Rmu_sc0006792.1_g000026

Disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006792.1
OG0000085
Physical Location & Seq
Forward (+)
105271 .. 113877
8607 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006792.1_g000026.1.cds

Sequence Viewer

Length: 5679 bp
atggactcccctcgaaaatcgcacgaacatgctgcttttggccatccatcacaaacaggctcagtacaggatgcttgtggtcgtcctccattagcagcagatgttcgtggtccttctaaaaaagcaagaaaagcagcaggtcctcccttagcagctgatgatgatgctaataatgcaagaaaagcatcagcaagtcctccgttagcagctgatgatgatactaataatgcaagaaaagcatctactaatgtaagaaaagtatctcttgctcgtttccgtgctcgtcgtcgttttcggatggacaaattgcctccagcaagtcctccgttagcagctgatgaatcatctactaatgcaagaaacgcatctcttgctcgtttccttgctcctccgcctctatcaattcctccgttagcaactgatgatgatgctaataatgcaagaaaagcatctcttgatcgtttccttgctcgtcgtcgtctatcaattcctccgttagcaactgatgatgatgctaataatgcaagaaaagcatctcttgatcgtttccttgctggtcgtcgttttctgatggacaaagagcctccagcaagtcctccgttagcagctgttgcatcatctactaatgcaagaaaagcatctcttgctcgtcgtcgttttcggatagacaaagagcctccaccaccagttcctcgtcggatggacaaagagcctgcatttgatcctccatcatcagcatctcctcctcggtggtatgatgtgattttgagttgcaggcatgatgacactccaacgaatttcatatccgatttataccatcggctgcgagagaggggaattacaacacttgatgtatcatattttcaagtaggggatcctatttctccctctctccggaaggatgattcagatcttcaagtaggggatgatgtttctccctctctccggaaggatgattcagatcttcaagtaggggatggtgtttctccctctctccggaaggatgattcagatcttcaagtaggggatgatcatctattaggggatgatgtttataccgttttcctaaagataattggaggatcaaggttcgcaattgttgtcctgtccaaaaattatgcttcttctcctgctcggtgtttggagcaacttacagagatttgtcagttcatgaaggacggccccacaattcttccagttttttatcatgtcgacccaactgatgtaaaatatcaaaaggggagttttcaagatgctttcaccaaacatgaaaggtctgggcgatatgatccgcagaaggtgaagcagtggagagatgctttaaactatgtgggcagtttgcctgggtggcttgcacaggatttcaagtctgacaaagatcttgtcgaagccattgtggaatctgtgtacagtaaactacaatctgttgtgaaaatggaaatcaacacgggagattttgaagcaacgaggcaatccactattgaaattgaacctacaatctctcgaaaaactgctgtgtctcttccttcatcagctgaaccatcatcaacagctcgtcgctggaagtatgacgtgtttttgagtttcaggggtactgactttctaaggggttttccgtcccatttatactatcagctgcaagagaggggaatcacaacattcatggatgactcagatcttgaagcagcggatgatatgtctccctctctcctagaggcaattgaaggatcaaggctcgcaattgttgttctgacttcaaattatgcttcttctgctcggtgtttggagcaacttacaaagatctgtcagatcatggaggacggcaccagaattcttccatttttttatcacgtcgaccccactgatgtaatagatcaaaatgggagttttcaagatgctttcaccaagcatgaaaggtctgggcgatacaggtcggaggaggtccagcagtggagagatgctttaagaaaagtgggcggtttgcctgggttggatacacgggattacagggctcggagagatgttttcgaagccatgttggaatatatgtgctataaagtacaatctggtgtggaaattgaagaagcacaatctgtcatagcccatttgcaatctgcgcgttataaagtacaatctggtgtggaaatcgaaaaagtacaacctattgaaatcaatactggaggtcttgaagtatttgatgaaacagatgatgatgaggtcagtgccgttggggtctacggaatgggaggcgcagccaagataaccttgaaaaaaccgttggagtcttcttcatcatcagctgttgagtggaagtatgatgtgtatttgagtttcaggggtatagatattggaaggggttttacatccgatttatacgattggctaaaaaggagaggaatcaatgcattcatggatgaaccagatcttctagtatgggatactatttctggcgcgcttgtaaaggcaattgaagaatcaaggtttgcaatcattgttctctcgcgagactacgcttcttctacttggtgtttggatgaacttacaaaaatctgtgagtgcatggaagatcagaacagaattcttccagttttttataatgtggaaccctctgatgtacggtaccggaagaggagtttcagagaagcttttgataagcatgaaagctctgggcgacacacaccagacaaagtgaagcgctggaaagatgttttagaccatgtagccagtctctctggttggcatacaaagctttacaagactgatagagaacttgtggatgatattgtggattttgtgtgcggtaaagtacaccctattgaaactgagtttacaatgtccaccggagattttgaagcatttgaatcaacaagaagagccatgaatgacgttatgaaggcgcttacagatgatgaggtcactgctgttggggtctatggaaagggaggcgttggaaaaacaaccatggttgaacatgtcagtgaagcagttaagaataatgggatgttccgtcatgtgatcagggttgttgtatccaaaagccctgacttgagaaaaattcaaggcacattggcagacctattgggtgttgaattggaggaggagacagaaattcgaagatcccttagattgatgcagaagataaggagaggaaataggatccttttaatcttggatgacatttgggagagaatagatttgtccaacataggaattcccagcttccatgagcttcaaagatgcaattccaaagtcctactcacaacaaggacacataatgtttgtcgtgccatgaagtgtcaatcaaacatttctcttgatgttttatcagaagaagattcttggaccttgtttgtgaacaaagcaaaaaagtcttttgagtctatcaatttttataatgttgcaagggaggtagctagagaatgtgctggtcttccagttgtgctgatagcagttgcgaaggcacttggtgataagtgtttgtttgactgggaggaagcagctcgacgattaagggcttctcaagttgccaaccctgaagatgggaaaattgtgttcaattgtataaaattgagctatgattacttaaaatctgatgatgccaggtcatgcttcttgctttgttgcctattcccagaagactacgatatccaaattgaagacttgctaaaatatgggatggggaagggattgtttcaagattccagcacaatgcatgatgccagagatcgtgcatattcggtggtcgagtaccttaaagattgtagcttgcttttgaaatctgaacaggacggatgtgtaaagatgcaggatgtcattcgggatgtggcgatactaattgctgaggatggccctctgtatttagtaaaagctggttgtcaattaagggaatggccaaatatgggcgcacaagaaggctactctgctatttcagtaattaggaataaaatttgcaagcttcctgaagagttggtatgttcgaaactccgtattttgtttatgcaaagtaatgtttacttggatgagatcccaaaacatttctttcaacgtttgaatgagttgagggtattagatctaagccgaaccggaatttcgttactgcccacatcattcaatctcttgatgaacctccacaccttgtatcttgatggttgtttatcaatcataaatgacatatctgtacttggatatttagaaaaacttgatattcttagtatgagagaccttcctctggtggaattgccgaaagaaataggacatctgagtaatctaaggatgttggacatcactggtgaatatgttgatatagttccctctgaagtgatttgcaaccttcataggttagaagaattatacatgcagtgtaattttgcagactggaggagtaaagttgggagtaatgaagtgaatgagagaaaagttgaggaagcaggggaagaaaatattgctgcctttgatgagttaactagcttgtcatgtttaaacattttgaaggttttcatatctgatgcaaagtgtttgcctaaagatatgaaggttgagccaaattggggaagttttgatatttgtatcagcagagacccatcaatcagaaaagtgtccttggtttcaagttcttcacccgcttatacaagagctttgactcttggtacaaccatcaaagccttaccgagttggtttatcaatgtggtgacaaggaaagcagagaagctacagtacataatgtgttggggattagataacattcttgtggaatatgaccgtgggagattacatgcactgaagtatttctctgttattgggcccagtgagaccttgaaagtcttgatgaacacaaaaacacaggatccaaatgaacctgtgtttcagtacttagatcgaaatgaacctgtgtttccgaacttagaagagttgcatctcgttcaactggatagcctgaaggagttatgtgttggtgaattaccacttgggtctctatgcaatcttaggttattgaaggttaaacattgttatgaattggtggatgtacttctatcgtcacaattgctgcatagattacagaatctggaaacactgatttgtgaagagatggatgaattggaatatgtttttggatgtgaagggattaagccagaacatattattttgacagaattgaaagagatgagattggaaaaactagggaaactaataatgatatggaatggtcctgctcctcgtgccattttccaaaaccttcagagtttggtagtttcaggatgctttgaattggaaaatctcttcacagctgatgtagctcagtgtcttttgcaattggaagacctttcagtagagcgttgcccattattggacagagttattaaggcaagcaaggaaacaatagacagcaagattgtttttccaaaactgaagaacttagctttgataaagctaccacagctcacaaggttctacggtaatactggaagtgctattgagtgccctttattagaatacttgtatgtggagaggtgcccccagttctcaacatctgacttccacagcaggaacaatgtccaacccagtcatcaacaacatttggacattgtacaaagaagttgcctccaactgatattggaaacactttgtttgagccaaggtgatcaagagttgtggttcactgtcggcatggtagtgtgttaa

Protein Analysis

