGC 4 cut(s) 505, 1201, 1211, 2345
GsuI CTGGAG 2 cut(s) 2658, 4769
HaeII RGCGCY 1 cut(s) 2211
HaeIII GGCC 8 cut(s) 5, 23, 230, 410, 1585, 3056, 3127, 3238
HapII CCGG 7 cut(s) 1438, 1671, 2103, 3214, 3965, 4667, 4700
HgaI GACGC 2 cut(s) 479, 1539
HhaI GCGC 3 cut(s) 384, 2210, 3400
Hin1I GRCGYC 3 cut(s) 471, 2579, 3621
Hin6I GCGC 3 cut(s) 382, 2208, 3398
HinP1I GCGC 3 cut(s) 382, 2208, 3398
HincII GTYRAC 5 cut(s) 588, 1149, 2782, 3771, 4305
HindII GTYRAC 5 cut(s) 588, 1149, 2782, 3771, 4305
HindIII AAGCTT 4 cut(s) 1929, 2985, 3287, 3296
HpaII CCGG 7 cut(s) 1438, 1671, 2103, 3214, 3965, 4667, 4700
HphI GGTGA 9 cut(s) 668, 811, 1459, 1507, 1513, 2470, 3095, 4232, 4297
Hpy99I CGWCG 4 cut(s) 182, 592, 2041, 2584
HpyCH4III ACNGT 9 cut(s) 730, 1720, 2182, 2608, 3008, 4176, 4302, 4555, 4889
Hsp92I GRCGYC 3 cut(s) 471, 2579, 3621
HspAI GCGC 3 cut(s) 382, 2208, 3398
Kpn2I TCCGGA 1 cut(s) 1437
Ksp22I TGATCA 3 cut(s) 1677, 2269, 2277
LguI GCTCTTC 1 cut(s) 420
LmnI GCTCC 7 cut(s) 64, 404, 1216, 3222, 3330, 3909, 4486
Lsp1109I GCAGC 9 cut(s) 403, 501, 576, 1534, 1972, 2662, 2684, 2840, 3805
MbiI CCGCTC 2 cut(s) 407, 430
MfeI CAATTG 2 cut(s) 2883, 3955
MflI RGATCY 6 cut(s) 367, 925, 1576, 2526, 4379, 4693
MhlI GDGCHC 5 cut(s) 2962, 3327, 4101, 4707, 4751
MlsI TGGCCA 3 cut(s) 3056, 3127, 3238
MluNI TGGCCA 3 cut(s) 3056, 3127, 3238
MlyI GAGTC 3 cut(s) 1154, 3931, 4632
MmeI TCCRAC 6 cut(s) 565, 605, 2060, 3597, 3762, 4563
Mox20I TGGCCA 3 cut(s) 3056, 3127, 3238
Mph1103I ATGCAT 2 cut(s) 884, 3878
MroI TCCGGA 1 cut(s) 1437
MroXI GAANNNNTTC 7 cut(s) 342, 747, 990, 2316, 2567, 3208, 3378
MscI TGGCCA 3 cut(s) 3056, 3127, 3238
MslI CAYNNNNRTG 5 cut(s) 847, 1673, 2238, 3029, 4833
Msp20I TGGCCA 3 cut(s) 3056, 3127, 3238
MspA1I CMGCKG 3 cut(s) 1403, 1568, 2675
MspCI CTTAAG 3 cut(s) 3530, 3539, 3569
MspI CCGG 7 cut(s) 1438, 1671, 2103, 3214, 3965, 4667, 4700
MspR9I CCNGG 5 cut(s) 1056, 1498, 3201, 3214, 4233
MunI CAATTG 2 cut(s) 2883, 3955
Mva1269I GAATGC 4 cut(s) 884, 2020, 2648, 4294
MvaI CCWGG 4 cut(s) 1056, 1498, 3201, 4233
MvnI CGCG 1 cut(s) 551
NciI CCSGG 1 cut(s) 3214
NcoI CCATGG 2 cut(s) 2139, 4057
NdeI CATATG 1 cut(s) 4466
NlaIV GGNNCC 8 cut(s) 60, 369, 851, 927, 1884, 2516, 3218, 4100
NmeAIII GCCGAG 2 cut(s) 88, 1561
NmuCI GTSAC 7 cut(s) 1465, 1501, 2176, 2682, 3171, 3622, 3985
NsiI ATGCAT 2 cut(s) 884, 3878
NspI RCATGY 4 cut(s) 2237, 2380, 3825, 3901
NspV TTCGAA 2 cut(s) 751, 3046
OliI CACNNNNGTG 1 cut(s) 1673
PaeI GCATGC 2 cut(s) 2380, 3825
PaeR7I CTCGAG 2 cut(s) 2419, 3664
PagI TCATGA 8 cut(s) 1003, 1480, 2151, 2361, 2571, 2596, 3250, 3276
PciI ACATGT 1 cut(s) 2233
PciSI GCTCTTC 1 cut(s) 420
PctI GAATGC 4 cut(s) 884, 2020, 2648, 4294
PdmI GAANNNNTTC 7 cut(s) 342, 747, 990, 2316, 2567, 3208, 3378
PflFI GACNNNGTC 1 cut(s) 4622
PflMI CCANNNNNTGG 2 cut(s) 1406, 2509
