Rmu_sc0002983.1_g000008

Disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002983.1
OG0000085
Physical Location & Seq
Reverse (-)
23851 .. 28664
4814 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002983.1_g000008.1.cds

Sequence Viewer

Length: 3102 bp
atgtccacaggagattttaaagcatttgaagcaacaaagcaagccatgaataaggtaatgaatgcgctaaatgatgatgaggtcactgtggttggggtctacggaatgggaggcgttggaaagacaaccatggtgaaacatgtcggtgcacaagtgaagaaaagtagactttttaatcaagtgattatggctgtagtatcacaaaaccctgacttgaggaaaattcaaggcacattagcagatttgctggacttgaaattggaggatgagacagaaataggaagagctagtagattggaggagaagataaaaggaggaaccaggattctcataatcttggatgacgtttggaatagaatagaattttcaagcataggaattcccagccaccacaaacttcaaagatgcaattccaaagtcctactcaccacaaggagattttctgtatgtcatttcatgaacagccatgtaaacattccactcaatatcctatcagaagaagattcttggaacttgtttgtgacagaagcaagacaatcttttgacaaatccaccaatttctatgatgtagcaaggatggtggctagagaatgcgctggtcttccagttgcactgatagcagttgcgagggcacttcgacatgcaagtttcaatgaatggaaagactcggctcaacgactaaaggcgtctcaacctgccaaccctgaagatgagggagatgtgtacgaatgcataaagttaagctatgattacttgaaaactgatgattcaaaatcatgcttcttactttgctgcctgttcccagaggattatgacatcccagttgaacagttactgaagtatggaattgggaaaggaatgtttcaagattccaacatgcaagaagccagaggcacaacacatttagtggtcaagtcccttaaagcttctagcttgcttctggactcaaaaaaggatggatatgtaaagatgcatgatgtcattcgggatgtggctgtattgatttcgctatctgaagttggtcaacgggttttggtaaaagctggttgcgacttaaagcattggccaatgattaacgcgcatagaggcttctttgcaatttcactaatgaagaatgaaatccgcaagctacctgaagagttggtatgtccaaaccttaagattttattactacaacataatgctaatttaaatgacatacccgagacttttctccaaaccctgaatgaactaagagtcttagatcttagccacactagtatttcattaccaccccaatcattcagtctcctgaccaatctccaagctttgtatttagattgttgcatgaaaatcattgacttttccatactcggaaaacttgagaagcttgagattcttagtatgagggaatatcctcttaaagaattgtcgagagaaataggacgcttgaccaatctaagaatgctggatgtcagtgatagtttcagccatggacatattgttacaattccatctaaagtgatatcaaagttgcatagactagaagaactgtacatgcattgcagatttggggactggggaagtaaagtcgaggaaggaggagaagagactaatattggatttgatgagttaactggcttatcatatttatacattttgacggttcgcatatgggatgcaaaatgtttgcctaaatgtgttgagttcaatccaaattgggtttactttgatatctgtttcggtggagaaagaagagtgccgcacattcagtctcagaatggtcataaatattccagatccttgattcttaacacgaccatctgccgcttaccggattggtttgtcagtgtggtgacaaagaaaacagagaagctacagtttgcaaaatgcgaagggttaaataacattcttgtggaatatgaccgtggggggttatgcgggctgaagcatctctctattattggtccctgtgagaagttgaaagagctgatgaacacaataagttggattccaaataaacctgtgttcgagaacttggaggagttgcacttggatggtgtggattgcctaaatgaattatgtgttggtgaattaccacctgggtctttgtttaatcttaagctgttgaatgtctgtaattgtcgtaacttggggaatgtactgttgccatcaaaactgttacggaaactaccaaacttggaaaagttgatttgcaatgttatgggtagcatggaatatgtattcgggtacgaagggtttgagccagaagaatcaaaattcagagagatgacattgttgagtctgtatgctctaaaaagcgtatgtaacggtcctgctccttgtacaatattccggactcttaaaagtttgatcatttaccattgcgatcagcttcaaggaagcctcttcacatctgatgtagctcagtgcctttatcatctggaagacctttttgtattcagttgccctttcttgaaaaaattaattgaagcaagcgaggaaacagtgagcaagaagaagattgttcttccaaaattgaagagcttagttttgctgatgcttccaaggctgtctagtgaaagtgctattggtattgagtcaccttcattggtacatttgtatgtccagtattgccccaacttttcgaatgatgctattaacttccacagcaagaaccaagtccaactcaatgatgaacgacaaatgaggtttctatggtcgagtgccgtaggcccctgcagccttcttggaccgcccttacacctctgctgcccctgcagcatcacagcatgctcgctgcccctgcagcaccgccgcacccacgttgcatccttctcctctagttcctgtgcatatcagtcctggaagctgttcaaaagagaatctgctccgaatttcaacaaccctagccgcaacgcaccagtagcctcgcagccctgcagcatcgctcccgtaactcaccagcagcctcacagccccgcagcagcgctcccgcaactcaccagcagccccgcaacactgctaccttgcatacacgctgccactgcagtccctgctgccctgcatatccgacaccgctacaagctctgccccatcacgcctgcatcaatactcgcgtga

Protein Analysis

1033

Amino Acids

116.07

Weight (kDa)

7.89

Isoelectric Point (pI)

46.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000085)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g05721 FvH4_2g05721 FvH4_3g35820 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35920 FvH4_3g38670 FvH4_3g43650 FvH4_3g43650 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44070 FvH4_5g01271 FvH4_5g02970 FvH4_5g02970 FvH4_5g02970 FvH4_5g27640 FvH4_5g27640 FvH4_5g27640 FvH4_6g05393 FvH4_6g52372 FvH4_7g06680 FvH4_7g12671 FvH4_7g13640 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31510
malus_domestica MD09G1227900.v1.1 MD11G1019800.v1.1 MD11G1020500.v1.1
prunus_persica Prupe.1G542800_v2.0.a1 Prupe.1G542800_v2.0.a1
pyrus_communis pycom11g01460 pycom11g01490 pycom11g01530 pycom11g01570 pycom15g35490
rosa_chinensis RchiOBHm_Chr1g0353711 RchiOBHm_Chr3g0473211 RchiOBHm_Chr3g0473291 RchiOBHm_Chr3g0473341 RchiOBHm_Chr3g0473381 RchiOBHm_Chr3g0473391 RchiOBHm_Chr3g0473441 RchiOBHm_Chr3g0473481 RchiOBHm_Chr3g0473531 RchiOBHm_Chr3g0473561 RchiOBHm_Chr3g0473571 RchiOBHm_Chr3g0483491 RchiOBHm_Chr3g0488681 RchiOBHm_Chr5g0059311 RchiOBHm_Chr5g0061291 RchiOBHm_Chr5g0061301 RchiOBHm_Chr5g0061331 RchiOBHm_Chr5g0064081 RchiOBHm_Chr5g0064111 RchiOBHm_Chr5g0064151 RchiOBHm_Chr5g0064171 RchiOBHm_Chr5g0069721 RchiOBHm_Chr5g0069731 RchiOBHm_Chr5g0069741 RchiOBHm_Chr5g0078251 RchiOBHm_Chr5g0078301 RchiOBHm_Chr5g0079511 RchiOBHm_Chr5g0079791 RchiOBHm_Chr5g0079811 RchiOBHm_Chr5g0079861 RchiOBHm_Chr5g0079881 RchiOBHm_Chr5g0080241 RchiOBHm_Chr5g0080281 RchiOBHm_Chr5g0080371 RchiOBHm_Chr5g0080671 RchiOBHm_Chr6g0256601 RchiOBHm_Chr6g0274791 RchiOBHm_Chr7g0221971 RchiOBHm_Chr7g0221981
rosa_laevigata RLG00000002106 RLG00000013523 RLG00000014806 RLG00000024010 RLG00000035451 RLG00000035455 RLG00000035464 RLG00000035705 RLG00000036094 RLG00000036817 RLG00000036825 RLG00000036826 RLG00000036848
