Rroxscaffold_1G00019400

Disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000085
Physical Location & Seq
Forward (+)
23715694 .. 23719031
3338 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00019400.1

Sequence Viewer

Length: 1383 bp
ATGAAATGGAGGGACGCCTTGAACAAAATCAGCAGCATCTTTGGCTGGGTATGTGGGAGTTCTGAGCCAGAAGGACACGTTGTCCAACAAATCGTGGAATTTGTCTGCAGCAAACCTATTGAAATTGAGTCGACGGAAGATATTGAAACAAAACAAGCAATGAAGGGAACTTCTCCTCGTTGGAAGTATGATGTGTTTATAAATTTCAGGGGTGAGGACACTTGTAAGGGTTTTCTGTCCTATTTGCTAGCTGAATTGCAAAAGAAACCAGCACACCTGAACACAGTAAAGAATGATGAACCACTTCCAAAAGGGCGGAATATATCTTCGTATCTCCTAAACGCCATAGAAGAGGTGAGGTTTGCCATTGTTGTTCTTTCGCAAGACTTTGCTTATTCATCATGGTGCCTAGAGGAACTAGCAAAGATTTTTGAATGCATGGAAAACCGAAATAGAATTCTGCCAATCTTTTATCATGTGGATCCCTCTGAGGTGCGACATCAAAGGGGGAGTTTTGGAGATGCCTTCGCTGTACATGAAGAAAGATTTCGGGATAATCATGAGAAGGTCAGGCGGTGGAGACGTGTTTTATCAATGGTAGCCAACATCCCTGGATGGACTTCAGAAAAATATGAGTATGAAGGAGAACTTATCAAAGACGTTGTGCAAGCTATGTGCAGTAGACTAGTTCAGTCTACAGAGTCGACGGAAGATTTTGAAGCAACAGGAGATGTCATGGACCAAACTTCTCCCCAGCCTGACCCAGCCCATTCAGACCATGAATTGCCAATCATGTCTCCGCCTTCATCAGCTGAACGAGATCCTCCTCCGAAGTATGATGTGTTTTTGAGTTTCATGGGGGAAGACACTCGTAAGGGTTTTATAGCCCATTTATACCGTGAATTGCAAAACACCAGAGTGATTAAAACTTTCAAGGATGACGTGCAACTAGAAAAAGGGACGGTCATTGCTTCAAATCTCCTAACGGCAATCGAAGAATCAAGATTTGCGATCATTGTGTTGTCAAAAAATTATGCTTCTTCTTCATGGTGTTTGGATGAACTTGCAAAGATTTTCCAATGCATGAAAGATAGGAACACAATTTTCCCAATTTTTTATGAGGTGGAACCCACTGATGTACGCCATCAAAAGACAGAGACGAGGTTTGGAAAAGCTTTCATTAAGCAGCACGAAACTCATGGACAAGACAACGAGAAGATGAAGCAATGGAGTGCTGCTTTAGAAGGAGTGGCTGGAATCGCTGGGTTCCCGTCAACTAAGTATCAGACGGACATAGAACTAATCGAAGACGTTGTGAAACATTTGTTGAGCAAAGTACTTCAAGAGTCAAAATATGAAATGGAAAGGAAGAGATATTTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC TIR

Protein Analysis

460

Amino Acids

53.11

Weight (kDa)

5.59

Isoelectric Point (pI)

56.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 62 - 240 1.2e-46 TIR domain
TIR_2 PF13676 65 - 162 3.1e-09 TIR domain
TIR PF01582 278 - 452 6.9e-47 TIR domain
