Rmu_sc0000908.1_g000016

Disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000908.1
OG0000085
Physical Location & Seq
Reverse (-)
72208 .. 77233
5026 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000908.1_g000016.1.cds

Sequence Viewer

Length: 3987 bp
atgttagcaaaacaggcttggagaattatcactaacccttcttcactgatagctcgtatatataaggctaagtattatccttctggtatgttttggacagtagaattacatgattctccatcttattcctggaggagcattttttctacaagggaattgatttctcaaggctcatactggcagatagggactggtgggcaagtgagggcatgggtggatccttgggttccaggtattcctaatcatacaccggtggcccttgttcctgtggtgaatacctccattaaggttaatgatcttcttcttgatccttctacttgggatgaagttaaggttagggaattattttctcttgaagaagctgatgctattttaagaattcctttaagtactagagtggtagaagatagaaggccaagtactgttaatgtgtctagtgacttttggaagaaggtgtggaagggaatgatccccacctctgctaagatgcatatttggaagatggtgttggcgattcttgtggtaattgtgacatggatcggtgtcgtagccagttttaagtggatatggaagagttggttcagttacatggttgaaaagccagagccaatatcagaggataatcaagaaccggttgacgtcgatgcctctgcacctcttccttcaacatcagctgaatcatcaactccgaggtggaagcatgatgtgtttttgagtttcaggggtggagacactcgcaaaggtattgcattcgaattatacgatcgactgcaaaacaggagaggaatcaaaacattcatggatgaccaagaccttcaagtaggggatgttatttctcccactctcctaacggcaattaaagaatcaaggtttgcaattattgttctctctcaaaactatgccacttccacttggtgtttggaggaacttagaaacatttgtgaatgcatggaagaagacaacaacagaattctgccacttttttattatgtggatcctactgatgtacgatatcagaagagcagtttcggagatgcgttcactaagcatgaaaaatctgggcgacacagatcagagaaggtgcagcagtggagagatgctttaaaaaaagtggcaaatttctctgggtggcatacactgaattataaaactgaaagagaacttttggatgccattgaagaatctttgtggaacaaattacgacctactgttaaaatgtccgtaggaggctttcaagcatttgaaacaacaaaacaagccattgataaggtcatgaaggcgctaaaaaatgatgaggccactaccattggagtctacggaatggggggcgttggaaagacgacaatggtgaaatatgttggagcacaagcccaagaaagtaggctttttaatcaagtgattatggctgttgtatcccaaaaccccgacttgatgaaaattcaacagacatttgcagaactgctgggctttaaattggaggagaagacagaaattgcaagagccattaaattgaaggagaagataatgggaggtactgggatcctcataatcttggatgacatttggaagagaatagaattttcagacattggaattccgaaccacaacgaacttcaaaattgcaattccaaagtcgtactgaccaccagaagatcgagagtttgtaagatcatggagagccatgcaaaaattcatctcagtatcttatcaaaagaagattcttggagcttatttgtgaatgaagcagggaagtcttttgacaaatcttccaatttctatgatgtagcgagtgaggtggcaagagaatgcgccggtctaccagttgctttgatagcagttgcgagggcccttcgagatgaaggtttgaacgaatggaaagaagctgctcgacgactaaaagcgtctcaacctcccatccctgaagatgagggagatgtgttcaaatgcatgaagttaagctatgattacttgaaatctgatgattccaaatcatgcttcttgctttgctgcttgttcccagaagattataatatcccaattgaatacttggtcaaatatggaattgggaaaggaatgtttgaagattccaccatgctagaagcccgagccacaacatatttagtggtcagggaccttaaagattctagcttgcttttggacgttggagatgaccgaaatgtaaggatgcatgatgtcattcgggatatggcaatcttaatttcgttatctgaaggccagcggttgttggtgaaagttggctatgaattgaagaattggccaaagattgatgcaaacaaaggctactctgcaatctcactaatgcagaacaaaatttgcaagctacccgaagagttggtatgtccaaatctccagattttattactacaacgcagtgtttctctaaatgagatcccaaaatgttttttcgcaagtcaaaatgaattaagagtcttggatcttagctacactgatatttcattactaccccaatcaatcagtttcctaaccaaccttcaagctttgtatttagattattgtgagaacataattgacatttctgtaatcggaaaactttacaagcttgagattcttagtatgaaagcaaatgttctgagagaattgccaagagaaataggacaattgaccaatctaaggatgttggatgtctctgcagactctgctaaacctaatccagtgtcactgagctcgcatgaacgtcttgccacaattccatctgaagtgatatcaaagttgcataaattagaagaactgtacatgcaatactgtggattttggtgctgggggagtaaaattgatggagaaggagaagaaactaatattggctttgatgaattagctggtttatcgtatttaagcgttttgaaagtttgcatatcaaatgcaaattgtatccctaagagtgttaaggtcgaaccgaactgggtttactttgatattagaattgggtttagacgccataccattaagggctttcaatctggtcaaaattgcagatacttgagtcttgatagaactagcacaaccataggaacctttccggactggtttgtcaacgctgtggtaaagaatactgagaggctgcgttataaaaaatgcaaagggttaagtaacattcttgcggaatatgaccgtgggaggcttcatggactgaaagttctctctgtaattggtaggtgtaagaacttgaaagaattgatgaatgcaataacatgtgttccagatatgcctgtgtttgagaacttggaagagttgtatctggaacacctggatgacctgaagaagttatgtgttggcgagttaccacctggatctctccgcagtctgaaattactgaaggtcagtcgatgtcctaacttggggaatgtactgttgccatcaaaattgttgcagaaactaccaaatctggaaaaactaatctgtgagacaagtggagtggaatatgtgtttggatgtgaaggatttgagccagatcaaacaaatctgagagagatggagttgttctatctagacgtaataagaagcttatgtaatggtcatgctccacgtggaatgttccaggctctgaaggaattggtcattcttaattgcaacttccagggaagcctcttcacatttgatgtagctcagtgtctttttcaattggaaggcctttttgtatccgactgccctgtcttggaaagagtaatcgaagcaaggacggaaacagtgaacagcaagaagaccgtttttgcaaaattgaagaacttatacttgctagatcttccaatgttgtacaagggaagtgctactattgattttgagtgtccttcactggaaaacttgcgtctaaaggggtgcccctacttgtcatatccatcctctgcttctgactacttccacagcaggaaccaagtccttttcaacgatcctcgtcatctgaagctgattcccaaatgggcacagatagagtatgtcgctgggtcataa

Protein Analysis

1328

Amino Acids

151.0

Weight (kDa)

7.19

Isoelectric Point (pI)

40.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000085)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g05721 FvH4_2g05721 FvH4_3g35820 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35920 FvH4_3g38670 FvH4_3g43650 FvH4_3g43650 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44070 FvH4_5g01271 FvH4_5g02970 FvH4_5g02970 FvH4_5g02970 FvH4_5g27640 FvH4_5g27640 FvH4_5g27640 FvH4_6g05393 FvH4_6g52372 FvH4_7g06680 FvH4_7g12671 FvH4_7g13640 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31510
malus_domestica MD09G1227900.v1.1 MD11G1019800.v1.1 MD11G1020500.v1.1
prunus_persica Prupe.1G542800_v2.0.a1 Prupe.1G542800_v2.0.a1
pyrus_communis pycom11g01460 pycom11g01490 pycom11g01530 pycom11g01570 pycom15g35490
rosa_chinensis RchiOBHm_Chr1g0353711 RchiOBHm_Chr3g0473211 RchiOBHm_Chr3g0473291 RchiOBHm_Chr3g0473341 RchiOBHm_Chr3g0473381 RchiOBHm_Chr3g0473391 RchiOBHm_Chr3g0473441 RchiOBHm_Chr3g0473481 RchiOBHm_Chr3g0473531 RchiOBHm_Chr3g0473561 RchiOBHm_Chr3g0473571 RchiOBHm_Chr3g0483491 RchiOBHm_Chr3g0488681 RchiOBHm_Chr5g0059311 RchiOBHm_Chr5g0061291 RchiOBHm_Chr5g0061301 RchiOBHm_Chr5g0061331 RchiOBHm_Chr5g0064081 RchiOBHm_Chr5g0064111 RchiOBHm_Chr5g0064151 RchiOBHm_Chr5g0064171 RchiOBHm_Chr5g0069721 RchiOBHm_Chr5g0069731 RchiOBHm_Chr5g0069741 RchiOBHm_Chr5g0078251 RchiOBHm_Chr5g0078301 RchiOBHm_Chr5g0079511 RchiOBHm_Chr5g0079791 RchiOBHm_Chr5g0079811 RchiOBHm_Chr5g0079861 RchiOBHm_Chr5g0079881 RchiOBHm_Chr5g0080241 RchiOBHm_Chr5g0080281 RchiOBHm_Chr5g0080371 RchiOBHm_Chr5g0080671 RchiOBHm_Chr6g0256601 RchiOBHm_Chr6g0274791 RchiOBHm_Chr7g0221971 RchiOBHm_Chr7g0221981
