Rorug05G0466700

Disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000085
Physical Location & Seq
Forward (+)
64272069 .. 64275479
3411 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0466700.1

Sequence Viewer

Length: 1224 bp
ATGGGGGTCTGCTGGAGCGCTCAGATCAAAGCTGAGAGCCCGTTAAACACAGGTTCAAAGTTTGTTAGTACTGATGGCAGTACCAGCAGCAAGGTCTCATCATTTTCAGCACCTCCAACTCCTCGGACGGAGGGTGAGATCTTGCAGTCAACCAATTTGAGGAGCTTCAGTTTCTCTGACCTCAAATTGGCCACCAGGAATTTCCGTCCTGATAGTGTGTTAGGAGAAGGCGGCTTTGGTTCTGTTTTTAAAGGGTGGATTGATGAAAATTCATTTACAGCTGCAAAGCCTGGGACTGGCATAGTTTTGGCTGTGAAACGGCTTAACCAAGAAAGTTTCCAGGGTCATAGGGAGTGGTTGGCAGAAGTGAATTATTTGGGGCAGTTCCATCATCCTAATCTTGTGAAACTAATTGGCTATTGCTTGGAAGATGAGCAGCGCCTTTTGGTATATGAATTCATGCCTCGAGGCAGCCTGGAAAATCATTTGTTCAGGAGAGGTTCTTATTTTCAACCTCTTTCTTGGACCCTCCGGATGAAGGTTGCCCTTGGTGCTGCAAAGGGGCTGGCCTTTTTGCATAGTGCTGAAACAATGGTGATATATCGAGACTTCAAGACGTCTAATATCCTGCTTGATTCGAACTACAATGCAAAGCTGTCAGATTTTGGCTTGGCCAAGGATGGGCCAACAGGTGATAAAAGCCACGTCTCTACTAGGGTGATGGGCACATATGGATATGCAGCCCCAGAATATCTAGCCACAGGTCATCTTACTGCCAAGAGTGATATCTATAGTTTTGGAGTTGTCTTATTGGAGATGTTATCTGGCCGGAGAGCAGTTGACAAGAATCGGCCATCTGGGGAACACAATCTGGTTGAGTGGGCTAAACCCTTCCTGGCAAACAAGCGCAAGATCTTTCGCGTCATAGACAACCGTCTAGAAGGCCAGTATTCAATGGATGGAGCTTATAAGGTAGCTACCCTCGCATTACGATGCCTGTCCACAGAATCCAAGCTCAGGCCAACCATGGATGAGGTCGTCAAAGCACTGGAGCAACTGCAGGATTCTAATGTCCCCACCAGCAATCAAAGCCATGCACACAGGATGCGCAGGCGAAGTGCAGATGACGCTAGCAAAGCAAGGCGTGCATCTATAGAAGAAGCTAACAAAGCAAGGAATACTGTTGCTTATCCTCGGCCATCTGCTTCGCCCCTATATGCTTGA

Protein Analysis

407

Amino Acids

45.22

Weight (kDa)

9.47

Isoelectric Point (pI)

39.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 71 - 348 1.6e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 72 - 350 7.2e-46 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000085)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g05721 FvH4_2g05721 FvH4_3g35820 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35920 FvH4_3g38670 FvH4_3g43650 FvH4_3g43650 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44070 FvH4_5g01271 FvH4_5g02970 FvH4_5g02970 FvH4_5g02970 FvH4_5g27640 FvH4_5g27640 FvH4_5g27640 FvH4_6g05393 FvH4_6g52372 FvH4_7g06680 FvH4_7g12671 FvH4_7g13640 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31510
