RchiOBHm_Chr6g0274791

Disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0000085
Physical Location & Seq
Forward (+)
36365898 .. 36367269
1372 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ24653

Sequence Viewer

Length: 1296 bp
ATGAATGCGCTAAAAGATGATGAGGCCACTACCATTGGAGTCTACGGAATGGGGGGTGTTGGAAAGACAACAATGGTGAAATATGTTGGAGAACAAGCCCAAAAAAGTAGGCTTTTTAATCAAGTGATTATGGCTGTCGTATCCCAAAACCCTGACTTGATGAAAATTCAAGAGACATTTGCAGAACTGCTAGGCTTTAAATTGGAGGAGAAGACAGAAATTGGAAGAGCCATTAAATTGAAGGAGAAGATAATGAGAGGAACCGGGATCCTCATAATCTTGGATGACATTTGGAAGAGAATAGACTCTTCAAGCATAGGAATTCCGAGCCACAAAGAACTCCAAAGATGCAATTCCAAAGTTCTACTGACCACCAGAAAATTGAGTGTTTGCCGTTCCATGGATTGCCATCCAAACATACATCTCAATATCTTATCAGAAGAAGATTCTTGGAGCTTATTTGTGAAGGAAGCAAGGAAGTCTTTTGACAAATCATCCAATCTCTATGATGTAGCACGTAAGGTGGCTAGAGAATGCGCTGGTCTACCGATTGCTTTGATAGCAGTTGCGAGGGCCCTTCAAGAGGAAGATTTGGACGGATGGAAAGAAGCTGCTCGACGACTTAAAGAGTCTCAACCTCCCATCCTTGAAGATGAGGGAGATGTGTTCAAATGCATAAAGTTAAGCTATGATTACTTGAAATCTGATGATTCCAAATCATGCTTCTTGCTTTGCTGCCTGTTCCCCGAAGATTATGATATCCCAATTGAATACTTGTTCAAGTATGGATTTGGGAAAGGAATGTTTCAAGATTCAAACTTGCTAGAAGCCCGAGCCACAACATATTTAGTGGTGAAGGCCCTTAAAGATTCTAGCTTGCTTTTGGACGCTAGAGATGACAGATATGTAAGGATGCATGATGTCATTCGGGATATGGCAATCTTAATTTCATTATCTGAAGGCCAGCGGTTCTTGGTGAAAGCTGGCTGTGAATTGAAGAATTGGCCACAGATTGATGCACATAAAGGCTACTATGGAATCTCACTAATGGAGAACAAGATTTGCAAGCTGCCCCAAGAGTTGGTATGTCCAAATCTCCATATTTTATTACTGCAACACAATGCTTCTCTAAATGAGATCCCAAAATCTTTTCTCCAAAGTCAGAATGAATTAAGAGTCTTGGATCTTAGCGACACTGGTATTTCATTACTACCCCAATCAATCAGTTTCTTAACCAACCTTCAAGCTTTGTATTTAGATTACTGTTGGAACATAATTGACATTTCTGAAAGTTGA

Protein Analysis

431

Amino Acids

48.88

Weight (kDa)

5.79

Isoelectric Point (pI)

47.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 4 - 159 1e-28 NB-ARC domain
LRR_8 PF13855 364 - 422 2.5e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000085)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g05721 FvH4_2g05721 FvH4_3g35820 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35920 FvH4_3g38670 FvH4_3g43650 FvH4_3g43650 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44070 FvH4_5g01271 FvH4_5g02970 FvH4_5g02970 FvH4_5g02970 FvH4_5g27640 FvH4_5g27640 FvH4_5g27640 FvH4_6g05393 FvH4_6g52372 FvH4_7g06680 FvH4_7g12671 FvH4_7g13640 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31510