rosa_laevigata RLG00000002106 RLG00000013523 RLG00000014806 RLG00000024010 RLG00000035451 RLG00000035455 RLG00000035464 RLG00000035705 RLG00000036094 RLG00000036817 RLG00000036825 RLG00000036826 RLG00000036848
rosa_multiflora Rmu_co8200400.1_g000001 Rmu_co8473147.1_g000001 Rmu_sc0000394.1_g000030 Rmu_sc0000555.1_g000030 Rmu_sc0000595.1_g000002 Rmu_sc0000595.1_g000006 Rmu_sc0000595.1_g000029 Rmu_sc0000689.1_g000018 Rmu_sc0000689.1_g000032 Rmu_sc0000689.1_g000041 Rmu_sc0000738.1_g000025 Rmu_sc0000826.1_g000016 Rmu_sc0000908.1_g000016 Rmu_sc0000908.1_g000019 Rmu_sc0000908.1_g000021 Rmu_sc0001208.1_g000087 Rmu_sc0001639.1_g000004 Rmu_sc0002075.1_g000004 Rmu_sc0002075.1_g000009 Rmu_sc0002187.1_g000042 Rmu_sc0002187.1_g000043 Rmu_sc0002187.1_g000060 Rmu_sc0002513.1_g000025 Rmu_sc0002983.1_g000008 Rmu_sc0003012.1_g000004 Rmu_sc0003069.1_g000019 Rmu_sc0003069.1_g000020 Rmu_sc0003069.1_g000047 Rmu_sc0003069.1_g000051 Rmu_sc0003069.1_g000053 Rmu_sc0003131.1_g000014 Rmu_sc0003514.1_g000003 Rmu_sc0003547.1_g000006 Rmu_sc0003547.1_g000008 Rmu_sc0004325.1_g000021 Rmu_sc0004482.1_g000004 Rmu_sc0004482.1_g000022 Rmu_sc0005006.1_g000004 Rmu_sc0005006.1_g000009 Rmu_sc0005006.1_g000010 Rmu_sc0005194.1_g000002 Rmu_sc0005194.1_g000003 Rmu_sc0005834.1_g000002 Rmu_sc0005947.1_g000023 Rmu_sc0006792.1_g000026 Rmu_sc0007612.1_g000001 Rmu_sc0007793.1_g000024 Rmu_sc0007793.1_g000025 Rmu_sc0008050.1_g000015 Rmu_sc0008336.1_g000003 Rmu_sc0010248.1_g000002 Rmu_sc0011921.1_g000001 Rmu_sc0011921.1_g000006 Rmu_sc0012138.1_g000001 Rmu_sc0016164.1_g000015 Rmu_sc0018807.1_g000005 Rmu_sc0030948.1_g000001 Rmu_sc0042587.1_g000001 Rmu_ssc0000170.1_g000020 Rmu_ssc0000170.1_g000026 Rmu_ssc0000170.1_g000029
rosa_roxburghii Rroxscaffold_1G00003040 Rroxscaffold_1G00003080 Rroxscaffold_1G00003430 Rroxscaffold_1G00003490 Rroxscaffold_1G00011370 Rroxscaffold_1G00016780 Rroxscaffold_1G00019390 Rroxscaffold_1G00019400 Rroxscaffold_1G00019420 Rroxscaffold_1G00021170 Rroxscaffold_3G00237530 Rroxscaffold_3G00246470 Rroxscaffold_4G00301730 Rroxscaffold_4G00309300 Rroxscaffold_6G00398250 Rroxscaffold_6G00398270 Rroxscaffold_6G00398280 Rroxscaffold_6G00408070 Rroxscaffold_7G00193940 Rroxscaffold_7G00209570
rosa_rugosa Rorug01G0237100 Rorug03G0098200 Rorug03G0132200 Rorug03G0132400 Rorug03G0132500 Rorug03G0132500 Rorug03G0132500 Rorug03G0132700 Rorug03G0132800 Rorug03G0205900 Rorug03G0206100 Rorug03G0206100 Rorug03G0206300 Rorug03G0206400 Rorug03G0206400 Rorug03G0240700 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug05G0322400 Rorug05G0339300 Rorug05G0339500 Rorug05G0362200 Rorug05G0362300 Rorug05G0362400 Rorug05G0362600 Rorug05G0362700 Rorug05G0362800 Rorug05G0363100 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0459900 Rorug05G0464600 Rorug05G0465000 Rorug05G0465100 Rorug05G0465200 Rorug05G0466000 Rorug05G0466300 Rorug05G0466400 Rorug05G0466500 Rorug05G0466600 Rorug05G0466700 Rorug05G0466700 Rorug05G0466700 Rorug05G0466800 Rorug05G0466900 Rorug05G0468100 Rorug05G0562200 Rorug05G0562300 Rorug06G0084400 Rorug06G0084500 Rorug06G0084500 Rorug06G0084600 Rorug07G0136400 Rorug07G0204500 Rorug07G0204600 Rorug07G0221500