malus_domestica MD09G1227900.v1.1 MD11G1019800.v1.1 MD11G1020500.v1.1
prunus_persica Prupe.1G542800_v2.0.a1 Prupe.1G542800_v2.0.a1
pyrus_communis pycom11g01460 pycom11g01490 pycom11g01530 pycom11g01570 pycom15g35490
rosa_chinensis RchiOBHm_Chr1g0353711 RchiOBHm_Chr3g0473211 RchiOBHm_Chr3g0473291 RchiOBHm_Chr3g0473341 RchiOBHm_Chr3g0473381 RchiOBHm_Chr3g0473391 RchiOBHm_Chr3g0473441 RchiOBHm_Chr3g0473481 RchiOBHm_Chr3g0473531 RchiOBHm_Chr3g0473561 RchiOBHm_Chr3g0473571 RchiOBHm_Chr3g0483491 RchiOBHm_Chr3g0488681 RchiOBHm_Chr5g0059311 RchiOBHm_Chr5g0061291 RchiOBHm_Chr5g0061301 RchiOBHm_Chr5g0061331 RchiOBHm_Chr5g0064081 RchiOBHm_Chr5g0064111 RchiOBHm_Chr5g0064151 RchiOBHm_Chr5g0064171 RchiOBHm_Chr5g0069721 RchiOBHm_Chr5g0069731 RchiOBHm_Chr5g0069741 RchiOBHm_Chr5g0078251 RchiOBHm_Chr5g0078301 RchiOBHm_Chr5g0079511 RchiOBHm_Chr5g0079791 RchiOBHm_Chr5g0079811 RchiOBHm_Chr5g0079861 RchiOBHm_Chr5g0079881 RchiOBHm_Chr5g0080241 RchiOBHm_Chr5g0080281 RchiOBHm_Chr5g0080371 RchiOBHm_Chr5g0080671 RchiOBHm_Chr6g0256601 RchiOBHm_Chr6g0274791 RchiOBHm_Chr7g0221971 RchiOBHm_Chr7g0221981
rosa_laevigata RLG00000002106 RLG00000013523 RLG00000014806 RLG00000024010 RLG00000035451 RLG00000035455 RLG00000035464 RLG00000035705 RLG00000036094 RLG00000036817 RLG00000036825 RLG00000036826 RLG00000036848
rosa_multiflora Rmu_co8200400.1_g000001 Rmu_co8473147.1_g000001 Rmu_sc0000394.1_g000030 Rmu_sc0000555.1_g000030 Rmu_sc0000595.1_g000002 Rmu_sc0000595.1_g000006 Rmu_sc0000595.1_g000029 Rmu_sc0000689.1_g000018 Rmu_sc0000689.1_g000032 Rmu_sc0000689.1_g000041 Rmu_sc0000738.1_g000025 Rmu_sc0000826.1_g000016 Rmu_sc0000908.1_g000016 Rmu_sc0000908.1_g000019 Rmu_sc0000908.1_g000021 Rmu_sc0001208.1_g000087 Rmu_sc0001639.1_g000004 Rmu_sc0002075.1_g000004 Rmu_sc0002075.1_g000009 Rmu_sc0002187.1_g000042 Rmu_sc0002187.1_g000043 Rmu_sc0002187.1_g000060 Rmu_sc0002513.1_g000025 Rmu_sc0002983.1_g000008 Rmu_sc0003012.1_g000004 Rmu_sc0003069.1_g000019 Rmu_sc0003069.1_g000020 Rmu_sc0003069.1_g000047 Rmu_sc0003069.1_g000051 Rmu_sc0003069.1_g000053 Rmu_sc0003131.1_g000014 Rmu_sc0003514.1_g000003 Rmu_sc0003547.1_g000006 Rmu_sc0003547.1_g000008 Rmu_sc0004325.1_g000021 Rmu_sc0004482.1_g000004 Rmu_sc0004482.1_g000022 Rmu_sc0005006.1_g000004 