1892

Amino Acids

213.5

Weight (kDa)

5.54

Isoelectric Point (pI)

49.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000085)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g05721 FvH4_2g05721 FvH4_3g35820 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35920 FvH4_3g38670 FvH4_3g43650 FvH4_3g43650 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44070 FvH4_5g01271 FvH4_5g02970 FvH4_5g02970 FvH4_5g02970 FvH4_5g27640 FvH4_5g27640 FvH4_5g27640 FvH4_6g05393 FvH4_6g52372 FvH4_7g06680 FvH4_7g12671 FvH4_7g13640 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31510
malus_domestica MD09G1227900.v1.1 MD11G1019800.v1.1 MD11G1020500.v1.1
prunus_persica Prupe.1G542800_v2.0.a1 Prupe.1G542800_v2.0.a1
pyrus_communis pycom11g01460 pycom11g01490 pycom11g01530 pycom11g01570 pycom15g35490
rosa_chinensis RchiOBHm_Chr1g0353711 RchiOBHm_Chr3g0473211 RchiOBHm_Chr3g0473291 RchiOBHm_Chr3g0473341 RchiOBHm_Chr3g0473381 RchiOBHm_Chr3g0473391 RchiOBHm_Chr3g0473441 RchiOBHm_Chr3g0473481 RchiOBHm_Chr3g0473531 RchiOBHm_Chr3g0473561 RchiOBHm_Chr3g0473571 RchiOBHm_Chr3g0483491 RchiOBHm_Chr3g0488681 RchiOBHm_Chr5g0059311 RchiOBHm_Chr5g0061291 RchiOBHm_Chr5g0061301 RchiOBHm_Chr5g0061331 RchiOBHm_Chr5g0064081 RchiOBHm_Chr5g0064111 RchiOBHm_Chr5g0064151 RchiOBHm_Chr5g0064171 RchiOBHm_Chr5g0069721 RchiOBHm_Chr5g0069731 RchiOBHm_Chr5g0069741 RchiOBHm_Chr5g0078251 RchiOBHm_Chr5g0078301 RchiOBHm_Chr5g0079511 RchiOBHm_Chr5g0079791 RchiOBHm_Chr5g0079811 RchiOBHm_Chr5g0079861 RchiOBHm_Chr5g0079881 RchiOBHm_Chr5g0080241 RchiOBHm_Chr5g0080281 RchiOBHm_Chr5g0080371 RchiOBHm_Chr5g0080671 RchiOBHm_Chr6g0256601 RchiOBHm_Chr6g0274791 RchiOBHm_Chr7g0221971 RchiOBHm_Chr7g0221981
rosa_laevigata RLG00000002106 RLG00000013523 RLG00000014806 RLG00000024010 RLG00000035451 RLG00000035455 RLG00000035464 RLG00000035705 RLG00000036094 RLG00000036817 RLG00000036825 RLG00000036826 RLG00000036848
rosa_multiflora Rmu_co8200400.1_g000001 Rmu_co8473147.1_g000001 Rmu_sc0000394.1_g000030 Rmu_sc0000555.1_g000030 Rmu_sc0000595.1_g000002 Rmu_sc0000595.1_g000006 Rmu_sc0000595.1_g000029 Rmu_sc0000689.1_g000018 Rmu_sc0000689.1_g000032 Rmu_sc0000689.1_g000041 Rmu_sc0000738.1_g000025 Rmu_sc0000826.1_g000016 Rmu_sc0000908.1_g000016 Rmu_sc0000908.1_g000019 Rmu_sc0000908.1_g000021 Rmu_sc0001208.1_g000087 Rmu_sc0001639.1_g000004 Rmu_sc0002075.1_g000004 Rmu_sc0002075.1_g000009 Rmu_sc0002187.1_g000042 Rmu_sc0002187.1_g000043 Rmu_sc0002187.1_g000060 Rmu_sc0002513.1_g000025 Rmu_sc0002983.1_g000008 Rmu_sc0003012.1_g000004 Rmu_sc0003069.1_g000019 Rmu_sc0003069.1_g000020 Rmu_sc0003069.1_g000047 Rmu_sc0003069.1_g000051 Rmu_sc0003069.1_g000053 Rmu_sc0003131.1_g000014 Rmu_sc0003514.1_g000003 Rmu_sc0003547.1_g000006 Rmu_sc0003547.1_g000008 Rmu_sc0004325.1_g000021 Rmu_sc0004482.1_g000004 Rmu_sc0004482.1_g000022 Rmu_sc0005006.1_g000004 Rmu_sc0005006.1_g000009 Rmu_sc0005006.1_g000010 Rmu_sc0005194.1_g000002 Rmu_sc0005194.1_g000003 Rmu_sc0005834.1_g000002 Rmu_sc0005947.1_g000023 Rmu_sc0006792.1_g000026 Rmu_sc0007612.1_g000001 Rmu_sc0007793.1_g000024 Rmu_sc0007793.1_g000025 Rmu_sc0008050.1_g000015 Rmu_sc0008336.1_g000003 Rmu_sc0010248.1_g000002 Rmu_sc0011921.1_g000001 Rmu_sc0011921.1_g000006 Rmu_sc0012138.1_g000001 Rmu_sc0016164.1_g000015 Rmu_sc0018807.1_g000005 Rmu_sc0030948.1_g000001 Rmu_sc0042587.1_g000001 Rmu_ssc0000170.1_g000020 Rmu_ssc0000170.1_g000026 Rmu_ssc0000170.1_g000029