rosa_multiflora Rmu_co8200400.1_g000001 Rmu_co8473147.1_g000001 Rmu_sc0000394.1_g000030 Rmu_sc0000555.1_g000030 Rmu_sc0000595.1_g000002 Rmu_sc0000595.1_g000006 Rmu_sc0000595.1_g000029 Rmu_sc0000689.1_g000018 Rmu_sc0000689.1_g000032 Rmu_sc0000689.1_g000041 Rmu_sc0000738.1_g000025 Rmu_sc0000826.1_g000016 Rmu_sc0000908.1_g000016 Rmu_sc0000908.1_g000019 Rmu_sc0000908.1_g000021 Rmu_sc0001208.1_g000087 Rmu_sc0001639.1_g000004 Rmu_sc0002075.1_g000004 Rmu_sc0002075.1_g000009 Rmu_sc0002187.1_g000042 Rmu_sc0002187.1_g000043 Rmu_sc0002187.1_g000060 Rmu_sc0002513.1_g000025 Rmu_sc0002983.1_g000008 Rmu_sc0003012.1_g000004 Rmu_sc0003069.1_g000019 Rmu_sc0003069.1_g000020 Rmu_sc0003069.1_g000047 Rmu_sc0003069.1_g000051 Rmu_sc0003069.1_g000053 Rmu_sc0003131.1_g000014 Rmu_sc0003514.1_g000003 Rmu_sc0003547.1_g000006 Rmu_sc0003547.1_g000008 Rmu_sc0004325.1_g000021 Rmu_sc0004482.1_g000004 Rmu_sc0004482.1_g000022 Rmu_sc0005006.1_g000004 Rmu_sc0005006.1_g000009 Rmu_sc0005006.1_g000010 Rmu_sc0005194.1_g000002 Rmu_sc0005194.1_g000003 Rmu_sc0005834.1_g000002 Rmu_sc0005947.1_g000023 Rmu_sc0006792.1_g000026 Rmu_sc0007612.1_g000001 Rmu_sc0007793.1_g000024 Rmu_sc0007793.1_g000025 Rmu_sc0008050.1_g000015 Rmu_sc0008336.1_g000003 Rmu_sc0010248.1_g000002 Rmu_sc0011921.1_g000001 Rmu_sc0011921.1_g000006 Rmu_sc0012138.1_g000001 Rmu_sc0016164.1_g000015 Rmu_sc0018807.1_g000005 Rmu_sc0030948.1_g000001 Rmu_sc0042587.1_g000001 Rmu_ssc0000170.1_g000020 Rmu_ssc0000170.1_g000026 Rmu_ssc0000170.1_g000029
rosa_roxburghii Rroxscaffold_1G00003040 Rroxscaffold_1G00003080 Rroxscaffold_1G00003430 Rroxscaffold_1G00003490 Rroxscaffold_1G00011370 Rroxscaffold_1G00016780 Rroxscaffold_1G00019390 Rroxscaffold_1G00019400 Rroxscaffold_1G00019420 Rroxscaffold_1G00021170 Rroxscaffold_3G00237530 Rroxscaffold_3G00246470 Rroxscaffold_4G00301730 Rroxscaffold_4G00309300 Rroxscaffold_6G00398250 Rroxscaffold_6G00398270 Rroxscaffold_6G00398280 Rroxscaffold_6G00408070 Rroxscaffold_7G00193940 Rroxscaffold_7G00209570
rosa_rugosa Rorug01G0237100 Rorug03G0098200 Rorug03G0132200 Rorug03G0132400 Rorug03G0132500 Rorug03G0132500 Rorug03G0132500 Rorug03G0132700 Rorug03G0132800 Rorug03G0205900 Rorug03G0206100 Rorug03G0206100 Rorug03G0206300 Rorug03G0206400 Rorug03G0206400 Rorug03G0240700 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug05G0322400 Rorug05G0339300 Rorug05G0339500 Rorug05G0362200 Rorug05G0362300 Rorug05G0362400 Rorug05G0362600 Rorug05G0362700 Rorug05G0362800 Rorug05G0363100 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0459900 