TIR_2 PF13676 281 - 377 8.8e-14 TIR domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000085)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g05721 FvH4_2g05721 FvH4_3g35820 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35920 FvH4_3g38670 FvH4_3g43650 FvH4_3g43650 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44070 FvH4_5g01271 FvH4_5g02970 FvH4_5g02970 FvH4_5g02970 FvH4_5g27640 FvH4_5g27640 FvH4_5g27640 FvH4_6g05393 FvH4_6g52372 FvH4_7g06680 FvH4_7g12671 FvH4_7g13640 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31510
malus_domestica MD09G1227900.v1.1 MD11G1019800.v1.1 MD11G1020500.v1.1
prunus_persica Prupe.1G542800_v2.0.a1 Prupe.1G542800_v2.0.a1
pyrus_communis pycom11g01460 pycom11g01490 pycom11g01530 pycom11g01570 pycom15g35490
rosa_chinensis RchiOBHm_Chr1g0353711 RchiOBHm_Chr3g0473211 RchiOBHm_Chr3g0473291 RchiOBHm_Chr3g0473341 RchiOBHm_Chr3g0473381 RchiOBHm_Chr3g0473391 RchiOBHm_Chr3g0473441 RchiOBHm_Chr3g0473481 RchiOBHm_Chr3g0473531 RchiOBHm_Chr3g0473561 RchiOBHm_Chr3g0473571 RchiOBHm_Chr3g0483491 RchiOBHm_Chr3g0488681 RchiOBHm_Chr5g0059311 RchiOBHm_Chr5g0061291 RchiOBHm_Chr5g0061301 RchiOBHm_Chr5g0061331 RchiOBHm_Chr5g0064081 RchiOBHm_Chr5g0064111 RchiOBHm_Chr5g0064151 RchiOBHm_Chr5g0064171 RchiOBHm_Chr5g0069721 RchiOBHm_Chr5g0069731 RchiOBHm_Chr5g0069741 RchiOBHm_Chr5g0078251 RchiOBHm_Chr5g0078301 RchiOBHm_Chr5g0079511 RchiOBHm_Chr5g0079791 RchiOBHm_Chr5g0079811 RchiOBHm_Chr5g0079861 RchiOBHm_Chr5g0079881 RchiOBHm_Chr5g0080241 RchiOBHm_Chr5g0080281 RchiOBHm_Chr5g0080371 RchiOBHm_Chr5g0080671 RchiOBHm_Chr6g0256601 RchiOBHm_Chr6g0274791 RchiOBHm_Chr7g0221971 RchiOBHm_Chr7g0221981
rosa_laevigata RLG00000002106 RLG00000013523 RLG00000014806 RLG00000024010 RLG00000035451 RLG00000035455 RLG00000035464 RLG00000035705 RLG00000036094 RLG00000036817 RLG00000036825 RLG00000036826 RLG00000036848
rosa_multiflora Rmu_co8200400.1_g000001 Rmu_co8473147.1_g000001 Rmu_sc0000394.1_g000030 Rmu_sc0000555.1_g000030 Rmu_sc0000595.1_g000002 Rmu_sc0000595.1_g000006 Rmu_sc0000595.1_g000029 Rmu_sc0000689.1_g000018 Rmu_sc0000689.1_g000032 Rmu_sc0000689.1_g000041 Rmu_sc0000738.1_g000025 Rmu_sc0000826.1_g000016 Rmu_sc0000908.1_g000016 Rmu_sc0000908.1_g000019 Rmu_sc0000908.1_g000021 Rmu_sc0001208.1_g000087 Rmu_sc0001639.1_g000004 Rmu_sc0002075.1_g000004 Rmu_sc0002075.1_g000009 Rmu_sc0002187.1_g000042 Rmu_sc0002187.1_g000043 