rosa_samantha Rh5CG438200 Rh5CG569900 Rh6AG080700 Rh7CG362800 Rh7DG275900 Rh7DG343100
rosa_wichuraiana Rw0G004790 Rw0G008160 Rw0G008170 Rw0G008200 Rw0G008210 Rw0G012980 Rw0G013670 Rw0G019920 Rw0G020380 Rw0G022790 Rw0G022800 Rw0G023350 Rw1G005530 Rw1G021740 Rw3G013910 Rw3G015980 Rw3G023020 Rw3G023030 Rw3G025580 Rw5G027180 Rw5G037760 Rw5G037770 Rw5G037780 Rw5G037790 Rw5G037810 Rw5G037820 Rw5G039500 Rw5G039520 Rw5G039530 Rw5G039540 Rw5G039550 Rw5G039570 Rw5G039580 Rw5G039610 Rw5G039630 Rw5G039660 Rw5G042590 Rw5G047840 Rw5G048170 Rw5G048400 Rw5G048470 Rw5G048540 Rw6G007030 Rw6G007080 Rw6G007460 Rw6G017430 Rw7G023150 Rw7G023260 Rw7G029260 Rw7G029270 Rw7G030950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 1146, 2028, 3108
AasI GACNNNNNNGTC 2 cut(s) 3068, 3689
AatII GACGTC 1 cut(s) 642
AccB1I GGYRCC 1 cut(s) 3855
AccI GTMKAC 2 cut(s) 1314, 1816
AccIII TCCGGA 1 cut(s) 3058
AciI CCGC 3 cut(s) 2239, 3140, 3337
AcoI YGGCCR 1 cut(s) 2276
AcsI RAATTY 8 cut(s) 378, 969, 1117, 1437, 1577, 1593, 1689, 2331
AcuI CTGAAG 7 cut(s) 1941, 2250, 2757, 3317, 3374, 3605, 3959
AcvI CACGTG 1 cut(s) 3566
AcyI GRCGYC 2 cut(s) 639, 2974
AdeI CACNNNGTG 1 cut(s) 915
AfaI GTAC 8 cut(s) 391, 421, 1008, 1534, 1638, 2774, 3387, 3794
AfiI CCNNNNNNNGG 3 cut(s) 2652, 3377, 3694
AflIII ACRYGT 1 cut(s) 3230
AgeI ACCGGT 2 cut(s) 250, 631
AjnI CCWGG 6 cut(s) 128, 229, 3285, 3325, 3576, 3615
AjuI GAANNNNNNNTTGG 8 cut(s) 491, 523, 1979, 2011, 2823, 2855, 3450, 3482
AloI GAACNNNNNNTCC 2 cut(s) 3159, 3191
Alw21I GWGCWC 2 cut(s) 1366, 2708
Alw26I GTCTC 4 cut(s) 723, 1908, 2671, 3437
AlwNI CAGNNNCTG 2 cut(s) 2678, 3583
Ama87I CYCGRG 1 cut(s) 2103
Aor13HI TCCGGA 1 cut(s) 3058
AoxI GGCC 7 cut(s) 255, 413, 1296, 1845, 2233, 2276, 3667
ApaI GGGCCC 1 cut(s) 1849
ApeKI GCWGC 4 cut(s) 1084, 1883, 2007, 3100
ApoI RAATTY 8 cut(s) 378, 969, 1117, 1437, 1577, 1593, 1689, 2331
AsiGI ACCGGT 2 cut(s) 250, 631
AspLEI GCGC 2 cut(s) 1282, 1811
AspS9I GGNCC 4 cut(s) 256, 1845, 1846, 2131
AsuHPI GGTGA 3 cut(s) 283, 1360, 2260
AsuII TTCGAA 1 cut(s) 753
AvaI CYCGRG 1 cut(s) 2103
AvaII GGWCC 1 cut(s) 2131
BaeGI GKGCMC 3 cut(s) 1849, 3860, 3961
BaeI ACNNNNGTAYC 2 cut(s) 3007, 3040
BalI TGGCCA 1 cut(s) 2278
BamHI GGATCC 3 cut(s) 217, 994, 1539
BanI GGYRCC 1 cut(s) 3855
BanII GRGCYC 2 cut(s) 1849, 2708
BarI GAAGNNNNNNTAC 4 cut(s) 403, 435, 3752, 3784
BbrPI CACGTG 1 cut(s) 3566
BbsI GAAGAC 3 cut(s) 963, 1490, 3746
Bbv12I GWGCWC 2 cut(s) 1366, 2708
BbvI GCAGC 4 cut(s) 1096, 1870, 1994, 3087
BccI CCATC 8 cut(s) 127, 496, 1922, 2740, 2810, 3403, 3505, 3883
