RchiOBHm_Chr5g0064171

Disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000085
Physical Location & Seq
Forward (+)
70025121 .. 70026902
1782 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ34022

Sequence Viewer

Length: 1602 bp
ATGGATGATACAGGGCTCGAAACAGGGAAGCCTATTTCTCCTAGTCTGCTAACAGCAATCAAAGAATCCTGGTCAGCGATCGTTGTCCTGTCACCAAACTATGCTTCTTCATCATGGTGTTTGCATGAATTGGCGATGATTATTGAATGCATGGAAGACAAGAACATGATAGTTCTCCCAATTTTTTACGGCGTGCATCCCTCTGATGTGAGACATCAGACAACGAGTTTTGGAGAAGCATTAACTAGCCACGAAGAAAGATTCGGGGTAGAGGCTGTGAATCGGTGGAGAGCTGCTTTAACAAAAGTTGCCAATCTCTCTGGGTTGGAATCAAAAAAATATGGGTCTGATCAAGAACTTGTTAAAAAGATTGTGGAAACTGTGTGCAGTAAAGTGCGACCTATTGATATAGAGTGGGCAATGTGCACGGGAGATTTTGTTGCATTTGAAGCAACAAGACGAGCCATGGACAACATAACGAGAGCACTTCAACATGATGAGGTCACGACCATTGGAGTCTTCGGAATGGGAGGCGTTGGCAAGACAAGCATGGTGAAGCATGTCGGTGCACAGGCCCAGAAAATTGGGCTTTTTAATCGTGTGATTATGGCTGTTGTATCCCAAACACCCAACTTGAGAAATATTCAAGGCACACTGGCCGATCTGCTGGGCTTAAAATTGCAGGAGGAGACTAATGTTGGAAGAGCCACTAGAATAGTGGCGGAGATATTGAGAGGATATAAGATCCTGATAATCTTGGACGACATTTGGGAGAGAATAGAATTGTCTAGTATCGGAATACCGAACCATACAGAGCTTCAAAAGCGTGGTTCCAAAATCATATTCACCGCTAGGAGATTGAATGTTTGCCATACCATGGAGAACCAAGCAAGCATTCCTCTCCGAGTTTTGTCAGAAGATGATGCTTGGGACCTGTTTGTGAAGAAAGCAAGGAAGTCTTTTGATGAGTCACCCAACTTTTATGATGTAGCGAGGACGGTAGCAAAAGAATGTGCTGGTCTCCCAGTTGCATTGGTAGCAGTTGCAAGGGCACTTGGAGATAAAGACTTATATGATTGGAGAGAAGCAGCTCGACGACTAAAGGCTGCTCAACCTGCCAACTATGAAGATGAGGGAGAGGTGTTCAGATGTATAAAGTTAAGCTATGATTACTTGAAACCTGATGATGACAACATTGCCAAGTCATTCTTCTTGCTTTGCTGTCTATTCCCTGAAGATTTTGATATCGAGGTCGAAGACTTGTTGGTGTATGCAATGGGGAAAGGTATATTTCAAGATGCCCACACAATACAAGAAGCCAGAGCCAAAGCCCATTCGGTGGTCAATTACCTGAAAGCATCTAGCTTGCTTTTGGACAGTGCATACGCCGGATTCGTGAAGATGCATGATGTCATTCGAGATGTAGCCATATCAATTTCATCATTGGAAGATGGCCCACGGTTTTTGGTTAAAGCTGGTTGTGAATTAAGGGATTGGCCAGCGATTAATATTGCACATGAAGGCTACTCTGCAATCTCGCTGATGAGGAATGAAATTCACGAGCTTCCCGAAAAGTTGGGAATTGAGGGTCTTAGATCTTAG

Protein Analysis

533

Amino Acids

59.42

Weight (kDa)

5.65

Isoelectric Point (pI)

45.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 2 - 134 3e-38 TIR domain
TIR_2 PF13676 2 - 67 1.8e-06 TIR domain
NB-ARC PF00931 155 - 319 8.3e-30 NB-ARC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000085)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g05721 FvH4_2g05721 FvH4_3g35820 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35920 FvH4_3g38670 FvH4_3g43650 FvH4_3g43650 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44070 FvH4_5g01271 FvH4_5g02970 FvH4_5g02970 FvH4_5g02970 FvH4_5g27640 FvH4_5g27640 FvH4_5g27640 FvH4_6g05393 FvH4_6g52372 FvH4_7g06680 FvH4_7g12671 FvH4_7g13640 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31510
