Rmu_sc0000555.1_g000030

Disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000555.1
OG0000085
Physical Location & Seq
Forward (+)
119046 .. 122622
3577 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000555.1_g000030.1.cds

Sequence Viewer

Length: 3393 bp
atggcctcgagctcccaaacacttccttcgtcatcagctcctcagtggaagcctgatgtgtttctcagcttcaggggtgaagatactcggaagggtattgtatcctctttataccatgaattgaaaaccagaggaatacaaacattcatggatgaccaagggcttcagcaagggatggctatttctccaagtctcctaacagcaattgaggaatccaggtgtgcactcgttcttctatcgccaaactatgcttcttctacatggtgtttggatgaacttgcagagattcttcaatgctctgaagccaacaagacactgcttctgccaattttttataatgtggatccctctcatgtgcgacatcaaaagggaagttttgcagaagccttcaataagcatgaagagaggtataggcaaggcaatgatgatgcagagaatgtgaacaagtggagagctgctttaacacaagtggccaatctatctgggtttgattcaaacaaatatgggtctgacagagaacttatccaatgcattgtggaacttgtgtgccagaaagtacggcctattccaataatgcggagcagcaattttatagaatttgaatcaacaagagaagccatgaatgagctgatgaacgcattagaagatgataaggtcgctgccattggggtctatggaatgggaggggctgggaagacaaccatggtggaacatgtcggtgaacaagcccaaaaaagggggctttttgatcatgtgattatggctgttgtatcccaaaccccaaatacaagaaacattcaagacgcacttgcggatctgctgggcttgaaattggaggagcagtcagaaattggacgagcccgtagattgcagagggagatacttaaaagaaacaagatccttataatcttagacgacatttggaatacacttgacttgacaagcattggaattccctgctacaacgaacttcaaaaatgcaattccaaactgctattcaccacaaggatattgaatgtttgccataccatggagagccaagcaaaaattcatctcagtatcttatcagaagatgatgctttgaacttgtttttgaacaaggcaagaaggtcttttcaaaagtctacccttttctatgaagtagccagaaaggtagctagagaatgtgctggtctcccagttgcattgattgcagttgcgagggcacttggagataaaaattttgaagactggaaagaagcagctcgacaacttgagatgtctcaacctgccaaccctgacgagaagaaagttgtgttcaagtgtattaagttgagctatgattaccttgacagtgacgacgccaagtcttgcttcttgctttgctgcctattcccagaagattatgacatccgtgttgaagacttgatgagctatgggtttggaacagggttgtttcgacgtgtcaacaacacaatagaatctgccagagacagagcacattcggttactagataccttaaagcttcttgtctgcttttggatgggaaaaaagaaggatatgtaaggatgcatgatgtcattcgagatatggccatatccattgcattctctgtagatggccacgcctctttggtgaaaactaattgtcatttgaaagattggtcgatggatgcagacggaggctactcagcaatctcactaatcgagagcaacgtttgcaagcttcccaacaagttggtatgttcaaaactccagattttattgctacaaaaaaatgctgatataagagagatcccaataaccttttttcaaagccccaatgatttaagggtcttagatcttagcaacactggcatttcatcactgcccccatcattcagtctcctaaccagactccaagctttgcatttagatgattgcgagtccgtgattgacatatccatacttggaaaactgaaaaagcttgagattcttagtatgagacgctgttactctattaagaaatttccaaaagagattggaaatttgacgaatttaagaatgttggacttgactggaacccgttttgagacagttccctctcaagtgatatcaaggttgtatagattggaagttctgtacatgagatgtaattttggcgagtggggttgtaaagctgcgggaggctgcttgtgttttctttgtaagaatgctagctttgatgagttaattggcttgtcaagtttaaacactttgcaggttaccgtatgtgatgcagaatgcttgcctcaaaacgttgagttcaatccaaattgggacaggttttgtattagtatccgaagatacggcaagaggagagtaccctcttgcggcaatcttatcatttatgacgaggtcttcctacttcgttcttcaagaacattgatcatggcggaaaccatgaataacttacccgattggttcatcagtgtagtgacagaaagaacagatgctttatgcttcacaggtcaccgtggcttaattaaccttctcgaggaacatgaccgtgggagattacatggactcaagtatttgtgtatagaatcttcccaatgtgccaaagtgttgttgaacacaataacatggactagggtgtcaaatgaacctgtgtttgagaacttggaagcgttggacatctccgggggtctcttggaggagctatgtgtcggtgaattaccacctggctctctacgtaatcttaagaaattgatgatgggtatgtgtgattggttggtgaaaccgcttttaccgtcaaagttgttgcacagattagagagtctggaagaactatgttgttttcatatgcgggaaatgaaatatgtgtttggatttgaagggcatgaaccacaacacgttgtcttgacgaggctgagaatgatttcattgagactcatgaacagcttaataagcatatgggatggtcctgctccatctggaatcttccagagtctcaaaatcttttccttggttaagtgccagaaactggaatatctcttcacatctgatgtggctcgatgtcttttccaattggaagacgttttggtagaggattgcgatagcttggacagaataattgaagcgagtgaggaaatagagagcaacaagatcgttcttccacagttgaagaacttggttttaaaacgtcttccaaatctcacaaggctgtccagtacaagcagcagtactattgatattgaaatcgagtgcccaacattggaacacttatatgtctctgcgtgcccccagttatcaatctctgcttctgatttcaacagcagcaacgaagtccaactagatgattaccagcattggggcacactacggtataggatcgacgacgtgagttaccgctcaacctctctacttgggatgaggtatgtctccatgtcataa

Protein Analysis

1130

Amino Acids

127.85

Weight (kDa)

5.97

Isoelectric Point (pI)

46.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000085)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g05721 FvH4_2g05721 FvH4_3g35820 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35920 FvH4_3g38670 FvH4_3g43650 FvH4_3g43650 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44070 FvH4_5g01271 FvH4_5g02970 FvH4_5g02970 FvH4_5g02970 FvH4_5g27640 FvH4_5g27640 FvH4_5g27640 FvH4_6g05393 FvH4_6g52372 FvH4_7g06680 FvH4_7g12671 FvH4_7g13640 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31510
malus_domestica MD09G1227900.v1.1 MD11G1019800.v1.1 MD11G1020500.v1.1
prunus_persica Prupe.1G542800_v2.0.a1 Prupe.1G542800_v2.0.a1
pyrus_communis pycom11g01460 pycom11g01490 pycom11g01530 pycom11g01570 pycom15g35490
rosa_chinensis RchiOBHm_Chr1g0353711 RchiOBHm_Chr3g0473211 RchiOBHm_Chr3g0473291 RchiOBHm_Chr3g0473341 RchiOBHm_Chr3g0473381 RchiOBHm_Chr3g0473391 RchiOBHm_Chr3g0473441 RchiOBHm_Chr3g0473481 RchiOBHm_Chr3g0473531 RchiOBHm_Chr3g0473561 RchiOBHm_Chr3g0473571 RchiOBHm_Chr3g0483491 RchiOBHm_Chr3g0488681 RchiOBHm_Chr5g0059311 RchiOBHm_Chr5g0061291 RchiOBHm_Chr5g0061301 RchiOBHm_Chr5g0061331 RchiOBHm_Chr5g0064081 RchiOBHm_Chr5g0064111 RchiOBHm_Chr5g0064151 RchiOBHm_Chr5g0064171 RchiOBHm_Chr5g0069721 RchiOBHm_Chr5g0069731 RchiOBHm_Chr5g0069741 RchiOBHm_Chr5g0078251 RchiOBHm_Chr5g0078301 RchiOBHm_Chr5g0079511 RchiOBHm_Chr5g0079791 RchiOBHm_Chr5g0079811 RchiOBHm_Chr5g0079861 RchiOBHm_Chr5g0079881 RchiOBHm_Chr5g0080241 RchiOBHm_Chr5g0080281 RchiOBHm_Chr5g0080371 RchiOBHm_Chr5g0080671 RchiOBHm_Chr6g0256601 RchiOBHm_Chr6g0274791 RchiOBHm_Chr7g0221971 RchiOBHm_Chr7g0221981
rosa_laevigata RLG00000002106 RLG00000013523 RLG00000014806 RLG00000024010 RLG00000035451 RLG00000035455 RLG00000035464 RLG00000035705 RLG00000036094 RLG00000036817 RLG00000036825 RLG00000036826 RLG00000036848
