Rorug05G0339300

Disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000085
Physical Location & Seq
Reverse (-)
41226164 .. 41230952
4789 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0339300.1

Sequence Viewer

Length: 2910 bp
ATGGATAGGAAGTGGATGGTAGGCAATTTCCTGTTTTTGTGGCTATTGGCTGTGGTTTATGGTGCCACTGACCCTGCTGATATGAAGATTCTGAATGATTTCAGAATAGGGTTGGAGAATCCAGAGCTTCTTAAATGGCCAGAAAATGGGGATGACCCTTGTGGCTCCAAATGGCCTCATGTGTTTTGTAGTGGGGATAGAGTTACACAGATTCAAGTTCAGGGTATGGGGATTAAAGGACCTCTGCCTCAGAACTTTAATCAGCTCTCAAAGCTCTACAACCTTGGTCTTCAAAAGAACAACTTCAATGGCAAGTTACCCACGTTTAGTGGCTTATCTGAACTGCAATATGCTTATTTGGATAACAATGATTTTGATACTATCCCGTCCGATTTCTTCAATGGCCTTACCAGTCTCTCAGTCATGGCTTTGGATAACATTCCGCTGAATGCGTCTACCGGGTGGTCTATTCCTAATGAGTTAGAAAACTCAGCTCAGCTACAAAATCTTTCCTTGATTGAGTGTAACTTGGTTGGACAACTGCCTGAATTCTTAGGCACATTGCCGAATCTCAGGATGCTGCAACTTTCGTTTAACAGATTAACTGGTGGTTTGCCCAAGAGTTTTGGACAGTCTTTGTTGCAGATTTTGTGGTTGAATAATCAAGATGGTGGTGGGATGACTGGTCCAATTGATGTTATTGGATCAATGACGTCTTTGACACAGGTTTGGCTGCATGGAAACAAATTCACAGGGACAATACCAGAGAACATTGGAGATCTTGTATCTCTTAAGGAACTCAACCTCAATGGTAACCAACTTGTTGGTCAGATTCCTCAAGCATTGGCTGACTTGAAGCTCGACAAATTGGACCTGGCAAACAACCAGTTAATGGGTGCAATACCCAAGTTTCAGTCTGGTAATATTTCCTATAGTTCTAATTCATTTTGTCAAACTGATCCTGGGCTTCTATGTGCCCCACAAGTTACCGCACTTCTGGATTTTCTTGGTGATCTGAGTTACCCATCTAGTCTGACCTCTGACTGGTCTGGCAATGACCCCTGTGGGGGGCCATGGTTGGGAATAAGTTGCAATCCGCAGTCGAAAGTTTCTGTCATCAATTTGCCTAGGCGCAAGCTAAATGGTACTCTGAGTCCTTCACTTGTGAATTTAGATTCTCTGATTGATATTAGGCTTGCTGGAAACAATATAAGTGGTACAGTTCCTACTAACCTCACTGAGTTGAAATCCTTGACAACATTGGATATAAGTGGAAACAATATTGAGCCTCCATTACCAAAATTTCGTGACAATGTGAGACTCATCACCGATGGAAATCCTCTTCTAGTTGCTAATAAAACAGCCCCGTCTCCTTTCCCTACCAGAAGCCCACCCCCACTCCAACCTCCAGCTCCAGCAGACAATCCGCCACCAGGTACCACAAAACCACCTCAATCACCAGTTTCCCTTAGTCCACCTTCGCCAACTCACTCAAATGCAGGTGCACCTAAGTCGGAATCTCAACTCAAAAGCTCCAAAAAATCTAAACCAGTTATTGTTGTGGCTGGAGTTGCAGTTATAGCTGTATTTGTGATTCTTCTGTTGATGTGTCTATCTATATACTGGTGCAAGTACAGAAAAAACAACTTGGAGGCTCCTTGTTCCATTGTGGTTCACCCTAAAGACCCATCTGATCCAGCAAACAAGCTTAAGATTGCAGTTTCTAGCAATACAAACGGAAGCTTATCAACTAAAACTGGGACTACTTATTTGAGTAACAACAGCAGTGGAACACAAAGTTCTTATATGACTGATTCGGGTAACCTTGTCATATCTGTTCAAGTTCTTCGAAAGGTGACCAATAACTTTGCACCTGAAAACGAGCTAGGGCATGGTGGATTTGGAACTGTTTACAAGGGTGAACTAGAAGATGGTACAAATCTGGCTGTTAAGAGAATGGAGGGTGGTGTAATCAGCAGTAAAGGATTGGATGAATTTCAGGCAGAAATTGCTGTACTTTCCAAAGTCCGTCATCGACATTTGGTTTCTCTGTTGGGGTACTCCGTTGAAGGGAGTGAAAGGCTTCTTGTCTATGAGTATATGTCTCAAGGCGCTCTTAGCAGGCATCTTTTCCATTGGAAGACCCTGAGTCTGAAGCCTTTGTCTTGGACAAGGAGACTTATAATTGCATTGGATGTTGCCAGAGGGGTGGAGTATCTGCACAGCTTAGCTCGCCAGACCTTCATTCACAGAGATCTCAAATCTTCTAATATTCTTTTGGGTGATGACTTCCGTGCAAAAGTTTCGGATTTTGGATTGGTTAAACTTGCTCCAGATGGAGAGAAATCTGTTGCGACTAGGCTTGCTGGGACATTTGGATACCTTGCCCCTGAATATGCAGTGATGGGGAAAATCACAACTAAAGTAGATGTGTTCAGCTTTGGCGTCGTGTTAATGGAGCTTGTGACTGGATTAATGGCACTGGATGAGAACCGGCCCGAGGAAAGTCGTTACTTGGCTGAGTGGTTTTGGCGAATCAAGTCAAGCAAGGAGAAGCTTATGGCTGCAGTTGATCCAACTATTGAGGTTACTGAAGAAACCTTTGAGAGCATCTCCTTAATAGCTGATCTTGCTGGACATTGCACTGCGAGGGAGCCAACACATCGGCCTGACATGGGACATGCAGTGAACGTGCTAGGCCAACTTGTTGAAAAGTGGAAACCAGTTGATGAAGAATCAGAAAGTCTCTCTGGAATCGATTATAATCAACCTCTTCCCCAGATGCTAAAAGTTTGGCAGCAAGCGGAAAGCAGAGAGGTCAGCTATACTAGCCTGGAGGACAGCAAGGGAAGTATTCCTGCTAGACCCGCTGGATTTGCAGATTCCTTCACTTCTACCGATGGTCGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC TIR

Protein Analysis

969

Amino Acids

105.6

Weight (kDa)

5.81

Isoelectric Point (pI)

37.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 160 - 283 5.9e-07 Leucine-rich repeat region
LRR_8 PF13855 239 - 297 7.8e-07 Leucine rich repeat
LRRNT_2 PF08263 327 - 365 2.5e-06 Leucine rich repeat N-terminal domain
PK_Tyr_Ser-Thr PF07714 626 - 896 2.1e-43 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 626 - 896 1.8e-42 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000085)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g05721 FvH4_2g05721 FvH4_3g35820 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35890 FvH4_3g35920 FvH4_3g38670 FvH4_3g43650 FvH4_3g43650 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44000 FvH4_3g44070 FvH4_5g01271 FvH4_5g02970 FvH4_5g02970 FvH4_5g02970 FvH4_5g27640 FvH4_5g27640 FvH4_5g27640 FvH4_6g05393 FvH4_6g52372 FvH4_7g06680 FvH4_7g12671 FvH4_7g13640 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31110 FvH4_7g31510
malus_domestica MD09G1227900.v1.1 MD11G1019800.v1.1 MD11G1020500.v1.1
prunus_persica Prupe.1G542800_v2.0.a1 Prupe.1G542800_v2.0.a1
pyrus_communis pycom11g01460 pycom11g01490 pycom11g01530 pycom11g01570 pycom15g35490
rosa_chinensis RchiOBHm_Chr1g0353711 RchiOBHm_Chr3g0473211 RchiOBHm_Chr3g0473291 RchiOBHm_Chr3g0473341 RchiOBHm_Chr3g0473381 RchiOBHm_Chr3g0473391 RchiOBHm_Chr3g0473441 RchiOBHm_Chr3g0473481 RchiOBHm_Chr3g0473531 RchiOBHm_Chr3g0473561 RchiOBHm_Chr3g0473571 RchiOBHm_Chr3g0483491 RchiOBHm_Chr3g0488681 RchiOBHm_Chr5g0059311 RchiOBHm_Chr5g0061291 RchiOBHm_Chr5g0061301 RchiOBHm_Chr5g0061331 