Rmu_sc0002187.1_g000060 Rmu_sc0002513.1_g000025 Rmu_sc0002983.1_g000008 Rmu_sc0003012.1_g000004 Rmu_sc0003069.1_g000019 Rmu_sc0003069.1_g000020 Rmu_sc0003069.1_g000047 Rmu_sc0003069.1_g000051 Rmu_sc0003069.1_g000053 Rmu_sc0003131.1_g000014 Rmu_sc0003514.1_g000003 Rmu_sc0003547.1_g000006 Rmu_sc0003547.1_g000008 Rmu_sc0004325.1_g000021 Rmu_sc0004482.1_g000004 Rmu_sc0004482.1_g000022 Rmu_sc0005006.1_g000004 Rmu_sc0005006.1_g000009 Rmu_sc0005006.1_g000010 Rmu_sc0005194.1_g000002 Rmu_sc0005194.1_g000003 Rmu_sc0005834.1_g000002 Rmu_sc0005947.1_g000023 Rmu_sc0006792.1_g000026 Rmu_sc0007612.1_g000001 Rmu_sc0007793.1_g000024 Rmu_sc0007793.1_g000025 Rmu_sc0008050.1_g000015 Rmu_sc0008336.1_g000003 Rmu_sc0010248.1_g000002 Rmu_sc0011921.1_g000001 Rmu_sc0011921.1_g000006 Rmu_sc0012138.1_g000001 Rmu_sc0016164.1_g000015 Rmu_sc0018807.1_g000005 Rmu_sc0030948.1_g000001 Rmu_sc0042587.1_g000001 Rmu_ssc0000170.1_g000020 Rmu_ssc0000170.1_g000026 Rmu_ssc0000170.1_g000029
rosa_roxburghii Rroxscaffold_1G00003040 Rroxscaffold_1G00003080 Rroxscaffold_1G00003430 Rroxscaffold_1G00003490 Rroxscaffold_1G00011370 Rroxscaffold_1G00016780 Rroxscaffold_1G00019390 Rroxscaffold_1G00019400 Rroxscaffold_1G00019420 Rroxscaffold_1G00021170 Rroxscaffold_3G00237530 Rroxscaffold_3G00246470 Rroxscaffold_4G00301730 Rroxscaffold_4G00309300 Rroxscaffold_6G00398250 Rroxscaffold_6G00398270 Rroxscaffold_6G00398280 Rroxscaffold_6G00408070 Rroxscaffold_7G00193940 Rroxscaffold_7G00209570
rosa_rugosa Rorug01G0237100 Rorug03G0098200 Rorug03G0132200 Rorug03G0132400 Rorug03G0132500 Rorug03G0132500 Rorug03G0132500 Rorug03G0132700 Rorug03G0132800 Rorug03G0205900 Rorug03G0206100 Rorug03G0206100 Rorug03G0206300 Rorug03G0206400 Rorug03G0206400 Rorug03G0240700 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug05G0322400 Rorug05G0339300 Rorug05G0339500 Rorug05G0362200 Rorug05G0362300 Rorug05G0362400 Rorug05G0362600 Rorug05G0362700 Rorug05G0362800 Rorug05G0363100 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0459900 Rorug05G0464600 Rorug05G0465000 Rorug05G0465100 Rorug05G0465200 Rorug05G0466000 Rorug05G0466300 Rorug05G0466400 Rorug05G0466500 Rorug05G0466600 Rorug05G0466700 Rorug05G0466700 Rorug05G0466700 Rorug05G0466800 Rorug05G0466900 Rorug05G0468100 Rorug05G0562200 Rorug05G0562300 Rorug06G0084400 Rorug06G0084500 Rorug06G0084500 Rorug06G0084600 Rorug07G0136400 Rorug07G0204500 Rorug07G0204600 Rorug07G0221500