rosa_multiflora Rmu_co8200400.1_g000001 Rmu_co8473147.1_g000001 Rmu_sc0000394.1_g000030 Rmu_sc0000555.1_g000030 Rmu_sc0000595.1_g000002 Rmu_sc0000595.1_g000006 Rmu_sc0000595.1_g000029 Rmu_sc0000689.1_g000018 Rmu_sc0000689.1_g000032 Rmu_sc0000689.1_g000041 Rmu_sc0000738.1_g000025 Rmu_sc0000826.1_g000016 Rmu_sc0000908.1_g000016 Rmu_sc0000908.1_g000019 Rmu_sc0000908.1_g000021 Rmu_sc0001208.1_g000087 Rmu_sc0001639.1_g000004 Rmu_sc0002075.1_g000004 Rmu_sc0002075.1_g000009 Rmu_sc0002187.1_g000042 Rmu_sc0002187.1_g000043 Rmu_sc0002187.1_g000060 Rmu_sc0002513.1_g000025 Rmu_sc0002983.1_g000008 Rmu_sc0003012.1_g000004 Rmu_sc0003069.1_g000019 Rmu_sc0003069.1_g000020 Rmu_sc0003069.1_g000047 Rmu_sc0003069.1_g000051 Rmu_sc0003069.1_g000053 Rmu_sc0003131.1_g000014 Rmu_sc0003514.1_g000003 Rmu_sc0003547.1_g000006 Rmu_sc0003547.1_g000008 Rmu_sc0004325.1_g000021 Rmu_sc0004482.1_g000004 Rmu_sc0004482.1_g000022 Rmu_sc0005006.1_g000004 Rmu_sc0005006.1_g000009 Rmu_sc0005006.1_g000010 Rmu_sc0005194.1_g000002 Rmu_sc0005194.1_g000003 Rmu_sc0005834.1_g000002 Rmu_sc0005947.1_g000023 Rmu_sc0006792.1_g000026 Rmu_sc0007612.1_g000001 Rmu_sc0007793.1_g000024 Rmu_sc0007793.1_g000025 Rmu_sc0008050.1_g000015 Rmu_sc0008336.1_g000003 Rmu_sc0010248.1_g000002 Rmu_sc0011921.1_g000001 Rmu_sc0011921.1_g000006 Rmu_sc0012138.1_g000001 Rmu_sc0016164.1_g000015 Rmu_sc0018807.1_g000005 Rmu_sc0030948.1_g000001 Rmu_sc0042587.1_g000001 Rmu_ssc0000170.1_g000020 Rmu_ssc0000170.1_g000026 Rmu_ssc0000170.1_g000029
rosa_roxburghii Rroxscaffold_1G00003040 Rroxscaffold_1G00003080 Rroxscaffold_1G00003430 Rroxscaffold_1G00003490 Rroxscaffold_1G00011370 Rroxscaffold_1G00016780 Rroxscaffold_1G00019390 Rroxscaffold_1G00019400 Rroxscaffold_1G00019420 Rroxscaffold_1G00021170 Rroxscaffold_3G00237530 Rroxscaffold_3G00246470 Rroxscaffold_4G00301730 Rroxscaffold_4G00309300 Rroxscaffold_6G00398250 Rroxscaffold_6G00398270 Rroxscaffold_6G00398280 Rroxscaffold_6G00408070 Rroxscaffold_7G00193940 Rroxscaffold_7G00209570
rosa_rugosa Rorug01G0237100 Rorug03G0098200 Rorug03G0132200 Rorug03G0132400 Rorug03G0132500 Rorug03G0132500 Rorug03G0132500 Rorug03G0132700 Rorug03G0132800 Rorug03G0205900 Rorug03G0206100 Rorug03G0206100 Rorug03G0206300 Rorug03G0206400 Rorug03G0206400 Rorug03G0240700 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug05G0322400 Rorug05G0339300 Rorug05G0339500 Rorug05G0362200 Rorug05G0362300 Rorug05G0362400 Rorug05G0362600 Rorug05G0362700 Rorug05G0362800 Rorug05G0363100 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0459900 Rorug05G0464600 Rorug05G0465000 Rorug05G0465100 Rorug05G0465200 Rorug05G0466000 Rorug05G0466300 Rorug05G0466400 Rorug05G0466500 Rorug05G0466600 Rorug05G0466700 Rorug05G0466700 Rorug05G0466700 Rorug05G0466800 Rorug05G0466900 Rorug05G0468100 Rorug05G0562200 Rorug05G0562300 Rorug06G0084400 Rorug06G0084500 Rorug06G0084500 Rorug06G0084600 Rorug07G0136400 Rorug07G0204500 Rorug07G0204600 Rorug07G0221500
rosa_samantha Rh5CG438200 Rh5CG569900 Rh6AG080700 Rh7CG362800 Rh7DG275900 Rh7DG343100