RchiOBHm_Chr5g0064081 RchiOBHm_Chr5g0064111 RchiOBHm_Chr5g0064151 RchiOBHm_Chr5g0064171 RchiOBHm_Chr5g0069721 RchiOBHm_Chr5g0069731 RchiOBHm_Chr5g0069741 RchiOBHm_Chr5g0078251 RchiOBHm_Chr5g0078301 RchiOBHm_Chr5g0079511 RchiOBHm_Chr5g0079791 RchiOBHm_Chr5g0079811 RchiOBHm_Chr5g0079861 RchiOBHm_Chr5g0079881 RchiOBHm_Chr5g0080241 RchiOBHm_Chr5g0080281 RchiOBHm_Chr5g0080371 RchiOBHm_Chr5g0080671 RchiOBHm_Chr6g0256601 RchiOBHm_Chr6g0274791 RchiOBHm_Chr7g0221971 RchiOBHm_Chr7g0221981
rosa_laevigata RLG00000002106 RLG00000013523 RLG00000014806 RLG00000024010 RLG00000035451 RLG00000035455 RLG00000035464 RLG00000035705 RLG00000036094 RLG00000036817 RLG00000036825 RLG00000036826 RLG00000036848
rosa_multiflora Rmu_co8200400.1_g000001 Rmu_co8473147.1_g000001 Rmu_sc0000394.1_g000030 Rmu_sc0000555.1_g000030 Rmu_sc0000595.1_g000002 Rmu_sc0000595.1_g000006 Rmu_sc0000595.1_g000029 Rmu_sc0000689.1_g000018 Rmu_sc0000689.1_g000032 Rmu_sc0000689.1_g000041 Rmu_sc0000738.1_g000025 Rmu_sc0000826.1_g000016 Rmu_sc0000908.1_g000016 Rmu_sc0000908.1_g000019 Rmu_sc0000908.1_g000021 Rmu_sc0001208.1_g000087 Rmu_sc0001639.1_g000004 Rmu_sc0002075.1_g000004 Rmu_sc0002075.1_g000009 Rmu_sc0002187.1_g000042 Rmu_sc0002187.1_g000043 Rmu_sc0002187.1_g000060 Rmu_sc0002513.1_g000025 Rmu_sc0002983.1_g000008 Rmu_sc0003012.1_g000004 Rmu_sc0003069.1_g000019 Rmu_sc0003069.1_g000020 Rmu_sc0003069.1_g000047 Rmu_sc0003069.1_g000051 Rmu_sc0003069.1_g000053 Rmu_sc0003131.1_g000014 Rmu_sc0003514.1_g000003 Rmu_sc0003547.1_g000006 Rmu_sc0003547.1_g000008 Rmu_sc0004325.1_g000021 Rmu_sc0004482.1_g000004 Rmu_sc0004482.1_g000022 Rmu_sc0005006.1_g000004 Rmu_sc0005006.1_g000009 Rmu_sc0005006.1_g000010 Rmu_sc0005194.1_g000002 Rmu_sc0005194.1_g000003 Rmu_sc0005834.1_g000002 Rmu_sc0005947.1_g000023 Rmu_sc0006792.1_g000026 Rmu_sc0007612.1_g000001 Rmu_sc0007793.1_g000024 Rmu_sc0007793.1_g000025 Rmu_sc0008050.1_g000015 Rmu_sc0008336.1_g000003 Rmu_sc0010248.1_g000002 Rmu_sc0011921.1_g000001 Rmu_sc0011921.1_g000006 Rmu_sc0012138.1_g000001 Rmu_sc0016164.1_g000015 Rmu_sc0018807.1_g000005 Rmu_sc0030948.1_g000001 Rmu_sc0042587.1_g000001 Rmu_ssc0000170.1_g000020 Rmu_ssc0000170.1_g000026 Rmu_ssc0000170.1_g000029