malus_domestica MD09G1227900.v1.1 MD11G1019800.v1.1 MD11G1020500.v1.1
prunus_persica Prupe.1G542800_v2.0.a1 Prupe.1G542800_v2.0.a1
pyrus_communis pycom11g01460 pycom11g01490 pycom11g01530 pycom11g01570 pycom15g35490
rosa_chinensis RchiOBHm_Chr1g0353711 RchiOBHm_Chr3g0473211 RchiOBHm_Chr3g0473291 RchiOBHm_Chr3g0473341 RchiOBHm_Chr3g0473381 RchiOBHm_Chr3g0473391 RchiOBHm_Chr3g0473441 RchiOBHm_Chr3g0473481 RchiOBHm_Chr3g0473531 RchiOBHm_Chr3g0473561 RchiOBHm_Chr3g0473571 RchiOBHm_Chr3g0483491 RchiOBHm_Chr3g0488681 RchiOBHm_Chr5g0059311 RchiOBHm_Chr5g0061291 RchiOBHm_Chr5g0061301 RchiOBHm_Chr5g0061331 RchiOBHm_Chr5g0064081 RchiOBHm_Chr5g0064111 RchiOBHm_Chr5g0064151 RchiOBHm_Chr5g0064171 RchiOBHm_Chr5g0069721 RchiOBHm_Chr5g0069731 RchiOBHm_Chr5g0069741 RchiOBHm_Chr5g0078251 RchiOBHm_Chr5g0078301 RchiOBHm_Chr5g0079511 RchiOBHm_Chr5g0079791 RchiOBHm_Chr5g0079811 RchiOBHm_Chr5g0079861 RchiOBHm_Chr5g0079881 RchiOBHm_Chr5g0080241 RchiOBHm_Chr5g0080281 RchiOBHm_Chr5g0080371 RchiOBHm_Chr5g0080671 RchiOBHm_Chr6g0256601 RchiOBHm_Chr6g0274791 RchiOBHm_Chr7g0221971 RchiOBHm_Chr7g0221981
rosa_laevigata RLG00000002106 RLG00000013523 RLG00000014806 RLG00000024010 RLG00000035451 RLG00000035455 RLG00000035464 RLG00000035705 RLG00000036094 RLG00000036817 RLG00000036825 RLG00000036826 RLG00000036848
rosa_multiflora Rmu_co8200400.1_g000001 Rmu_co8473147.1_g000001 Rmu_sc0000394.1_g000030 Rmu_sc0000555.1_g000030 Rmu_sc0000595.1_g000002 Rmu_sc0000595.1_g000006 Rmu_sc0000595.1_g000029 Rmu_sc0000689.1_g000018 Rmu_sc0000689.1_g000032 Rmu_sc0000689.1_g000041 Rmu_sc0000738.1_g000025 Rmu_sc0000826.1_g000016 Rmu_sc0000908.1_g000016 Rmu_sc0000908.1_g000019 Rmu_sc0000908.1_g000021 Rmu_sc0001208.1_g000087 Rmu_sc0001639.1_g000004 Rmu_sc0002075.1_g000004 Rmu_sc0002075.1_g000009 Rmu_sc0002187.1_g000042 Rmu_sc0002187.1_g000043 Rmu_sc0002187.1_g000060 Rmu_sc0002513.1_g000025 Rmu_sc0002983.1_g000008 Rmu_sc0003012.1_g000004 Rmu_sc0003069.1_g000019 Rmu_sc0003069.1_g000020 Rmu_sc0003069.1_g000047 Rmu_sc0003069.1_g000051 Rmu_sc0003069.1_g000053 Rmu_sc0003131.1_g000014 Rmu_sc0003514.1_g000003 Rmu_sc0003547.1_g000006 