Rorug05G0464600 Rorug05G0465000 Rorug05G0465100 Rorug05G0465200 Rorug05G0466000 Rorug05G0466300 Rorug05G0466400 Rorug05G0466500 Rorug05G0466600 Rorug05G0466700 Rorug05G0466700 Rorug05G0466700 Rorug05G0466800 Rorug05G0466900 Rorug05G0468100 Rorug05G0562200 Rorug05G0562300 Rorug06G0084400 Rorug06G0084500 Rorug06G0084500 Rorug06G0084600 Rorug07G0136400 Rorug07G0204500 Rorug07G0204600 Rorug07G0221500
rosa_samantha Rh5CG438200 Rh5CG569900 Rh6AG080700 Rh7CG362800 Rh7DG275900 Rh7DG343100
rosa_wichuraiana Rw0G004790 Rw0G008160 Rw0G008170 Rw0G008200 Rw0G008210 Rw0G012980 Rw0G013670 Rw0G019920 Rw0G020380 Rw0G022790 Rw0G022800 Rw0G023350 Rw1G005530 Rw1G021740 Rw3G013910 Rw3G015980 Rw3G023020 Rw3G023030 Rw3G025580 Rw5G027180 Rw5G037760 Rw5G037770 Rw5G037780 Rw5G037790 Rw5G037810 Rw5G037820 Rw5G039500 Rw5G039520 Rw5G039530 Rw5G039540 Rw5G039550 Rw5G039570 Rw5G039580 Rw5G039610 Rw5G039630 Rw5G039660 Rw5G042590 Rw5G047840 Rw5G048170 Rw5G048400 Rw5G048470 Rw5G048540 Rw6G007030 Rw6G007080 Rw6G007460 Rw6G017430 Rw7G023150 Rw7G023260 Rw7G029260 Rw7G029270 Rw7G030950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 703
AccI GTMKAC 2 cut(s) 99, 166
AccII CGCG 2 cut(s) 1079, 3098
AccIII TCCGGA 1 cut(s) 2334
AclWI GGATC 1 cut(s) 1773
AcoI YGGCCR 1 cut(s) 1064
AcsI RAATTY 5 cut(s) 222, 362, 378, 2258, 2875
AcuI CTGAAG 5 cut(s) 726, 857, 1035, 1155, 1946
AcyI GRCGYC 1 cut(s) 686
AfaI GTAC 6 cut(s) 725, 1535, 2142, 2231, 2326, 2595
AfeI AGCGCT 1 cut(s) 2970
AfiI CCNNNNNNNGG 1 cut(s) 1813
AflII CTTAAG 2 cut(s) 1157, 2099
AflIII ACRYGT 1 cut(s) 139
AhlI ACTAGT 1 cut(s) 1256
AjnI CCWGG 3 cut(s) 320, 2080, 2843
AjuI GAANNNNNNNTTGG 4 cut(s) 2049, 2081, 2553, 2585
Alw21I GWGCWC 1 cut(s) 151
Alw26I GTCTC 6 cut(s) 263, 693, 1199, 1292, 1583, 1758
Alw44I GTGCAC 1 cut(s) 147
AlwI GGATC 1 cut(s) 1773
AlwNI CAGNNNCTG 2 cut(s) 835, 3035
Ama87I CYCGRG 1 cut(s) 1202
Aor13HI TCCGGA 1 cut(s) 2334
Aor51HI AGCGCT 1 cut(s) 2970
AoxI GGCC 2 cut(s) 1064, 2713
ApaLI GTGCAC 1 cut(s) 147
ApoI RAATTY 5 cut(s) 222, 362, 378, 2258, 2875
AseI ATTAAT 1 cut(s) 2465
Asp700I GAANNNNTTC 1 cut(s) 2852
AspLEI GCGC 4 cut(s) 67, 596, 1081, 2971
AspS9I GGNCC 4 cut(s) 1946, 2312, 2714, 2732
AsuHPI GGTGA 7 cut(s) 145, 418, 1846, 2081, 2574, 2933, 2974
AsuII TTCGAA 1 cut(s) 2627
AvaI CYCGRG 1 cut(s) 1202
AvaII GGWCC 3 cut(s) 1946, 2312, 2732
BaeGI GKGCMC 2 cut(s) 151, 634
BaeI ACNNNNGTAYC 2 cut(s) 2585, 2618
BalI TGGCCA 1 cut(s) 1066
BbsI GAAGAC 2 cut(s) 593, 2433
Bbv12I GWGCWC 1 cut(s) 151
BccI CCATC 7 cut(s) 571, 950, 1501, 1808, 2030, 2158, 3083
BceAI ACGGC 1 cut(s) 2693