rosa_roxburghii Rroxscaffold_1G00003040 Rroxscaffold_1G00003080 Rroxscaffold_1G00003430 Rroxscaffold_1G00003490 Rroxscaffold_1G00011370 Rroxscaffold_1G00016780 Rroxscaffold_1G00019390 Rroxscaffold_1G00019400 Rroxscaffold_1G00019420 Rroxscaffold_1G00021170 Rroxscaffold_3G00237530 Rroxscaffold_3G00246470 Rroxscaffold_4G00301730 Rroxscaffold_4G00309300 Rroxscaffold_6G00398250 Rroxscaffold_6G00398270 Rroxscaffold_6G00398280 Rroxscaffold_6G00408070 Rroxscaffold_7G00193940 Rroxscaffold_7G00209570
rosa_rugosa Rorug01G0237100 Rorug03G0098200 Rorug03G0132200 Rorug03G0132400 Rorug03G0132500 Rorug03G0132500 Rorug03G0132500 Rorug03G0132700 Rorug03G0132800 Rorug03G0205900 Rorug03G0206100 Rorug03G0206100 Rorug03G0206300 Rorug03G0206400 Rorug03G0206400 Rorug03G0240700 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug03G0241800 Rorug05G0322400 Rorug05G0339300 Rorug05G0339500 Rorug05G0362200 Rorug05G0362300 Rorug05G0362400 Rorug05G0362600 Rorug05G0362700 Rorug05G0362800 Rorug05G0363100 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0399200 Rorug05G0459900 Rorug05G0464600 Rorug05G0465000 Rorug05G0465100 Rorug05G0465200 Rorug05G0466000 Rorug05G0466300 Rorug05G0466400 Rorug05G0466500 Rorug05G0466600 Rorug05G0466700 Rorug05G0466700 Rorug05G0466700 Rorug05G0466800 Rorug05G0466900 Rorug05G0468100 Rorug05G0562200 Rorug05G0562300 Rorug06G0084400 Rorug06G0084500 Rorug06G0084500 Rorug06G0084600 Rorug07G0136400 Rorug07G0204500 Rorug07G0204600 Rorug07G0221500
rosa_samantha Rh5CG438200 Rh5CG569900 Rh6AG080700 Rh7CG362800 Rh7DG275900 Rh7DG343100
rosa_wichuraiana Rw0G004790 Rw0G008160 Rw0G008170 Rw0G008200 Rw0G008210 Rw0G012980 Rw0G013670 Rw0G019920 Rw0G020380 Rw0G022790 Rw0G022800 Rw0G023350 Rw1G005530 Rw1G021740 Rw3G013910 Rw3G015980 Rw3G023020 Rw3G023030 Rw3G025580 Rw5G027180 Rw5G037760 Rw5G037770 Rw5G037780 Rw5G037790 Rw5G037810 Rw5G037820 Rw5G039500 Rw5G039520 Rw5G039530 Rw5G039540 Rw5G039550 Rw5G039570 Rw5G039580 Rw5G039610 Rw5G039630 Rw5G039660 Rw5G042590 Rw5G047840 Rw5G048170 Rw5G048400 Rw5G048470 Rw5G048540 Rw6G007030 Rw6G007080 Rw6G007460 Rw6G017430 Rw7G023150 Rw7G023260 Rw7G029260 Rw7G029270 Rw7G030950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 2183, 2763
AarI CACCTGC 1 cut(s) 1490
AatII GACGTC 1 cut(s) 716
Acc36I ACCTGC 1 cut(s) 1490
Acc65I GGTACC 1 cut(s) 1436
AccB1I GGYRCC 2 cut(s) 62, 1436
AccB7I CCANNNNNTGG 2 cut(s) 146, 892
AccI GTMKAC 1 cut(s) 455
AciI CCGC 6 cut(s) 443, 990, 1097, 1427, 2804, 2868
AclWI GGATC 4 cut(s) 712, 953, 1688, 2567
AcoI YGGCCR 1 cut(s) 137
AcsI RAATTY 5 cut(s) 548, 746, 1168, 1301, 1994
AcuI CTGAAG 2 cut(s) 2174, 2613
AcyI GRCGYC 2 cut(s) 713, 2445