rosa_samantha Rh5CG438200 Rh5CG569900 Rh6AG080700 Rh7CG362800 Rh7DG275900 Rh7DG343100
rosa_wichuraiana Rw0G004790 Rw0G008160 Rw0G008170 Rw0G008200 Rw0G008210 Rw0G012980 Rw0G013670 Rw0G019920 Rw0G020380 Rw0G022790 Rw0G022800 Rw0G023350 Rw1G005530 Rw1G021740 Rw3G013910 Rw3G015980 Rw3G023020 Rw3G023030 Rw3G025580 Rw5G027180 Rw5G037760 Rw5G037770 Rw5G037780 Rw5G037790 Rw5G037810 Rw5G037820 Rw5G039500 Rw5G039520 Rw5G039530 Rw5G039540 Rw5G039550 Rw5G039570 Rw5G039580 Rw5G039610 Rw5G039630 Rw5G039660 Rw5G042590 Rw5G047840 Rw5G048170 Rw5G048400 Rw5G048470 Rw5G048540 Rw6G007030 Rw6G007080 Rw6G007460 Rw6G017430 Rw7G023150 Rw7G023260 Rw7G029260 Rw7G029270 Rw7G030950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 200
AccB1I GGYRCC 1 cut(s) 405
AccI GTMKAC 4 cut(s) 131, 682, 695, 704
AciI CCGC 3 cut(s) 316, 574, 800
AclWI GGATC 3 cut(s) 476, 489, 815
AcsI RAATTY 3 cut(s) 98, 202, 456
AcuI CTGAAG 1 cut(s) 606
AcyI GRCGYC 1 cut(s) 15
AfaI GTAC 3 cut(s) 534, 1140, 1338
AflIII ACRYGT 2 cut(s) 76, 583
AgsI TTSAA 8 cut(s) 22, 122, 146, 434, 719, 934, 975, 1343
AhdI GACNNNNNGTC 1 cut(s) 80
AhlI ACTAGT 1 cut(s) 685
AjiI CACGTC 2 cut(s) 584, 943
AjnI CCWGG 1 cut(s) 610
AleI CACNNNNGTG 1 cut(s) 917
AluBI AGCT 4 cut(s) 251, 671, 812, 1175
AluI AGCT 4 cut(s) 251, 671, 812, 1175
Alw26I GTCTC 3 cut(s) 574, 801, 1151
AlwI GGATC 3 cut(s) 476, 489, 815
ApeKI GCWGC 4 cut(s) 33, 108, 1186, 1235
ApoI RAATTY 3 cut(s) 98, 202, 456
Asp700I GAANNNNTTC 2 cut(s) 303, 546
AspS9I GGNCC 1 cut(s) 739
AsuHPI GGTGA 2 cut(s) 224, 367
AsuNHI GCTAGC 1 cut(s) 247
AvaII GGWCC 1 cut(s) 739
BamHI GGATCC 1 cut(s) 481
BanI GGYRCC 1 cut(s) 405
BbsI GAAGAC 2 cut(s) 870, 1314
BbvI GCAGC 4 cut(s) 45, 120, 1198, 1222
BccI CCATC 2 cut(s) 609, 1152
BceAI ACGGC 1 cut(s) 1002
BciT130I CCWGG 1 cut(s) 612
BcoDI GTCTC 3 cut(s) 574, 801, 1151
BcuI ACTAGT 1 cut(s) 685
BfaI CTAG 5 cut(s) 248, 410, 419, 686, 950
BfmI CTRYAG 2 cut(s) 106, 696