rosa_wichuraiana Rw0G004790 Rw0G008160 Rw0G008170 Rw0G008200 Rw0G008210 Rw0G012980 Rw0G013670 Rw0G019920 Rw0G020380 Rw0G022790 Rw0G022800 Rw0G023350 Rw1G005530 Rw1G021740 Rw3G013910 Rw3G015980 Rw3G023020 Rw3G023030 Rw3G025580 Rw5G027180 Rw5G037760 Rw5G037770 Rw5G037780 Rw5G037790 Rw5G037810 Rw5G037820 Rw5G039500 Rw5G039520 Rw5G039530 Rw5G039540 Rw5G039550 Rw5G039570 Rw5G039580 Rw5G039610 Rw5G039630 Rw5G039660 Rw5G042590 Rw5G047840 Rw5G048170 Rw5G048400 Rw5G048470 Rw5G048540 Rw6G007030 Rw6G007080 Rw6G007460 Rw6G017430 Rw7G023150 Rw7G023260 Rw7G029260 Rw7G029270 Rw7G030950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 336, 905
AasI GACNNNNNNGTC 1 cut(s) 2593
Acc36I ACCTGC 2 cut(s) 1276, 2209
AccB7I CCANNNNNTGG 2 cut(s) 1030, 2983
AccBSI CCGCTC 1 cut(s) 3351
AccI GTMKAC 1 cut(s) 1124
AciI CCGC 8 cut(s) 577, 812, 2141, 2331, 2393, 2741, 2806, 3349
AclI AACGTT 2 cut(s) 1695, 2256
AclWI GGATC 6 cut(s) 338, 351, 822, 892, 1768, 3338
AcoI YGGCCR 3 cut(s) 471, 1572, 1600
AcsI RAATTY 7 cut(s) 596, 951, 1047, 1219, 1985, 2005, 2014
AcuI CTGAAG 3 cut(s) 55, 149, 321
AcyI GRCGYC 1 cut(s) 1341
AfaI GTAC 5 cut(s) 558, 2102, 2322, 3172, 3184
AfiI CCNNNNNNNGG 8 cut(s) 735, 736, 1030, 2330, 2494, 2983, 3214, 3310
AflII CTTAAG 1 cut(s) 2699
AflIII ACRYGT 3 cut(s) 712, 1441, 2851
AhdI GACNNNNNGTC 1 cut(s) 1345
AjiI CACGTC 2 cut(s) 1442, 3340
AjnI CCWGG 2 cut(s) 215, 2680
AjuI GAANNNNNNNTTGG 8 cut(s) 235, 267, 980, 1012, 1032, 1064, 1337, 1369
Alw21I GWGCWC 3 cut(s) 14, 226, 1480
Alw44I GTGCAC 1 cut(s) 222
AlwI GGATC 6 cut(s) 338, 351, 822, 892, 1768, 3338
AlwNI CAGNNNCTG 1 cut(s) 2983
Ama87I CYCGRG 2 cut(s) 7, 2492
AoxI GGCC 5 cut(s) 3, 471, 560, 1572, 1600
ApaLI GTGCAC 1 cut(s) 222
ApeKI GCWGC 9 cut(s) 455, 582, 659, 1241, 1365, 2138, 2148, 3177, 3276
ApoI RAATTY 7 cut(s) 596, 951, 1047, 1219, 1985, 2005, 2014
Asp700I GAANNNNTTC 1 cut(s) 2878
AspS9I GGNCC 1 cut(s) 2921
AsuC2I CCSGG 1 cut(s) 2641
AsuHPI GGTGA 7 cut(s) 89, 731, 991, 1627, 2462, 2681, 2746
AsuNHI GCTAGC 1 cut(s) 2174
AvaI CYCGRG 2 cut(s) 7, 2492
AvaII GGWCC 1 cut(s) 2921
BaeGI GKGCMC 5 cut(s) 226, 1207, 3209, 3242, 3317
BalI TGGCCA 3 cut(s) 473, 1574, 1602
BamHI GGATCC 1 cut(s) 343
BanII GRGCYC 2 cut(s) 14, 862
BarI GAAGNNNNNNTAC 2 cut(s) 2530, 2562
BbsI GAAGAC 6 cut(s) 701, 1233, 1407, 2350, 3039, 3137
Bbv12I GWGCWC 3 cut(s) 14, 226, 1480
BbvI GCAGC 9 cut(s) 442, 594, 646, 1253, 1352, 2125, 2135, 3189, 3288
BccI CCATC 8 cut(s) 169, 1517, 1592, 1642, 1861, 2707, 2912, 2938
BceAI ACGGC 2 cut(s) 575, 2323
BcgI CGANNNNNNTGC 2 cut(s) 3088, 3122
BciT130I CCWGG 2 cut(s) 217, 2682
BciVI GTATCC 3 cut(s) 112, 781, 2306
BclI TGATCA 2 cut(s) 748, 2385
BcnI CCSGG 1 cut(s) 2641
BfaI CTAG 5 cut(s) 1158, 1491, 2175, 2589, 3293
BfmI CTRYAG 1 cut(s) 1593
BfrI CTTAAG 1 cut(s) 2699
BfuAI ACCTGC 2 cut(s) 1276, 2209
BfuI GTATCC 3 cut(s) 112, 781, 2306
BglII AGATCT 1 cut(s) 1819
BmcAI AGTACT 1 cut(s) 3184
Bme1390I CCNGG 3 cut(s) 217, 2641, 2682
Bme18I GGWCC 1 cut(s) 2921
BmeRI GACNNNNNGTC 1 cut(s) 1345
BmeT110I CYCGRG 2 cut(s) 7, 2492
BmgBI CACGTC 2 cut(s) 1442, 3340
BmgT120I GGNCC 1 cut(s) 2921
BmiI GGNNCC 2 cut(s) 345, 2041
BmrFI CCNGG 3 cut(s) 217, 2641, 2682
BmrI ACTGGG 2 cut(s) 1172, 3238
