Rmu_sc0003131.1_g000014

Disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003131.1
OG0000085
Physical Location & Seq
Forward (+)
62106 .. 69186
7081 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003131.1_g000014.1.cds

Sequence Viewer

Length: 4245 bp
atgaacacagagagctcttcacctcctcggtggaaatatgatgtctttttgagttttagaggccaggatactcgaaagggttttacagaccatctatacactgcattggaagataaaggaatcacaactttcagggatgatcctcacaaaggggaagctattttttcaacacttcgtgctgcaattaaagaatcgagatttggcctcattgttctctcacaaaattatgcatcgtcgacatggtgcttgaatgaacttgtgagaattcttgaatgcatgaaagcaagaggaactgtgctgccaattttttatgatgttgatccctctgatgtacgaaagcaaacagggagttttagagaagccttcgctaatcatgaagaaagatttaggggtgacgaagagaaagtggagaggtggagatctgcattaactgaagtggcaagtttctcagggtggaattcaaaggaatggtatgaatcaatgctcgtaagagatattgttcaagttatatggacaaaattgcaacctacagagtcgactgaagattttgaagcaacaggagatgtcatggaccaaacttctccccagcctgacccagctcctgtgtggaagaatgatgtgctttcgggtctcggggtggaagacactcgcaggggttttgtagcccattcagaccatgaattgccaaacacaggactaagtaaaacattcaaggatgaagaccagcttgaaaaaggggtagccctcccttctgcatctctttcttcaactgaaccaagtcctcaaccagctcttgggcagaagaatgatgagtttttgggtttcaggggaaacgacactcaaaggggttttgtcacccattcaagtcatgaaatacaaaacaccagagtgactaagacattcaccgatgaagaacatcttgaaaaagggatagctgtcccctctacatctccgccttcatcagctgaacgagatcctctgctgaagtatgatgtgtttttaagtttcaggggggaagacactcgtaggggttttatagcctatttatatcgtgaattgcaaaacaccagagtaattaaaactttcaaggatgacgtacaactacaaaaagggacggttatttcttcaaatctcctaacggcaatcgaagaatcaaggtttgcgattattgtgttgtcggagaactatgcttcttctgcatggtgtttggatgaacttacaaagatttttcagtgcatggagggtaaggacacaattctcccaattttttataagttggatcccgctgttgtacgatatcaaaaggaagacacaagttttggaaaagctttcattaagcatgaagctaggcaagacattgagaagatgaaccagtggagagctgctttagaaggagtggctggaatctctgggtggcattcaaccaaatatccgacggatatagaactaattgaagacattgtgaaacagttgtgggagaaagtacttgaagcacccaccagaaattttgaaacatttgaagcaacaaggcaagccatggatgaggtcatgaaggtattaaaagatgatcaagtcactgtccttggggtgcatggagtgggtggcgttggaaagacgacgatggtcaaacatgttggtgcacaatctaagaaagatgggctttttgatcatgtgatcatggttgtcgtatccaaaaaccctgacttggaagaaattcaaggcacgttggcagaatcgctgggcttgaaggaggggatcatgagaggaaataggatgcttataatcttggatgacatttgggagagtcttgaactttcgagcattggaattcccagtcaccatgagcttcagaggtgcaattctaaagttatactcaccacaaggaaaagcaatgtatgccattctatgggttgccatgcccagatccctctcaatgttctatcagaggaagattcttggaagttgttcatggagacgtcggggaagtcttttcatgaatctaccgtttcctatgatgaagcgagaaaggtagctggagaatgcggtggtctcccaaaagcaataaaagcagctgcaaggtcacttggagataaatacttggacgaatggaatgaagcagttgcaacagcatttggagatgactgcttggacgaatggaatgaaacggctcaatctgtcaactccgaagctgaggaagacgcatttcattcattggcatctgatgatgccaagtattgcttcttgctatgctgcctattcccagaaaattatgatatcccaattgaagagttgctcaagtatgggattggaataggtttgtttcaatatgatacaatgcaagaagccagagatagagcacattctgtgttcaagtacctcaaagcttctagattgcttttggacggtacaaagaagggatgcataaggatgactgctgacattcgaaatctggccatgtccattgcgttgtccgaagaaggtgatgggtttttagtaaaagctggttgtgaactagaggagtggccagaggcaggatggtggcaaggatttacttcctggctccgctacagctgggattggccaatagatgctcatgaaggctactcaacaatctcactcatgaaaaataagctacataagcttcccgaatatttggtatgttcagagctcaaaattttattgttacaaagtaatgctggtatatctgacatcccagaaacctttttgcaaagtcctaatgcgctaagggtctttgatcttagcttcactagtatttcatcactgcctccatcattcagtttcctaaccaacatcctagttttgaatttggatttttgccataagttaagtaacatatccgttctaggaaaacttaagaaacttgagattcttagtatgagagaacttcctcttaagagatttccgaaacaaataggagaattgaccagtctaaggaagttggacgtcactggtagatatcttgtaacaatcccatctaaagtgatatcaaggttgtatagattggaagaactgcacatgaaatttcaatttgggaaatggggaagtaaaattgaggatgcagttgaagaaaccaatgctgactttgatgagttgactggcttgttggatttaaacattttggaagtttacatatctgatgctgcatgcttgcctgaaagtattgagtacttcaagccgaattgggtaaaatttgatatatgcatcagcagacacgtcccttatgtgctgctccctcaacatgatggtctttcaagaaccttgactcttgacacaacaatcaatagcttaccggattggttcatcagcgttgtggcagagaaagtggagaagctagagtacacaaattgcgaagacttgaatgatgtcgttggggaatatgaccatggcagattacttgcactgaaatatctctctctgaacgggaaccgtaagaacttgaaagagataatcaacacaatgacacgggtttcaaataaaccattatttgagaacttggaagagttgcatctgtactgcttatattccctcaaggagttatgtgttggtgagctaccacctgggtctctatgcaagctcaagttcttgaaagtgcaaacttgtcgtagcttggtgaatgcacttttaccatcaacattgttgcagagactacaaaatctggaagaaatcatttgtataaatctggaaggaatgaaatatgtatttggatctgatgaagggcttgatccagaaaatattttcttgaggaaattgagggagatgagattgtgttctctatacgaactagtaagcatatgtaatggtcctgctccgtgtgcaatcttccagaatcttaaagttttggcaatttgcgagtgcaaggaattgaaaaatctcttcacagtagatgtggctgaatgtctttttcagttggaagacctttccatagagcgctgtcctagcttggacggagtcattgaagcaagctatagcttgaacagcaagattaaacttcccacgttgaagaagttagctttgatagatcttccggcgctcacaaggttctgcactgaaagtgatactattgaaactgagtgcccttcattggaatacttgtacgtggagaagtgcttccagttttcatattttgcttaccacttcgacaacaagaaccaagtccacttcaatgataaacaacatttgagttctttagtgaaaaggtgggaggaagtgcataatcggctataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC TIR

Protein Analysis

1414

Amino Acids

160.58

Weight (kDa)

5.21

Isoelectric Point (pI)

41.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000085)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g05721 FvH4_2g05721 FvH4_3g35820 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35920 FvH4_3g38670 FvH4_3g43650 FvH4_3g43650 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44070 FvH4_5g01271 FvH4_5g02970 FvH4_5g02970 FvH4_5g02970 FvH4_5g27640 FvH4_5g27640 FvH4_5g27640 FvH4_6g05393 FvH4_6g52372 FvH4_7g06680 FvH4_7g12671 FvH4_7g13640 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31510
malus_domestica MD09G1227900.v1.1 MD11G1019800.v1.1 MD11G1020500.v1.1
prunus_persica Prupe.1G542800_v2.0.a1 Prupe.1G542800_v2.0.a1
pyrus_communis pycom11g01460 pycom11g01490 pycom11g01530 pycom11g01570 pycom15g35490
rosa_chinensis RchiOBHm_Chr1g0353711 RchiOBHm_Chr3g0473211 RchiOBHm_Chr3g0473291 RchiOBHm_Chr3g0473341 RchiOBHm_Chr3g0473381 RchiOBHm_Chr3g0473391 RchiOBHm_Chr3g0473441 RchiOBHm_Chr3g0473481 RchiOBHm_Chr3g0473531 RchiOBHm_Chr3g0473561 RchiOBHm_Chr3g0473571 RchiOBHm_Chr3g0483491 RchiOBHm_Chr3g0488681 RchiOBHm_Chr5g0059311 RchiOBHm_Chr5g0061291 RchiOBHm_Chr5g0061301 RchiOBHm_Chr5g0061331 RchiOBHm_Chr5g0064081 RchiOBHm_Chr5g0064111 RchiOBHm_Chr5g0064151 RchiOBHm_Chr5g0064171 RchiOBHm_Chr5g0069721 RchiOBHm_Chr5g0069731 RchiOBHm_Chr5g0069741 RchiOBHm_Chr5g0078251 RchiOBHm_Chr5g0078301 RchiOBHm_Chr5g0079511 RchiOBHm_Chr5g0079791 RchiOBHm_Chr5g0079811 RchiOBHm_Chr5g0079861 RchiOBHm_Chr5g0079881 RchiOBHm_Chr5g0080241 RchiOBHm_Chr5g0080281 RchiOBHm_Chr5g0080371 RchiOBHm_Chr5g0080671 RchiOBHm_Chr6g0256601 RchiOBHm_Chr6g0274791 RchiOBHm_Chr7g0221971 RchiOBHm_Chr7g0221981