AfaI GTAC 7 cut(s) 1147, 1219, 1438, 1634, 1936, 2016, 2060
AflII CTTAAG 2 cut(s) 791, 1709
AhdI GACNNNNNGTC 1 cut(s) 2148
AjnI CCWGG 4 cut(s) 873, 961, 1432, 2832
Alw21I GWGCWC 1 cut(s) 1507
Alw26I GTCTC 6 cut(s) 419, 1312, 1374, 2109, 2170, 2750
Alw44I GTGCAC 1 cut(s) 1503
AlwI GGATC 4 cut(s) 712, 953, 1688, 2567
Ama87I CYCGRG 1 cut(s) 2498
AoxI GGCC 7 cut(s) 137, 173, 403, 1070, 2495, 2666, 2698
ApaLI GTGCAC 1 cut(s) 1503
ApeKI GCWGC 4 cut(s) 580, 733, 2564, 2797
ApoI RAATTY 5 cut(s) 548, 746, 1168, 1301, 1994
ArsI GACNNNNNNTTYG 2 cut(s) 1753, 1785
AseI ATTAAT 1 cut(s) 2474
Asp700I GAANNNNTTC 3 cut(s) 98, 302, 2082
Asp718I GGTACC 1 cut(s) 1436
AspA2I CCTAGG 1 cut(s) 1127
AspLEI GCGC 2 cut(s) 1134, 2114
AspS9I GGNCC 5 cut(s) 239, 686, 871, 1070, 2496
AsuC2I CCSGG 1 cut(s) 460
AsuHPI GGTGA 7 cut(s) 1022, 1318, 1449, 1667, 1867, 1931, 2294
AsuII TTCGAA 1 cut(s) 1849
AvaI CYCGRG 1 cut(s) 2498
AvaII GGWCC 3 cut(s) 239, 686, 871
AvrII CCTAGG 1 cut(s) 1127
BaeGI GKGCMC 2 cut(s) 979, 1507
BalI TGGCCA 1 cut(s) 139
BanI GGYRCC 2 cut(s) 62, 1436
BbsI GAAGAC 2 cut(s) 281, 2147
Bbv12I GWGCWC 1 cut(s) 1507
BbvI GCAGC 4 cut(s) 567, 720, 2551, 2809
BccI CCATC 9 cut(s) 10, 662, 1033, 1325, 1696, 1925, 2330, 2398, 2894
BcgI CGANNNNNNTGC 4 cut(s) 1494, 1528, 2286, 2320
BciT130I CCWGG 4 cut(s) 875, 963, 1434, 2834
BciVI GTATCC 1 cut(s) 2372
BcnI CCSGG 1 cut(s) 460
BcoDI GTCTC 6 cut(s) 419, 1312, 1374, 2109, 2170, 2750
BfmI CTRYAG 2 cut(s) 931, 2565
BfoI RGCGCY 1 cut(s) 2115
BfrI CTTAAG 2 cut(s) 791, 1709
BfuAI ACCTGC 1 cut(s) 1490
BfuI GTATCC 1 cut(s) 2372
BglII AGATCT 2 cut(s) 778, 2254
BisI GCNGC 4 cut(s) 581, 734, 2565, 2798
BlnI CCTAGG 1 cut(s) 1127
BlpI GCTNAGC 2 cut(s) 495, 2227
BlsI GCNGC 4 cut(s) 582, 735, 2566, 2799
Bme1390I CCNGG 5 cut(s) 460, 875, 963, 1434, 2834
Bme18I GGWCC 3 cut(s) 239, 686, 871
BmeRI GACNNNNNGTC 1 cut(s) 2148
BmeT110I CYCGRG 1 cut(s) 2498
BmgT120I GGNCC 5 cut(s) 239, 686, 871, 1070, 2496
BmiI GGNNCC 6 cut(s) 64, 166, 1071, 1438, 1656, 2655
BmrFI CCNGG 5 cut(s) 460, 875, 963, 1434, 2834
BmrI ACTGGG 1 cut(s) 1767
BmsI GCATC 4 cut(s) 567, 2134, 2619, 2772
BmuI ACTGGG 1 cut(s) 1767
BpiI GAAGAC 2 cut(s) 281, 2147
BplI GAGNNNNNCTC 2 cut(s) 2597, 2629
BpmI CTGGAG 5 cut(s) 1392, 1398, 1587, 2316, 2855
Bpu1102I GCTNAGC 2 cut(s) 495, 2227
Bpu14I TTCGAA 1 cut(s) 1849
BpuEI CTTGAG 2 cut(s) 822, 2091
BpuMI CCSGG 1 cut(s) 460
Bsa29I ATCGAT 1 cut(s) 2757