BmsI GCATC 6 cut(s) 418, 1066, 1539, 1642, 2224, 2440
BmtI GCTAGC 1 cut(s) 2178
BmuI ACTGGG 2 cut(s) 1172, 3238
BpiI GAAGAC 6 cut(s) 701, 1233, 1407, 2350, 3039, 3137
BpmI CTGGAG 1 cut(s) 1718
BpuEI CTTGAG 4 cut(s) 1274, 1967, 2049, 2510
BpuMI CCSGG 1 cut(s) 2641
BsaAI YACGTR 1 cut(s) 2693
BsaHI GRCGYC 1 cut(s) 1341
BsaI GGTCTC 2 cut(s) 1178, 2651
BsaJI CCNNGG 7 cut(s) 157, 702, 1029, 2473, 2506, 2640, 2964
BsaXI ACNNNNNCTCC 2 cut(s) 827, 857
Bsc4I CCNNNNNNNGG 8 cut(s) 735, 736, 1030, 2330, 2494, 2983, 3214, 3310
Bse1I ACTGG 7 cut(s) 1178, 1235, 1837, 2041, 2988, 3168, 3244
Bse3DI GCAATG 2 cut(s) 427, 1581
BseBI CCWGG 2 cut(s) 217, 2682
BseDI CCNNGG 7 cut(s) 157, 702, 1029, 2473, 2506, 2640, 2964
BseGI GGATG 9 cut(s) 157, 180, 277, 1389, 1528, 1554, 1657, 2923, 3375
BseLI CCNNNNNNNGG 8 cut(s) 735, 736, 1030, 2330, 2494, 2983, 3214, 3310
BseMI GCAATG 2 cut(s) 427, 1581
BseMII CTCAG 5 cut(s) 56, 79, 1069, 1683, 2861
BseNI ACTGG 7 cut(s) 1178, 1235, 1837, 2041, 2988, 3168, 3244
BseRI GAGGAG 4 cut(s) 30, 851, 2329, 2669
BseSI GKGCMC 5 cut(s) 226, 1207, 3209, 3242, 3317
BseXI GCAGC 9 cut(s) 442, 594, 646, 1253, 1352, 2125, 2135, 3189, 3288
BseYI CCCAGC 2 cut(s) 689, 820
BshFI GGCC 5 cut(s) 5, 473, 562, 1574, 1602
BsiHKAI GWGCWC 3 cut(s) 14, 226, 1480
BsiHKCI CYCGRG 2 cut(s) 7, 2492
BsiSI CCGG 1 cut(s) 2640
BslFI GGGAC 1 cut(s) 2291
BslI CCNNNNNNNGG 8 cut(s) 735, 736, 1030, 2330, 2494, 2983, 3214, 3310
BsmBI CGTCTC 1 cut(s) 1957
BsmFI GGGAC 1 cut(s) 2291
BsmI GAATGC 3 cut(s) 1586, 2176, 2246
BsnI GGCC 5 cut(s) 5, 473, 562, 1574, 1602
Bso31I GGTCTC 2 cut(s) 1178, 2651
BsoBI CYCGRG 2 cut(s) 7, 2492
Bsp1286I GDGCHC 8 cut(s) 14, 226, 862, 1207, 1480, 3209, 3242, 3317
Bsp1407I TGTACA 1 cut(s) 2100
Bsp143I GATC 9 cut(s) 343, 748, 814, 897, 1773, 1819, 2385, 3105, 3330
Bsp19I CCATGG 2 cut(s) 702, 1029
BspACI CCGC 8 cut(s) 577, 812, 2141, 2331, 2393, 2741, 2806, 3349
BspANI GGCC 5 cut(s) 5, 473, 562, 1574, 1602
BspCNI CTCAG 5 cut(s) 55, 78, 1068, 1682, 2862
BspHI TCATGA 1 cut(s) 2892
BspLI GGNNCC 2 cut(s) 345, 2041
BspMI ACCTGC 2 cut(s) 1276, 2209
BspOI GCTAGC 1 cut(s) 2178
BspPI GGATC 6 cut(s) 338, 351, 822, 892, 1768, 3338
BspTI CTTAAG 1 cut(s) 2699
BspTNI GGTCTC 2 cut(s) 1178, 2651
BsrBI CCGCTC 1 cut(s) 3351
BsrDI GCAATG 2 cut(s) 427, 1581
BsrGI TGTACA 1 cut(s) 2100
BsrI ACTGG 7 cut(s) 1178, 1235, 1837, 2041, 2988, 3168, 3244
BssECI CCNNGG 7 cut(s) 157, 702, 1029, 2473, 2506, 2640, 2964
BssMI GATC 9 cut(s) 343, 748, 814, 897, 1773, 1819, 2385, 3105, 3330
BssNI GRCGYC 1 cut(s) 1341
BssT1I CCWWGG 4 cut(s) 157, 702, 1029, 2964
Bst2UI CCWGG 2 cut(s) 217, 2682
Bst4CI ACNGT 8 cut(s) 1334, 2056, 2227, 2474, 2507, 2751, 3120, 3324
Bst6I CTCTTC 2 cut(s) 396, 2999
BstACI GRCGYC 1 cut(s) 1341
BstAFI CTTAAG 1 cut(s) 2699
BstAPI GCANNNNNTGC 2 cut(s) 1190, 1698
BstAUI TGTACA 1 cut(s) 2100
BstBAI YACGTR 1 cut(s) 2693
BstC8I GCNNGC 4 cut(s) 1703, 2176, 2246, 3238
BstDEI CTNAG 9 cut(s) 42, 65, 910, 1055, 1669, 1816, 1823, 1955, 2870