BciT130I CCWGG 3 cut(s) 322, 2082, 2845
BclI TGATCA 1 cut(s) 2352
BcoDI GTCTC 6 cut(s) 263, 693, 1199, 1292, 1583, 1758
BcuI ACTAGT 1 cut(s) 1256
BfaI CTAG 8 cut(s) 288, 585, 930, 1257, 1523, 2556, 2823, 2889
BfmI CTRYAG 7 cut(s) 192, 1856, 2719, 2758, 2786, 2920, 3027
BfoI RGCGCY 1 cut(s) 2972
BfrI CTTAAG 2 cut(s) 1157, 2099
BfuAI ACCTGC 1 cut(s) 703
BglII AGATCT 1 cut(s) 1243
Bme1390I CCNGG 3 cut(s) 322, 2082, 2845
Bme18I GGWCC 3 cut(s) 1946, 2312, 2732
BmeT110I CYCGRG 1 cut(s) 1202
BmgT120I GGNCC 4 cut(s) 1946, 2312, 2714, 2732
BmiI GGNNCC 3 cut(s) 319, 1948, 2716
BmrFI CCNGG 3 cut(s) 322, 2082, 2845
BmrI ACTGGG 2 cut(s) 815, 1567
BmuI ACTGGG 2 cut(s) 815, 1567
BpiI GAAGAC 2 cut(s) 593, 2433
Bpu14I TTCGAA 1 cut(s) 2627
BpuEI CTTGAG 3 cut(s) 235, 1382, 1391
BsaHI GRCGYC 1 cut(s) 686
BsaJI CCNNGG 5 cut(s) 129, 1471, 1906, 2081, 2546
BsaWI WCCGGW 2 cut(s) 1813, 2334
Bsc4I CCNNNNNNNGG 1 cut(s) 1813
Bse1I ACTGG 6 cut(s) 605, 821, 1562, 1621, 2608, 2903
Bse3DI GCAATG 3 cut(s) 1540, 2203, 2362
BseAI TCCGGA 1 cut(s) 2334
BseBI CCWGG 3 cut(s) 322, 2082, 2845
BseDI CCNNGG 5 cut(s) 129, 1471, 1906, 2081, 2546
BseLI CCNNNNNNNGG 1 cut(s) 1813
BseMI GCAATG 3 cut(s) 1540, 2203, 2362
BseMII CTCAG 2 cut(s) 1769, 2420
BseNI ACTGG 6 cut(s) 605, 821, 1562, 1621, 2608, 2903
BseRI GAGGAG 4 cut(s) 314, 1596, 2036, 2809
BseSI GKGCMC 2 cut(s) 151, 634
BseYI CCCAGC 1 cut(s) 383
Bsh1236I CGCG 2 cut(s) 1079, 3098
BshFI GGCC 2 cut(s) 1066, 2715
BsiHKAI GWGCWC 1 cut(s) 151
BsiHKCI CYCGRG 1 cut(s) 1202
BsiSI CCGG 2 cut(s) 1814, 2335
BslFI GGGAC 4 cut(s) 901, 1568, 1932, 3017
BslI CCNNNNNNNGG 1 cut(s) 1813
BsmAI GTCTC 6 cut(s) 263, 693, 1199, 1292, 1583, 1758
BsmBI CGTCTC 1 cut(s) 693
BsmFI GGGAC 4 cut(s) 901, 1568, 1932, 3017
BsmI GAATGC 4 cut(s) 67, 596, 734, 1449
BsnI GGCC 2 cut(s) 1066, 2715
BsoBI CYCGRG 1 cut(s) 1202
Bsp119I TTCGAA 1 cut(s) 2627
Bsp1286I GDGCHC 2 cut(s) 151, 634
Bsp13I TCCGGA 1 cut(s) 2334
Bsp1407I TGTACA 2 cut(s) 1533, 2324
Bsp143I GATC 4 cut(s) 1243, 1778, 2352, 2368
Bsp19I CCATGG 2 cut(s) 129, 1471
BspANI GGCC 2 cut(s) 1066, 2715
BspCNI CTCAG 2 cut(s) 1768, 2419
BspEI TCCGGA 1 cut(s) 2334
BspFNI CGCG 2 cut(s) 1079, 3098
BspHI TCATGA 1 cut(s) 456
BspLI GGNNCC 3 cut(s) 319, 1948, 2716
BspMAI CTGCAG 5 cut(s) 2723, 2762, 2790, 2924, 3031
BspMI ACCTGC 1 cut(s) 703
BspPI GGATC 1 cut(s) 1773
BspQI GCTCTTC 2 cut(s) 277, 2516
BspT104I TTCGAA 1 cut(s) 2627
BspTI CTTAAG 2 cut(s) 1157, 2099
BsrDI GCAATG 3 cut(s) 1540, 2203, 2362
BsrGI TGTACA 2 cut(s) 1533, 2324
BsrI ACTGG 6 cut(s) 605, 821, 1562, 1621, 2608, 2903
BssECI CCNNGG 5 cut(s) 129, 1471, 1906, 2081, 2546
