Rorug05G0466900

Disease resistance protein

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
64309443 .. 64310105
663 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0466900.1

Sequence Viewer

Length: 336 bp
ATGTTTATTCAACAGGTATCAAGTCTACGCTTATACTTGAGGTTGCCTTTGATTGCCTGCCTTCTATTACGACGTGAATATGTAAAAGCTGGTTTAGCCAAGTTGGAGCATTGGTGCTTTGAAACAACAGATGAGTATGCAGGTTCAGCTTGGATGAACTCAAGCATATTAGGCAAGTCATTGGATTTCTGGTCACATCAAAAACCCAAAAAGACACGTGATGAAATAAGCTATGACCCATTCCCACTAGTATTGTGTAAGCAAGGAAGAAGTAATACATTGCATGTTGCTGCGGAAAATTGTCCGTCTAAATATTTTGGTTGCAACATTATCTAG

Protein Analysis

111

Amino Acids

12.8

Weight (kDa)

8.87

Isoelectric Point (pI)

53.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000085)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g05721 FvH4_2g05721 FvH4_3g35820 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35920 FvH4_3g38670 FvH4_3g43650 FvH4_3g43650 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44070 FvH4_5g01271 FvH4_5g02970 FvH4_5g02970 FvH4_5g02970 FvH4_5g27640 FvH4_5g27640 FvH4_5g27640 FvH4_6g05393 FvH4_6g52372 FvH4_7g06680 FvH4_7g12671 FvH4_7g13640 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31510
malus_domestica MD09G1227900.v1.1 MD11G1019800.v1.1 MD11G1020500.v1.1
prunus_persica Prupe.1G542800_v2.0.a1 Prupe.1G542800_v2.0.a1
pyrus_communis pycom11g01460 pycom11g01490 pycom11g01530 pycom11g01570 pycom15g35490
rosa_chinensis RchiOBHm_Chr1g0353711 RchiOBHm_Chr3g0473211 RchiOBHm_Chr3g0473291 RchiOBHm_Chr3g0473341 RchiOBHm_Chr3g0473381 RchiOBHm_Chr3g0473391 RchiOBHm_Chr3g0473441 RchiOBHm_Chr3g0473481 RchiOBHm_Chr3g0473531 RchiOBHm_Chr3g0473561 RchiOBHm_Chr3g0473571 RchiOBHm_Chr3g0483491 RchiOBHm_Chr3g0488681 RchiOBHm_Chr5g0059311 RchiOBHm_Chr5g0061291 RchiOBHm_Chr5g0061301 RchiOBHm_Chr5g0061331 RchiOBHm_Chr5g0064081 RchiOBHm_Chr5g0064111 RchiOBHm_Chr5g0064151 RchiOBHm_Chr5g0064171 RchiOBHm_Chr5g0069721 RchiOBHm_Chr5g0069731 RchiOBHm_Chr5g0069741 RchiOBHm_Chr5g0078251 RchiOBHm_Chr5g0078301 RchiOBHm_Chr5g0079511 RchiOBHm_Chr5g0079791 RchiOBHm_Chr5g0079811 RchiOBHm_Chr5g0079861 RchiOBHm_Chr5g0079881 RchiOBHm_Chr5g0080241 RchiOBHm_Chr5g0080281 RchiOBHm_Chr5g0080371 RchiOBHm_Chr5g0080671 RchiOBHm_Chr6g0256601 RchiOBHm_Chr6g0274791 RchiOBHm_Chr7g0221971 RchiOBHm_Chr7g0221981
rosa_laevigata RLG00000002106 RLG00000013523 RLG00000014806 RLG00000024010 RLG00000035451 RLG00000035455 RLG00000035464 RLG00000035705 RLG00000036094 RLG00000036817 RLG00000036825 RLG00000036826 RLG00000036848
rosa_multiflora Rmu_co8200400.1_g000001 Rmu_co8473147.1_g000001 Rmu_sc0000394.1_g000030 Rmu_sc0000555.1_g000030 Rmu_sc0000595.1_g000002 Rmu_sc0000595.1_g000006 Rmu_sc0000595.1_g000029 Rmu_sc0000689.1_g000018 Rmu_sc0000689.1_g000032 Rmu_sc0000689.1_g000041 Rmu_sc0000738.1_g000025 Rmu_sc0000826.1_g000016 Rmu_sc0000908.1_g000016 Rmu_sc0000908.1_g000019 Rmu_sc0000908.1_g000021 Rmu_sc0001208.1_g000087 Rmu_sc0001639.1_g000004 Rmu_sc0002075.1_g000004 Rmu_sc0002075.1_g000009 Rmu_sc0002187.1_g000042 Rmu_sc0002187.1_g000043 Rmu_sc0002187.1_g000060 Rmu_sc0002513.1_g000025 