Rmu_sc0005006.1_g000009 Rmu_sc0005006.1_g000010 Rmu_sc0005194.1_g000002 Rmu_sc0005194.1_g000003 Rmu_sc0005834.1_g000002 Rmu_sc0005947.1_g000023 Rmu_sc0006792.1_g000026 Rmu_sc0007612.1_g000001 Rmu_sc0007793.1_g000024 Rmu_sc0007793.1_g000025 Rmu_sc0008050.1_g000015 Rmu_sc0008336.1_g000003 Rmu_sc0010248.1_g000002 Rmu_sc0011921.1_g000001 Rmu_sc0011921.1_g000006 Rmu_sc0012138.1_g000001 Rmu_sc0016164.1_g000015 Rmu_sc0018807.1_g000005 Rmu_sc0030948.1_g000001 Rmu_sc0042587.1_g000001 Rmu_ssc0000170.1_g000020 Rmu_ssc0000170.1_g000026 Rmu_ssc0000170.1_g000029
rosa_roxburghii Rroxscaffold_1G00003040 Rroxscaffold_1G00003080 Rroxscaffold_1G00003430 Rroxscaffold_1G00003490 Rroxscaffold_1G00011370 Rroxscaffold_1G00016780 Rroxscaffold_1G00019390 Rroxscaffold_1G00019400 Rroxscaffold_1G00019420 Rroxscaffold_1G00021170 Rroxscaffold_3G00237530 Rroxscaffold_3G00246470 Rroxscaffold_4G00301730 Rroxscaffold_4G00309300 Rroxscaffold_6G00398250 Rroxscaffold_6G00398270 Rroxscaffold_6G00398280 Rroxscaffold_6G00408070 Rroxscaffold_7G00193940 Rroxscaffold_7G00209570
rosa_rugosa Rorug01G0237100 Rorug03G0098200 Rorug03G0132200 Rorug03G0132400 Rorug03G0132500 Rorug03G0132500 Rorug03G0132500 Rorug03G0132700 Rorug03G0132800 Rorug03G0205900 Rorug03G0206100 Rorug03G0206100 Rorug03G0206300 Rorug03G0206400 Rorug03G0206400 Rorug03G0240700 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug05G0322400 Rorug05G0339300 Rorug05G0339500 Rorug05G0362200 Rorug05G0362300 Rorug05G0362400 Rorug05G0362600 Rorug05G0362700 Rorug05G0362800 Rorug05G0363100 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0459900 Rorug05G0464600 Rorug05G0465000 Rorug05G0465100 Rorug05G0465200 Rorug05G0466000 Rorug05G0466300 Rorug05G0466400 Rorug05G0466500 Rorug05G0466600 Rorug05G0466700 Rorug05G0466700 Rorug05G0466700 Rorug05G0466800 Rorug05G0466900 Rorug05G0468100 Rorug05G0562200 Rorug05G0562300 Rorug06G0084400 Rorug06G0084500 Rorug06G0084500 Rorug06G0084600 Rorug07G0136400 Rorug07G0204500 Rorug07G0204600 Rorug07G0221500
rosa_samantha Rh5CG438200 Rh5CG569900 Rh6AG080700 Rh7CG362800 Rh7DG275900 Rh7DG343100