BsaBI GATNNNNATC 2 cut(s) 1335, 2763
BsaHI GRCGYC 2 cut(s) 713, 2445
BsaJI CCNNGG 5 cut(s) 283, 962, 1073, 1127, 2499
BsaXI ACNNNNNCTCC 6 cut(s) 768, 798, 1383, 1413, 1560, 1590
Bse118I RCCGGY 1 cut(s) 2493
Bse3DI GCAATG 3 cut(s) 560, 1060, 2638
Bse8I GATNNNNATC 2 cut(s) 1335, 2763
BseBI CCWGG 4 cut(s) 875, 963, 1434, 2834
BseCI ATCGAT 1 cut(s) 2757
BseDI CCNNGG 5 cut(s) 283, 962, 1073, 1127, 2499
BseGI GGATG 7 cut(s) 21, 157, 582, 684, 1996, 2200, 2491
BseJI GATNNNNATC 2 cut(s) 1335, 2763
BseMI GCAATG 3 cut(s) 560, 1060, 2638
BseSI GKGCMC 2 cut(s) 979, 1507
BseXI GCAGC 4 cut(s) 567, 720, 2551, 2809
BseYI CCCAGC 1 cut(s) 2366
BsgI GTGCAG 1 cut(s) 2204
BshFI GGCC 7 cut(s) 139, 175, 405, 1072, 2497, 2668, 2700
BshNI GGYRCC 2 cut(s) 62, 1436
BshVI ATCGAT 1 cut(s) 2757
BsiHKAI GWGCWC 1 cut(s) 1507
BsiHKCI CYCGRG 1 cut(s) 2498
BsiSI CCGG 2 cut(s) 459, 2494
BslFI GGGAC 4 cut(s) 769, 1774, 2383, 2691
BsmAI GTCTC 6 cut(s) 419, 1312, 1374, 2109, 2170, 2750
BsmBI CGTCTC 1 cut(s) 1374
BsmFI GGGAC 4 cut(s) 769, 1774, 2383, 2691
BsmI GAATGC 1 cut(s) 454
BsnI GGCC 7 cut(s) 139, 175, 405, 1072, 2497, 2668, 2700
BsoBI CYCGRG 1 cut(s) 2498
Bsp119I TTCGAA 1 cut(s) 1849
Bsp1286I GDGCHC 2 cut(s) 979, 1507
Bsp143I GATC 8 cut(s) 704, 778, 958, 1012, 1693, 2254, 2572, 2626
Bsp1720I GCTNAGC 2 cut(s) 495, 2227
Bsp19I CCATGG 1 cut(s) 1073
BspACI CCGC 6 cut(s) 443, 990, 1097, 1427, 2804, 2868
BspANI GGCC 7 cut(s) 139, 175, 405, 1072, 2497, 2668, 2700
BspDI ATCGAT 1 cut(s) 2757
BspLI GGNNCC 6 cut(s) 64, 166, 1071, 1438, 1656, 2655
BspMAI CTGCAG 1 cut(s) 2569
BspMI ACCTGC 1 cut(s) 1490
BspPI GGATC 4 cut(s) 712, 953, 1688, 2567
BspT104I TTCGAA 1 cut(s) 1849
BspT107I GGYRCC 2 cut(s) 62, 1436
BspTI CTTAAG 2 cut(s) 791, 1709
BsrDI GCAATG 3 cut(s) 560, 1060, 2638
BsrFI RCCGGY 1 cut(s) 2493
BssAI RCCGGY 1 cut(s) 2493
BssECI CCNNGG 5 cut(s) 283, 962, 1073, 1127, 2499
BssMI GATC 8 cut(s) 704, 778, 958, 1012, 1693, 2254, 2572, 2626
BssNI GRCGYC 2 cut(s) 713, 2445
BssT1I CCWWGG 3 cut(s) 283, 1073, 1127
Bst2UI CCWGG 4 cut(s) 875, 963, 1434, 2834
Bst4CI ACNGT 3 cut(s) 633, 1222, 1909
Bst6I CTCTTC 2 cut(s) 1347, 2778
BstACI GRCGYC 2 cut(s) 713, 2445
BstAFI CTTAAG 2 cut(s) 791, 1709
BstAPI GCANNNNNTGC 1 cut(s) 2009
BstBI TTCGAA 1 cut(s) 1849
BstC8I GCNNGC 6 cut(s) 1136, 1197, 2123, 2233, 2364, 2802
BstDSI CCRYGG 1 cut(s) 1073
BstEII GGTNACC 3 cut(s) 812, 1820, 1855
BstF5I GGATG 7 cut(s) 21, 157, 582, 684, 1996, 2200, 2491