rosa_laevigata RLG00000002106 RLG00000013523 RLG00000014806 RLG00000024010 RLG00000035451 RLG00000035455 RLG00000035464 RLG00000035705 RLG00000036094 RLG00000036817 RLG00000036825 RLG00000036826 RLG00000036848
rosa_multiflora Rmu_co8200400.1_g000001 Rmu_co8473147.1_g000001 Rmu_sc0000394.1_g000030 Rmu_sc0000555.1_g000030 Rmu_sc0000595.1_g000002 Rmu_sc0000595.1_g000006 Rmu_sc0000595.1_g000029 Rmu_sc0000689.1_g000018 Rmu_sc0000689.1_g000032 Rmu_sc0000689.1_g000041 Rmu_sc0000738.1_g000025 Rmu_sc0000826.1_g000016 Rmu_sc0000908.1_g000016 Rmu_sc0000908.1_g000019 Rmu_sc0000908.1_g000021 Rmu_sc0001208.1_g000087 Rmu_sc0001639.1_g000004 Rmu_sc0002075.1_g000004 Rmu_sc0002075.1_g000009 Rmu_sc0002187.1_g000042 Rmu_sc0002187.1_g000043 Rmu_sc0002187.1_g000060 Rmu_sc0002513.1_g000025 Rmu_sc0002983.1_g000008 Rmu_sc0003012.1_g000004 Rmu_sc0003069.1_g000019 Rmu_sc0003069.1_g000020 Rmu_sc0003069.1_g000047 Rmu_sc0003069.1_g000051 Rmu_sc0003069.1_g000053 Rmu_sc0003131.1_g000014 Rmu_sc0003514.1_g000003 Rmu_sc0003547.1_g000006 Rmu_sc0003547.1_g000008 Rmu_sc0004325.1_g000021 Rmu_sc0004482.1_g000004 Rmu_sc0004482.1_g000022 Rmu_sc0005006.1_g000004 Rmu_sc0005006.1_g000009 Rmu_sc0005006.1_g000010 Rmu_sc0005194.1_g000002 Rmu_sc0005194.1_g000003 Rmu_sc0005834.1_g000002 Rmu_sc0005947.1_g000023 Rmu_sc0006792.1_g000026 Rmu_sc0007612.1_g000001 Rmu_sc0007793.1_g000024 Rmu_sc0007793.1_g000025 Rmu_sc0008050.1_g000015 Rmu_sc0008336.1_g000003 Rmu_sc0010248.1_g000002 Rmu_sc0011921.1_g000001 Rmu_sc0011921.1_g000006 Rmu_sc0012138.1_g000001 Rmu_sc0016164.1_g000015 Rmu_sc0018807.1_g000005 Rmu_sc0030948.1_g000001 Rmu_sc0042587.1_g000001 Rmu_ssc0000170.1_g000020 Rmu_ssc0000170.1_g000026 Rmu_ssc0000170.1_g000029
rosa_roxburghii Rroxscaffold_1G00003040 Rroxscaffold_1G00003080 Rroxscaffold_1G00003430 Rroxscaffold_1G00003490 Rroxscaffold_1G00011370 Rroxscaffold_1G00016780 Rroxscaffold_1G00019390 Rroxscaffold_1G00019400 Rroxscaffold_1G00019420 Rroxscaffold_1G00021170 Rroxscaffold_3G00237530 Rroxscaffold_3G00246470 Rroxscaffold_4G00301730 Rroxscaffold_4G00309300 Rroxscaffold_6G00398250 Rroxscaffold_6G00398270 Rroxscaffold_6G00398280 Rroxscaffold_6G00408070 Rroxscaffold_7G00193940 Rroxscaffold_7G00209570
rosa_rugosa Rorug01G0237100 Rorug03G0098200 Rorug03G0132200 Rorug03G0132400 Rorug03G0132500 Rorug03G0132500 Rorug03G0132500 Rorug03G0132700 Rorug03G0132800 Rorug03G0205900 Rorug03G0206100 Rorug03G0206100 Rorug03G0206300 Rorug03G0206400 Rorug03G0206400 Rorug03G0240700 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug05G0322400 Rorug05G0339300 Rorug05G0339500 Rorug05G0362200 Rorug05G0362300 Rorug05G0362400 Rorug05G0362600 Rorug05G0362700 Rorug05G0362800 Rorug05G0363100 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0459900 Rorug05G0464600 Rorug05G0465000 Rorug05G0465100 Rorug05G0465200 Rorug05G0466000 Rorug05G0466300 Rorug05G0466400 Rorug05G0466500 Rorug05G0466600 Rorug05G0466700 Rorug05G0466700 Rorug05G0466700 Rorug05G0466800 Rorug05G0466900 Rorug05G0468100 Rorug05G0562200 Rorug05G0562300 Rorug06G0084400 Rorug06G0084500 Rorug06G0084500 Rorug06G0084600 Rorug07G0136400 Rorug07G0204500 Rorug07G0204600 Rorug07G0221500