BssMI GATC 4 cut(s) 1243, 1778, 2352, 2368
BssNI GRCGYC 1 cut(s) 686
BssT1I CCWWGG 3 cut(s) 129, 1471, 2546
Bst2UI CCWGG 3 cut(s) 322, 2082, 2845
Bst6I CTCTTC 6 cut(s) 277, 1131, 1581, 1729, 2393, 2516
BstACI GRCGYC 1 cut(s) 686
BstAFI CTTAAG 2 cut(s) 1157, 2099
BstAPI GCANNNNNTGC 1 cut(s) 3035
BstAUI TGTACA 2 cut(s) 1533, 2324
BstBI TTCGAA 1 cut(s) 2627
BstC8I GCNNGC 8 cut(s) 42, 935, 1127, 1922, 2476, 2773, 2777, 3084
BstDEI CTNAG 8 cut(s) 1232, 1240, 1247, 1379, 1439, 1755, 2406, 2527
BstDSI CCRYGG 3 cut(s) 129, 1471, 1906
BstFNI CGCG 2 cut(s) 1079, 3098
BstH2I RGCGCY 1 cut(s) 2972
BstHHI GCGC 4 cut(s) 67, 596, 1081, 2971
BstKTI GATC 4 cut(s) 1246, 1781, 2355, 2371
BstMAI GTCTC 6 cut(s) 263, 693, 1199, 1292, 1583, 1758
BstMBI GATC 4 cut(s) 1243, 1778, 2352, 2368
BstNI CCWGG 3 cut(s) 322, 2082, 2845
BstNSI RCATGY 5 cut(s) 143, 644, 880, 1540, 2775
BstSCI CCNGG 3 cut(s) 320, 2080, 2843
BstSFI CTRYAG 7 cut(s) 192, 1856, 2719, 2758, 2786, 2920, 3027
BstSLI GKGCMC 2 cut(s) 151, 634
BstUI CGCG 2 cut(s) 1079, 3098
BstV2I GAAGAC 2 cut(s) 593, 2433
BstX2I RGATCY 2 cut(s) 1243, 1778
BstYI RGATCY 2 cut(s) 1243, 1778
BsuRI GGCC 2 cut(s) 1066, 2715
BtgI CCRYGG 3 cut(s) 129, 1471, 1906
BtgZI GCGATG 1 cut(s) 2911
BtsI GCAGTG 2 cut(s) 2999, 3024
BtsIMutI CAGTG 8 cut(s) 84, 611, 1462, 1834, 2414, 2493, 2999, 3024
BveI ACCTGC 1 cut(s) 703
Cac8I GCNNGC 8 cut(s) 42, 935, 1127, 1922, 2476, 2773, 2777, 3084
CaiI CAGNNNCTG 2 cut(s) 835, 3035
CciI TCATGA 1 cut(s) 456
CfoI GCGC 4 cut(s) 67, 596, 1081, 2971
Cfr13I GGNCC 4 cut(s) 1946, 2312, 2714, 2732
CseI GACGC 2 cut(s) 675, 1434
Csp6I GTAC 6 cut(s) 724, 1534, 2141, 2230, 2325, 2594
CspCI CAANNNNNGTGG 2 cut(s) 561, 596
CviQI GTAC 6 cut(s) 724, 1534, 2141, 2230, 2325, 2594
DdeI CTNAG 8 cut(s) 1232, 1240, 1247, 1379, 1439, 1755, 2406, 2527
DpnI GATC 4 cut(s) 1245, 1780, 2354, 2370
DpnII GATC 4 cut(s) 1243, 1778, 2352, 2368
DraI TTTAAA 2 cut(s) 19, 1191
EaeI YGGCCR 1 cut(s) 1064
Eam1104I CTCTTC 6 cut(s) 277, 1131, 1581, 1729, 2393, 2516
EarI CTCTTC 6 cut(s) 277, 1131, 1581, 1729, 2393, 2516
Eco130I CCWWGG 3 cut(s) 129, 1471, 2546
Eco32I GATATC 2 cut(s) 1506, 1714
Eco47I GGWCC 3 cut(s) 1946, 2312, 2732
Eco47III AGCGCT 1 cut(s) 2970
Eco57I CTGAAG 5 cut(s) 726, 857, 1035, 1155, 1946
Eco88I CYCGRG 1 cut(s) 1202
EcoO109I RGGNCCY 1 cut(s) 2714
EcoRI GAATTC 1 cut(s) 378
EcoRII CCWGG 3 cut(s) 320, 2080, 2843
EcoRV GATATC 2 cut(s) 1506, 1714
EcoT14I CCWWGG 3 cut(s) 129, 1471, 2546
EcoT22I ATGCAT 3 cut(s) 734, 975, 1542
ErhI CCWWGG 3 cut(s) 129, 1471, 2546
Esp3I CGTCTC 1 cut(s) 693
FalI AAGNNNNNCTT 2 cut(s) 523, 555