Rmu_sc0002983.1_g000008 Rmu_sc0003012.1_g000004 Rmu_sc0003069.1_g000019 Rmu_sc0003069.1_g000020 Rmu_sc0003069.1_g000047 Rmu_sc0003069.1_g000051 Rmu_sc0003069.1_g000053 Rmu_sc0003131.1_g000014 Rmu_sc0003514.1_g000003 Rmu_sc0003547.1_g000006 Rmu_sc0003547.1_g000008 Rmu_sc0004325.1_g000021 Rmu_sc0004482.1_g000004 Rmu_sc0004482.1_g000022 Rmu_sc0005006.1_g000004 Rmu_sc0005006.1_g000009 Rmu_sc0005006.1_g000010 Rmu_sc0005194.1_g000002 Rmu_sc0005194.1_g000003 Rmu_sc0005834.1_g000002 Rmu_sc0005947.1_g000023 Rmu_sc0006792.1_g000026 Rmu_sc0007612.1_g000001 Rmu_sc0007793.1_g000024 Rmu_sc0007793.1_g000025 Rmu_sc0008050.1_g000015 Rmu_sc0008336.1_g000003 Rmu_sc0010248.1_g000002 Rmu_sc0011921.1_g000001 Rmu_sc0011921.1_g000006 Rmu_sc0012138.1_g000001 Rmu_sc0016164.1_g000015 Rmu_sc0018807.1_g000005 Rmu_sc0030948.1_g000001 Rmu_sc0042587.1_g000001 Rmu_ssc0000170.1_g000020 Rmu_ssc0000170.1_g000026 Rmu_ssc0000170.1_g000029
rosa_roxburghii Rroxscaffold_1G00003040 Rroxscaffold_1G00003080 Rroxscaffold_1G00003430 Rroxscaffold_1G00003490 Rroxscaffold_1G00011370 Rroxscaffold_1G00016780 Rroxscaffold_1G00019390 Rroxscaffold_1G00019400 Rroxscaffold_1G00019420 Rroxscaffold_1G00021170 Rroxscaffold_3G00237530 Rroxscaffold_3G00246470 Rroxscaffold_4G00301730 Rroxscaffold_4G00309300 Rroxscaffold_6G00398250 Rroxscaffold_6G00398270 Rroxscaffold_6G00398280 Rroxscaffold_6G00408070 Rroxscaffold_7G00193940 Rroxscaffold_7G00209570
rosa_rugosa Rorug01G0237100 Rorug03G0098200 Rorug03G0132200 Rorug03G0132400 Rorug03G0132500 Rorug03G0132500 Rorug03G0132500 Rorug03G0132700 Rorug03G0132800 Rorug03G0205900 Rorug03G0206100 Rorug03G0206100 Rorug03G0206300 Rorug03G0206400 Rorug03G0206400 Rorug03G0240700 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug05G0322400 Rorug05G0339300 Rorug05G0339500 Rorug05G0362200 Rorug05G0362300 Rorug05G0362400 Rorug05G0362600 Rorug05G0362700 Rorug05G0362800 Rorug05G0363100 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0459900 Rorug05G0464600 Rorug05G0465000 Rorug05G0465100 Rorug05G0465200 Rorug05G0466000 Rorug05G0466300 Rorug05G0466400 Rorug05G0466500 Rorug05G0466600 Rorug05G0466700 Rorug05G0466700 Rorug05G0466700 Rorug05G0466800 Rorug05G0466900 Rorug05G0468100 Rorug05G0562200 Rorug05G0562300 Rorug06G0084400 Rorug06G0084500 Rorug06G0084500 Rorug06G0084600 Rorug07G0136400 Rorug07G0204500 Rorug07G0204600 Rorug07G0221500
rosa_samantha Rh5CG438200 Rh5CG569900 Rh6AG080700 Rh7CG362800 Rh7DG275900 Rh7DG343100
rosa_wichuraiana Rw0G004790 Rw0G008160 Rw0G008170 Rw0G008200 Rw0G008210 Rw0G012980 Rw0G013670 Rw0G019920 Rw0G020380 Rw0G022790 Rw0G022800 Rw0G023350 Rw1G005530 Rw1G021740 Rw3G013910 Rw3G015980 Rw3G023020 Rw3G023030 Rw3G025580 Rw5G027180 Rw5G037760 Rw5G037770 Rw5G037780 Rw5G037790 Rw5G037810 Rw5G037820 Rw5G039500 Rw5G039520 Rw5G039530 Rw5G039540 Rw5G039550 Rw5G039570 Rw5G039580 Rw5G039610 Rw5G039630 Rw5G039660 Rw5G042590 Rw5G047840 Rw5G048170 Rw5G048400 Rw5G048470 Rw5G048540 Rw6G007030 Rw6G007080 Rw6G007460 Rw6G017430 Rw7G023150 Rw7G023260 Rw7G029260 Rw7G029270 Rw7G030950