BisI GCNGC 4 cut(s) 34, 109, 1187, 1236
BlsI GCNGC 4 cut(s) 35, 110, 1188, 1237
BmcAI AGTACT 1 cut(s) 1338
Bme1390I CCNGG 1 cut(s) 612
Bme18I GGWCC 1 cut(s) 739
BmeRI GACNNNNNGTC 1 cut(s) 80
BmgBI CACGTC 2 cut(s) 584, 943
BmgT120I GGNCC 1 cut(s) 739
BmiI GGNNCC 4 cut(s) 407, 483, 1128, 1268
BmrFI CCNGG 1 cut(s) 612
BmsI GCATC 2 cut(s) 45, 511
BmtI GCTAGC 1 cut(s) 251
BpiI GAAGAC 2 cut(s) 870, 1314
BsaHI GRCGYC 1 cut(s) 15
BsaJI CCNNGG 1 cut(s) 610
Bse3DI GCAATG 3 cut(s) 165, 966, 1232
BseBI CCWGG 1 cut(s) 612
BseDI CCNNGG 1 cut(s) 610
BseGI GGATG 4 cut(s) 606, 620, 943, 1063
BseMI GCAATG 3 cut(s) 165, 966, 1232
BseMII CTCAG 2 cut(s) 54, 480
BseRI GAGGAG 2 cut(s) 165, 816
BseXI GCAGC 4 cut(s) 45, 120, 1198, 1222
BseYI CCCAGC 4 cut(s) 45, 753, 763, 1262
BsgI GTGCAG 1 cut(s) 697
BshNI GGYRCC 1 cut(s) 405
BslFI GGGAC 2 cut(s) 26, 973
BsmAI GTCTC 3 cut(s) 574, 801, 1151
BsmBI CGTCTC 2 cut(s) 574, 1151
BsmFI GGGAC 2 cut(s) 26, 973
BsmI GAATGC 1 cut(s) 440
Bsp1407I TGTACA 1 cut(s) 532
Bsp143I GATC 3 cut(s) 481, 820, 1011
BspACI CCGC 3 cut(s) 316, 574, 800
BspCNI CTCAG 2 cut(s) 55, 481
BspHI TCATGA 1 cut(s) 559
BspLI GGNNCC 4 cut(s) 407, 483, 1128, 1268
BspMAI CTGCAG 1 cut(s) 110
BspOI GCTAGC 1 cut(s) 251
BspPI GGATC 3 cut(s) 476, 489, 815
BspT107I GGYRCC 1 cut(s) 405
BsrDI GCAATG 3 cut(s) 165, 966, 1232
BsrGI TGTACA 1 cut(s) 532
BssECI CCNNGG 1 cut(s) 610
BssMI GATC 3 cut(s) 481, 820, 1011
BssNI GRCGYC 1 cut(s) 15
Bst2UI CCWGG 1 cut(s) 612
Bst4CI ACNGT 3 cut(s) 286, 899, 964
Bst6I CTCTTC 2 cut(s) 345, 1364
BstACI GRCGYC 1 cut(s) 15
BstAUI TGTACA 1 cut(s) 532
BstC8I GCNNGC 2 cut(s) 249, 669
BstDEI CTNAG 3 cut(s) 63, 489, 1278
BstF5I GGATG 4 cut(s) 606, 620, 943, 1063
BstKTI GATC 3 cut(s) 484, 823, 1014
BstMAI GTCTC 3 cut(s) 574, 801, 1151
BstMBI GATC 3 cut(s) 481, 820, 1011
BstMWI GCNNNNNNNGC 2 cut(s) 42, 1259
BstNI CCWGG 1 cut(s) 612
BstSCI CCNGG 1 cut(s) 610
BstSFI CTRYAG 2 cut(s) 106, 696
BstV1I GCAGC 4 cut(s) 45, 120, 1198, 1222
BstV2I GAAGAC 2 cut(s) 870, 1314
BstX2I RGATCY 2 cut(s) 481, 820
BstYI RGATCY 2 cut(s) 481, 820
BtrI CACGTC 2 cut(s) 584, 943
BtsCI GGATG 4 cut(s) 606, 620, 943, 1063
BtsIMutI CAGTG 1 cut(s) 1131