Rmu_sc0003547.1_g000008 Rmu_sc0004325.1_g000021 Rmu_sc0004482.1_g000004 Rmu_sc0004482.1_g000022 Rmu_sc0005006.1_g000004 Rmu_sc0005006.1_g000009 Rmu_sc0005006.1_g000010 Rmu_sc0005194.1_g000002 Rmu_sc0005194.1_g000003 Rmu_sc0005834.1_g000002 Rmu_sc0005947.1_g000023 Rmu_sc0006792.1_g000026 Rmu_sc0007612.1_g000001 Rmu_sc0007793.1_g000024 Rmu_sc0007793.1_g000025 Rmu_sc0008050.1_g000015 Rmu_sc0008336.1_g000003 Rmu_sc0010248.1_g000002 Rmu_sc0011921.1_g000001 Rmu_sc0011921.1_g000006 Rmu_sc0012138.1_g000001 Rmu_sc0016164.1_g000015 Rmu_sc0018807.1_g000005 Rmu_sc0030948.1_g000001 Rmu_sc0042587.1_g000001 Rmu_ssc0000170.1_g000020 Rmu_ssc0000170.1_g000026 Rmu_ssc0000170.1_g000029
rosa_roxburghii Rroxscaffold_1G00003040 Rroxscaffold_1G00003080 Rroxscaffold_1G00003430 Rroxscaffold_1G00003490 Rroxscaffold_1G00011370 Rroxscaffold_1G00016780 Rroxscaffold_1G00019390 Rroxscaffold_1G00019400 Rroxscaffold_1G00019420 Rroxscaffold_1G00021170 Rroxscaffold_3G00237530 Rroxscaffold_3G00246470 Rroxscaffold_4G00301730 Rroxscaffold_4G00309300 Rroxscaffold_6G00398250 Rroxscaffold_6G00398270 Rroxscaffold_6G00398280 Rroxscaffold_6G00408070 Rroxscaffold_7G00193940 Rroxscaffold_7G00209570
rosa_rugosa Rorug01G0237100 Rorug03G0098200 Rorug03G0132200 Rorug03G0132400 Rorug03G0132500 Rorug03G0132500 Rorug03G0132500 Rorug03G0132700 Rorug03G0132800 Rorug03G0205900 Rorug03G0206100 Rorug03G0206100 Rorug03G0206300 Rorug03G0206400 Rorug03G0206400 Rorug03G0240700 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug05G0322400 Rorug05G0339300 Rorug05G0339500 Rorug05G0362200 Rorug05G0362300 Rorug05G0362400 Rorug05G0362600 Rorug05G0362700 Rorug05G0362800 Rorug05G0363100 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0459900 Rorug05G0464600 Rorug05G0465000 Rorug05G0465100 Rorug05G0465200 Rorug05G0466000 Rorug05G0466300 Rorug05G0466400 Rorug05G0466500 Rorug05G0466600 Rorug05G0466700 Rorug05G0466700 Rorug05G0466700 Rorug05G0466800 Rorug05G0466900 Rorug05G0468100 Rorug05G0562200 Rorug05G0562300 Rorug06G0084400 Rorug06G0084500 Rorug06G0084500 Rorug06G0084600 Rorug07G0136400 Rorug07G0204500 Rorug07G0204600 Rorug07G0221500
rosa_samantha Rh5CG438200 Rh5CG569900 Rh6AG080700 Rh7CG362800 Rh7DG275900 Rh7DG343100