malus_domestica MD09G1227900.v1.1 MD11G1019800.v1.1 MD11G1020500.v1.1
prunus_persica Prupe.1G542800_v2.0.a1 Prupe.1G542800_v2.0.a1
pyrus_communis pycom11g01460 pycom11g01490 pycom11g01530 pycom11g01570 pycom15g35490
rosa_chinensis RchiOBHm_Chr1g0353711 RchiOBHm_Chr3g0473211 RchiOBHm_Chr3g0473291 RchiOBHm_Chr3g0473341 RchiOBHm_Chr3g0473381 RchiOBHm_Chr3g0473391 RchiOBHm_Chr3g0473441 RchiOBHm_Chr3g0473481 RchiOBHm_Chr3g0473531 RchiOBHm_Chr3g0473561 RchiOBHm_Chr3g0473571 RchiOBHm_Chr3g0483491 RchiOBHm_Chr3g0488681 RchiOBHm_Chr5g0059311 RchiOBHm_Chr5g0061291 RchiOBHm_Chr5g0061301 RchiOBHm_Chr5g0061331 RchiOBHm_Chr5g0064081 RchiOBHm_Chr5g0064111 RchiOBHm_Chr5g0064151 RchiOBHm_Chr5g0064171 RchiOBHm_Chr5g0069721 RchiOBHm_Chr5g0069731 RchiOBHm_Chr5g0069741 RchiOBHm_Chr5g0078251 RchiOBHm_Chr5g0078301 RchiOBHm_Chr5g0079511 RchiOBHm_Chr5g0079791 RchiOBHm_Chr5g0079811 RchiOBHm_Chr5g0079861 RchiOBHm_Chr5g0079881 RchiOBHm_Chr5g0080241 RchiOBHm_Chr5g0080281 RchiOBHm_Chr5g0080371 RchiOBHm_Chr5g0080671 RchiOBHm_Chr6g0256601 RchiOBHm_Chr6g0274791 RchiOBHm_Chr7g0221971 RchiOBHm_Chr7g0221981
rosa_laevigata RLG00000002106 RLG00000013523 RLG00000014806 RLG00000024010 RLG00000035451 RLG00000035455 RLG00000035464 RLG00000035705 RLG00000036094 RLG00000036817 RLG00000036825 RLG00000036826 RLG00000036848
rosa_multiflora Rmu_co8200400.1_g000001 Rmu_co8473147.1_g000001 Rmu_sc0000394.1_g000030 Rmu_sc0000555.1_g000030 Rmu_sc0000595.1_g000002 Rmu_sc0000595.1_g000006 Rmu_sc0000595.1_g000029 Rmu_sc0000689.1_g000018 Rmu_sc0000689.1_g000032 Rmu_sc0000689.1_g000041 Rmu_sc0000738.1_g000025 Rmu_sc0000826.1_g000016 Rmu_sc0000908.1_g000016 Rmu_sc0000908.1_g000019 Rmu_sc0000908.1_g000021 Rmu_sc0001208.1_g000087 Rmu_sc0001639.1_g000004 Rmu_sc0002075.1_g000004 Rmu_sc0002075.1_g000009 Rmu_sc0002187.1_g000042 Rmu_sc0002187.1_g000043 Rmu_sc0002187.1_g000060 Rmu_sc0002513.1_g000025 Rmu_sc0002983.1_g000008 Rmu_sc0003012.1_g000004 Rmu_sc0003069.1_g000019 Rmu_sc0003069.1_g000020 Rmu_sc0003069.1_g000047 Rmu_sc0003069.1_g000051 Rmu_sc0003069.1_g000053 Rmu_sc0003131.1_g000014 Rmu_sc0003514.1_g000003 Rmu_sc0003547.1_g000006 Rmu_sc0003547.1_g000008 