rosa_wichuraiana Rw0G004790 Rw0G008160 Rw0G008170 Rw0G008200 Rw0G008210 Rw0G012980 Rw0G013670 Rw0G019920 Rw0G020380 Rw0G022790 Rw0G022800 Rw0G023350 Rw1G005530 Rw1G021740 Rw3G013910 Rw3G015980 Rw3G023020 Rw3G023030 Rw3G025580 Rw5G027180 Rw5G037760 Rw5G037770 Rw5G037780 Rw5G037790 Rw5G037810 Rw5G037820 Rw5G039500 Rw5G039520 Rw5G039530 Rw5G039540 Rw5G039550 Rw5G039570 Rw5G039580 Rw5G039610 Rw5G039630 Rw5G039660 Rw5G042590 Rw5G047840 Rw5G048170 Rw5G048400 Rw5G048470 Rw5G048540 Rw6G007030 Rw6G007080 Rw6G007460 Rw6G017430 Rw7G023150 Rw7G023260 Rw7G029260 Rw7G029270 Rw7G030950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 969
AatII GACGTC 1 cut(s) 620
AbsI CCTCGAGG 1 cut(s) 465
Acc16I TGCGCA 1 cut(s) 1109
AccII CGCG 1 cut(s) 921
AccIII TCCGGA 1 cut(s) 531
AciI CCGC 1 cut(s) 231
AcoI YGGCCR 5 cut(s) 189, 672, 826, 851, 1196
AcsI RAATTY 3 cut(s) 199, 268, 455
AcuI CTGAAG 1 cut(s) 151
AcyI GRCGYC 1 cut(s) 617
AfaI GTAC 2 cut(s) 70, 82
AfeI AGCGCT 1 cut(s) 19
AfiI CCNNNNNNNGG 6 cut(s) 159, 187, 296, 538, 681, 1017
AgsI TTSAA 4 cut(s) 57, 512, 613, 954
AjiI CACGTC 1 cut(s) 706
AjnI CCWGG 5 cut(s) 194, 289, 339, 474, 894
AjuI GAANNNNNNNTTGG 2 cut(s) 219, 251
AluBI AGCT 8 cut(s) 32, 165, 281, 655, 965, 977, 1015, 1163
AluI AGCT 8 cut(s) 32, 165, 281, 655, 965, 977, 1015, 1163
Alw26I GTCTC 3 cut(s) 100, 600, 712
Ama87I CYCGRG 1 cut(s) 465
Aor13HI TCCGGA 1 cut(s) 531
Aor51HI AGCGCT 1 cut(s) 19
AoxI GGCC 9 cut(s) 189, 567, 672, 683, 826, 851, 943, 1019, 1196
ApeKI GCWGC 6 cut(s) 87, 281, 436, 471, 554, 740
ApoI RAATTY 3 cut(s) 199, 268, 455
AspLEI GCGC 4 cut(s) 20, 441, 909, 1110
AspS9I GGNCC 2 cut(s) 525, 683
AsuHPI GGTGA 4 cut(s) 146, 607, 704, 730
AsuII TTCGAA 1 cut(s) 638
AsuNHI GCTAGC 1 cut(s) 1130
AvaI CYCGRG 1 cut(s) 465
AvaII GGWCC 1 cut(s) 525
BaeGI GKGCMC 1 cut(s) 728
BalI TGGCCA 2 cut(s) 191, 674
BanII GRGCYC 1 cut(s) 41
BbvI GCAGC 6 cut(s) 99, 268, 448, 483, 541, 752
BccI CCATC 7 cut(s) 68, 396, 674, 715, 862, 953, 1207
BceAI ACGGC 1 cut(s) 335
BciT130I CCWGG 5 cut(s) 196, 291, 341, 476, 896
BcoDI GTCTC 3 cut(s) 100, 600, 712
BfaI CTAG 4 cut(s) 714, 755, 938, 1131
BfmI CTRYAG 3 cut(s) 790, 1058, 1152
BfoI RGCGCY 2 cut(s) 21, 442
BglII AGATCT 2 cut(s) 138, 912
BisI GCNGC 7 cut(s) 88, 232, 282, 437, 472, 555, 741
BlsI GCNGC 7 cut(s) 89, 233, 283, 438, 473, 556, 742
BmcAI AGTACT 1 cut(s) 70
Bme1390I CCNGG 5 cut(s) 196, 291, 341, 476, 896