BceAI ACGGC 1 cut(s) 867
BcgI CGANNNNNNTGC 2 cut(s) 632, 666
BciT130I CCWGG 6 cut(s) 130, 231, 3287, 3327, 3578, 3617
BciVI GTATCC 3 cut(s) 1423, 2921, 3688
BcoDI GTCTC 4 cut(s) 723, 1908, 2671, 3437
BfaI CTAG 7 cut(s) 393, 435, 2096, 2145, 3036, 3527, 3776
BfmI CTRYAG 1 cut(s) 2670
BfoI RGCGCY 1 cut(s) 1283
BfuI GTATCC 3 cut(s) 1423, 2921, 3688
BglII AGATCT 1 cut(s) 3778
BisI GCNGC 4 cut(s) 1085, 1884, 2008, 3101
BlsI GCNGC 4 cut(s) 1086, 1885, 2009, 3102
BmcAI AGTACT 2 cut(s) 391, 421
Bme1390I CCNGG 6 cut(s) 130, 231, 3287, 3327, 3578, 3617
Bme18I GGWCC 1 cut(s) 2131
BmeT110I CYCGRG 1 cut(s) 2103
BmgT120I GGNCC 4 cut(s) 256, 1845, 1846, 2131
BmiI GGNNCC 9 cut(s) 219, 228, 996, 1541, 1847, 2132, 3052, 3857, 3908
BmrFI CCNGG 6 cut(s) 130, 231, 3287, 3327, 3578, 3617
BmrI ACTGGG 2 cut(s) 1545, 2950
BmsI GCATC 8 cut(s) 355, 477, 634, 1024, 1087, 1159, 2175, 2278
BmuI ACTGGG 2 cut(s) 1545, 2950
BpiI GAAGAC 3 cut(s) 963, 1490, 3746
BpmI CTGGAG 2 cut(s) 151, 2354
Bpu14I TTCGAA 1 cut(s) 753
BpuEI CTTGAG 3 cut(s) 150, 2603, 3040
BsaAI YACGTR 1 cut(s) 3566
BsaHI GRCGYC 2 cut(s) 639, 2974
BsaJI CCNNGG 4 cut(s) 221, 689, 3151, 3616
BsaWI WCCGGW 3 cut(s) 250, 631, 3058
Bsc4I CCNNNNNNNGG 3 cut(s) 2652, 3377, 3694
Bse118I RCCGGY 3 cut(s) 250, 631, 1811
Bse1I ACTGG 9 cut(s) 182, 196, 552, 1540, 1820, 2693, 2945, 3068, 3837
BseAI TCCGGA 1 cut(s) 3058
BseBI CCWGG 6 cut(s) 130, 231, 3287, 3327, 3578, 3617
BseDI CCNNGG 4 cut(s) 221, 689, 3151, 3616
BseLI CCNNNNNNNGG 3 cut(s) 2652, 3377, 3694
BseMII CTCAG 6 cut(s) 1711, 2603, 2693, 3084, 3494, 3659
BseNI ACTGG 9 cut(s) 182, 196, 552, 1540, 1820, 2693, 2945, 3068, 3837
BseRI GAGGAG 2 cut(s) 148, 1493
BseSI GKGCMC 3 cut(s) 1849, 3860, 3961
BseXI GCAGC 4 cut(s) 1096, 1870, 1994, 3087
BseYI CCCAGC 3 cut(s) 1462, 2799, 3977
BsgI GTGCAG 2 cut(s) 636, 1103
Bsh1285I CGRYCG 1 cut(s) 766
BshFI GGCC 7 cut(s) 257, 415, 1298, 1847, 2235, 2278, 3669
BshNI GGYRCC 1 cut(s) 3855
BshTI ACCGGT 2 cut(s) 250, 631
BsiEI CGRYCG 1 cut(s) 766
BsiHKAI GWGCWC 2 cut(s) 1366, 2708
BsiHKCI CYCGRG 1 cut(s) 2103
BsiSI CCGG 4 cut(s) 251, 632, 1812, 3059
BslFI GGGAC 2 cut(s) 202, 2144
BslI CCNNNNNNNGG 3 cut(s) 2652, 3377, 3694
BsmAI GTCTC 4 cut(s) 723, 1908, 2671, 3437
BsmBI CGTCTC 1 cut(s) 1908
BsmFI GGGAC 2 cut(s) 202, 2144
BsmI GAATGC 4 cut(s) 749, 950, 1811, 3226
BsnI GGCC 7 cut(s) 257, 415, 1298, 1847, 2235, 2278, 3669
BsoBI CYCGRG 1 cut(s) 2103
Bsp119I TTCGAA 1 cut(s) 753
Bsp120I GGGCCC 1 cut(s) 1845
Bsp1286I GDGCHC 5 cut(s) 1366, 1849, 2708, 3860, 3961
Bsp13I TCCGGA 1 cut(s) 3058
Bsp1407I TGTACA 2 cut(s) 2772, 3792
BspACI CCGC 3 cut(s) 2239, 3140, 3337
BspANI GGCC 7 cut(s) 257, 415, 1298, 1847, 2235, 2278, 3669
BspCNI CTCAG 6 cut(s) 1710, 2604, 2694, 3085, 3495, 3658
BspEI TCCGGA 1 cut(s) 3058
BspHI TCATGA 1 cut(s) 1272
BspLI GGNNCC 9 cut(s) 219, 228, 996, 1541, 1847, 2132, 3052, 3857, 3908
BspMAI CTGCAG 1 cut(s) 2674
BspQI GCTCTTC 1 cut(s) 1013