Cac8I GCNNGC 2 cut(s) 249, 669
CciI TCATGA 1 cut(s) 559
Cfr13I GGNCC 1 cut(s) 739
CseI GACGC 1 cut(s) 23
Csp6I GTAC 3 cut(s) 533, 1139, 1337
CviQI GTAC 3 cut(s) 533, 1139, 1337
DdeI CTNAG 3 cut(s) 63, 489, 1278
DpnI GATC 3 cut(s) 483, 822, 1013
DpnII GATC 3 cut(s) 481, 820, 1011
DriI GACNNNNNGTC 1 cut(s) 80
Eam1104I CTCTTC 2 cut(s) 345, 1364
Eam1105I GACNNNNNGTC 1 cut(s) 80
EarI CTCTTC 2 cut(s) 345, 1364
EciI GGCGGA 2 cut(s) 331, 789
Eco47I GGWCC 1 cut(s) 739
Eco57I CTGAAG 1 cut(s) 606
EcoRI GAATTC 1 cut(s) 456
EcoRII CCWGG 1 cut(s) 610
EcoT22I ATGCAT 2 cut(s) 440, 1085
Esp3I CGTCTC 2 cut(s) 574, 1151
FalI AAGNNNNNCTT 2 cut(s) 633, 665
FaqI GGGAC 2 cut(s) 26, 973
FblI GTMKAC 4 cut(s) 131, 682, 695, 704
Fnu4HI GCNGC 4 cut(s) 34, 109, 1187, 1236
FokI GGATG 4 cut(s) 593, 627, 950, 1070
Fsp4HI GCNGC 4 cut(s) 34, 109, 1187, 1236
FspBI CTAG 5 cut(s) 248, 410, 419, 686, 950
GluI GCNGC 4 cut(s) 34, 109, 1187, 1236
GsaI CCCAGC 4 cut(s) 49, 757, 767, 1266
HgaI GACGC 1 cut(s) 23
Hin1I GRCGYC 1 cut(s) 15
HincII GTYRAC 3 cut(s) 132, 705, 1275
HindII GTYRAC 3 cut(s) 132, 705, 1275
HindIII AAGCTT 1 cut(s) 1173
HinfI GANTC 5 cut(s) 128, 701, 998, 1257, 1346
HphI GGTGA 2 cut(s) 224, 367
Hpy166II GTNNAC 5 cut(s) 132, 683, 696, 705, 1275
Hpy188I TCNGA 6 cut(s) 64, 490, 625, 775, 831, 1287
Hpy188III TCNNGA 4 cut(s) 551, 560, 1002, 1343
Hpy8I GTNNAC 5 cut(s) 132, 683, 696, 705, 1275
Hpy99I CGWCG 2 cut(s) 136, 709
HpyAV CCTTC 7 cut(s) 65, 157, 535, 559, 635, 813, 1238
HpyCH4III ACNGT 3 cut(s) 286, 899, 964
HpyCH4IV ACGT 5 cut(s) 78, 583, 660, 942, 1311
HpyCH4V TGCA 9 cut(s) 108, 259, 438, 667, 678, 907, 946, 1067, 1083
HpyF10VI GCNNNNNNNGC 2 cut(s) 42, 1259
HpyF3I CTNAG 3 cut(s) 63, 489, 1278
HpySE526I ACGT 5 cut(s) 78, 583, 660, 942, 1311
Hsp92I GRCGYC 1 cut(s) 15
Kzo9I GATC 3 cut(s) 481, 820, 1011
Lsp1109I GCAGC 4 cut(s) 45, 120, 1198, 1222
LweI GCATC 2 cut(s) 45, 511
MaeI CTAG 5 cut(s) 248, 410, 419, 686, 950
MaeII ACGT 5 cut(s) 78, 583, 660, 942, 1311
MalI GATC 3 cut(s) 483, 822, 1013
MboI GATC 3 cut(s) 481, 820, 1011
MflI RGATCY 2 cut(s) 481, 820
MlyI GAGTC 3 cut(s) 137, 710, 1355
MmeI TCCRAC 2 cut(s) 109, 161
Mph1103I ATGCAT 2 cut(s) 440, 1085