BstH2I RGCGCY 1 cut(s) 2115
BstHHI GCGC 2 cut(s) 1134, 2114
BstKTI GATC 8 cut(s) 707, 781, 961, 1015, 1696, 2257, 2575, 2629
BstMAI GTCTC 6 cut(s) 419, 1312, 1374, 2109, 2170, 2750
BstMBI GATC 8 cut(s) 704, 778, 958, 1012, 1693, 2254, 2572, 2626
BstNI CCWGG 4 cut(s) 875, 963, 1434, 2834
BstNSI RCATGY 1 cut(s) 2684
BstPI GGTNACC 3 cut(s) 812, 1820, 1855
BstSCI CCNGG 5 cut(s) 458, 873, 961, 1432, 2832
BstSFI CTRYAG 2 cut(s) 931, 2565
BstSLI GKGCMC 2 cut(s) 979, 1507
BstV1I GCAGC 4 cut(s) 567, 720, 2551, 2809
BstV2I GAAGAC 2 cut(s) 281, 2147
BstX2I RGATCY 2 cut(s) 778, 2254
BstXI CCANNNNNNTGG 2 cut(s) 824, 2209
BstYI RGATCY 2 cut(s) 778, 2254
Bsu15I ATCGAT 1 cut(s) 2757
BsuI GTATCC 1 cut(s) 2372
BsuRI GGCC 7 cut(s) 139, 175, 405, 1072, 2497, 2668, 2700
BsuTUI ATCGAT 1 cut(s) 2757
BtgI CCRYGG 1 cut(s) 1073
BtsCI GGATG 7 cut(s) 21, 157, 582, 684, 1996, 2200, 2491
BtsI GCAGTG 4 cut(s) 1792, 2406, 2643, 2691
BtsIMutI CAGTG 7 cut(s) 66, 1236, 1792, 2406, 2480, 2643, 2691
BveI ACCTGC 1 cut(s) 1490
Cac8I GCNNGC 6 cut(s) 1136, 1197, 2123, 2233, 2364, 2802
CfoI GCGC 2 cut(s) 1134, 2114
Cfr10I RCCGGY 1 cut(s) 2493
Cfr13I GGNCC 5 cut(s) 239, 686, 871, 1070, 2496
ClaI ATCGAT 1 cut(s) 2757
CseI GACGC 2 cut(s) 441, 2434
CsiI ACCWGGT 1 cut(s) 1432
Csp6I GTAC 7 cut(s) 1146, 1218, 1437, 1633, 1935, 2015, 2059
CspCI CAANNNNNGTGG 4 cut(s) 1195, 1230, 1768, 1803
CviAII CATG 7 cut(s) 179, 424, 737, 1074, 1892, 2674, 2681
CviQI GTAC 7 cut(s) 1146, 1218, 1437, 1633, 1935, 2015, 2059
DpnI GATC 8 cut(s) 706, 780, 960, 1014, 1695, 2256, 2574, 2628
DpnII GATC 8 cut(s) 704, 778, 958, 1012, 1693, 2254, 2572, 2626
DriI GACNNNNNGTC 1 cut(s) 2148
EaeI YGGCCR 1 cut(s) 137
Eam1104I CTCTTC 2 cut(s) 1347, 2778
Eam1105I GACNNNNNGTC 1 cut(s) 2148
EarI CTCTTC 2 cut(s) 1347, 2778
EciI GGCGGA 1 cut(s) 1416
Eco130I CCWWGG 3 cut(s) 283, 1073, 1127
Eco47I GGWCC 3 cut(s) 239, 686, 871
Eco57I CTGAAG 2 cut(s) 2174, 2613
Eco88I CYCGRG 1 cut(s) 2498
Eco91I GGTNACC 3 cut(s) 812, 1820, 1855
EcoO109I RGGNCCY 1 cut(s) 239
EcoO65I GGTNACC 3 cut(s) 812, 1820, 1855
EcoRI GAATTC 1 cut(s) 548
EcoRII CCWGG 4 cut(s) 873, 961, 1432, 2832
EcoT14I CCWWGG 3 cut(s) 283, 1073, 1127
ErhI CCWWGG 3 cut(s) 283, 1073, 1127
Esp3I CGTCTC 1 cut(s) 1374
FaeI CATG 7 cut(s) 182, 427, 740, 1077, 1895, 2677, 2684
FalI AAGNNNNNCTT 4 cut(s) 287, 319, 2100, 2132
FaqI GGGAC 4 cut(s) 769, 1774, 2383, 2691