BspT104I TTCGAA 1 cut(s) 753
BspT107I GGYRCC 1 cut(s) 3855
BsrFI RCCGGY 3 cut(s) 250, 631, 1811
BsrGI TGTACA 2 cut(s) 2772, 3792
BsrI ACTGG 9 cut(s) 182, 196, 552, 1540, 1820, 2693, 2945, 3068, 3837
BssAI RCCGGY 3 cut(s) 250, 631, 1811
BssECI CCNNGG 4 cut(s) 221, 689, 3151, 3616
BssNI GRCGYC 2 cut(s) 639, 2974
BssT1I CCWWGG 1 cut(s) 221
Bst2UI CCWGG 6 cut(s) 130, 231, 3287, 3327, 3578, 3617
Bst4CI ACNGT 9 cut(s) 100, 424, 1210, 2772, 2786, 3152, 3390, 3727, 3745
Bst6I CTCTTC 7 cut(s) 566, 663, 1013, 1562, 2343, 3261, 3632
BstACI GRCGYC 2 cut(s) 639, 2974
BstAPI GCANNNNNTGC 1 cut(s) 2678
BstAUI TGTACA 2 cut(s) 2772, 3792
BstBAI YACGTR 1 cut(s) 3566
BstBI TTCGAA 1 cut(s) 753
BstC8I GCNNGC 4 cut(s) 2150, 2237, 2339, 2708
BstDSI CCRYGG 1 cut(s) 3151
BstH2I RGCGCY 1 cut(s) 1283
BstHHI GCGC 2 cut(s) 1282, 1811
BstMAI GTCTC 4 cut(s) 723, 1908, 2671, 3437
BstMCI CGRYCG 1 cut(s) 766
BstMWI GCNNNNNNNGC 3 cut(s) 14, 1832, 2678
BstNI CCWGG 6 cut(s) 130, 231, 3287, 3327, 3578, 3617
BstNSI RCATGY 2 cut(s) 2779, 3234
BstSCI CCNGG 6 cut(s) 128, 229, 3285, 3325, 3576, 3615
BstSFI CTRYAG 1 cut(s) 2670
BstSLI GKGCMC 3 cut(s) 1849, 3860, 3961
BstV1I GCAGC 4 cut(s) 1096, 1870, 1994, 3087
BstV2I GAAGAC 3 cut(s) 963, 1490, 3746
BstX2I RGATCY 7 cut(s) 217, 994, 1539, 2409, 2455, 3329, 3778
BstYI RGATCY 7 cut(s) 217, 994, 1539, 2409, 2455, 3329, 3778
BsuI GTATCC 3 cut(s) 1423, 2921, 3688
BsuRI GGCC 7 cut(s) 257, 415, 1298, 1847, 2235, 2278, 3669
BtgI CCRYGG 1 cut(s) 3151
BtsI GCAGTG 2 cut(s) 1094, 2398
Cac8I GCNNGC 4 cut(s) 2150, 2237, 2339, 2708
CaiI CAGNNNCTG 2 cut(s) 2678, 3583
CciI TCATGA 1 cut(s) 1272
CfoI GCGC 2 cut(s) 1282, 1811
Cfr10I RCCGGY 3 cut(s) 250, 631, 1811
Cfr13I GGNCC 4 cut(s) 256, 1845, 1846, 2131
CseI GACGC 3 cut(s) 1890, 2982, 3833
Csp6I GTAC 8 cut(s) 390, 420, 1007, 1533, 1637, 2773, 3386, 3793
CspAI ACCGGT 2 cut(s) 250, 631
CspCI CAANNNNNGTGG 4 cut(s) 1288, 1323, 3435, 3470
CviQI GTAC 8 cut(s) 390, 420, 1007, 1533, 1637, 2773, 3386, 3793
DraI TTTAAA 2 cut(s) 1104, 1471
DraIII CACNNNGTG 1 cut(s) 915
DrdI GACNNNNNNGTC 2 cut(s) 3068, 3689
DseDI GACNNNNNNGTC 2 cut(s) 3068, 3689
EaeI YGGCCR 1 cut(s) 2276
Eam1104I CTCTTC 7 cut(s) 566, 663, 1013, 1562, 2343, 3261, 3632
EarI CTCTTC 7 cut(s) 566, 663, 1013, 1562, 2343, 3261, 3632
Ecl136II GAGCTC 1 cut(s) 2706
Eco130I CCWWGG 1 cut(s) 221
Eco147I AGGCCT 1 cut(s) 3669
Eco24I GRGCYC 2 cut(s) 1849, 2708
Eco32I GATATC 2 cut(s) 1013, 2745
Eco47I GGWCC 1 cut(s) 2131
Eco53kI GAGCTC 1 cut(s) 2706
Eco57I CTGAAG 7 cut(s) 1941, 2250, 2757, 3317, 3374, 3605, 3959
Eco72I CACGTG 1 cut(s) 3566
Eco88I CYCGRG 1 cut(s) 2103
EcoICRI GAGCTC 1 cut(s) 2706
EcoO109I RGGNCCY 3 cut(s) 1845, 1846, 2131
EcoRI GAATTC 3 cut(s) 378, 969, 1593
EcoRII CCWGG 6 cut(s) 128, 229, 3285, 3325, 3576, 3615
EcoRV GATATC 2 cut(s) 1013, 2745
EcoT14I CCWWGG 1 cut(s) 221
EcoT22I ATGCAT 4 cut(s) 492, 950, 1949, 2190
EcoT38I GRGCYC 2 cut(s) 1849, 2708