rosa_samantha Rh5CG438200 Rh5CG569900 Rh6AG080700 Rh7CG362800 Rh7DG275900 Rh7DG343100
rosa_wichuraiana Rw0G004790 Rw0G008160 Rw0G008170 Rw0G008200 Rw0G008210 Rw0G012980 Rw0G013670 Rw0G019920 Rw0G020380 Rw0G022790 Rw0G022800 Rw0G023350 Rw1G005530 Rw1G021740 Rw3G013910 Rw3G015980 Rw3G023020 Rw3G023030 Rw3G025580 Rw5G027180 Rw5G037760 Rw5G037770 Rw5G037780 Rw5G037790 Rw5G037810 Rw5G037820 Rw5G039500 Rw5G039520 Rw5G039530 Rw5G039540 Rw5G039550 Rw5G039570 Rw5G039580 Rw5G039610 Rw5G039630 Rw5G039660 Rw5G042590 Rw5G047840 Rw5G048170 Rw5G048400 Rw5G048470 Rw5G048540 Rw6G007030 Rw6G007080 Rw6G007460 Rw6G017430 Rw7G023150 Rw7G023260 Rw7G029260 Rw7G029270 Rw7G030950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1272, 1781
AatII GACGTC 2 cut(s) 1979, 2967
AccB7I CCANNNNNTGG 2 cut(s) 794, 1906
AccI GTMKAC 2 cut(s) 236, 536
AciI CCGC 4 cut(s) 953, 1284, 2043, 2563
AclWI GGATC 9 cut(s) 134, 314, 968, 1274, 1287, 1763, 1918, 3733, 3737
AcoI YGGCCR 3 cut(s) 2451, 2522, 2579
AcsI RAATTY 9 cut(s) 264, 457, 1504, 1713, 1827, 2673, 2824, 3041, 3209
AcuI CTGAAG 4 cut(s) 453, 561, 1004, 1832
AcyI GRCGYC 2 cut(s) 1976, 2964
AdeI CACNNNGTG 1 cut(s) 176
AfeI AGCGCT 1 cut(s) 3950
AfiI CCNNNNNNNGG 8 cut(s) 149, 692, 794, 1705, 1906, 2531, 2952, 4102
AflII CTTAAG 2 cut(s) 2873, 2912
AflIII ACRYGT 2 cut(s) 1630, 3232
AhlI ACTAGT 2 cut(s) 2768, 3802
AjiI CACGTC 1 cut(s) 3235
AjnI CCWGG 3 cut(s) 63, 2555, 3577
AjuI GAANNNNNNNTTGG 4 cut(s) 183, 215, 2222, 2254
AleI CACNNNNGTG 1 cut(s) 887
Alw21I GWGCWC 4 cut(s) 17, 1642, 2359, 2670
Alw26I GTCTC 5 cut(s) 635, 1967, 2054, 3588, 3658
Alw44I GTGCAC 1 cut(s) 1638
AlwI GGATC 9 cut(s) 134, 314, 968, 1274, 1287, 1763, 1918, 3733, 3737
AlwNI CAGNNNCTG 1 cut(s) 602
Ama87I CYCGRG 1 cut(s) 632
Aor51HI AGCGCT 1 cut(s) 3950
AoxI GGCC 5 cut(s) 61, 202, 2451, 2522, 2579
ApaLI GTGCAC 1 cut(s) 1638
ApeKI GCWGC 8 cut(s) 179, 298, 1382, 2069, 2072, 2250, 3161, 3247
ApoI RAATTY 9 cut(s) 264, 457, 1504, 1713, 1827, 2673, 2824, 3041, 3209
ArsI GACNNNNNNTTYG 2 cut(s) 1301, 1333
Asp700I GAANNNNTTC 3 cut(s) 1713, 1964, 4127
AspLEI GCGC 3 cut(s) 2743, 3951, 4051
AspS9I GGNCC 2 cut(s) 571, 3821
AsuHPI GGTGA 9 cut(s) 12, 404, 847, 895, 1829, 1867, 2492, 3578, 3643
AsuII TTCGAA 1 cut(s) 2443
AvaI CYCGRG 1 cut(s) 632
AvaII GGWCC 2 cut(s) 571, 3821
BaeGI GKGCMC 2 cut(s) 1642, 4097
BalI TGGCCA 3 cut(s) 2453, 2524, 2581
BamHI GGATCC 1 cut(s) 1279
BanII GRGCYC 2 cut(s) 17, 2670
BarI GAAGNNNNNNTAC 2 cut(s) 3341, 3373
BbsI GAAGAC 8 cut(s) 648, 726, 1023, 1314, 1461, 2202, 3378, 3939
Bbv12I GWGCWC 4 cut(s) 17, 1642, 2359, 2670
BbvCI CCTCAGC 1 cut(s) 2190
BbvI GCAGC 8 cut(s) 166, 285, 1369, 2059, 2081, 2237, 3148, 3234
BccI CCATC 9 cut(s) 99, 1615, 1649, 2477, 2529, 2797, 3001, 3257, 3655
BceAI ACGGC 2 cut(s) 1155, 2181