rosa_roxburghii Rroxscaffold_1G00003040 Rroxscaffold_1G00003080 Rroxscaffold_1G00003430 Rroxscaffold_1G00003490 Rroxscaffold_1G00011370 Rroxscaffold_1G00016780 Rroxscaffold_1G00019390 Rroxscaffold_1G00019400 Rroxscaffold_1G00019420 Rroxscaffold_1G00021170 Rroxscaffold_3G00237530 Rroxscaffold_3G00246470 Rroxscaffold_4G00301730 Rroxscaffold_4G00309300 Rroxscaffold_6G00398250 Rroxscaffold_6G00398270 Rroxscaffold_6G00398280 Rroxscaffold_6G00408070 Rroxscaffold_7G00193940 Rroxscaffold_7G00209570
rosa_rugosa Rorug01G0237100 Rorug03G0098200 Rorug03G0132200 Rorug03G0132400 Rorug03G0132500 Rorug03G0132500 Rorug03G0132500 Rorug03G0132700 Rorug03G0132800 Rorug03G0205900 Rorug03G0206100 Rorug03G0206100 Rorug03G0206300 Rorug03G0206400 Rorug03G0206400 Rorug03G0240700 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug05G0322400 Rorug05G0339300 Rorug05G0339500 Rorug05G0362200 Rorug05G0362300 Rorug05G0362400 Rorug05G0362600 Rorug05G0362700 Rorug05G0362800 Rorug05G0363100 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0459900 Rorug05G0464600 Rorug05G0465000 Rorug05G0465100 Rorug05G0465200 Rorug05G0466000 Rorug05G0466300 Rorug05G0466400 Rorug05G0466500 Rorug05G0466600 Rorug05G0466700 Rorug05G0466700 Rorug05G0466700 Rorug05G0466800 Rorug05G0466900 Rorug05G0468100 Rorug05G0562200 Rorug05G0562300 Rorug06G0084400 Rorug06G0084500 Rorug06G0084500 Rorug06G0084600 Rorug07G0136400 Rorug07G0204500 Rorug07G0204600 Rorug07G0221500
rosa_samantha Rh5CG438200 Rh5CG569900 Rh6AG080700 Rh7CG362800 Rh7DG275900 Rh7DG343100
rosa_wichuraiana Rw0G004790 Rw0G008160 Rw0G008170 Rw0G008200 Rw0G008210 Rw0G012980 Rw0G013670 Rw0G019920 Rw0G020380 Rw0G022790 Rw0G022800 Rw0G023350 Rw1G005530 Rw1G021740 Rw3G013910 Rw3G015980 Rw3G023020 Rw3G023030 Rw3G025580 Rw5G027180 Rw5G037760 Rw5G037770 Rw5G037780 Rw5G037790 Rw5G037810 Rw5G037820 Rw5G039500 Rw5G039520 Rw5G039530 Rw5G039540 Rw5G039550 Rw5G039570 Rw5G039580 Rw5G039610 Rw5G039630 Rw5G039660 Rw5G042590 Rw5G047840 Rw5G048170 Rw5G048400 Rw5G048470 Rw5G048540 Rw6G007030 Rw6G007080 Rw6G007460 Rw6G017430 Rw7G023150 Rw7G023260 Rw7G029260 Rw7G029270 Rw7G030950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 2124, 2595, 3393
Acc36I ACCTGC 1 cut(s) 128
Acc65I GGTACC 1 cut(s) 2619
AccB1I GGYRCC 3 cut(s) 1823, 2619, 5508
AccI GTMKAC 3 cut(s) 1212, 1854, 2235
AccII CGCG 3 cut(s) 2119, 2453, 2503
AccIII TCCGGA 3 cut(s) 894, 945, 996
AciI CCGC 6 cut(s) 392, 1292, 1688, 1977, 2799, 4620
AclI AACGTT 1 cut(s) 4045
AcoI YGGCCR 2 cut(s) 40, 3890
AcsI RAATTY 8 cut(s) 796, 1830, 2577, 3054, 3108, 3210, 3945, 4086
AcuI CTGAAG 7 cut(s) 3555, 3981, 4335, 4799, 4955, 5219, 5426