PleI GAGTC 3 cut(s) 1153, 3931, 4631
PmaCI CACGTG 1 cut(s) 364
PmlI CACGTG 1 cut(s) 364
PpsI GAGTC 3 cut(s) 1153, 3931, 4631
Ppu21I YACGTR 3 cut(s) 364, 3362, 4771
PscI ACATGT 1 cut(s) 2233
PsiI TTATAA 2 cut(s) 644, 2384
Psp124BI GAGCTC 1 cut(s) 3327
Psp6I CCWGG 4 cut(s) 1054, 1496, 3199, 4231
PspCI CACGTG 1 cut(s) 364
PspFI CCCAGC 4 cut(s) 501, 1197, 1207, 2341
PspGI CCWGG 4 cut(s) 1054, 1496, 3199, 4231
PspN4I GGNNCC 8 cut(s) 60, 369, 851, 927, 1884, 2516, 3218, 4100
PspPI GGNCC 3 cut(s) 1183, 3072, 4475
PstI CTGCAG 1 cut(s) 566
PstNI CAGNNNCTG 1 cut(s) 1214
PsuI RGATCY 6 cut(s) 367, 925, 1576, 2526, 4379, 4693
PsyI GACNNNGTC 1 cut(s) 4622
PvuII CAGCTG 3 cut(s) 1403, 1568, 2675
RseI CAYNNNNRTG 5 cut(s) 847, 1673, 2238, 3029, 4833
Rsr2I CGGWCCG 1 cut(s) 3072
RsrII CGGWCCG 1 cut(s) 3072
SacI GAGCTC 1 cut(s) 3327
SalI GTCGAC 2 cut(s) 586, 1147
SapI GCTCTTC 1 cut(s) 420
Sau96I GGNCC 3 cut(s) 1183, 3072, 4475
ScaI AGTACT 1 cut(s) 2088
SchI GAGTC 3 cut(s) 1154, 3931, 4632
ScrFI CCNGG 5 cut(s) 1056, 1498, 3201, 3214, 4233
SduI GDGCHC 5 cut(s) 2962, 3327, 4101, 4707, 4751
SfcI CTRYAG 2 cut(s) 562, 1140
Sfr274I CTCGAG 2 cut(s) 2419, 3664
SfuI TTCGAA 2 cut(s) 751, 3046
SinI GGWCC 3 cut(s) 1183, 3072, 4475
SlaI CTCGAG 2 cut(s) 2419, 3664
SmiMI CAYNNNNRTG 5 cut(s) 847, 1673, 2238, 3029, 4833
SmlI CTYRAG 7 cut(s) 2419, 3530, 3539, 3569, 3664, 4202, 4414
SmoI CTYRAG 7 cut(s) 2419, 3530, 3539, 3569, 3664, 4202, 4414
SpeI ACTAGT 3 cut(s) 185, 1129, 4456
SphI GCATGC 2 cut(s) 2380, 3825
SspI AATATT 1 cut(s) 3308
SstI GAGCTC 1 cut(s) 3327
StyD4I CCNGG 5 cut(s) 1054, 1496, 3199, 3212, 4231
StyI CCWWGG 5 cut(s) 6, 411, 2139, 2185, 4057
TaaI ACNGT 9 cut(s) 730, 1720, 2182, 2608, 3008, 4176, 4302, 4555, 4889
TaqI TCGA 8 cut(s) 177, 587, 751, 1148, 1749, 2420, 3046, 3665
TatI WGTACW 5 cut(s) 132, 976, 2086, 3843, 4011
TauI GCSGC 1 cut(s) 410
TscAI CASTG 8 cut(s) 326, 1841, 1894, 1982, 2185, 3631, 4080, 4726
TseFI GTSAC 7 cut(s) 1465, 1501, 2176, 2682, 3171, 3622, 3985
TseI GCWGC 9 cut(s) 416, 489, 564, 1547, 1985, 2672, 2675, 2853, 3818
Tsp45I GTSAC 7 cut(s) 1465, 1501, 2176, 2682, 3171, 3622, 3985
TspGWI ACGGA 5 cut(s) 195, 605, 2054, 3505, 4473
TspRI CASTG 8 cut(s) 326, 1841, 1894, 1982, 2185, 3631, 4080, 4726
Tth111I GACNNNGTC 1 cut(s) 4622
Van91I CCANNNNNTGG 2 cut(s) 1406, 2509
Vha464I CTTAAG 3 cut(s) 3530, 3539, 3569
VpaK11BI GGWCC 3 cut(s) 1183, 3072, 4475
XbaI TCTAGA 2 cut(s) 2990, 4447
XceI RCATGY 4 cut(s) 2237, 2380, 3825, 3901
XcmI CCANNNNNNNNNTGG 2 cut(s) 292, 1215
XhoI CTCGAG 2 cut(s) 2419, 3664
XmiI GTMKAC 6 cut(s) 587, 1126, 1139, 1148, 3358, 4442
XmnI GAANNNNTTC 7 cut(s) 342, 747, 990, 2316, 2567, 3208, 3378
ZraI GACGTC 2 cut(s) 2580, 3622
ZrmI AGTACT 1 cut(s) 2088
Zsp2I ATGCAT 2 cut(s) 884, 3878
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.