BcgI CGANNNNNNTGC 2 cut(s) 3602, 3636
BciT130I CCWGG 3 cut(s) 65, 2557, 3579
BciVI GTATCC 2 cut(s) 61, 1699
BclI TGATCA 3 cut(s) 1567, 1666, 1674
BcoDI GTCTC 5 cut(s) 635, 1967, 2054, 3588, 3658
BcuI ACTAGT 2 cut(s) 2768, 3802
BfaI CTAG 9 cut(s) 1347, 2388, 2513, 2769, 2816, 2864, 3353, 3803, 3957
BfmI CTRYAG 3 cut(s) 528, 2566, 3985
BfoI RGCGCY 2 cut(s) 3952, 4052
BfrI CTTAAG 2 cut(s) 2873, 2912
BfuI GTATCC 2 cut(s) 61, 1699
BglII AGATCT 2 cut(s) 419, 4039
BisI GCNGC 8 cut(s) 180, 299, 1383, 2070, 2073, 2251, 3162, 3248
BlsI GCNGC 8 cut(s) 181, 300, 1384, 2071, 2074, 2252, 3163, 3249
BmcAI AGTACT 2 cut(s) 1485, 3188
Bme1390I CCNGG 3 cut(s) 65, 2557, 3579
Bme18I GGWCC 2 cut(s) 571, 3821
BmeT110I CYCGRG 1 cut(s) 632
BmgBI CACGTC 1 cut(s) 3235
BmgT120I GGNCC 2 cut(s) 571, 3821
BmiI GGNNCC 3 cut(s) 1281, 2561, 3446
BmrFI CCNGG 3 cut(s) 65, 2557, 3579
BmrI ACTGGG 1 cut(s) 1827
BmuI ACTGGG 1 cut(s) 1827
BoxI GACNNNNGTC 1 cut(s) 1622
BpiI GAAGAC 8 cut(s) 648, 726, 1023, 1314, 1461, 2202, 3378, 3939
BpmI CTGGAG 1 cut(s) 2055
Bpu10I CCTNAGC 2 cut(s) 2190, 2744
Bpu14I TTCGAA 1 cut(s) 2443
BpuEI CTTGAG 5 cut(s) 2279, 2903, 3533, 3581, 3781
BsaAI YACGTR 1 cut(s) 4117
BsaBI GATNNNNATC 1 cut(s) 318
BsaHI GRCGYC 2 cut(s) 1976, 2964
BsaI GGTCTC 3 cut(s) 635, 2054, 3588
BsaJI CCNNGG 5 cut(s) 26, 1536, 1582, 3403, 3578
BsaWI WCCGGW 1 cut(s) 3310
Bsc4I CCNNNNNNNGG 8 cut(s) 149, 692, 794, 1705, 1906, 2531, 2952, 4102
Bse1I ACTGG 6 cut(s) 1372, 1833, 2946, 2974, 3121, 4132
Bse3DI GCAATG 2 cut(s) 1897, 2460
Bse8I GATNNNNATC 1 cut(s) 318
BseBI CCWGG 3 cut(s) 65, 2557, 3579
BseDI CCNNGG 5 cut(s) 26, 1536, 1582, 3403, 3578
BseJI GATNNNNATC 1 cut(s) 318
BseLI CCNNNNNNNGG 8 cut(s) 149, 692, 794, 1705, 1906, 2531, 2952, 4102
BseMI GCAATG 2 cut(s) 1897, 2460
BseMII CTCAG 3 cut(s) 462, 2181, 4080
BseNI ACTGG 6 cut(s) 1372, 1833, 2946, 2974, 3121, 4132
BseRI GAGGAG 2 cut(s) 15, 2531
BseSI GKGCMC 2 cut(s) 1642, 4097
BseXI GCAGC 8 cut(s) 166, 285, 1369, 2059, 2081, 2237, 3148, 3234
BseYI CCCAGC 4 cut(s) 585, 595, 1738, 2571
BsgI GTGCAG 2 cut(s) 3017, 4048
BshFI GGCC 5 cut(s) 63, 204, 2453, 2524, 2581
BsiHKAI GWGCWC 4 cut(s) 17, 1642, 2359, 2670
BsiHKCI CYCGRG 1 cut(s) 632
BsiSI CCGG 2 cut(s) 3311, 4046
BslFI GGGAC 3 cut(s) 923, 1126, 3221
BslI CCNNNNNNNGG 8 cut(s) 149, 692, 794, 1705, 1906, 2531, 2952, 4102
BsmAI GTCTC 5 cut(s) 635, 1967, 2054, 3588, 3658
BsmBI CGTCTC 1 cut(s) 1967
BsmFI GGGAC 3 cut(s) 923, 1126, 3221
BsmI GAATGC 4 cut(s) 278, 1417, 2045, 3640
BsnI GGCC 5 cut(s) 63, 204, 2453, 2524, 2581
Bso31I GGTCTC 3 cut(s) 635, 2054, 3588
BsoBI CYCGRG 1 cut(s) 632
Bsp119I TTCGAA 1 cut(s) 2443
Bsp1286I GDGCHC 5 cut(s) 17, 1642, 2359, 2670, 4097
Bsp19I CCATGG 2 cut(s) 1536, 3403
BspACI CCGC 4 cut(s) 953, 1284, 2043, 2563
BspANI GGCC 5 cut(s) 63, 204, 2453, 2524, 2581
BspCNI CTCAG 3 cut(s) 461, 2182, 4081
BspHI TCATGA 7 cut(s) 373, 868, 1548, 1758, 1993, 2593, 2619
BspLI GGNNCC 3 cut(s) 1281, 2561, 3446
BspPI GGATC 9 cut(s) 134, 314, 968, 1274, 1287, 1763, 1918, 3733, 3737
BspQI GCTCTTC 1 cut(s) 22