BstDSI CCRYGG 4 cut(s) 702, 1029, 2473, 2506
BstEII GGTNACC 2 cut(s) 2221, 2468
BstENI CCTNNNNNAGG 1 cut(s) 2492
BstF5I GGATG 9 cut(s) 157, 180, 277, 1389, 1528, 1554, 1657, 2923, 3375
BstKTI GATC 9 cut(s) 346, 751, 817, 900, 1776, 1822, 2388, 3108, 3333
BstMBI GATC 9 cut(s) 343, 748, 814, 897, 1773, 1819, 2385, 3105, 3330
BstMWI GCNNNNNNNGC 4 cut(s) 1190, 1698, 1833, 2907
BstNI CCWGG 2 cut(s) 217, 2682
BstNSI RCATGY 1 cut(s) 716
BstPI GGTNACC 2 cut(s) 2221, 2468
BstSCI CCNGG 3 cut(s) 215, 2639, 2680
BstSFI CTRYAG 1 cut(s) 1593
BstSLI GKGCMC 5 cut(s) 226, 1207, 3209, 3242, 3317
BstSNI TACGTA 1 cut(s) 2693
BstV1I GCAGC 9 cut(s) 442, 594, 646, 1253, 1352, 2125, 2135, 3189, 3288
BstV2I GAAGAC 6 cut(s) 701, 1233, 1407, 2350, 3039, 3137
BstX2I RGATCY 5 cut(s) 343, 814, 897, 1773, 1819
BstXI CCANNNNNNTGG 1 cut(s) 1717
BstYI RGATCY 5 cut(s) 343, 814, 897, 1773, 1819
BsuI GTATCC 3 cut(s) 112, 781, 2306
BsuRI GGCC 5 cut(s) 5, 473, 562, 1574, 1602
BtgI CCRYGG 4 cut(s) 702, 1029, 2473, 2506
BtrI CACGTC 2 cut(s) 1442, 3340
BtsCI GGATG 9 cut(s) 157, 180, 277, 1389, 1528, 1554, 1657, 2923, 3375
BtsI GCAGTG 2 cut(s) 314, 1844
BtsIMutI CAGTG 6 cut(s) 50, 314, 1339, 1830, 1844, 2434
BveI ACCTGC 2 cut(s) 1276, 2209
Cac8I GCNNGC 4 cut(s) 1703, 2176, 2246, 3238
CaiI CAGNNNCTG 1 cut(s) 2983
CciI TCATGA 1 cut(s) 2892
Cfr13I GGNCC 1 cut(s) 2921
CseI GACGC 3 cut(s) 812, 1349, 1974
Csp6I GTAC 5 cut(s) 557, 2101, 2321, 3171, 3183
CspCI CAANNNNNGTGG 2 cut(s) 687, 722
CviQI GTAC 5 cut(s) 557, 2101, 2321, 3171, 3183
DdeI CTNAG 9 cut(s) 42, 65, 910, 1055, 1669, 1816, 1823, 1955, 2870
DpnI GATC 9 cut(s) 345, 750, 816, 899, 1775, 1821, 2387, 3107, 3332
DpnII GATC 9 cut(s) 343, 748, 814, 897, 1773, 1819, 2385, 3105, 3330
DraI TTTAAA 2 cut(s) 2208, 3138
DrdI GACNNNNNNGTC 1 cut(s) 2593
DriI GACNNNNNGTC 1 cut(s) 1345
DseDI GACNNNNNNGTC 1 cut(s) 2593
EaeI YGGCCR 3 cut(s) 471, 1572, 1600
Eam1104I CTCTTC 2 cut(s) 396, 2999
Eam1105I GACNNNNNGTC 1 cut(s) 1345
EarI CTCTTC 2 cut(s) 396, 2999
EciI GGCGGA 1 cut(s) 2408
Ecl136II GAGCTC 1 cut(s) 12
Eco105I TACGTA 1 cut(s) 2693
Eco130I CCWWGG 4 cut(s) 157, 702, 1029, 2964
Eco24I GRGCYC 2 cut(s) 14, 862
Eco31I GGTCTC 2 cut(s) 1178, 2651
Eco32I GATATC 1 cut(s) 2073
Eco47I GGWCC 1 cut(s) 2921
Eco53kI GAGCTC 1 cut(s) 12
Eco57I CTGAAG 3 cut(s) 55, 149, 321
Eco88I CYCGRG 2 cut(s) 7, 2492
Eco91I GGTNACC 2 cut(s) 2221, 2468
EcoICRI GAGCTC 1 cut(s) 12
EcoNI CCTNNNNNAGG 1 cut(s) 2492
EcoO65I GGTNACC 2 cut(s) 2221, 2468
EcoRI GAATTC 1 cut(s) 951
EcoRII CCWGG 2 cut(s) 215, 2680
EcoRV GATATC 1 cut(s) 2073
EcoT14I CCWWGG 4 cut(s) 157, 702, 1029, 2964
EcoT22I ATGCAT 2 cut(s) 533, 1554
EcoT38I GRGCYC 2 cut(s) 14, 862
ErhI CCWWGG 4 cut(s) 157, 702, 1029, 2964
Esp3I CGTCTC 1 cut(s) 1957
FalI AAGNNNNNCTT 6 cut(s) 792, 824, 1096, 1128, 1337, 1369
FaqI GGGAC 1 cut(s) 2291
FauI CCCGC 2 cut(s) 2134, 2799
FauNDI CATATG 2 cut(s) 2802, 2912
FbaI TGATCA 2 cut(s) 748, 2385
FblI GTMKAC 1 cut(s) 1124