Bme18I GGWCC 1 cut(s) 525
BmeT110I CYCGRG 1 cut(s) 465
BmgBI CACGTC 1 cut(s) 706
BmgT120I GGNCC 2 cut(s) 525, 683
BmiI GGNNCC 1 cut(s) 527
BmrFI CCNGG 5 cut(s) 196, 291, 341, 476, 896
BmsI GCATC 3 cut(s) 983, 1095, 1157
BmtI GCTAGC 1 cut(s) 1134
BoxI GACNNNNGTC 1 cut(s) 933
BpmI CTGGAG 2 cut(s) 34, 1070
Bpu10I CCTNAGC 1 cut(s) 1016
Bpu14I TTCGAA 1 cut(s) 638
BsaHI GRCGYC 1 cut(s) 617
BsaI GGTCTC 1 cut(s) 100
BsaJI CCNNGG 7 cut(s) 122, 290, 340, 547, 675, 1026, 1193
BsaWI WCCGGW 1 cut(s) 531
BsaXI ACNNNNNCTCC 2 cut(s) 154, 184
Bsc4I CCNNNNNNNGG 6 cut(s) 159, 187, 296, 538, 681, 1017
Bse1I ACTGG 3 cut(s) 301, 946, 1053
BseAI TCCGGA 1 cut(s) 531
BseBI CCWGG 5 cut(s) 196, 291, 341, 476, 896
BseDI CCNNGG 7 cut(s) 122, 290, 340, 547, 675, 1026, 1193
BseGI GGATG 6 cut(s) 391, 540, 685, 964, 1036, 1110
BseLI CCNNNNNNNGG 6 cut(s) 159, 187, 296, 538, 681, 1017
BseMII CTCAG 3 cut(s) 24, 35, 1030
BseNI ACTGG 3 cut(s) 301, 946, 1053
BseRI GAGGAG 2 cut(s) 111, 175
BseSI GKGCMC 1 cut(s) 728
BseXI GCAGC 6 cut(s) 99, 268, 448, 483, 541, 752
BsgI GTGCAG 1 cut(s) 1140
Bsh1236I CGCG 1 cut(s) 921
BshFI GGCC 9 cut(s) 191, 569, 674, 685, 828, 853, 945, 1021, 1198
BsiHKCI CYCGRG 1 cut(s) 465
BsiSI CCGG 2 cut(s) 532, 829
BslFI GGGAC 2 cut(s) 307, 1058
BslI CCNNNNNNNGG 6 cut(s) 159, 187, 296, 538, 681, 1017
BsmAI GTCTC 3 cut(s) 100, 600, 712
BsmBI CGTCTC 1 cut(s) 712
BsmFI GGGAC 2 cut(s) 307, 1058
BsnI GGCC 9 cut(s) 191, 569, 674, 685, 828, 853, 945, 1021, 1198
Bso31I GGTCTC 1 cut(s) 100
BsoBI CYCGRG 1 cut(s) 465
Bsp119I TTCGAA 1 cut(s) 638
Bsp1286I GDGCHC 2 cut(s) 41, 728
Bsp13I TCCGGA 1 cut(s) 531
Bsp143I GATC 3 cut(s) 24, 138, 912
Bsp19I CCATGG 1 cut(s) 1026
BspACI CCGC 1 cut(s) 231
BspANI GGCC 9 cut(s) 191, 569, 674, 685, 828, 853, 945, 1021, 1198
BspCNI CTCAG 3 cut(s) 25, 34, 1029
BspEI TCCGGA 1 cut(s) 531
BspFNI CGCG 1 cut(s) 921
BspLI GGNNCC 1 cut(s) 527
BspMAI CTGCAG 1 cut(s) 1062
BspOI GCTAGC 1 cut(s) 1134
BspT104I TTCGAA 1 cut(s) 638
BspTNI GGTCTC 1 cut(s) 100
BsrI ACTGG 3 cut(s) 301, 946, 1053
BssECI CCNNGG 7 cut(s) 122, 290, 340, 547, 675, 1026, 1193
BssMI GATC 3 cut(s) 24, 138, 912
BssNI GRCGYC 1 cut(s) 617
BssT1I CCWWGG 3 cut(s) 547, 675, 1026
Bst2UI CCWGG 5 cut(s) 196, 291, 341, 476, 896