rosa_wichuraiana Rw0G004790 Rw0G008160 Rw0G008170 Rw0G008200 Rw0G008210 Rw0G012980 Rw0G013670 Rw0G019920 Rw0G020380 Rw0G022790 Rw0G022800 Rw0G023350 Rw1G005530 Rw1G021740 Rw3G013910 Rw3G015980 Rw3G023020 Rw3G023030 Rw3G025580 Rw5G027180 Rw5G037760 Rw5G037770 Rw5G037780 Rw5G037790 Rw5G037810 Rw5G037820 Rw5G039500 Rw5G039520 Rw5G039530 Rw5G039540 Rw5G039550 Rw5G039570 Rw5G039580 Rw5G039610 Rw5G039630 Rw5G039660 Rw5G042590 Rw5G047840 Rw5G048170 Rw5G048400 Rw5G048470 Rw5G048540 Rw6G007030 Rw6G007080 Rw6G007460 Rw6G017430 Rw7G023150 Rw7G023260 Rw7G029260 Rw7G029270 Rw7G030950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1081
AccI GTMKAC 2 cut(s) 42, 544
AciI CCGC 1 cut(s) 967
AclWI GGATC 4 cut(s) 262, 275, 1132, 1191
AcoI YGGCCR 1 cut(s) 1004
AcsI RAATTY 2 cut(s) 165, 321
AcuI CTGAAG 1 cut(s) 978
AfiI CCNNNNNNNGG 3 cut(s) 400, 583, 1081
AjuI GAANNNNNNNTTGG 2 cut(s) 707, 739
AluBI AGCT 7 cut(s) 456, 611, 687, 876, 983, 1069, 1247
AluI AGCT 7 cut(s) 456, 611, 687, 876, 983, 1069, 1247
Alw26I GTCTC 2 cut(s) 167, 636
AlwI GGATC 4 cut(s) 262, 275, 1132, 1191
Ama87I CYCGRG 1 cut(s) 831
AoxI GGCC 5 cut(s) 24, 573, 858, 961, 1004
ApaI GGGCCC 1 cut(s) 577
ApeKI GCWGC 3 cut(s) 611, 735, 1069
ApoI RAATTY 2 cut(s) 165, 321
AspLEI GCGC 2 cut(s) 10, 539
AspS9I GGNCC 3 cut(s) 573, 574, 859
AsuC2I CCSGG 1 cut(s) 265
AsuHPI GGTGA 3 cut(s) 88, 865, 988
AvaI CYCGRG 1 cut(s) 831
BaeGI GKGCMC 1 cut(s) 577
BalI TGGCCA 1 cut(s) 1006
BamHI GGATCC 1 cut(s) 267
BanII GRGCYC 1 cut(s) 577
BbsI GAAGAC 1 cut(s) 218
BbvI GCAGC 3 cut(s) 598, 722, 1056
BccI CCATC 3 cut(s) 417, 594, 650
BceAI ACGGC 1 cut(s) 378
BciVI GTATCC 1 cut(s) 151
BcnI CCSGG 1 cut(s) 265
BcoDI GTCTC 2 cut(s) 167, 636
BfaI CTAG 5 cut(s) 191, 528, 824, 873, 891
BfuI GTATCC 1 cut(s) 151
BisI GCNGC 3 cut(s) 612, 736, 1070
BlsI GCNGC 3 cut(s) 613, 737, 1071
Bme1390I CCNGG 1 cut(s) 265
BmeT110I CYCGRG 1 cut(s) 831
BmgT120I GGNCC 3 cut(s) 573, 574, 859
BmiI GGNNCC 3 cut(s) 262, 269, 575
BmrFI CCNGG 1 cut(s) 265
BmsI GCATC 3 cut(s) 338, 903, 1006
BpiI GAAGAC 1 cut(s) 218
BpuMI CCSGG 1 cut(s) 265
BsaAI YACGTR 1 cut(s) 518
BsaBI GATNNNNATC 1 cut(s) 408
BsaJI CCNNGG 1 cut(s) 399