AdeI CACNNNGTG 1 cut(s) 3467
AfeI AGCGCT 1 cut(s) 2696
AfiI CCNNNNNNNGG 8 cut(s) 894, 945, 996, 3539, 3899, 4228, 4547, 5344
AflIII ACRYGT 2 cut(s) 1572, 2971
AjiI CACGTC 2 cut(s) 1573, 1852
AjnI CCWGG 3 cut(s) 1342, 1984, 3599
AjuI GAANNNNNNNTTGG 6 cut(s) 2261, 2293, 4947, 4979, 5091, 5123
Alw21I GWGCWC 1 cut(s) 283
Alw26I GTCTC 9 cut(s) 1524, 1704, 2499, 2732, 3095, 4212, 4569, 4802, 4974
AlwNI CAGNNNCTG 1 cut(s) 5062
Aor13HI TCCGGA 3 cut(s) 894, 945, 996
Aor51HI AGCGCT 1 cut(s) 2696
AoxI GGCC 5 cut(s) 40, 1180, 3847, 3890, 4799
ApaI GGGCCC 1 cut(s) 4803
ApoI RAATTY 8 cut(s) 796, 1830, 2577, 3054, 3108, 3210, 3945, 4086
ArsI GACNNNNNNTTYG 2 cut(s) 1368, 1400
Asp700I GAANNNNTTC 2 cut(s) 4493, 4784
Asp718I GGTACC 1 cut(s) 2619
AspLEI GCGC 7 cut(s) 2119, 2252, 2453, 2455, 2697, 2899, 3905
AspS9I GGNCC 9 cut(s) 110, 140, 1181, 1942, 3342, 3848, 4799, 4800, 5204
AsuHPI GGTGA 9 cut(s) 1252, 1312, 1894, 3479, 4301, 4608, 4699, 4964, 5648
AsuII TTCGAA 3 cut(s) 2028, 3112, 3977
AvaII GGWCC 5 cut(s) 110, 140, 1942, 3342, 5204
BaeGI GKGCMC 3 cut(s) 4803, 5480, 5513
BalI TGGCCA 2 cut(s) 42, 3892
BamHI GGATCC 3 cut(s) 874, 3156, 4843
BanI GGYRCC 3 cut(s) 1823, 2619, 5508
BanII GRGCYC 2 cut(s) 2014, 4803
BarI GAAGNNNNNNTAC 4 cut(s) 2344, 2376, 4697, 4729
BauI CACGAG 1 cut(s) 5214
BbsI GAAGAC 5 cut(s) 2277, 3422, 3642, 3663, 5322
Bbv12I GWGCWC 1 cut(s) 283
BbvCI CCTCAGC 1 cut(s) 3840
BceAI ACGGC 3 cut(s) 1195, 1837, 2210
BcgI CGANNNNNNTGC 2 cut(s) 14, 48
BciT130I CCWGG 3 cut(s) 1344, 1986, 3601
BciVI GTATCC 3 cut(s) 1987, 2431, 3040
BclI TGATCA 3 cut(s) 1030, 3015, 5638
BcoDI GTCTC 9 cut(s) 1524, 1704, 2499, 2732, 3095, 4212, 4569, 4802, 4974
BfaI CTAG 5 cut(s) 1712, 2429, 3414, 4464, 5177
BfmI CTRYAG 1 cut(s) 4709
BfoI RGCGCY 2 cut(s) 2698, 2900
BfuAI ACCTGC 1 cut(s) 128
BfuI GTATCC 3 cut(s) 1987, 2431, 3040
BglI GCCNNNNNGGC 1 cut(s) 1348
BglII AGATCT 8 cut(s) 910, 961, 1012, 1378, 1675, 1800, 2422, 4069
BmcAI AGTACT 1 cut(s) 4868
Bme1390I CCNGG 3 cut(s) 1344, 1986, 3601
Bme18I GGWCC 5 cut(s) 110, 140, 1942, 3342, 5204
BmgBI CACGTC 2 cut(s) 1573, 1852
BmgT120I GGNCC 9 cut(s) 110, 140, 1181, 1942, 3342, 3848, 4799, 4800, 5204
BmiI GGNNCC 9 cut(s) 876, 1183, 1825, 2604, 2621, 3158, 4801, 4845, 5510
BmrFI CCNGG 3 cut(s) 1344, 1986, 3601
BmrI ACTGGG 4 cut(s) 3496, 4797, 5509, 5553
BmuI ACTGGG 4 cut(s) 3496, 4797, 5509, 5553
BpiI GAAGAC 5 cut(s) 2277, 3422, 3642, 3663, 5322
BpmI CTGGAG 4 cut(s) 297, 570, 2199, 4396
Bpu10I CCTNAGC 2 cut(s) 148, 3840
Bpu14I TTCGAA 3 cut(s) 2028, 3112, 3977
BpuEI CTTGAG 2 cut(s) 3067, 3504
BsaBI GATNNNNATC 4 cut(s) 909, 960, 1011, 1032
BsaI GGTCTC 4 cut(s) 4212, 4569, 4802, 4974
BsaJI CCNNGG 7 cut(s) 746, 1343, 1985, 2961, 4599, 4759, 5632
BsaWI WCCGGW 6 cut(s) 894, 945, 996, 2622, 2840, 4082
Bsc4I CCNNNNNNNGG 8 cut(s) 894, 945, 996, 3539, 3899, 4228, 4547, 5344
Bse8I GATNNNNATC 4 cut(s) 909, 960, 1011, 1032
BseAI TCCGGA 3 cut(s) 894, 945, 996
BseBI CCWGG 3 cut(s) 1344, 1986, 3601