Bst4CI ACNGT 2 cut(s) 935, 1183
BstACI GRCGYC 1 cut(s) 617
BstAPI GCANNNNNTGC 1 cut(s) 1145
BstBI TTCGAA 1 cut(s) 638
BstC8I GCNNGC 4 cut(s) 567, 1112, 1132, 1146
BstDEI CTNAG 3 cut(s) 21, 33, 1016
BstDSI CCRYGG 1 cut(s) 1026
BstF5I GGATG 6 cut(s) 391, 540, 685, 964, 1036, 1110
BstFNI CGCG 1 cut(s) 921
BstH2I RGCGCY 2 cut(s) 21, 442
BstHHI GCGC 4 cut(s) 20, 441, 909, 1110
BstKTI GATC 3 cut(s) 27, 141, 915
BstMAI GTCTC 3 cut(s) 100, 600, 712
BstMBI GATC 3 cut(s) 24, 138, 912
BstMWI GCNNNNNNNGC 8 cut(s) 84, 551, 983, 1089, 1127, 1136, 1145, 1169
BstNI CCWGG 5 cut(s) 196, 291, 341, 476, 896
BstPAI GACNNNNGTC 1 cut(s) 933
BstSCI CCNGG 5 cut(s) 194, 289, 339, 474, 894
BstSFI CTRYAG 3 cut(s) 790, 1058, 1152
BstSLI GKGCMC 1 cut(s) 728
BstUI CGCG 1 cut(s) 921
BstV1I GCAGC 6 cut(s) 99, 268, 448, 483, 541, 752
BstX2I RGATCY 2 cut(s) 138, 912
BstYI RGATCY 2 cut(s) 138, 912
BsuRI GGCC 9 cut(s) 191, 569, 674, 685, 828, 853, 945, 1021, 1198
BtgI CCRYGG 1 cut(s) 1026
BtrI CACGTC 1 cut(s) 706
BtsCI GGATG 6 cut(s) 391, 540, 685, 964, 1036, 1110
BtsIMutI CAGTG 1 cut(s) 1046
Cac8I GCNNGC 4 cut(s) 567, 1112, 1132, 1146
CfoI GCGC 4 cut(s) 20, 441, 909, 1110
Cfr13I GGNCC 2 cut(s) 525, 683
CseI GACGC 2 cut(s) 910, 1136
Csp6I GTAC 2 cut(s) 69, 81
CviAII CATG 3 cut(s) 460, 1027, 1094
CviQI GTAC 2 cut(s) 69, 81
DdeI CTNAG 3 cut(s) 21, 33, 1016
DpnI GATC 3 cut(s) 26, 140, 914
DpnII GATC 3 cut(s) 24, 138, 912
DraI TTTAAA 1 cut(s) 250
EaeI YGGCCR 5 cut(s) 189, 672, 826, 851, 1196
Eco130I CCWWGG 3 cut(s) 547, 675, 1026
Eco24I GRGCYC 1 cut(s) 41
Eco31I GGTCTC 1 cut(s) 100
Eco32I GATATC 1 cut(s) 787
Eco47I GGWCC 1 cut(s) 525
Eco47III AGCGCT 1 cut(s) 19
Eco57I CTGAAG 1 cut(s) 151
Eco88I CYCGRG 1 cut(s) 465
EcoRI GAATTC 1 cut(s) 455
EcoRII CCWGG 5 cut(s) 194, 289, 339, 474, 894
EcoRV GATATC 1 cut(s) 787
EcoT14I CCWWGG 3 cut(s) 547, 675, 1026
EcoT38I GRGCYC 1 cut(s) 41
ErhI CCWWGG 3 cut(s) 547, 675, 1026
Esp3I CGTCTC 1 cut(s) 712
FaeI CATG 3 cut(s) 463, 1030, 1097
FaqI GGGAC 2 cut(s) 307, 1058
FatI CATG 3 cut(s) 459, 1026, 1093
FauNDI CATATG 1 cut(s) 730
Fnu4HI GCNGC 7 cut(s) 88, 232, 282, 437, 472, 555, 741
FokI GGATG 6 cut(s) 378, 547, 692, 971, 1043, 1117
FriOI GRGCYC 1 cut(s) 41