Bsc4I CCNNNNNNNGG 3 cut(s) 400, 583, 1081
Bse1I ACTGG 1 cut(s) 1201
Bse8I GATNNNNATC 1 cut(s) 408
BseDI CCNNGG 1 cut(s) 399
BseGI GGATG 6 cut(s) 289, 409, 494, 605, 642, 918
BseJI GATNNNNATC 1 cut(s) 408
BseLI CCNNNNNNNGG 3 cut(s) 400, 583, 1081
BseNI ACTGG 1 cut(s) 1201
BseRI GAGGAG 1 cut(s) 221
BseSI GKGCMC 1 cut(s) 577
BseXI GCAGC 3 cut(s) 598, 722, 1056
BshFI GGCC 5 cut(s) 26, 575, 860, 963, 1006
BsiHKCI CYCGRG 1 cut(s) 831
BsiSI CCGG 1 cut(s) 264
BslI CCNNNNNNNGG 3 cut(s) 400, 583, 1081
BsmAI GTCTC 2 cut(s) 167, 636
BsmI GAATGC 2 cut(s) 10, 539
BsnI GGCC 5 cut(s) 26, 575, 860, 963, 1006
BsoBI CYCGRG 1 cut(s) 831
Bsp120I GGGCCC 1 cut(s) 573
Bsp1286I GDGCHC 1 cut(s) 577
Bsp143I GATC 3 cut(s) 267, 1137, 1183
Bsp19I CCATGG 1 cut(s) 399
BspACI CCGC 1 cut(s) 967
BspANI GGCC 5 cut(s) 26, 575, 860, 963, 1006
BspLI GGNNCC 3 cut(s) 262, 269, 575
BspPI GGATC 4 cut(s) 262, 275, 1132, 1191
BspQI GCTCTTC 1 cut(s) 220
BsrI ACTGG 1 cut(s) 1201
BssECI CCNNGG 1 cut(s) 399
BssMI GATC 3 cut(s) 267, 1137, 1183
BssT1I CCWWGG 1 cut(s) 399
Bst4CI ACNGT 1 cut(s) 1265
Bst6I CTCTTC 3 cut(s) 220, 290, 313
BstBAI YACGTR 1 cut(s) 518
BstC8I GCNNGC 4 cut(s) 878, 965, 985, 1067
BstDEI CTNAG 1 cut(s) 1187
BstDSI CCRYGG 1 cut(s) 399
BstENI CCTNNNNNAGG 1 cut(s) 581
BstF5I GGATG 6 cut(s) 289, 409, 494, 605, 642, 918
BstHHI GCGC 2 cut(s) 10, 539
BstKTI GATC 3 cut(s) 270, 1140, 1186
BstMAI GTCTC 2 cut(s) 167, 636
BstMBI GATC 3 cut(s) 267, 1137, 1183
BstMWI GCNNNNNNNGC 1 cut(s) 560
BstSCI CCNGG 1 cut(s) 263
BstSLI GKGCMC 1 cut(s) 577
BstV1I GCAGC 3 cut(s) 598, 722, 1056
BstV2I GAAGAC 1 cut(s) 218
BstX2I RGATCY 3 cut(s) 267, 1137, 1183
BstYI RGATCY 3 cut(s) 267, 1137, 1183
BsuI GTATCC 1 cut(s) 151
BsuRI GGCC 5 cut(s) 26, 575, 860, 963, 1006
BtgI CCRYGG 1 cut(s) 399
BtsCI GGATG 6 cut(s) 289, 409, 494, 605, 642, 918
BtsIMutI CAGTG 1 cut(s) 1194
Cac8I GCNNGC 4 cut(s) 878, 965, 985, 1067
CfoI GCGC 2 cut(s) 10, 539
Cfr13I GGNCC 3 cut(s) 573, 574, 859
CseI GACGC 1 cut(s) 896
CspCI CAANNNNNGTGG 2 cut(s) 16, 51
CviAII CATG 3 cut(s) 400, 720, 917
DdeI CTNAG 1 cut(s) 1187
DpnI GATC 3 cut(s) 269, 1139, 1185
DpnII GATC 3 cut(s) 267, 1137, 1183
DraI TTTAAA 1 cut(s) 199
EaeI YGGCCR 1 cut(s) 1004