BseDI CCNNGG 7 cut(s) 746, 1343, 1985, 2961, 4599, 4759, 5632
BseJI GATNNNNATC 4 cut(s) 909, 960, 1011, 1032
BseLI CCNNNNNNNGG 8 cut(s) 894, 945, 996, 3539, 3899, 4228, 4547, 5344
BseMII CTCAG 6 cut(s) 75, 1686, 2814, 3831, 4250, 5309
BsePI GCGCGC 1 cut(s) 2451
BseRI GAGGAG 9 cut(s) 378, 732, 735, 1952, 2644, 3110, 3113, 4393, 5202
BseSI GKGCMC 3 cut(s) 4803, 5480, 5513
BseYI CCCAGC 1 cut(s) 3215
Bsh1236I CGCG 3 cut(s) 2119, 2453, 2503
BshFI GGCC 5 cut(s) 42, 1182, 3849, 3892, 4801
BshNI GGYRCC 3 cut(s) 1823, 2619, 5508
BsiHKAI GWGCWC 1 cut(s) 283
BsiSI CCGG 6 cut(s) 895, 946, 997, 2623, 2841, 4083
BslFI GGGAC 1 cut(s) 1603
BslI CCNNNNNNNGG 8 cut(s) 894, 945, 996, 3539, 3899, 4228, 4547, 5344
BsmAI GTCTC 9 cut(s) 1524, 1704, 2499, 2732, 3095, 4212, 4569, 4802, 4974
BsmFI GGGAC 1 cut(s) 1603
BsmI GAATGC 1 cut(s) 2405
BsnI GGCC 5 cut(s) 42, 1182, 3849, 3892, 4801
Bso31I GGTCTC 4 cut(s) 4212, 4569, 4802, 4974
Bsp119I TTCGAA 3 cut(s) 2028, 3112, 3977
Bsp120I GGGCCC 1 cut(s) 4799
Bsp1286I GDGCHC 5 cut(s) 283, 2014, 4803, 5480, 5513
Bsp13I TCCGGA 3 cut(s) 894, 945, 996
Bsp1407I TGTACA 2 cut(s) 1407, 5584
Bsp19I CCATGG 1 cut(s) 2961
Bsp68I TCGCGA 1 cut(s) 2503
BspACI CCGC 6 cut(s) 392, 1292, 1688, 1977, 2799, 4620
BspANI GGCC 5 cut(s) 42, 1182, 3849, 3892, 4801
BspCNI CTCAG 6 cut(s) 74, 1685, 2815, 3832, 4251, 5308
BspEI TCCGGA 3 cut(s) 894, 945, 996
BspFNI CGCG 3 cut(s) 2119, 2453, 2503
BspHI TCATGA 1 cut(s) 1170
BspLI GGNNCC 9 cut(s) 876, 1183, 1825, 2604, 2621, 3158, 4801, 4845, 5510
BspMI ACCTGC 1 cut(s) 128
BspQI GCTCTTC 1 cut(s) 2866
BspT104I TTCGAA 3 cut(s) 2028, 3112, 3977
BspT107I GGYRCC 3 cut(s) 1823, 2619, 5508
BspTNI GGTCTC 4 cut(s) 4212, 4569, 4802, 4974
BsrGI TGTACA 2 cut(s) 1407, 5584
BssECI CCNNGG 7 cut(s) 746, 1343, 1985, 2961, 4599, 4759, 5632
BssHII GCGCGC 1 cut(s) 2451
BssSI CACGAG 1 cut(s) 5214
BssT1I CCWWGG 3 cut(s) 2961, 4599, 5632
Bst2BI CACGAG 1 cut(s) 5214
Bst2UI CCWGG 3 cut(s) 1344, 1986, 3601
Bst4CI ACNGT 8 cut(s) 1060, 1412, 2277, 2619, 4713, 4760, 5453, 5659
Bst6I CTCTTC 7 cut(s) 1527, 2621, 2866, 3957, 4899, 5076, 5282
BstAPI GCANNNNNTGC 3 cut(s) 371, 611, 644
BstAUI TGTACA 2 cut(s) 1407, 5584
BstBI TTCGAA 3 cut(s) 2028, 3112, 3977
BstC8I GCNNGC 8 cut(s) 714, 776, 1353, 1737, 2453, 3767, 3953, 5365
BstDSI CCRYGG 2 cut(s) 2961, 4759
BstFNI CGCG 3 cut(s) 2119, 2453, 2503
BstH2I RGCGCY 2 cut(s) 2698, 2900
BstHHI GCGC 7 cut(s) 2119, 2252, 2453, 2455, 2697, 2899, 3905
BstMAI GTCTC 9 cut(s) 1524, 1704, 2499, 2732, 3095, 4212, 4569, 4802, 4974
BstNI CCWGG 3 cut(s) 1344, 1986, 3601
BstNSI RCATGY 4 cut(s) 32, 2975, 4357, 4775
BstSCI CCNGG 3 cut(s) 1342, 1984, 3599
BstSFI CTRYAG 1 cut(s) 4709
BstSLI GKGCMC 3 cut(s) 4803, 5480, 5513
BstUI CGCG 3 cut(s) 2119, 2453, 2503
BstV2I GAAGAC 5 cut(s) 2277, 3422, 3642, 3663, 5322
BsuI GTATCC 3 cut(s) 1987, 2431, 3040
BsuRI GGCC 5 cut(s) 42, 1182, 3849, 3892, 4801
BtgI CCRYGG 2 cut(s) 2961, 4759
BtrI CACGTC 2 cut(s) 1573, 1852
BtsI GCAGTG 4 cut(s) 1313, 1955, 2916, 4364
BtuMI TCGCGA 1 cut(s) 2503