Fsp4HI GCNGC 7 cut(s) 88, 232, 282, 437, 472, 555, 741
FspBI CTAG 4 cut(s) 714, 755, 938, 1131
FspI TGCGCA 1 cut(s) 1109
GlaI GCGC 4 cut(s) 19, 440, 908, 1109
GluI GCNGC 7 cut(s) 88, 232, 282, 437, 472, 555, 741
GsuI CTGGAG 2 cut(s) 34, 1070
HaeII RGCGCY 2 cut(s) 21, 442
HaeIII GGCC 9 cut(s) 191, 569, 674, 685, 828, 853, 945, 1021, 1198
HapII CCGG 2 cut(s) 532, 829
HgaI GACGC 2 cut(s) 910, 1136
HhaI GCGC 4 cut(s) 20, 441, 909, 1110
Hin1I GRCGYC 1 cut(s) 617
Hin1II CATG 3 cut(s) 463, 1030, 1097
Hin6I GCGC 4 cut(s) 18, 439, 907, 1108
HinP1I GCGC 4 cut(s) 18, 439, 907, 1108
HincII GTYRAC 2 cut(s) 150, 841
HindII GTYRAC 2 cut(s) 150, 841
HinfI GANTC 4 cut(s) 635, 847, 1007, 1064
HpaII CCGG 2 cut(s) 532, 829
HphI GGTGA 4 cut(s) 146, 607, 704, 730
Hpy166II GTNNAC 3 cut(s) 150, 841, 1002
Hpy188I TCNGA 4 cut(s) 24, 126, 178, 661
Hpy188III TCNNGA 6 cut(s) 209, 493, 532, 605, 613, 938
Hpy8I GTNNAC 3 cut(s) 150, 841, 1002
HpyAV CCTTC 4 cut(s) 221, 532, 901, 935
HpyCH4III ACNGT 2 cut(s) 935, 1183
HpyCH4IV ACGT 2 cut(s) 617, 705
HpyF10VI GCNNNNNNNGC 8 cut(s) 84, 551, 983, 1089, 1127, 1136, 1145, 1169
HpyF3I CTNAG 3 cut(s) 21, 33, 1016
HpySE526I ACGT 2 cut(s) 617, 705
Hsp92I GRCGYC 1 cut(s) 617
Hsp92II CATG 3 cut(s) 463, 1030, 1097
HspAI GCGC 4 cut(s) 18, 439, 907, 1108
Kpn2I TCCGGA 1 cut(s) 531
Kzo9I GATC 3 cut(s) 24, 138, 912
LmnI GCTCC 4 cut(s) 15, 162, 962, 1051
Lsp1109I GCAGC 6 cut(s) 99, 268, 448, 483, 541, 752
LweI GCATC 3 cut(s) 983, 1095, 1157
MaeI CTAG 4 cut(s) 714, 755, 938, 1131
MaeII ACGT 2 cut(s) 617, 705
MalI GATC 3 cut(s) 26, 140, 914
MboI GATC 3 cut(s) 24, 138, 912
MboII GAAGA 2 cut(s) 440, 1169
MflI RGATCY 2 cut(s) 138, 912
MhlI GDGCHC 2 cut(s) 41, 728
MlsI TGGCCA 2 cut(s) 191, 674
MluCI AATT 7 cut(s) 154, 185, 199, 268, 370, 411, 455
MluNI TGGCCA 2 cut(s) 191, 674
MmeI TCCRAC 1 cut(s) 140
Mox20I TGGCCA 2 cut(s) 191, 674
MroI TCCGGA 1 cut(s) 531
MscI TGGCCA 2 cut(s) 191, 674
MseI TTAA 3 cut(s) 44, 249, 324
MslI CAYNNNNRTG 1 cut(s) 991
Msp20I TGGCCA 2 cut(s) 191, 674
MspA1I CMGCKG 1 cut(s) 281
MspI CCGG 2 cut(s) 532, 829
MspR9I CCNGG 5 cut(s) 196, 291, 341, 476, 896
MvaI CCWGG 5 cut(s) 196, 291, 341, 476, 896
MvnI CGCG 1 cut(s) 921
MwoI GCNNNNNNNGC 8 cut(s) 84, 551, 983, 1089, 1127, 1136, 1145, 1169