Rmu_sc0004325.1_g000021 Rmu_sc0004482.1_g000004 Rmu_sc0004482.1_g000022 Rmu_sc0005006.1_g000004 Rmu_sc0005006.1_g000009 Rmu_sc0005006.1_g000010 Rmu_sc0005194.1_g000002 Rmu_sc0005194.1_g000003 Rmu_sc0005834.1_g000002 Rmu_sc0005947.1_g000023 Rmu_sc0006792.1_g000026 Rmu_sc0007612.1_g000001 Rmu_sc0007793.1_g000024 Rmu_sc0007793.1_g000025 Rmu_sc0008050.1_g000015 Rmu_sc0008336.1_g000003 Rmu_sc0010248.1_g000002 Rmu_sc0011921.1_g000001 Rmu_sc0011921.1_g000006 Rmu_sc0012138.1_g000001 Rmu_sc0016164.1_g000015 Rmu_sc0018807.1_g000005 Rmu_sc0030948.1_g000001 Rmu_sc0042587.1_g000001 Rmu_ssc0000170.1_g000020 Rmu_ssc0000170.1_g000026 Rmu_ssc0000170.1_g000029
rosa_roxburghii Rroxscaffold_1G00003040 Rroxscaffold_1G00003080 Rroxscaffold_1G00003430 Rroxscaffold_1G00003490 Rroxscaffold_1G00011370 Rroxscaffold_1G00016780 Rroxscaffold_1G00019390 Rroxscaffold_1G00019400 Rroxscaffold_1G00019420 Rroxscaffold_1G00021170 Rroxscaffold_3G00237530 Rroxscaffold_3G00246470 Rroxscaffold_4G00301730 Rroxscaffold_4G00309300 Rroxscaffold_6G00398250 Rroxscaffold_6G00398270 Rroxscaffold_6G00398280 Rroxscaffold_6G00408070 Rroxscaffold_7G00193940 Rroxscaffold_7G00209570
rosa_rugosa Rorug01G0237100 Rorug03G0098200 Rorug03G0132200 Rorug03G0132400 Rorug03G0132500 Rorug03G0132500 Rorug03G0132500 Rorug03G0132700 Rorug03G0132800 Rorug03G0205900 Rorug03G0206100 Rorug03G0206100 Rorug03G0206300 Rorug03G0206400 Rorug03G0206400 Rorug03G0240700 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug05G0322400 Rorug05G0339300 Rorug05G0339500 Rorug05G0362200 Rorug05G0362300 Rorug05G0362400 Rorug05G0362600 Rorug05G0362700 Rorug05G0362800 Rorug05G0363100 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0459900 Rorug05G0464600 Rorug05G0465000 Rorug05G0465100 Rorug05G0465200 Rorug05G0466000 Rorug05G0466300 Rorug05G0466400 Rorug05G0466500 Rorug05G0466600 Rorug05G0466700 Rorug05G0466700 Rorug05G0466700 Rorug05G0466800 Rorug05G0466900 Rorug05G0468100 Rorug05G0562200 Rorug05G0562300 Rorug06G0084400 Rorug06G0084500 Rorug06G0084500 Rorug06G0084600 Rorug07G0136400 Rorug07G0204500 Rorug07G0204600 Rorug07G0221500
rosa_samantha Rh5CG438200 Rh5CG569900 Rh6AG080700 Rh7CG362800 Rh7DG275900 Rh7DG343100