ErhI CCWWGG 1 cut(s) 221
Esp3I CGTCTC 1 cut(s) 1908
FalI AAGNNNNNCTT 2 cut(s) 367, 399
FaqI GGGAC 2 cut(s) 202, 2144
FblI GTMKAC 2 cut(s) 1314, 1816
Fnu4HI GCNGC 4 cut(s) 1085, 1884, 2008, 3101
FriOI GRGCYC 2 cut(s) 1849, 2708
Fsp4HI GCNGC 4 cut(s) 1085, 1884, 2008, 3101
FspBI CTAG 7 cut(s) 393, 435, 2096, 2145, 3036, 3527, 3776
GlaI GCGC 2 cut(s) 1281, 1810
GluI GCNGC 4 cut(s) 1085, 1884, 2008, 3101
GsaI CCCAGC 3 cut(s) 1466, 2803, 3981
GsuI CTGGAG 2 cut(s) 151, 2354
HaeII RGCGCY 1 cut(s) 1283
HaeIII GGCC 7 cut(s) 257, 415, 1298, 1847, 2235, 2278, 3669
HapII CCGG 4 cut(s) 251, 632, 1812, 3059
HgaI GACGC 3 cut(s) 1890, 2982, 3833
HhaI GCGC 2 cut(s) 1282, 1811
Hin1I GRCGYC 2 cut(s) 639, 2974
Hin6I GCGC 2 cut(s) 1280, 1809
HinP1I GCGC 2 cut(s) 1280, 1809
HincII GTYRAC 2 cut(s) 637, 3073
HindII GTYRAC 2 cut(s) 637, 3073
HindIII AAGCTT 3 cut(s) 2517, 2579, 3541
HpaII CCGG 4 cut(s) 251, 632, 1812, 3059
HphI GGTGA 3 cut(s) 283, 1360, 2260
Hpy166II GTNNAC 7 cut(s) 637, 1041, 1315, 1817, 2947, 3073, 3730
Hpy8I GTNNAC 7 cut(s) 637, 1041, 1315, 1817, 2947, 3073, 3730
Hpy99I CGWCG 2 cut(s) 644, 1893
HpyCH4III ACNGT 9 cut(s) 100, 424, 1210, 2772, 2786, 3152, 3390, 3727, 3745
HpyCH4IV ACGT 5 cut(s) 639, 2160, 2716, 3531, 3565
HpyF10VI GCNNNNNNNGC 3 cut(s) 14, 1832, 2678
HpySE526I ACGT 5 cut(s) 639, 2160, 2716, 3531, 3565
Hsp92I GRCGYC 2 cut(s) 639, 2974
HspAI GCGC 2 cut(s) 1280, 1809
Kpn2I TCCGGA 1 cut(s) 3058
LguI GCTCTTC 1 cut(s) 1013
LmnI GCTCC 4 cut(s) 135, 1361, 1725, 3565
Lsp1109I GCAGC 4 cut(s) 1096, 1870, 1994, 3087
LweI GCATC 8 cut(s) 355, 477, 634, 1024, 1087, 1159, 2175, 2278
MaeI CTAG 7 cut(s) 393, 435, 2096, 2145, 3036, 3527, 3776
MaeII ACGT 5 cut(s) 639, 2160, 2716, 3531, 3565
MaeIII GTNAC 6 cut(s) 437, 529, 584, 2697, 3128, 3318
MfeI CAATTG 3 cut(s) 2037, 2639, 3659
MflI RGATCY 7 cut(s) 217, 994, 1539, 2409, 2455, 3329, 3778
MhlI GDGCHC 5 cut(s) 1366, 1849, 2708, 3860, 3961
MlsI TGGCCA 1 cut(s) 2278
MluNI TGGCCA 1 cut(s) 2278
MlyI GAGTC 4 cut(s) 1320, 2457, 2669, 3031
MmeI TCCRAC 5 cut(s) 1312, 1339, 2143, 2640, 3705
Mox20I TGGCCA 1 cut(s) 2278
Mph1103I ATGCAT 4 cut(s) 492, 950, 1949, 2190
MroI TCCGGA 1 cut(s) 3058
MscI TGGCCA 1 cut(s) 2278
MslI CAYNNNNRTG 1 cut(s) 3288
Msp20I TGGCCA 1 cut(s) 2278
MspA1I CMGCKG 2 cut(s) 674, 2239
MspI CCGG 4 cut(s) 251, 632, 1812, 3059
MspR9I CCNGG 6 cut(s) 130, 231, 3287, 3327, 3578, 3617
MunI CAATTG 3 cut(s) 2037, 2639, 3659
Mva1269I GAATGC 4 cut(s) 749, 950, 1811, 3226
MvaI CCWGG 6 cut(s) 130, 231, 3287, 3327, 3578, 3617
MwoI GCNNNNNNNGC 3 cut(s) 14, 1832, 2678
NlaIV GGNNCC 9 cut(s) 219, 228, 996, 1541, 1847, 2132, 3052, 3857, 3908
NmuCI GTSAC 3 cut(s) 437, 529, 2697
NsiI ATGCAT 4 cut(s) 492, 950, 1949, 2190
NspI RCATGY 2 cut(s) 2779, 3234
NspV TTCGAA 1 cut(s) 753
PagI TCATGA 1 cut(s) 1272
PceI AGGCCT 1 cut(s) 3669
PciI ACATGT 1 cut(s) 3230
PciSI GCTCTTC 1 cut(s) 1013
PcsI WCGNNNNNNNCGW 1 cut(s) 759
PctI GAATGC 4 cut(s) 749, 950, 1811, 3226