BspT104I TTCGAA 1 cut(s) 2443
BspTI CTTAAG 2 cut(s) 2873, 2912
BspTNI GGTCTC 3 cut(s) 635, 2054, 3588
BsrDI GCAATG 2 cut(s) 1897, 2460
BsrI ACTGG 6 cut(s) 1372, 1833, 2946, 2974, 3121, 4132
BssECI CCNNGG 5 cut(s) 26, 1536, 1582, 3403, 3578
BssNI GRCGYC 2 cut(s) 1976, 2964
BssT1I CCWWGG 3 cut(s) 1536, 1582, 3403
Bst2UI CCWGG 3 cut(s) 65, 2557, 3579
Bst4CI ACNGT 8 cut(s) 295, 1117, 1470, 1579, 2005, 2405, 3449, 3901
Bst6I CTCTTC 5 cut(s) 22, 393, 2280, 3513, 3899
BstACI GRCGYC 2 cut(s) 1976, 2964
BstAFI CTTAAG 2 cut(s) 2873, 2912
BstAPI GCANNNNNTGC 1 cut(s) 1896
BstBAI YACGTR 1 cut(s) 4117
BstBI TTCGAA 1 cut(s) 2443
BstC8I GCNNGC 5 cut(s) 1533, 3166, 3170, 3593, 3982
BstDSI CCRYGG 2 cut(s) 1536, 3403
BstENI CCTNNNNNAGG 1 cut(s) 147
BstH2I RGCGCY 2 cut(s) 3952, 4052
BstHHI GCGC 3 cut(s) 2743, 3951, 4051
BstMAI GTCTC 5 cut(s) 635, 1967, 2054, 3588, 3658
BstMWI GCNNNNNNNGC 8 cut(s) 1196, 1896, 2066, 2638, 3833, 3957, 3996, 4237
BstNI CCWGG 3 cut(s) 65, 2557, 3579
BstNSI RCATGY 2 cut(s) 1634, 3168
BstPAI GACNNNNGTC 1 cut(s) 1622
BstSCI CCNGG 3 cut(s) 63, 2555, 3577
BstSFI CTRYAG 3 cut(s) 528, 2566, 3985
BstSLI GKGCMC 2 cut(s) 1642, 4097
BstV1I GCAGC 8 cut(s) 166, 285, 1369, 2059, 2081, 2237, 3148, 3234
BstV2I GAAGAC 8 cut(s) 648, 726, 1023, 1314, 1461, 2202, 3378, 3939
BstX2I RGATCY 6 cut(s) 419, 973, 1279, 1923, 3725, 4039
BstYI RGATCY 6 cut(s) 419, 973, 1279, 1923, 3725, 4039
BsuI GTATCC 2 cut(s) 61, 1699
BsuRI GGCC 5 cut(s) 63, 204, 2453, 2524, 2581
BtgI CCRYGG 2 cut(s) 1536, 3403
BtrI CACGTC 1 cut(s) 3235
BtsI GCAGTG 2 cut(s) 99, 2780
BtsIMutI CAGTG 8 cut(s) 99, 1238, 1379, 1575, 2780, 2967, 3419, 4065
Cac8I GCNNGC 5 cut(s) 1533, 3166, 3170, 3593, 3982
CaiI CAGNNNCTG 1 cut(s) 602
CciI TCATGA 7 cut(s) 373, 868, 1548, 1758, 1993, 2593, 2619
CfoI GCGC 3 cut(s) 2743, 3951, 4051
Cfr13I GGNCC 2 cut(s) 571, 3821
CseI GACGC 1 cut(s) 2207
DraI TTTAAA 1 cut(s) 3132
DraIII CACNNNGTG 1 cut(s) 176
EaeI YGGCCR 3 cut(s) 2451, 2522, 2579
Eam1104I CTCTTC 5 cut(s) 22, 393, 2280, 3513, 3899
EarI CTCTTC 5 cut(s) 22, 393, 2280, 3513, 3899
EciI GGCGGA 1 cut(s) 942
Ecl136II GAGCTC 2 cut(s) 15, 2668
Eco130I CCWWGG 3 cut(s) 1536, 1582, 3403
Eco24I GRGCYC 2 cut(s) 17, 2670
Eco31I GGTCTC 3 cut(s) 635, 2054, 3588
Eco32I GATATC 4 cut(s) 1298, 2275, 2978, 3006
Eco47I GGWCC 2 cut(s) 571, 3821
Eco47III AGCGCT 1 cut(s) 3950
Eco53kI GAGCTC 2 cut(s) 15, 2668
Eco57I CTGAAG 4 cut(s) 453, 561, 1004, 1832
Eco88I CYCGRG 1 cut(s) 632
EcoICRI GAGCTC 2 cut(s) 15, 2668
EcoNI CCTNNNNNAGG 1 cut(s) 147
EcoRI GAATTC 3 cut(s) 264, 457, 1827
EcoRII CCWGG 3 cut(s) 63, 2555, 3577
EcoRV GATATC 4 cut(s) 1298, 2275, 2978, 3006
EcoT14I CCWWGG 3 cut(s) 1536, 1582, 3403
EcoT22I ATGCAT 4 cut(s) 232, 278, 2423, 3224
EcoT38I GRGCYC 2 cut(s) 17, 2670
ErhI CCWWGG 3 cut(s) 1536, 1582, 3403
Esp3I CGTCTC 1 cut(s) 1967
FalI AAGNNNNNCTT 8 cut(s) 711, 743, 903, 935, 1644, 1676, 2222, 2254
FaqI GGGAC 3 cut(s) 923, 1126, 3221
FauI CCCGC 1 cut(s) 1291
FauNDI CATATG 1 cut(s) 3812
FbaI TGATCA 3 cut(s) 1567, 1666, 1674
FblI GTMKAC 2 cut(s) 236, 536