rosa_wichuraiana Rw0G004790 Rw0G008160 Rw0G008170 Rw0G008200 Rw0G008210 Rw0G012980 Rw0G013670 Rw0G019920 Rw0G020380 Rw0G022790 Rw0G022800 Rw0G023350 Rw1G005530 Rw1G021740 Rw3G013910 Rw3G015980 Rw3G023020 Rw3G023030 Rw3G025580 Rw5G027180 Rw5G037760 Rw5G037770 Rw5G037780 Rw5G037790 Rw5G037810 Rw5G037820 Rw5G039500 Rw5G039520 Rw5G039530 Rw5G039540 Rw5G039550 Rw5G039570 Rw5G039580 Rw5G039610 Rw5G039630 Rw5G039660 Rw5G042590 Rw5G047840 Rw5G048170 Rw5G048400 Rw5G048470 Rw5G048540 Rw6G007030 Rw6G007080 Rw6G007460 Rw6G017430 Rw7G023150 Rw7G023260 Rw7G029260 Rw7G029270 Rw7G030950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1123
AccB7I CCANNNNNTGG 2 cut(s) 877, 1339
AciI CCGC 2 cut(s) 722, 849
AclWI GGATC 1 cut(s) 739
AcoI YGGCCR 2 cut(s) 657, 1496
AcsI RAATTY 1 cut(s) 1554
AcuI CTGAAG 1 cut(s) 1254
AfiI CCNNNNNNNGG 2 cut(s) 877, 1339
AgsI TTSAA 8 cut(s) 146, 449, 491, 647, 821, 862, 1177, 1295
AjnI CCWGG 1 cut(s) 68
AjuI GAANNNNNNNTTGG 8 cut(s) 88, 120, 827, 859, 879, 911, 1193, 1225
AluBI AGCT 7 cut(s) 293, 817, 1091, 1164, 1365, 1475, 1564
AluI AGCT 7 cut(s) 293, 817, 1091, 1164, 1365, 1475, 1564
Alw21I GWGCWC 3 cut(s) 428, 487, 571
Alw26I GTCTC 3 cut(s) 205, 683, 1025
Alw44I GTGCAC 2 cut(s) 424, 567
AlwI GGATC 1 cut(s) 739
AoxI GGCC 4 cut(s) 573, 657, 1453, 1496
ApaLI GTGCAC 2 cut(s) 424, 567
ApeKI GCWGC 3 cut(s) 293, 1088, 1106
ApoI RAATTY 1 cut(s) 1554
AseI ATTAAT 1 cut(s) 1506
AspS9I GGNCC 3 cut(s) 574, 931, 1454
AsuHPI GGTGA 4 cut(s) 84, 565, 838, 963
AvaII GGWCC 1 cut(s) 931
BaeGI GKGCMC 3 cut(s) 428, 571, 1054
BalI TGGCCA 1 cut(s) 1498
BanII GRGCYC 1 cut(s) 18
BauI CACGAG 1 cut(s) 1559
BbsI GAAGAC 3 cut(s) 162, 511, 1263
Bbv12I GWGCWC 3 cut(s) 428, 487, 571
BbvI GCAGC 3 cut(s) 280, 1093, 1100
BccI CCATC 1 cut(s) 1445
BceAI ACGGC 1 cut(s) 205
BciT130I CCWGG 1 cut(s) 70
BciVI GTATCC 1 cut(s) 628
BclI TGATCA 1 cut(s) 349
BcoDI GTCTC 3 cut(s) 205, 683, 1025
BfaI CTAG 6 cut(s) 42, 246, 711, 789, 852, 1362
BfuAI ACCTGC 1 cut(s) 1123
BfuI GTATCC 1 cut(s) 628
BglII AGATCT 1 cut(s) 1595
BisI GCNGC 3 cut(s) 294, 1089, 1107
BlsI GCNGC 3 cut(s) 295, 1090, 1108
Bme1390I CCNGG 1 cut(s) 70
Bme18I GGWCC 1 cut(s) 931
BmgT120I GGNCC 3 cut(s) 574, 931, 1454
BmiI GGNNCC 2 cut(s) 832, 932
BmrFI CCNGG 1 cut(s) 70
BmrI ACTGGG 1 cut(s) 1019
BmsI GCATC 5 cut(s) 205, 913, 1288, 1367, 1392
BmuI ACTGGG 1 cut(s) 1019
BpiI GAAGAC 3 cut(s) 162, 511, 1263
BpuEI CTTGAG 1 cut(s) 655
BsaI GGTCTC 1 cut(s) 1025
BsaJI CCNNGG 3 cut(s) 465, 876, 1457
BsaXI ACNNNNNCTCC 2 cut(s) 423, 453
Bsc4I CCNNNNNNNGG 2 cut(s) 877, 1339
Bse1I ACTGG 2 cut(s) 660, 1025