BveI ACCTGC 1 cut(s) 128
Cac8I GCNNGC 8 cut(s) 714, 776, 1353, 1737, 2453, 3767, 3953, 5365
CaiI CAGNNNCTG 1 cut(s) 5062
CciI TCATGA 1 cut(s) 1170
CfoI GCGC 7 cut(s) 2119, 2252, 2453, 2455, 2697, 2899, 3905
Cfr13I GGNCC 9 cut(s) 110, 140, 1181, 1942, 3342, 3848, 4799, 4800, 5204
CspCI CAANNNNNGTGG 2 cut(s) 5630, 5665
DraI TTTAAA 2 cut(s) 1323, 4479
DraIII CACNNNGTG 1 cut(s) 3467
EaeI YGGCCR 2 cut(s) 40, 3890
Eam1104I CTCTTC 7 cut(s) 1527, 2621, 2866, 3957, 4899, 5076, 5282
EarI CTCTTC 7 cut(s) 1527, 2621, 2866, 3957, 4899, 5076, 5282
EciI GGCGGA 1 cut(s) 381
Eco130I CCWWGG 3 cut(s) 2961, 4599, 5632
Eco24I GRGCYC 2 cut(s) 2014, 4803
Eco31I GGTCTC 4 cut(s) 4212, 4569, 4802, 4974
Eco32I GATATC 1 cut(s) 3646
Eco47I GGWCC 5 cut(s) 110, 140, 1942, 3342, 5204
Eco47III AGCGCT 1 cut(s) 2696
Eco57I CTGAAG 7 cut(s) 3555, 3981, 4335, 4799, 4955, 5219, 5426
EcoO109I RGGNCCY 1 cut(s) 140
EcoRI GAATTC 3 cut(s) 1830, 2577, 3210
EcoRII CCWGG 3 cut(s) 1342, 1984, 3599
EcoRV GATATC 1 cut(s) 3646
EcoT14I CCWWGG 3 cut(s) 2961, 4599, 5632
EcoT22I ATGCAT 2 cut(s) 2407, 3714
EcoT38I GRGCYC 2 cut(s) 2014, 4803
ErhI CCWWGG 3 cut(s) 2961, 4599, 5632
FaqI GGGAC 1 cut(s) 1603
FauI CCCGC 1 cut(s) 4627
FbaI TGATCA 3 cut(s) 1030, 3015, 5638
FblI GTMKAC 3 cut(s) 1212, 1854, 2235
FriOI GRGCYC 2 cut(s) 2014, 4803
FspBI CTAG 5 cut(s) 1712, 2429, 3414, 4464, 5177
GlaI GCGC 7 cut(s) 2118, 2251, 2452, 2454, 2696, 2898, 3904
GsaI CCCAGC 1 cut(s) 3219
GsuI CTGGAG 4 cut(s) 297, 570, 2199, 4396
HaeII RGCGCY 2 cut(s) 2698, 2900
HaeIII GGCC 5 cut(s) 42, 1182, 3849, 3892, 4801
HapII CCGG 6 cut(s) 895, 946, 997, 2623, 2841, 4083
HhaI GCGC 7 cut(s) 2119, 2252, 2453, 2455, 2697, 2899, 3905
Hin6I GCGC 7 cut(s) 2117, 2250, 2451, 2453, 2695, 2897, 3903
HinP1I GCGC 7 cut(s) 2117, 2250, 2451, 2453, 2695, 2897, 3903
HincII GTYRAC 3 cut(s) 1213, 1855, 4461
HindII GTYRAC 3 cut(s) 1213, 1855, 4461
HindIII AAGCTT 3 cut(s) 2643, 2747, 3953
HpaI GTTAAC 1 cut(s) 4461
HpaII CCGG 6 cut(s) 895, 946, 997, 2623, 2841, 4083
HphI GGTGA 9 cut(s) 1252, 1312, 1894, 3479, 4301, 4608, 4699, 4964, 5648
HpyCH4III ACNGT 8 cut(s) 1060, 1412, 2277, 2619, 4713, 4760, 5453, 5659
HpyCH4IV ACGT 4 cut(s) 1572, 1851, 2886, 4045
HpySE526I ACGT 4 cut(s) 1572, 1851, 2886, 4045
HspAI GCGC 7 cut(s) 2117, 2250, 2451, 2453, 2695, 2897, 3903
Kpn2I TCCGGA 3 cut(s) 894, 945, 996
KpnI GGTACC 1 cut(s) 2623
Ksp22I TGATCA 3 cut(s) 1030, 3015, 5638
KspAI GTTAAC 1 cut(s) 4461
LguI GCTCTTC 1 cut(s) 2866
LmnI GCTCC 4 cut(s) 391, 1144, 1786, 5215
MaeI CTAG 5 cut(s) 1712, 2429, 3414, 4464, 5177
MaeII ACGT 4 cut(s) 1572, 1851, 2886, 4045
MaeIII GTNAC 4 cut(s) 2914, 4092, 4687, 5034
MfeI CAATTG 7 cut(s) 1095, 1719, 1740, 2466, 3556, 5039, 5309
MhlI GDGCHC 5 cut(s) 283, 2014, 4803, 5480, 5513
MlsI TGGCCA 2 cut(s) 42, 3892
MluNI TGGCCA 2 cut(s) 42, 3892
MlyI GAGTC 4 cut(s) 1664, 2291, 3386, 4633
Mox20I TGGCCA 2 cut(s) 42, 3892
Mph1103I ATGCAT 2 cut(s) 2407, 3714
MroI TCCGGA 3 cut(s) 894, 945, 996
MroXI GAANNNNTTC 2 cut(s) 4493, 4784