Restriction Enzyme Sites

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Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 131
AccI GTMKAC 1 cut(s) 25
AciI CCGC 1 cut(s) 293
AcvI CACGTG 1 cut(s) 218
AflIII ACRYGT 1 cut(s) 215
AgsI TTSAA 2 cut(s) 11, 122
AhlI ACTAGT 1 cut(s) 247
AjiI CACGTC 1 cut(s) 74
AluBI AGCT 3 cut(s) 89, 149, 231
AluI AGCT 3 cut(s) 89, 149, 231
ApeKI GCWGC 1 cut(s) 290
BarI GAAGNNNNNNTAC 2 cut(s) 259, 291
BbrPI CACGTG 1 cut(s) 218
BbvI GCAGC 1 cut(s) 277
BcuI ACTAGT 1 cut(s) 247
BfaI CTAG 2 cut(s) 248, 334
BfuAI ACCTGC 1 cut(s) 131
BisI GCNGC 1 cut(s) 291
BlsI GCNGC 1 cut(s) 292
BmgBI CACGTC 1 cut(s) 74
BpuEI CTTGAG 2 cut(s) 58, 145
BsaAI YACGTR 1 cut(s) 218
BsaXI ACNNNNNCTCC 2 cut(s) 98, 128
Bse3DI GCAATG 1 cut(s) 278
BseGI GGATG 1 cut(s) 159
BseMI GCAATG 1 cut(s) 278
BseXI GCAGC 1 cut(s) 277
BspACI CCGC 1 cut(s) 293
BspMI ACCTGC 1 cut(s) 131
BsrDI GCAATG 1 cut(s) 278
BstBAI YACGTR 1 cut(s) 218
BstC8I GCNNGC 1 cut(s) 58
BstF5I GGATG 1 cut(s) 159
BstMWI GCNNNNNNNGC 3 cut(s) 95, 146, 171
BstNSI RCATGY 1 cut(s) 287
BstV1I GCAGC 1 cut(s) 277
BtrI CACGTC 1 cut(s) 74
BtsCI GGATG 1 cut(s) 159
BveI ACCTGC 1 cut(s) 131
Cac8I GCNNGC 1 cut(s) 58
CspCI CAANNNNNGTGG 2 cut(s) 234, 269
CviAII CATG 1 cut(s) 284
CviJI RGCY 4 cut(s) 89, 98, 149, 231
CviKI_1 RGCY 4 cut(s) 89, 98, 149, 231
Eco72I CACGTG 1 cut(s) 218
FaeI CATG 1 cut(s) 287
FaiI YATR 6 cut(s) 34, 81, 138, 167, 234, 285
FatI CATG 1 cut(s) 283
FblI GTMKAC 1 cut(s) 25
Fnu4HI GCNGC 1 cut(s) 291
FokI GGATG 1 cut(s) 166
Fsp4HI GCNGC 1 cut(s) 291
FspBI CTAG 2 cut(s) 248, 334
GluI GCNGC 1 cut(s) 291
Hin1II CATG 1 cut(s) 287
Hpy166II GTNNAC 1 cut(s) 26
Hpy8I GTNNAC 1 cut(s) 26
Hpy99I CGWCG 1 cut(s) 75
HpyAV CCTTC 1 cut(s) 71
HpyCH4IV ACGT 2 cut(s) 73, 217
HpyCH4V TGCA 3 cut(s) 140, 283, 324
HpyF10VI GCNNNNNNNGC 3 cut(s) 95, 146, 171
HpySE526I ACGT 2 cut(s) 73, 217
Hsp92II CATG 1 cut(s) 287
LmnI GCTCC 1 cut(s) 106
LpnPI CCDG 4 cut(s) 70, 75, 126, 175
Lsp1109I GCAGC 1 cut(s) 277
MaeI CTAG 2 cut(s) 248, 334
MaeII ACGT 2 cut(s) 73, 217
MaeIII GTNAC 1 cut(s) 192
MboII GAAGA 1 cut(s) 279
MluCI AATT 1 cut(s) 298
MmeI TCCRAC 1 cut(s) 84
MnlI CCTC 1 cut(s) 33
MwoI GCNNNNNNNGC 3 cut(s) 95, 146, 171
NlaIII CATG 1 cut(s) 287
NmuCI GTSAC 1 cut(s) 192
NspI RCATGY 1 cut(s) 287
PkrI GCNGC 1 cut(s) 292
PmaCI CACGTG 1 cut(s) 218
PmlI CACGTG 1 cut(s) 218
Ppu21I YACGTR 1 cut(s) 218
PspCI CACGTG 1 cut(s) 218
SatI GCNGC 1 cut(s) 291
SetI ASST 8 cut(s) 18, 44, 76, 91, 145, 151, 220, 233
SmlI CTYRAG 2 cut(s) 37, 160
SmoI CTYRAG 2 cut(s) 37, 160
SpeI ACTAGT 1 cut(s) 247
Sse9I AATT 1 cut(s) 298
SsiI CCGC 1 cut(s) 293
SspI AATATT 1 cut(s) 314
SspMI CTAG 2 cut(s) 248, 334
TaiI ACGT 2 cut(s) 76, 220
TasI AATT 1 cut(s) 298
TseFI GTSAC 1 cut(s) 192
TseI GCWGC 1 cut(s) 290
Tsp45I GTSAC 1 cut(s) 192
TspDTI ATGAA 2 cut(s) 170, 237
TspGWI ACGGA 1 cut(s) 294
XceI RCATGY 1 cut(s) 287
XmiI GTMKAC 1 cut(s) 25
XspI CTAG 2 cut(s) 248, 334
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.