Bse3DI GCAATG 3 cut(s) 426, 1194, 1281
BseBI CCWGG 1 cut(s) 70
BseDI CCNNGG 3 cut(s) 465, 876, 1457
BseGI GGATG 2 cut(s) 10, 196
BseLI CCNNNNNNNGG 2 cut(s) 877, 1339
BseMI GCAATG 3 cut(s) 426, 1194, 1281
BseNI ACTGG 2 cut(s) 660, 1025
BseRI GAGGAG 1 cut(s) 701
BseSI GKGCMC 3 cut(s) 428, 571, 1054
BseXI GCAGC 3 cut(s) 280, 1093, 1100
BseYI CCCAGC 1 cut(s) 667
BsgI GTGCAG 1 cut(s) 406
Bsh1285I CGRYCG 1 cut(s) 81
BshFI GGCC 4 cut(s) 575, 659, 1455, 1498
BsiEI CGRYCG 1 cut(s) 81
BsiHKAI GWGCWC 3 cut(s) 428, 487, 571
BsiSI CCGG 1 cut(s) 1389
BslFI GGGAC 1 cut(s) 944
BslI CCNNNNNNNGG 2 cut(s) 877, 1339
BsmAI GTCTC 3 cut(s) 205, 683, 1025
BsmFI GGGAC 1 cut(s) 944
BsmI GAATGC 2 cut(s) 152, 894
BsnI GGCC 4 cut(s) 575, 659, 1455, 1498
Bso31I GGTCTC 1 cut(s) 1025
Bsp1286I GDGCHC 5 cut(s) 18, 428, 487, 571, 1054
Bsp143I GATC 5 cut(s) 78, 349, 661, 744, 1595
Bsp19I CCATGG 2 cut(s) 465, 876
BspACI CCGC 2 cut(s) 722, 849
BspANI GGCC 4 cut(s) 575, 659, 1455, 1498
BspLI GGNNCC 2 cut(s) 832, 932
BspMI ACCTGC 1 cut(s) 1123
BspPI GGATC 1 cut(s) 739
BspQI GCTCTTC 1 cut(s) 697
BspTNI GGTCTC 1 cut(s) 1025
BsrDI GCAATG 3 cut(s) 426, 1194, 1281
BsrI ACTGG 2 cut(s) 660, 1025
BssECI CCNNGG 3 cut(s) 465, 876, 1457
BssMI GATC 5 cut(s) 78, 349, 661, 744, 1595
BssSI CACGAG 1 cut(s) 1559
BssT1I CCWWGG 2 cut(s) 465, 876
Bst2BI CACGAG 1 cut(s) 1559
Bst2UI CCWGG 1 cut(s) 70
Bst4CI ACNGT 4 cut(s) 382, 1000, 1379, 1461
Bst6I CTCTTC 1 cut(s) 697
BstC8I GCNNGC 4 cut(s) 194, 892, 1367, 1500
BstDEI CTNAG 2 cut(s) 1592, 1599
BstDSI CCRYGG 3 cut(s) 465, 876, 1457
BstF5I GGATG 2 cut(s) 10, 196
BstKTI GATC 5 cut(s) 81, 352, 664, 747, 1598
BstMAI GTCTC 3 cut(s) 205, 683, 1025
BstMBI GATC 5 cut(s) 78, 349, 661, 744, 1595
BstMCI CGRYCG 1 cut(s) 81
BstMWI GCNNNNNNNGC 5 cut(s) 449, 546, 823, 1037, 1115
BstNI CCWGG 1 cut(s) 70
BstNSI RCATGY 1 cut(s) 563
BstSCI CCNGG 1 cut(s) 68
BstSLI GKGCMC 3 cut(s) 428, 571, 1054
BstV1I GCAGC 3 cut(s) 280, 1093, 1100
BstV2I GAAGAC 3 cut(s) 162, 511, 1263
BstX2I RGATCY 2 cut(s) 744, 1595
BstXI CCANNNNNNTGG 1 cut(s) 584
BstYI RGATCY 2 cut(s) 744, 1595
BsuI GTATCC 1 cut(s) 628
BsuRI GGCC 4 cut(s) 575, 659, 1455, 1498
BtgI CCRYGG 3 cut(s) 465, 876, 1457
BtgZI GCGATG 1 cut(s) 149
BtsCI GGATG 2 cut(s) 10, 196
BtsIMutI CAGTG 2 cut(s) 653, 1384
BveI ACCTGC 1 cut(s) 1123
Cac8I GCNNGC 4 cut(s) 194, 892, 1367, 1500
Cfr13I GGNCC 3 cut(s) 574, 931, 1454