MscI TGGCCA 2 cut(s) 42, 3892
MslI CAYNNNNRTG 5 cut(s) 27, 2976, 4745, 5007, 5669
Msp20I TGGCCA 2 cut(s) 42, 3892
MspA1I CMGCKG 9 cut(s) 155, 209, 335, 608, 1535, 1636, 1688, 2300, 5285
MspI CCGG 6 cut(s) 895, 946, 997, 2623, 2841, 4083
MspR9I CCNGG 3 cut(s) 1344, 1986, 3601
MssI GTTTAAAC 1 cut(s) 4479
MunI CAATTG 7 cut(s) 1095, 1719, 1740, 2466, 3556, 5039, 5309
Mva1269I GAATGC 1 cut(s) 2405
MvaI CCWGG 3 cut(s) 1344, 1986, 3601
MvnI CGCG 3 cut(s) 2119, 2453, 2503
NcoI CCATGG 1 cut(s) 2961
NlaIV GGNNCC 9 cut(s) 876, 1183, 1825, 2604, 2621, 3158, 4801, 4845, 5510
NmuCI GTSAC 3 cut(s) 2914, 4687, 5034
NruI TCGCGA 1 cut(s) 2503
NsiI ATGCAT 2 cut(s) 2407, 3714
NspI RCATGY 4 cut(s) 32, 2975, 4357, 4775
NspV TTCGAA 3 cut(s) 2028, 3112, 3977
PagI TCATGA 1 cut(s) 1170
PauI GCGCGC 1 cut(s) 2451
PciI ACATGT 1 cut(s) 2971
PciSI GCTCTTC 1 cut(s) 2866
PctI GAATGC 1 cut(s) 2405
PdmI GAANNNNTTC 2 cut(s) 4493, 4784
PleI GAGTC 4 cut(s) 1664, 2290, 3385, 4633
PmeI GTTTAAAC 1 cut(s) 4479
PpsI GAGTC 4 cut(s) 1664, 2290, 3385, 4633
PpuMI RGGWCCY 1 cut(s) 140
PscI ACATGT 1 cut(s) 2971
PsiI TTATAA 3 cut(s) 2124, 2595, 3393
Psp1406I AACGTT 1 cut(s) 4045
Psp5II RGGWCCY 1 cut(s) 140
Psp6I CCWGG 3 cut(s) 1342, 1984, 3599
PspFI CCCAGC 1 cut(s) 3215
PspGI CCWGG 3 cut(s) 1342, 1984, 3599
PspN4I GGNNCC 9 cut(s) 876, 1183, 1825, 2604, 2621, 3158, 4801, 4845, 5510
PspOMI GGGCCC 1 cut(s) 4799
PspPI GGNCC 9 cut(s) 110, 140, 1181, 1942, 3342, 3848, 4799, 4800, 5204
PspPPI RGGWCCY 1 cut(s) 140
PstNI CAGNNNCTG 1 cut(s) 5062
PteI GCGCGC 1 cut(s) 2451
PvuII CAGCTG 8 cut(s) 155, 209, 335, 608, 1535, 1636, 2300, 5285
RruI TCGCGA 1 cut(s) 2503
RseI CAYNNNNRTG 5 cut(s) 27, 2976, 4745, 5007, 5669
SalI GTCGAC 2 cut(s) 1211, 1853
SapI GCTCTTC 1 cut(s) 2866
Sau96I GGNCC 9 cut(s) 110, 140, 1181, 1942, 3342, 3848, 4799, 4800, 5204
ScaI AGTACT 1 cut(s) 4868
SchI GAGTC 4 cut(s) 1664, 2291, 3386, 4633
ScrFI CCNGG 3 cut(s) 1344, 1986, 3601
SduI GDGCHC 5 cut(s) 283, 2014, 4803, 5480, 5513
SfcI CTRYAG 1 cut(s) 4709
SfuI TTCGAA 3 cut(s) 2028, 3112, 3977
SinI GGWCC 5 cut(s) 110, 140, 1942, 3342, 5204
SmiMI CAYNNNNRTG 5 cut(s) 27, 2976, 4745, 5007, 5669
SmlI CTYRAG 2 cut(s) 3046, 3519
SmoI CTYRAG 2 cut(s) 3046, 3519
SsiI CCGC 6 cut(s) 392, 1292, 1688, 1977, 2799, 4620
SspI AATATT 1 cut(s) 4441
SspMI CTAG 5 cut(s) 1712, 2429, 3414, 4464, 5177
StyD4I CCNGG 3 cut(s) 1342, 1984, 3599
StyI CCWWGG 3 cut(s) 2961, 4599, 5632
TaaI ACNGT 8 cut(s) 1060, 1412, 2277, 2619, 4713, 4760, 5453, 5659
TaiI ACGT 4 cut(s) 1575, 1854, 2889, 4048
TseFI GTSAC 3 cut(s) 2914, 4687, 5034
Tsp45I GTSAC 3 cut(s) 2914, 4687, 5034
VpaK11BI GGWCC 5 cut(s) 110, 140, 1942, 3342, 5204
XapI RAATTY 8 cut(s) 796, 1830, 2577, 3054, 3108, 3210, 3945, 4086
XceI RCATGY 4 cut(s) 32, 2975, 4357, 4775
XmiI GTMKAC 3 cut(s) 1212, 1854, 2235
XmnI GAANNNNTTC 2 cut(s) 4493, 4784
XspI CTAG 5 cut(s) 1712, 2429, 3414, 4464, 5177
ZrmI AGTACT 1 cut(s) 4868
Zsp2I ATGCAT 2 cut(s) 2407, 3714
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.