Fnu4HI GCNGC 8 cut(s) 180, 299, 1383, 2070, 2073, 2251, 3162, 3248
FriOI GRGCYC 2 cut(s) 17, 2670
Fsp4HI GCNGC 8 cut(s) 180, 299, 1383, 2070, 2073, 2251, 3162, 3248
FspBI CTAG 9 cut(s) 1347, 2388, 2513, 2769, 2816, 2864, 3353, 3803, 3957
GlaI GCGC 3 cut(s) 2742, 3950, 4050
GluI GCNGC 8 cut(s) 180, 299, 1383, 2070, 2073, 2251, 3162, 3248
GsaI CCCAGC 4 cut(s) 589, 599, 1742, 2575
GsuI CTGGAG 1 cut(s) 2055
HaeII RGCGCY 2 cut(s) 3952, 4052
HaeIII GGCC 5 cut(s) 63, 204, 2453, 2524, 2581
HapII CCGG 2 cut(s) 3311, 4046
HgaI GACGC 1 cut(s) 2207
HhaI GCGC 3 cut(s) 2743, 3951, 4051
Hin1I GRCGYC 2 cut(s) 1976, 2964
Hin6I GCGC 3 cut(s) 2741, 3949, 4049
HinP1I GCGC 3 cut(s) 2741, 3949, 4049
HincII GTYRAC 4 cut(s) 237, 537, 2179, 3114
HindII GTYRAC 4 cut(s) 237, 537, 2179, 3114
HindIII AAGCTT 3 cut(s) 1326, 2382, 2639
HpaII CCGG 2 cut(s) 3311, 4046
HphI GGTGA 9 cut(s) 12, 404, 847, 895, 1829, 1867, 2492, 3578, 3643
Hpy166II GTNNAC 9 cut(s) 237, 537, 1640, 2179, 2510, 3114, 3148, 3360, 4177
Hpy8I GTNNAC 9 cut(s) 237, 537, 1640, 2179, 2510, 3114, 3148, 3360, 4177
Hpy99I CGWCG 4 cut(s) 238, 1438, 1621, 1981
HpyCH4III ACNGT 8 cut(s) 295, 1117, 1470, 1579, 2005, 2405, 3449, 3901
HpyCH4IV ACGT 7 cut(s) 1095, 1724, 1976, 2964, 3234, 4016, 4116
HpyF10VI GCNNNNNNNGC 8 cut(s) 1196, 1896, 2066, 2638, 3833, 3957, 3996, 4237
HpySE526I ACGT 7 cut(s) 1095, 1724, 1976, 2964, 3234, 4016, 4116
Hsp92I GRCGYC 2 cut(s) 1976, 2964
HspAI GCGC 3 cut(s) 2741, 3949, 4049
Ksp22I TGATCA 3 cut(s) 1567, 1666, 1674
LguI GCTCTTC 1 cut(s) 22
LmnI GCTCC 4 cut(s) 604, 2565, 3255, 3832
Lsp1109I GCAGC 8 cut(s) 166, 285, 1369, 2059, 2081, 2237, 3148, 3234
MaeI CTAG 9 cut(s) 1347, 2388, 2513, 2769, 2816, 2864, 3353, 3803, 3957
MaeII ACGT 7 cut(s) 1095, 1724, 1976, 2964, 3234, 4016, 4116
MfeI CAATTG 1 cut(s) 2280
MflI RGATCY 6 cut(s) 419, 973, 1279, 1923, 3725, 4039
MhlI GDGCHC 5 cut(s) 17, 1642, 2359, 2670, 4097
MlsI TGGCCA 3 cut(s) 2453, 2524, 2581
MluNI TGGCCA 3 cut(s) 2453, 2524, 2581
MlyI GAGTC 4 cut(s) 542, 1813, 3277, 3978
MmeI TCCRAC 7 cut(s) 1158, 1257, 1457, 1588, 2940, 3105, 3909
Mox20I TGGCCA 3 cut(s) 2453, 2524, 2581
Mph1103I ATGCAT 4 cut(s) 232, 278, 2423, 3224
MroXI GAANNNNTTC 3 cut(s) 1713, 1964, 4127
MscI TGGCCA 3 cut(s) 2453, 2524, 2581
MslI CAYNNNNRTG 4 cut(s) 887, 1635, 2426, 4182
Msp20I TGGCCA 3 cut(s) 2453, 2524, 2581
MspA1I CMGCKG 4 cut(s) 965, 1286, 2072, 2571
MspCI CTTAAG 2 cut(s) 2873, 2912
MspI CCGG 2 cut(s) 3311, 4046
MspR9I CCNGG 3 cut(s) 65, 2557, 3579
MunI CAATTG 1 cut(s) 2280
Mva1269I GAATGC 4 cut(s) 278, 1417, 2045, 3640
MvaI CCWGG 3 cut(s) 65, 2557, 3579
MwoI GCNNNNNNNGC 8 cut(s) 1196, 1896, 2066, 2638, 3833, 3957, 3996, 4237
NcoI CCATGG 2 cut(s) 1536, 3403
NdeI CATATG 1 cut(s) 3812
NlaIV GGNNCC 3 cut(s) 1281, 2561, 3446
NmuCI GTSAC 7 cut(s) 392, 853, 889, 1573, 1835, 2079, 2965
NsiI ATGCAT 4 cut(s) 232, 278, 2423, 3224
NspI RCATGY 2 cut(s) 1634, 3168
NspV TTCGAA 1 cut(s) 2443
OliI CACNNNNGTG 1 cut(s) 887
PaeI GCATGC 1 cut(s) 3168
PagI TCATGA 7 cut(s) 373, 868, 1548, 1758, 1993, 2593, 2619
PciI ACATGT 1 cut(s) 1630