MroXI GAANNNNTTC 2 cut(s) 303, 546
MseI TTAA 2 cut(s) 924, 1182
MslI CAYNNNNRTG 2 cut(s) 403, 917
MspA1I CMGCKG 1 cut(s) 812
MspR9I CCNGG 1 cut(s) 612
Mva1269I GAATGC 1 cut(s) 440
MvaI CCWGG 1 cut(s) 612
MwoI GCNNNNNNNGC 2 cut(s) 42, 1259
NdeII GATC 3 cut(s) 481, 820, 1011
NheI GCTAGC 1 cut(s) 247
NlaIV GGNNCC 4 cut(s) 407, 483, 1128, 1268
NsiI ATGCAT 2 cut(s) 440, 1085
OliI CACNNNNGTG 1 cut(s) 917
PagI TCATGA 1 cut(s) 559
PctI GAATGC 1 cut(s) 440
PdmI GAANNNNTTC 2 cut(s) 303, 546
PfeI GAWTC 2 cut(s) 998, 1257
PkrI GCNGC 4 cut(s) 35, 110, 1188, 1237
PleI GAGTC 3 cut(s) 136, 709, 1354
PpsI GAGTC 3 cut(s) 136, 709, 1354
PsiI TTATAA 1 cut(s) 200
Psp6I CCWGG 1 cut(s) 610
PspFI CCCAGC 4 cut(s) 45, 753, 763, 1262
PspGI CCWGG 1 cut(s) 610
PspN4I GGNNCC 4 cut(s) 407, 483, 1128, 1268
PspPI GGNCC 1 cut(s) 739
PstI CTGCAG 1 cut(s) 110
PsuI RGATCY 2 cut(s) 481, 820
PvuII CAGCTG 1 cut(s) 812
RsaI GTAC 3 cut(s) 534, 1140, 1338
RsaNI GTAC 3 cut(s) 533, 1139, 1337
RseI CAYNNNNRTG 2 cut(s) 403, 917
SalI GTCGAC 2 cut(s) 130, 703
SaqAI TTAA 2 cut(s) 924, 1182
SatI GCNGC 4 cut(s) 34, 109, 1187, 1236
Sau3AI GATC 3 cut(s) 481, 820, 1011
Sau96I GGNCC 1 cut(s) 739
ScaI AGTACT 1 cut(s) 1338
SchI GAGTC 3 cut(s) 137, 710, 1355
ScrFI CCNGG 1 cut(s) 612
SfaNI GCATC 2 cut(s) 45, 511
SfcI CTRYAG 2 cut(s) 106, 696
SinI GGWCC 1 cut(s) 739
SmiMI CAYNNNNRTG 2 cut(s) 403, 917
SpeI ACTAGT 1 cut(s) 685
SsiI CCGC 3 cut(s) 316, 574, 800
SspMI CTAG 5 cut(s) 248, 410, 419, 686, 950
StyD4I CCNGG 1 cut(s) 610
TaaI ACNGT 3 cut(s) 286, 899, 964
TaiI ACGT 5 cut(s) 81, 586, 663, 945, 1314
TaqI TCGA 4 cut(s) 131, 704, 993, 1305
TatI WGTACW 2 cut(s) 532, 1336
TfiI GAWTC 2 cut(s) 998, 1257
Tru1I TTAA 2 cut(s) 924, 1182
Tru9I TTAA 2 cut(s) 924, 1182
TscAI CASTG 1 cut(s) 1138
TseI GCWGC 4 cut(s) 33, 108, 1186, 1235
TspGWI ACGGA 3 cut(s) 149, 722, 1304
TspRI CASTG 1 cut(s) 1138
VpaK11BI GGWCC 1 cut(s) 739
XapI RAATTY 3 cut(s) 98, 202, 456
XmiI GTMKAC 4 cut(s) 131, 682, 695, 704
XmnI GAANNNNTTC 2 cut(s) 303, 546
XspI CTAG 5 cut(s) 248, 410, 419, 686, 950
ZrmI AGTACT 1 cut(s) 1338
Zsp2I ATGCAT 2 cut(s) 440, 1085
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.