NcoI CCATGG 1 cut(s) 1026
NdeI CATATG 1 cut(s) 730
NdeII GATC 3 cut(s) 24, 138, 912
NheI GCTAGC 1 cut(s) 1130
NlaIII CATG 3 cut(s) 463, 1030, 1097
NlaIV GGNNCC 1 cut(s) 527
NmeAIII GCCGAG 1 cut(s) 1174
NsbI TGCGCA 1 cut(s) 1109
NspV TTCGAA 1 cut(s) 638
PaeR7I CTCGAG 1 cut(s) 465
PfeI GAWTC 4 cut(s) 635, 847, 1007, 1064
PkrI GCNGC 7 cut(s) 89, 233, 283, 438, 473, 556, 742
PshAI GACNNNNGTC 1 cut(s) 933
PsiI TTATAA 1 cut(s) 969
Psp6I CCWGG 5 cut(s) 194, 289, 339, 474, 894
PspGI CCWGG 5 cut(s) 194, 289, 339, 474, 894
PspN4I GGNNCC 1 cut(s) 527
PspPI GGNCC 2 cut(s) 525, 683
PspXI VCTCGAGB 1 cut(s) 465
PstI CTGCAG 1 cut(s) 1062
PsuI RGATCY 2 cut(s) 138, 912
PvuII CAGCTG 1 cut(s) 281
RsaI GTAC 2 cut(s) 70, 82
RsaNI GTAC 2 cut(s) 69, 81
RseI CAYNNNNRTG 1 cut(s) 991
SaqAI TTAA 3 cut(s) 44, 249, 324
SatI GCNGC 7 cut(s) 88, 232, 282, 437, 472, 555, 741
Sau3AI GATC 3 cut(s) 24, 138, 912
Sau96I GGNCC 2 cut(s) 525, 683
ScaI AGTACT 1 cut(s) 70
ScrFI CCNGG 5 cut(s) 196, 291, 341, 476, 896
SduI GDGCHC 2 cut(s) 41, 728
SfaNI GCATC 3 cut(s) 983, 1095, 1157
SfcI CTRYAG 3 cut(s) 790, 1058, 1152
Sfr274I CTCGAG 1 cut(s) 465
SfuI TTCGAA 1 cut(s) 638
SinI GGWCC 1 cut(s) 525
SlaI CTCGAG 1 cut(s) 465
SmiMI CAYNNNNRTG 1 cut(s) 991
SmlI CTYRAG 1 cut(s) 465
SmoI CTYRAG 1 cut(s) 465
Sse9I AATT 7 cut(s) 154, 185, 199, 268, 370, 411, 455
SsiI CCGC 1 cut(s) 231
SspMI CTAG 4 cut(s) 714, 755, 938, 1131
StyD4I CCNGG 5 cut(s) 194, 289, 339, 474, 894
StyI CCWWGG 3 cut(s) 547, 675, 1026
TaaI ACNGT 2 cut(s) 935, 1183
TaiI ACGT 2 cut(s) 620, 708
TaqI TCGA 3 cut(s) 466, 604, 638
TasI AATT 7 cut(s) 154, 185, 199, 268, 370, 411, 455
TatI WGTACW 1 cut(s) 68
TauI GCSGC 1 cut(s) 234
TfiI GAWTC 4 cut(s) 635, 847, 1007, 1064
Tru1I TTAA 3 cut(s) 44, 249, 324
Tru9I TTAA 3 cut(s) 44, 249, 324
TscAI CASTG 1 cut(s) 1053
TseI GCWGC 6 cut(s) 87, 281, 436, 471, 554, 740
TspDTI ATGAA 5 cut(s) 261, 279, 448, 468, 551
TspGWI ACGGA 2 cut(s) 143, 194
TspRI CASTG 1 cut(s) 1053
VpaK11BI GGWCC 1 cut(s) 525
XapI RAATTY 3 cut(s) 199, 268, 455
XbaI TCTAGA 1 cut(s) 937
XhoI CTCGAG 1 cut(s) 465
XspI CTAG 4 cut(s) 714, 755, 938, 1131
ZraI GACGTC 1 cut(s) 618
ZrmI AGTACT 1 cut(s) 70
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.