PciSI GCTCTTC 1 cut(s) 22
PctI GAATGC 4 cut(s) 278, 1417, 2045, 3640
PdmI GAANNNNTTC 3 cut(s) 1713, 1964, 4127
PflFI GACNNNGTC 1 cut(s) 3968
PflMI CCANNNNNTGG 2 cut(s) 794, 1906
PkrI GCNGC 8 cut(s) 181, 300, 1384, 2071, 2074, 2252, 3163, 3249
PleI GAGTC 4 cut(s) 541, 1812, 3277, 3977
PpsI GAGTC 4 cut(s) 541, 1812, 3277, 3977
Ppu21I YACGTR 1 cut(s) 4117
PscI ACATGT 1 cut(s) 1630
PshAI GACNNNNGTC 1 cut(s) 1622
PsiI TTATAA 2 cut(s) 1272, 1781
Psp124BI GAGCTC 2 cut(s) 17, 2670
Psp6I CCWGG 3 cut(s) 63, 2555, 3577
PspFI CCCAGC 4 cut(s) 585, 595, 1738, 2571
PspGI CCWGG 3 cut(s) 63, 2555, 3577
PspN4I GGNNCC 3 cut(s) 1281, 2561, 3446
PspPI GGNCC 2 cut(s) 571, 3821
PstNI CAGNNNCTG 1 cut(s) 602
PsuI RGATCY 6 cut(s) 419, 973, 1279, 1923, 3725, 4039
PsyI GACNNNGTC 1 cut(s) 3968
PvuII CAGCTG 3 cut(s) 965, 2072, 2571
RseI CAYNNNNRTG 4 cut(s) 887, 1635, 2426, 4182
SacI GAGCTC 2 cut(s) 17, 2670
SalI GTCGAC 2 cut(s) 235, 535
SapI GCTCTTC 1 cut(s) 22
SatI GCNGC 8 cut(s) 180, 299, 1383, 2070, 2073, 2251, 3162, 3248
Sau96I GGNCC 2 cut(s) 571, 3821
ScaI AGTACT 2 cut(s) 1485, 3188
SchI GAGTC 4 cut(s) 542, 1813, 3277, 3978
ScrFI CCNGG 3 cut(s) 65, 2557, 3579
SduI GDGCHC 5 cut(s) 17, 1642, 2359, 2670, 4097
SfcI CTRYAG 3 cut(s) 528, 2566, 3985
SfuI TTCGAA 1 cut(s) 2443
SinI GGWCC 2 cut(s) 571, 3821
SmiMI CAYNNNNRTG 4 cut(s) 887, 1635, 2426, 4182
SmlI CTYRAG 7 cut(s) 2294, 2873, 2882, 2912, 3548, 3596, 3760
SmoI CTYRAG 7 cut(s) 2294, 2873, 2882, 2912, 3548, 3596, 3760
SpeI ACTAGT 2 cut(s) 2768, 3802
SphI GCATGC 1 cut(s) 3168
SsiI CCGC 4 cut(s) 953, 1284, 2043, 2563
SspI AATATT 2 cut(s) 2651, 3754
SspMI CTAG 9 cut(s) 1347, 2388, 2513, 2769, 2816, 2864, 3353, 3803, 3957
SstI GAGCTC 2 cut(s) 17, 2670
StyD4I CCNGG 3 cut(s) 63, 2555, 3577
StyI CCWWGG 3 cut(s) 1536, 1582, 3403
TaaI ACNGT 8 cut(s) 295, 1117, 1470, 1579, 2005, 2405, 3449, 3901
TaiI ACGT 7 cut(s) 1098, 1727, 1979, 2967, 3237, 4019, 4119
TaqI TCGA 8 cut(s) 73, 194, 236, 536, 1146, 1817, 2443, 4158
TatI WGTACW 4 cut(s) 1483, 3186, 3357, 3531
TscAI CASTG 8 cut(s) 106, 1238, 1379, 1582, 2787, 2974, 3426, 4072
TseFI GTSAC 7 cut(s) 392, 853, 889, 1573, 1835, 2079, 2965
TseI GCWGC 8 cut(s) 179, 298, 1382, 2069, 2072, 2250, 3161, 3247
Tsp45I GTSAC 7 cut(s) 392, 853, 889, 1573, 1835, 2079, 2965
TspGWI ACGGA 4 cut(s) 1451, 2848, 3819, 3981
TspRI CASTG 8 cut(s) 106, 1238, 1379, 1582, 2787, 2974, 3426, 4072
Tth111I GACNNNGTC 1 cut(s) 3968
Van91I CCANNNNNTGG 2 cut(s) 794, 1906
Vha464I CTTAAG 2 cut(s) 2873, 2912
VneI GTGCAC 1 cut(s) 1638
VpaK11BI GGWCC 2 cut(s) 571, 3821
XagI CCTNNNNNAGG 1 cut(s) 147
XapI RAATTY 9 cut(s) 264, 457, 1504, 1713, 1827, 2673, 2824, 3041, 3209
XbaI TCTAGA 1 cut(s) 2387
XceI RCATGY 2 cut(s) 1634, 3168
XcmI CCANNNNNNNNNTGG 2 cut(s) 603, 2532
XmiI GTMKAC 2 cut(s) 236, 536
XmnI GAANNNNTTC 3 cut(s) 1713, 1964, 4127
XspI CTAG 9 cut(s) 1347, 2388, 2513, 2769, 2816, 2864, 3353, 3803, 3957
ZraI GACGTC 2 cut(s) 1977, 2965
ZrmI AGTACT 2 cut(s) 1485, 3188
Zsp2I ATGCAT 4 cut(s) 232, 278, 2423, 3224
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.