FokI GGATG 9 cut(s) 164, 187, 284, 1376, 1535, 1561, 1664, 2930, 3382
FriOI GRGCYC 2 cut(s) 14, 862
FspBI CTAG 5 cut(s) 1158, 1491, 2175, 2589, 3293
GsaI CCCAGC 2 cut(s) 693, 824
GsuI CTGGAG 1 cut(s) 1718
HaeIII GGCC 5 cut(s) 5, 473, 562, 1574, 1602
HapII CCGG 1 cut(s) 2640
HgaI GACGC 3 cut(s) 812, 1349, 1974
Hin1I GRCGYC 1 cut(s) 1341
HincII GTYRAC 1 cut(s) 1447
HindII GTYRAC 1 cut(s) 1447
HindIII AAGCTT 4 cut(s) 1503, 1703, 1881, 1943
HpaII CCGG 1 cut(s) 2640
HphI GGTGA 7 cut(s) 89, 731, 991, 1627, 2462, 2681, 2746
Hpy166II GTNNAC 5 cut(s) 224, 442, 722, 1125, 1447
Hpy188I TCNGA 8 cut(s) 90, 301, 511, 847, 1069, 2300, 3004, 3265
Hpy8I GTNNAC 5 cut(s) 224, 442, 722, 1125, 1447
Hpy99I CGWCG 4 cut(s) 1343, 1443, 3338, 3341
HpyAV CCTTC 7 cut(s) 36, 85, 397, 1101, 1529, 2498, 2828
HpyCH4III ACNGT 8 cut(s) 1334, 2056, 2227, 2474, 2507, 2751, 3120, 3324
HpyCH4IV ACGT 8 cut(s) 1441, 1695, 2256, 2692, 2853, 3036, 3142, 3339
HpyF10VI GCNNNNNNNGC 4 cut(s) 1190, 1698, 1833, 2907
HpyF3I CTNAG 9 cut(s) 42, 65, 910, 1055, 1669, 1816, 1823, 1955, 2870
HpySE526I ACGT 8 cut(s) 1441, 1695, 2256, 2692, 2853, 3036, 3142, 3339
Hsp92I GRCGYC 1 cut(s) 1341
Ksp22I TGATCA 2 cut(s) 748, 2385
Kzo9I GATC 9 cut(s) 343, 748, 814, 897, 1773, 1819, 2385, 3105, 3330
LmnI GCTCC 6 cut(s) 17, 43, 579, 838, 2656, 2932
Lsp1109I GCAGC 9 cut(s) 442, 594, 646, 1253, 1352, 2125, 2135, 3189, 3288
LweI GCATC 6 cut(s) 418, 1066, 1539, 1642, 2224, 2440
MaeI CTAG 5 cut(s) 1158, 1491, 2175, 2589, 3293
MaeII ACGT 8 cut(s) 1441, 1695, 2256, 2692, 2853, 3036, 3142, 3339
MaeIII GTNAC 7 cut(s) 1334, 1486, 1970, 2221, 2434, 2468, 3344
MalI GATC 9 cut(s) 345, 750, 816, 899, 1775, 1821, 2387, 3107, 3332
MbiI CCGCTC 1 cut(s) 3351
MboI GATC 9 cut(s) 343, 748, 814, 897, 1773, 1819, 2385, 3105, 3330
MfeI CAATTG 2 cut(s) 204, 3026
MflI RGATCY 5 cut(s) 343, 814, 897, 1773, 1819
MhlI GDGCHC 8 cut(s) 14, 226, 862, 1207, 1480, 3209, 3242, 3317
MlsI TGGCCA 3 cut(s) 473, 1574, 1602
MluNI TGGCCA 3 cut(s) 473, 1574, 1602
MlyI GAGTC 6 cut(s) 1869, 1913, 2517, 2785, 2883, 2956
MmeI TCCRAC 3 cut(s) 2007, 2610, 3313
Mox20I TGGCCA 3 cut(s) 473, 1574, 1602
Mph1103I ATGCAT 2 cut(s) 533, 1554
MroXI GAANNNNTTC 1 cut(s) 2878
MscI TGGCCA 3 cut(s) 473, 1574, 1602
MslI CAYNNNNRTG 4 cut(s) 717, 1893, 2505, 3225
Msp20I TGGCCA 3 cut(s) 473, 1574, 1602
MspCI CTTAAG 1 cut(s) 2699
MspI CCGG 1 cut(s) 2640
MspR9I CCNGG 3 cut(s) 217, 2641, 2682
MssI GTTTAAAC 1 cut(s) 2208
MunI CAATTG 2 cut(s) 204, 3026
Mva1269I GAATGC 3 cut(s) 1586, 2176, 2246
MvaI CCWGG 2 cut(s) 217, 2682
MwoI GCNNNNNNNGC 4 cut(s) 1190, 1698, 1833, 2907
NciI CCSGG 1 cut(s) 2641
NcoI CCATGG 2 cut(s) 702, 1029
NdeI CATATG 2 cut(s) 2802, 2912
NdeII GATC 9 cut(s) 343, 748, 814, 897, 1773, 1819, 2385, 3105, 3330
NheI GCTAGC 1 cut(s) 2174
NlaIV GGNNCC 2 cut(s) 345, 2041
NmuCI GTSAC 3 cut(s) 1334, 2434, 2468
NsiI ATGCAT 2 cut(s) 533, 1554
NspI RCATGY 1 cut(s) 716
PacI TTAATTAA 1 cut(s) 2484
PaeR7I CTCGAG 2 cut(s) 7, 2492
PagI TCATGA 1 cut(s) 2892