CspCI CAANNNNNGTGG 2 cut(s) 1446, 1481
DdeI CTNAG 2 cut(s) 1592, 1599
DpnI GATC 5 cut(s) 80, 351, 663, 746, 1597
DpnII GATC 5 cut(s) 78, 349, 661, 744, 1595
EaeI YGGCCR 2 cut(s) 657, 1496
Eam1104I CTCTTC 1 cut(s) 697
EarI CTCTTC 1 cut(s) 697
EciI GGCGGA 1 cut(s) 737
Eco130I CCWWGG 2 cut(s) 465, 876
Eco24I GRGCYC 1 cut(s) 18
Eco31I GGTCTC 1 cut(s) 1025
Eco32I GATATC 1 cut(s) 1246
Eco47I GGWCC 1 cut(s) 931
Eco57I CTGAAG 1 cut(s) 1254
EcoO109I RGGNCCY 1 cut(s) 931
EcoRII CCWGG 1 cut(s) 68
EcoRV GATATC 1 cut(s) 1246
EcoT14I CCWWGG 2 cut(s) 465, 876
EcoT22I ATGCAT 2 cut(s) 152, 1407
EcoT38I GRGCYC 1 cut(s) 18
ErhI CCWWGG 2 cut(s) 465, 876
FalI AAGNNNNNCTT 4 cut(s) 943, 975, 1193, 1225
FaqI GGGAC 1 cut(s) 944
FbaI TGATCA 1 cut(s) 349
Fnu4HI GCNGC 3 cut(s) 294, 1089, 1107
FokI GGATG 2 cut(s) 17, 183
FriOI GRGCYC 1 cut(s) 18
Fsp4HI GCNGC 3 cut(s) 294, 1089, 1107
FspBI CTAG 6 cut(s) 42, 246, 711, 789, 852, 1362
GluI GCNGC 3 cut(s) 294, 1089, 1107
GsaI CCCAGC 1 cut(s) 671
HaeIII GGCC 4 cut(s) 575, 659, 1455, 1498
HapII CCGG 1 cut(s) 1389
HinfI GANTC 7 cut(s) 65, 261, 280, 329, 516, 968, 1392
HpaII CCGG 1 cut(s) 1389
HphI GGTGA 4 cut(s) 84, 565, 838, 963
Hpy166II GTNNAC 2 cut(s) 426, 569
Hpy188I TCNGA 8 cut(s) 205, 219, 349, 524, 797, 905, 916, 1148
Hpy188III TCNNGA 8 cut(s) 353, 505, 748, 1295, 1396, 1418, 1559, 1568
Hpy8I GTNNAC 2 cut(s) 426, 569
Hpy99I CGWCG 1 cut(s) 1098
HpyAV CCTTC 1 cut(s) 1514
HpyCH4III ACNGT 4 cut(s) 382, 1000, 1379, 1461
HpyF10VI GCNNNNNNNGC 5 cut(s) 449, 546, 823, 1037, 1115
HpyF3I CTNAG 2 cut(s) 1592, 1599
Ksp22I TGATCA 1 cut(s) 349
Kzo9I GATC 5 cut(s) 78, 349, 661, 744, 1595
LguI GCTCTTC 1 cut(s) 697
Lsp1109I GCAGC 3 cut(s) 280, 1093, 1100
LweI GCATC 5 cut(s) 205, 913, 1288, 1367, 1392
MaeI CTAG 6 cut(s) 42, 246, 711, 789, 852, 1362
MaeIII GTNAC 3 cut(s) 90, 502, 969
MalI GATC 5 cut(s) 80, 351, 663, 746, 1597
MboI GATC 5 cut(s) 78, 349, 661, 744, 1595
MflI RGATCY 2 cut(s) 744, 1595
MhlI GDGCHC 5 cut(s) 18, 428, 487, 571, 1054
MlsI TGGCCA 1 cut(s) 1498
MluNI TGGCCA 1 cut(s) 1498
MlyI GAGTC 2 cut(s) 525, 977
MmeI TCCRAC 2 cut(s) 306, 679
Mox20I TGGCCA 1 cut(s) 1498
Mph1103I ATGCAT 2 cut(s) 152, 1407
MscI TGGCCA 1 cut(s) 1498
MseI TTAA 9 cut(s) 242, 299, 363, 594, 674, 1160, 1470, 1487, 1506
MslI CAYNNNNRTG 2 cut(s) 115, 564
Msp20I TGGCCA 1 cut(s) 1498
MspI CCGG 1 cut(s) 1389
MspR9I CCNGG 1 cut(s) 70
Mva1269I GAATGC 2 cut(s) 152, 894