PfoI TCCNGGA 1 cut(s) 128
PinAI ACCGGT 2 cut(s) 250, 631
PkrI GCNGC 4 cut(s) 1086, 1885, 2009, 3102
Ple19I CGATCG 1 cut(s) 766
PleI GAGTC 4 cut(s) 1319, 2456, 2669, 3030
PmaCI CACGTG 1 cut(s) 3566
PmlI CACGTG 1 cut(s) 3566
PpsI GAGTC 4 cut(s) 1319, 2456, 2669, 3030
Ppu21I YACGTR 1 cut(s) 3566
PpuMI RGGWCCY 1 cut(s) 2131
PscI ACATGT 1 cut(s) 3230
PsiI TTATAA 3 cut(s) 1146, 2028, 3108
Psp124BI GAGCTC 1 cut(s) 2708
Psp5II RGGWCCY 1 cut(s) 2131
Psp6I CCWGG 6 cut(s) 128, 229, 3285, 3325, 3576, 3615
PspCI CACGTG 1 cut(s) 3566
PspFI CCCAGC 3 cut(s) 1462, 2799, 3977
PspGI CCWGG 6 cut(s) 128, 229, 3285, 3325, 3576, 3615
PspN4I GGNNCC 9 cut(s) 219, 228, 996, 1541, 1847, 2132, 3052, 3857, 3908
PspOMI GGGCCC 1 cut(s) 1845
PspPI GGNCC 4 cut(s) 256, 1845, 1846, 2131
PspPPI RGGWCCY 1 cut(s) 2131
PsrI GAACNNNNNNTAC 2 cut(s) 2930, 2962
PstI CTGCAG 1 cut(s) 2674
PstNI CAGNNNCTG 2 cut(s) 2678, 3583
PsuI RGATCY 7 cut(s) 217, 994, 1539, 2409, 2455, 3329, 3778
PvuI CGATCG 1 cut(s) 766
PvuII CAGCTG 1 cut(s) 674
RsaI GTAC 8 cut(s) 391, 421, 1008, 1534, 1638, 2774, 3387, 3794
RsaNI GTAC 8 cut(s) 390, 420, 1007, 1533, 1637, 2773, 3386, 3793
RseI CAYNNNNRTG 1 cut(s) 3288
SacI GAGCTC 1 cut(s) 2708
SapI GCTCTTC 1 cut(s) 1013
SatI GCNGC 4 cut(s) 1085, 1884, 2008, 3101
Sau96I GGNCC 4 cut(s) 256, 1845, 1846, 2131
ScaI AGTACT 2 cut(s) 391, 421
SchI GAGTC 4 cut(s) 1320, 2457, 2669, 3031
ScrFI CCNGG 6 cut(s) 130, 231, 3287, 3327, 3578, 3617
SduI GDGCHC 5 cut(s) 1366, 1849, 2708, 3860, 3961
SfaNI GCATC 8 cut(s) 355, 477, 634, 1024, 1087, 1159, 2175, 2278
SfcI CTRYAG 1 cut(s) 2670
SfuI TTCGAA 1 cut(s) 753
SgrAI CRCCGGYG 1 cut(s) 250
SinI GGWCC 1 cut(s) 2131
SmiMI CAYNNNNRTG 1 cut(s) 3288
SmlI CTYRAG 3 cut(s) 165, 2582, 3019
SmoI CTYRAG 3 cut(s) 165, 2582, 3019
SseBI AGGCCT 1 cut(s) 3669
SsiI CCGC 3 cut(s) 2239, 3140, 3337
SspI AATATT 1 cut(s) 2839
SspMI CTAG 7 cut(s) 393, 435, 2096, 2145, 3036, 3527, 3776
SstI GAGCTC 1 cut(s) 2708
StuI AGGCCT 1 cut(s) 3669
StyD4I CCNGG 6 cut(s) 128, 229, 3285, 3325, 3576, 3615
StyI CCWWGG 1 cut(s) 221
TaaI ACNGT 9 cut(s) 100, 424, 1210, 2772, 2786, 3152, 3390, 3727, 3745
TaiI ACGT 5 cut(s) 642, 2163, 2719, 3534, 3568
TaqI TCGA 9 cut(s) 642, 753, 766, 1655, 1852, 1888, 2931, 3364, 3708
TaqII GACCGA 1 cut(s) 2187
TatI WGTACW 5 cut(s) 389, 419, 2772, 3385, 3792
TseFI GTSAC 3 cut(s) 437, 529, 2697
TseI GCWGC 4 cut(s) 1084, 1883, 2007, 3100
Tsp45I GTSAC 3 cut(s) 437, 529, 2697
TspGWI ACGGA 3 cut(s) 1210, 1332, 3734
VpaK11BI GGWCC 1 cut(s) 2131
XapI RAATTY 8 cut(s) 378, 969, 1117, 1437, 1577, 1593, 1689, 2331
XbaI TCTAGA 1 cut(s) 3526
XceI RCATGY 2 cut(s) 2779, 3234
XcmI CCANNNNNNNNNTGG 2 cut(s) 126, 916
XmiI GTMKAC 2 cut(s) 1314, 1816
XspI CTAG 7 cut(s) 393, 435, 2096, 2145, 3036, 3527, 3776
ZraI GACGTC 1 cut(s) 640
ZrmI AGTACT 2 cut(s) 391, 421
Zsp2I ATGCAT 4 cut(s) 492, 950, 1949, 2190
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.