Eam1104I CTCTTC 3 cut(s) 220, 290, 313
EarI CTCTTC 3 cut(s) 220, 290, 313
Eco130I CCWWGG 1 cut(s) 399
Eco24I GRGCYC 1 cut(s) 577
Eco32I GATATC 1 cut(s) 760
Eco57I CTGAAG 1 cut(s) 978
Eco88I CYCGRG 1 cut(s) 831
EcoNI CCTNNNNNAGG 1 cut(s) 581
EcoO109I RGGNCCY 3 cut(s) 573, 574, 859
EcoRI GAATTC 1 cut(s) 321
EcoRV GATATC 1 cut(s) 760
EcoT14I CCWWGG 1 cut(s) 399
EcoT22I ATGCAT 2 cut(s) 677, 918
EcoT38I GRGCYC 1 cut(s) 577
ErhI CCWWGG 1 cut(s) 399
FaeI CATG 3 cut(s) 403, 723, 920
FalI AAGNNNNNCTT 2 cut(s) 466, 498
FatI CATG 3 cut(s) 399, 719, 916
FblI GTMKAC 2 cut(s) 42, 544
Fnu4HI GCNGC 3 cut(s) 612, 736, 1070
FokI GGATG 6 cut(s) 296, 396, 481, 612, 629, 925
FriOI GRGCYC 1 cut(s) 577
Fsp4HI GCNGC 3 cut(s) 612, 736, 1070
FspBI CTAG 5 cut(s) 191, 528, 824, 873, 891
GlaI GCGC 2 cut(s) 9, 538
GluI GCNGC 3 cut(s) 612, 736, 1070
HaeIII GGCC 5 cut(s) 26, 575, 860, 963, 1006
HapII CCGG 1 cut(s) 264
HgaI GACGC 1 cut(s) 896
HhaI GCGC 2 cut(s) 10, 539
Hin1II CATG 3 cut(s) 403, 723, 920
Hin6I GCGC 2 cut(s) 8, 537
HinP1I GCGC 2 cut(s) 8, 537
HindIII AAGCTT 1 cut(s) 1245
HinfI GANTC 9 cut(s) 39, 305, 446, 629, 710, 812, 869, 1038, 1176
HpaII CCGG 1 cut(s) 264
HphI GGTGA 3 cut(s) 88, 865, 988
Hpy166II GTNNAC 2 cut(s) 43, 545
Hpy188I TCNGA 6 cut(s) 327, 439, 706, 958, 1164, 1288
Hpy188III TCNNGA 4 cut(s) 170, 581, 809, 929
Hpy8I GTNNAC 2 cut(s) 43, 545
Hpy99I CGWCG 1 cut(s) 621
HpyAV CCTTC 6 cut(s) 235, 460, 587, 850, 953, 1250
HpyCH4III ACNGT 1 cut(s) 1265
HpyCH4IV ACGT 1 cut(s) 517
HpyCH4V TGCA 7 cut(s) 182, 351, 675, 916, 1019, 1065, 1114
HpyF10VI GCNNNNNNNGC 1 cut(s) 560
HpyF3I CTNAG 1 cut(s) 1187
HpySE526I ACGT 1 cut(s) 517
Hsp92II CATG 3 cut(s) 403, 723, 920
HspAI GCGC 2 cut(s) 8, 537
Kzo9I GATC 3 cut(s) 267, 1137, 1183
LguI GCTCTTC 1 cut(s) 220
LmnI GCTCC 1 cut(s) 453
LpnPI CCDG 8 cut(s) 165, 277, 388, 525, 752, 969, 977, 1182
Lsp1109I GCAGC 3 cut(s) 598, 722, 1056
LweI GCATC 3 cut(s) 338, 903, 1006
MaeI CTAG 5 cut(s) 191, 528, 824, 873, 891
MaeII ACGT 1 cut(s) 517
MalI GATC 3 cut(s) 269, 1139, 1185
MboI GATC 3 cut(s) 267, 1137, 1183
MfeI CAATTG 1 cut(s) 765
MflI RGATCY 3 cut(s) 267, 1137, 1183
MhlI GDGCHC 1 cut(s) 577
MlsI TGGCCA 1 cut(s) 1006
MluNI TGGCCA 1 cut(s) 1006