FaqI GGGAC 4 cut(s) 901, 1568, 1932, 3017
FauI CCCGC 4 cut(s) 1913, 2968, 2982, 3001
FauNDI CATATG 1 cut(s) 1652
FbaI TGATCA 1 cut(s) 2352
FblI GTMKAC 2 cut(s) 99, 166
FspBI CTAG 8 cut(s) 288, 585, 930, 1257, 1523, 2556, 2823, 2889
GlaI GCGC 4 cut(s) 66, 595, 1080, 2970
GsaI CCCAGC 1 cut(s) 387
HaeII RGCGCY 1 cut(s) 2972
HaeIII GGCC 2 cut(s) 1066, 2715
HapII CCGG 2 cut(s) 1814, 2335
HgaI GACGC 2 cut(s) 675, 1434
HhaI GCGC 4 cut(s) 67, 596, 1081, 2971
Hin1I GRCGYC 1 cut(s) 686
Hin6I GCGC 4 cut(s) 65, 594, 1079, 2969
HinP1I GCGC 4 cut(s) 65, 594, 1079, 2969
HincII GTYRAC 2 cut(s) 1025, 1614
HindII GTYRAC 2 cut(s) 1025, 1614
HindIII AAGCTT 3 cut(s) 924, 1305, 1367
HpaI GTTAAC 1 cut(s) 1614
HpaII CCGG 2 cut(s) 1814, 2335
HphI GGTGA 7 cut(s) 145, 418, 1846, 2081, 2574, 2933, 2974
Hpy166II GTNNAC 9 cut(s) 6, 100, 149, 167, 472, 724, 1025, 1614, 1705
Hpy188I TCNGA 8 cut(s) 496, 1015, 1355, 1758, 2264, 2398, 2874, 3053
Hpy8I GTNNAC 9 cut(s) 6, 100, 149, 167, 472, 724, 1025, 1614, 1705
HpyAV CCTTC 6 cut(s) 1571, 1868, 2228, 2595, 2735, 2824
HpyCH4IV ACGT 2 cut(s) 345, 2805
HpyF3I CTNAG 8 cut(s) 1232, 1240, 1247, 1379, 1439, 1755, 2406, 2527
HpySE526I ACGT 2 cut(s) 345, 2805
Hsp92I GRCGYC 1 cut(s) 686
HspAI GCGC 4 cut(s) 65, 594, 1079, 2969
Kpn2I TCCGGA 1 cut(s) 2334
Ksp22I TGATCA 1 cut(s) 2352
KspAI GTTAAC 1 cut(s) 1614
Kzo9I GATC 4 cut(s) 1243, 1778, 2352, 2368
LguI GCTCTTC 2 cut(s) 277, 2516
LmnI GCTCC 4 cut(s) 2323, 2875, 2935, 2976
MaeI CTAG 8 cut(s) 288, 585, 930, 1257, 1523, 2556, 2823, 2889
MaeII ACGT 2 cut(s) 345, 2805
MalI GATC 4 cut(s) 1245, 1780, 2354, 2370
MboI GATC 4 cut(s) 1243, 1778, 2352, 2368
MflI RGATCY 2 cut(s) 1243, 1778
MhlI GDGCHC 2 cut(s) 151, 634
MlsI TGGCCA 1 cut(s) 1066
MluNI TGGCCA 1 cut(s) 1066
MlyI GAGTC 6 cut(s) 659, 938, 1245, 2290, 2332, 2588
MmeI TCCRAC 5 cut(s) 97, 897, 1967, 2689, 3076
Mox20I TGGCCA 1 cut(s) 1066
Mph1103I ATGCAT 3 cut(s) 734, 975, 1542
MroI TCCGGA 1 cut(s) 2334
MroXI GAANNNNTTC 1 cut(s) 2852
MscI TGGCCA 1 cut(s) 1066
MslI CAYNNNNRTG 4 cut(s) 144, 1892, 2034, 2601
Msp20I TGGCCA 1 cut(s) 1066
MspCI CTTAAG 2 cut(s) 1157, 2099
MspI CCGG 2 cut(s) 1814, 2335
MspR9I CCNGG 3 cut(s) 322, 2082, 2845
Mva1269I GAATGC 4 cut(s) 67, 596, 734, 1449
MvaI CCWGG 3 cut(s) 322, 2082, 2845
MvnI CGCG 2 cut(s) 1079, 3098
NcoI CCATGG 2 cut(s) 129, 1471
NdeI CATATG 1 cut(s) 1652
NdeII GATC 4 cut(s) 1243, 1778, 2352, 2368
NlaIV GGNNCC 3 cut(s) 319, 1948, 2716
NmeAIII GCCGAG 1 cut(s) 647
NmuCI GTSAC 4 cut(s) 82, 520, 1834, 2580
NsiI ATGCAT 3 cut(s) 734, 975, 1542
NspI RCATGY 5 cut(s) 143, 644, 880, 1540, 2775
NspV TTCGAA 1 cut(s) 2627