PciI ACATGT 1 cut(s) 712
PcsI WCGNNNNNNNCGW 1 cut(s) 1692
PctI GAATGC 3 cut(s) 1586, 2176, 2246
PdmI GAANNNNTTC 1 cut(s) 2878
PfeI GAWTC 8 cut(s) 212, 286, 491, 602, 1460, 1951, 2543, 2937
PflFI GACNNNGTC 1 cut(s) 2354
PflMI CCANNNNNTGG 2 cut(s) 1030, 2983
PleI GAGTC 6 cut(s) 1869, 1912, 2517, 2784, 2883, 2955
PmeI GTTTAAAC 1 cut(s) 2208
PpsI GAGTC 6 cut(s) 1869, 1912, 2517, 2784, 2883, 2955
Ppu21I YACGTR 1 cut(s) 2693
PscI ACATGT 1 cut(s) 712
PsiI TTATAA 2 cut(s) 336, 905
Psp124BI GAGCTC 1 cut(s) 14
Psp1406I AACGTT 2 cut(s) 1695, 2256
Psp6I CCWGG 2 cut(s) 215, 2680
PspEI GGTNACC 2 cut(s) 2221, 2468
PspFI CCCAGC 2 cut(s) 689, 820
PspGI CCWGG 2 cut(s) 215, 2680
PspN4I GGNNCC 2 cut(s) 345, 2041
PspPI GGNCC 1 cut(s) 2921
PspXI VCTCGAGB 1 cut(s) 7
PstNI CAGNNNCTG 1 cut(s) 2983
PsuI RGATCY 5 cut(s) 343, 814, 897, 1773, 1819
PsyI GACNNNGTC 1 cut(s) 2354
RsaI GTAC 5 cut(s) 558, 2102, 2322, 3172, 3184
RsaNI GTAC 5 cut(s) 557, 2101, 2321, 3171, 3183
RseI CAYNNNNRTG 4 cut(s) 717, 1893, 2505, 3225
SacI GAGCTC 1 cut(s) 14
Sau3AI GATC 9 cut(s) 343, 748, 814, 897, 1773, 1819, 2385, 3105, 3330
Sau96I GGNCC 1 cut(s) 2921
ScaI AGTACT 1 cut(s) 3184
SchI GAGTC 6 cut(s) 1869, 1913, 2517, 2785, 2883, 2956
ScrFI CCNGG 3 cut(s) 217, 2641, 2682
SduI GDGCHC 8 cut(s) 14, 226, 862, 1207, 1480, 3209, 3242, 3317
SfaNI GCATC 6 cut(s) 418, 1066, 1539, 1642, 2224, 2440
SfcI CTRYAG 1 cut(s) 1593
Sfr274I CTCGAG 2 cut(s) 7, 2492
SinI GGWCC 1 cut(s) 2921
SlaI CTCGAG 2 cut(s) 7, 2492
SmiMI CAYNNNNRTG 4 cut(s) 717, 1893, 2505, 3225
SmlI CTYRAG 7 cut(s) 7, 1253, 1946, 2064, 2492, 2525, 2699
SmoI CTYRAG 7 cut(s) 7, 1253, 1946, 2064, 2492, 2525, 2699
SnaBI TACGTA 1 cut(s) 2693
SsiI CCGC 8 cut(s) 577, 812, 2141, 2331, 2393, 2741, 2806, 3349
SspMI CTAG 5 cut(s) 1158, 1491, 2175, 2589, 3293
SstI GAGCTC 1 cut(s) 14
StyD4I CCNGG 3 cut(s) 215, 2639, 2680
StyI CCWWGG 4 cut(s) 157, 702, 1029, 2964
TaaI ACNGT 8 cut(s) 1334, 2056, 2227, 2474, 2507, 2751, 3120, 3324
TaiI ACGT 8 cut(s) 1444, 1698, 2259, 2695, 2856, 3039, 3145, 3342
TatI WGTACW 3 cut(s) 2100, 3170, 3182
TauI GCSGC 1 cut(s) 2334
TfiI GAWTC 8 cut(s) 212, 286, 491, 602, 1460, 1951, 2543, 2937
TscAI CASTG 6 cut(s) 50, 321, 1339, 1837, 1851, 2434
TseFI GTSAC 3 cut(s) 1334, 2434, 2468
TseI GCWGC 9 cut(s) 455, 582, 659, 1241, 1365, 2138, 2148, 3177, 3276
Tsp45I GTSAC 3 cut(s) 1334, 2434, 2468
TspGWI ACGGA 3 cut(s) 1382, 1674, 1897
TspRI CASTG 6 cut(s) 50, 321, 1339, 1837, 1851, 2434
Tth111I GACNNNGTC 1 cut(s) 2354
Van91I CCANNNNNTGG 2 cut(s) 1030, 2983
Vha464I CTTAAG 1 cut(s) 2699
VneI GTGCAC 1 cut(s) 222
VpaK11BI GGWCC 1 cut(s) 2921
XagI CCTNNNNNAGG 1 cut(s) 2492
XapI RAATTY 7 cut(s) 596, 951, 1047, 1219, 1985, 2005, 2014
XceI RCATGY 1 cut(s) 716
XhoI CTCGAG 2 cut(s) 7, 2492
XmiI GTMKAC 1 cut(s) 1124
XmnI GAANNNNTTC 1 cut(s) 2878
XspI CTAG 5 cut(s) 1158, 1491, 2175, 2589, 3293
ZrmI AGTACT 1 cut(s) 3184
Zsp2I ATGCAT 2 cut(s) 533, 1554
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.