MlyI GAGTC 4 cut(s) 48, 299, 638, 1185
MmeI TCCRAC 3 cut(s) 40, 67, 1247
MnlI CCTC 8 cut(s) 16, 199, 251, 281, 564, 577, 648, 649
Mox20I TGGCCA 1 cut(s) 1006
Mph1103I ATGCAT 2 cut(s) 677, 918
MscI TGGCCA 1 cut(s) 1006
MseI TTAA 9 cut(s) 117, 198, 234, 624, 683, 864, 944, 1172, 1232
Msp20I TGGCCA 1 cut(s) 1006
MspA1I CMGCKG 1 cut(s) 967
MspI CCGG 1 cut(s) 264
MspR9I CCNGG 1 cut(s) 265
MunI CAATTG 1 cut(s) 765
Mva1269I GAATGC 2 cut(s) 10, 539
MwoI GCNNNNNNNGC 1 cut(s) 560
NciI CCSGG 1 cut(s) 265
NcoI CCATGG 1 cut(s) 399
NdeII GATC 3 cut(s) 267, 1137, 1183
NlaIII CATG 3 cut(s) 403, 723, 920
NlaIV GGNNCC 3 cut(s) 262, 269, 575
NsiI ATGCAT 2 cut(s) 677, 918
PciSI GCTCTTC 1 cut(s) 220
PctI GAATGC 2 cut(s) 10, 539
PfeI GAWTC 5 cut(s) 446, 710, 812, 869, 1038
PflMI CCANNNNNTGG 1 cut(s) 1081
PkrI GCNGC 3 cut(s) 613, 737, 1071
PleI GAGTC 4 cut(s) 47, 299, 637, 1184
PpsI GAGTC 4 cut(s) 47, 299, 637, 1184
Ppu21I YACGTR 1 cut(s) 518
PspN4I GGNNCC 3 cut(s) 262, 269, 575
PspOMI GGGCCC 1 cut(s) 573
PspPI GGNCC 3 cut(s) 573, 574, 859
PsuI RGATCY 3 cut(s) 267, 1137, 1183
SapI GCTCTTC 1 cut(s) 220
SaqAI TTAA 9 cut(s) 117, 198, 234, 624, 683, 864, 944, 1172, 1232
SatI GCNGC 3 cut(s) 612, 736, 1070
Sau3AI GATC 3 cut(s) 267, 1137, 1183
Sau96I GGNCC 3 cut(s) 573, 574, 859
SchI GAGTC 4 cut(s) 48, 299, 638, 1185
ScrFI CCNGG 1 cut(s) 265
SduI GDGCHC 1 cut(s) 577
SfaNI GCATC 3 cut(s) 338, 903, 1006
SsiI CCGC 1 cut(s) 967
SspMI CTAG 5 cut(s) 191, 528, 824, 873, 891
StyD4I CCNGG 1 cut(s) 263
StyI CCWWGG 1 cut(s) 399
TaaI ACNGT 1 cut(s) 1265
TaiI ACGT 1 cut(s) 520
TaqI TCGA 1 cut(s) 616
TfiI GAWTC 5 cut(s) 446, 710, 812, 869, 1038
Tru1I TTAA 9 cut(s) 117, 198, 234, 624, 683, 864, 944, 1172, 1232
Tru9I TTAA 9 cut(s) 117, 198, 234, 624, 683, 864, 944, 1172, 1232
TscAI CASTG 1 cut(s) 1201
TseI GCWGC 3 cut(s) 611, 735, 1069
TspDTI ATGAA 5 cut(s) 17, 176, 939, 1182, 1194
TspGWI ACGGA 2 cut(s) 60, 612
TspRI CASTG 1 cut(s) 1201
Van91I CCANNNNNTGG 1 cut(s) 1081
XagI CCTNNNNNAGG 1 cut(s) 581
XapI RAATTY 2 cut(s) 165, 321
XmiI GTMKAC 2 cut(s) 42, 544
XspI CTAG 5 cut(s) 191, 528, 824, 873, 891
Zsp2I ATGCAT 2 cut(s) 677, 918
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.