PaeI GCATGC 1 cut(s) 2775
PagI TCATGA 1 cut(s) 456
PciI ACATGT 1 cut(s) 139
PciSI GCTCTTC 2 cut(s) 277, 2516
PctI GAATGC 4 cut(s) 67, 596, 734, 1449
PdmI GAANNNNTTC 1 cut(s) 2852
PfeI GAWTC 9 cut(s) 325, 503, 767, 869, 1375, 1786, 1990, 2252, 2864
PfoI TCCNGGA 1 cut(s) 2843
PleI GAGTC 6 cut(s) 659, 938, 1244, 2289, 2332, 2587
PpsI GAGTC 6 cut(s) 659, 938, 1244, 2289, 2332, 2587
PscI ACATGT 1 cut(s) 139
PshBI ATTAAT 1 cut(s) 2465
Psp6I CCWGG 3 cut(s) 320, 2080, 2843
PspFI CCCAGC 1 cut(s) 383
PspGI CCWGG 3 cut(s) 320, 2080, 2843
PspN4I GGNNCC 3 cut(s) 319, 1948, 2716
PspPI GGNCC 4 cut(s) 1946, 2312, 2714, 2732
PstI CTGCAG 5 cut(s) 2723, 2762, 2790, 2924, 3031
PstNI CAGNNNCTG 2 cut(s) 835, 3035
PsuI RGATCY 2 cut(s) 1243, 1778
RsaI GTAC 6 cut(s) 725, 1535, 2142, 2231, 2326, 2595
RsaNI GTAC 6 cut(s) 724, 1534, 2141, 2230, 2325, 2594
RseI CAYNNNNRTG 4 cut(s) 144, 1892, 2034, 2601
SapI GCTCTTC 2 cut(s) 277, 2516
Sau3AI GATC 4 cut(s) 1243, 1778, 2352, 2368
Sau96I GGNCC 4 cut(s) 1946, 2312, 2714, 2732
SchI GAGTC 6 cut(s) 659, 938, 1245, 2290, 2332, 2588
ScrFI CCNGG 3 cut(s) 322, 2082, 2845
SduI GDGCHC 2 cut(s) 151, 634
SfcI CTRYAG 7 cut(s) 192, 1856, 2719, 2758, 2786, 2920, 3027
SfuI TTCGAA 1 cut(s) 2627
SinI GGWCC 3 cut(s) 1946, 2312, 2732
SmiI ATTTAAAT 1 cut(s) 1191
SmiMI CAYNNNNRTG 4 cut(s) 144, 1892, 2034, 2601
SmlI CTYRAG 5 cut(s) 214, 1157, 1361, 1370, 2099
SmoI CTYRAG 5 cut(s) 214, 1157, 1361, 1370, 2099
SpeI ACTAGT 1 cut(s) 1256
SphI GCATGC 1 cut(s) 2775
SspI AATATT 3 cut(s) 1597, 1772, 2331
SspMI CTAG 8 cut(s) 288, 585, 930, 1257, 1523, 2556, 2823, 2889
StyD4I CCNGG 3 cut(s) 320, 2080, 2843
StyI CCWWGG 3 cut(s) 129, 1471, 2546
SwaI ATTTAAAT 1 cut(s) 1191
TaiI ACGT 2 cut(s) 348, 2808
TaqI TCGA 6 cut(s) 637, 1412, 1572, 2010, 2627, 2702
TatI WGTACW 3 cut(s) 1533, 2140, 2324
TauI GCSGC 4 cut(s) 1744, 1809, 2799, 2895
TfiI GAWTC 9 cut(s) 325, 503, 767, 869, 1375, 1786, 1990, 2252, 2864
TscAI CASTG 8 cut(s) 91, 618, 1462, 1834, 2414, 2493, 3006, 3031
TseFI GTSAC 4 cut(s) 82, 520, 1834, 2580
Tsp45I GTSAC 4 cut(s) 82, 520, 1834, 2580
TspGWI ACGGA 2 cut(s) 117, 2179
TspRI CASTG 8 cut(s) 91, 618, 1462, 1834, 2414, 2493, 3006, 3031
Vha464I CTTAAG 2 cut(s) 1157, 2099
VneI GTGCAC 1 cut(s) 147
VpaK11BI GGWCC 3 cut(s) 1946, 2312, 2732
VspI ATTAAT 1 cut(s) 2465
XapI RAATTY 5 cut(s) 222, 362, 378, 2258, 2875
XceI RCATGY 5 cut(s) 143, 644, 880, 1540, 2775
XmiI GTMKAC 2 cut(s) 99, 166
XmnI GAANNNNTTC 1 cut(s) 2852
XspI CTAG 8 cut(s) 288, 585, 930, 1257, 1523, 2556, 2823, 2889
Zsp2I ATGCAT 3 cut(s) 734, 975, 1542
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.