MvaI CCWGG 1 cut(s) 70
MwoI GCNNNNNNNGC 5 cut(s) 449, 546, 823, 1037, 1115
NcoI CCATGG 2 cut(s) 465, 876
NdeII GATC 5 cut(s) 78, 349, 661, 744, 1595
NlaIV GGNNCC 2 cut(s) 832, 932
NmuCI GTSAC 3 cut(s) 90, 502, 969
NsiI ATGCAT 2 cut(s) 152, 1407
NspI RCATGY 1 cut(s) 563
PciSI GCTCTTC 1 cut(s) 697
PcsI WCGNNNNNNNCGW 2 cut(s) 1392, 1566
PctI GAATGC 2 cut(s) 152, 894
PfeI GAWTC 5 cut(s) 65, 261, 280, 329, 1392
PflMI CCANNNNNTGG 2 cut(s) 877, 1339
PkrI GCNGC 3 cut(s) 295, 1090, 1108
Ple19I CGATCG 1 cut(s) 81
PleI GAGTC 2 cut(s) 524, 976
PpsI GAGTC 2 cut(s) 524, 976
PpuMI RGGWCCY 1 cut(s) 931
PshBI ATTAAT 1 cut(s) 1506
Psp5II RGGWCCY 1 cut(s) 931
Psp6I CCWGG 1 cut(s) 68
PspFI CCCAGC 1 cut(s) 667
PspGI CCWGG 1 cut(s) 68
PspN4I GGNNCC 2 cut(s) 832, 932
PspPI GGNCC 3 cut(s) 574, 931, 1454
PspPPI RGGWCCY 1 cut(s) 931
PsuI RGATCY 2 cut(s) 744, 1595
PvuI CGATCG 1 cut(s) 81
RseI CAYNNNNRTG 2 cut(s) 115, 564
SapI GCTCTTC 1 cut(s) 697
SaqAI TTAA 9 cut(s) 242, 299, 363, 594, 674, 1160, 1470, 1487, 1506
SatI GCNGC 3 cut(s) 294, 1089, 1107
Sau3AI GATC 5 cut(s) 78, 349, 661, 744, 1595
Sau96I GGNCC 3 cut(s) 574, 931, 1454
SchI GAGTC 2 cut(s) 525, 977
ScrFI CCNGG 1 cut(s) 70
SduI GDGCHC 5 cut(s) 18, 428, 487, 571, 1054
SfaNI GCATC 5 cut(s) 205, 913, 1288, 1367, 1392
SinI GGWCC 1 cut(s) 931
SmiMI CAYNNNNRTG 2 cut(s) 115, 564
SmlI CTYRAG 1 cut(s) 634
SmoI CTYRAG 1 cut(s) 634
SsiI CCGC 2 cut(s) 722, 849
SspI AATATT 2 cut(s) 643, 1510
SspMI CTAG 6 cut(s) 42, 246, 711, 789, 852, 1362
StyD4I CCNGG 1 cut(s) 68
StyI CCWWGG 2 cut(s) 465, 876
TaaI ACNGT 4 cut(s) 382, 1000, 1379, 1461
TaqI TCGA 5 cut(s) 18, 1093, 1248, 1254, 1417
TfiI GAWTC 5 cut(s) 65, 261, 280, 329, 1392
Tru1I TTAA 9 cut(s) 242, 299, 363, 594, 674, 1160, 1470, 1487, 1506
Tru9I TTAA 9 cut(s) 242, 299, 363, 594, 674, 1160, 1470, 1487, 1506
TscAI CASTG 2 cut(s) 660, 1384
TseFI GTSAC 3 cut(s) 90, 502, 969
TseI GCWGC 3 cut(s) 293, 1088, 1106
Tsp45I GTSAC 3 cut(s) 90, 502, 969
TspDTI ATGAA 6 cut(s) 99, 141, 1140, 1428, 1533, 1566
TspRI CASTG 2 cut(s) 660, 1384
Van91I CCANNNNNTGG 2 cut(s) 877, 1339
VneI GTGCAC 2 cut(s) 424, 567
VpaK11BI GGWCC 1 cut(s) 931
VspI ATTAAT 1 cut(s) 1506
XapI RAATTY 1 cut(s) 1554
XceI RCATGY 1 cut(s) 563
XcmI CCANNNNNNNNNTGG 1 cut(s) 715
XspI CTAG 6 cut(s) 42, 246, 711, 789, 852, 1362
Zsp2I ATGCAT 2 cut(s) 152, 1407
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.