FatI CATG 7 cut(s) 178, 423, 736, 1073, 1891, 2673, 2680
FauI CCCGC 1 cut(s) 2875
FblI GTMKAC 1 cut(s) 455
Fnu4HI GCNGC 4 cut(s) 581, 734, 2565, 2798
FokI GGATG 7 cut(s) 28, 164, 589, 691, 2003, 2207, 2498
Fsp4HI GCNGC 4 cut(s) 581, 734, 2565, 2798
GlaI GCGC 2 cut(s) 1133, 2113
GluI GCNGC 4 cut(s) 581, 734, 2565, 2798
GsaI CCCAGC 1 cut(s) 2370
GsuI CTGGAG 5 cut(s) 1392, 1398, 1587, 2316, 2855
HaeII RGCGCY 1 cut(s) 2115
HaeIII GGCC 7 cut(s) 139, 175, 405, 1072, 2497, 2668, 2700
HapII CCGG 2 cut(s) 459, 2494
HgaI GACGC 2 cut(s) 441, 2434
HhaI GCGC 2 cut(s) 1134, 2114
Hin1I GRCGYC 2 cut(s) 713, 2445
Hin1II CATG 7 cut(s) 182, 427, 740, 1077, 1895, 2677, 2684
Hin6I GCGC 2 cut(s) 1132, 2112
HinP1I GCGC 2 cut(s) 1132, 2112
HindIII AAGCTT 3 cut(s) 1706, 1741, 2555
HpaII CCGG 2 cut(s) 459, 2494
HphI GGTGA 7 cut(s) 1022, 1318, 1449, 1667, 1867, 1931, 2294
Hpy166II GTNNAC 7 cut(s) 456, 1475, 1505, 1675, 1912, 1922, 2689
Hpy188III TCNNGA 7 cut(s) 122, 574, 665, 998, 1307, 2333, 2751
Hpy8I GTNNAC 7 cut(s) 456, 1475, 1505, 1675, 1912, 1922, 2689
Hpy99I CGWCG 1 cut(s) 2450
HpyAV CCTTC 5 cut(s) 1167, 1488, 2063, 2251, 2896
HpyCH4III ACNGT 3 cut(s) 633, 1222, 1909
HpyCH4IV ACGT 3 cut(s) 323, 713, 2691
HpySE526I ACGT 3 cut(s) 323, 713, 2691
Hsp92I GRCGYC 2 cut(s) 713, 2445
Hsp92II CATG 7 cut(s) 182, 427, 740, 1077, 1895, 2677, 2684
HspAI GCGC 2 cut(s) 1132, 2112
KpnI GGTACC 1 cut(s) 1440
Kzo9I GATC 8 cut(s) 704, 778, 958, 1012, 1693, 2254, 2572, 2626
LmnI GCTCC 7 cut(s) 170, 1417, 1538, 1660, 2335, 2458, 2653
Lsp1109I GCAGC 4 cut(s) 567, 720, 2551, 2809
LweI GCATC 4 cut(s) 567, 2134, 2619, 2772
MabI ACCWGGT 1 cut(s) 1432
MaeII ACGT 3 cut(s) 323, 713, 2691
MalI GATC 8 cut(s) 706, 780, 960, 1014, 1695, 2256, 2574, 2628
MboI GATC 8 cut(s) 704, 778, 958, 1012, 1693, 2254, 2572, 2626
MfeI CAATTG 1 cut(s) 690
MflI RGATCY 2 cut(s) 778, 2254
MhlI GDGCHC 2 cut(s) 979, 1507
MlsI TGGCCA 1 cut(s) 139
MluNI TGGCCA 1 cut(s) 139
MlyI GAGTC 3 cut(s) 1162, 1314, 2158
MmeI TCCRAC 5 cut(s) 93, 514, 1426, 1494, 2600
Mox20I TGGCCA 1 cut(s) 139
MroXI GAANNNNTTC 3 cut(s) 98, 302, 2082
MscI TGGCCA 1 cut(s) 139
MslI CAYNNNNRTG 1 cut(s) 1494
Msp20I TGGCCA 1 cut(s) 139
MspA1I CMGCKG 2 cut(s) 445, 2870
MspCI CTTAAG 2 cut(s) 791, 1709
MspI CCGG 2 cut(s) 459, 2494
MspR9I CCNGG 5 cut(s) 460, 875, 963, 1434, 2834
MunI CAATTG 1 cut(s) 690
Mva1269I GAATGC 1 cut(s) 454
MvaI CCWGG 4 cut(s) 875, 963, 1434, 2834
NciI CCSGG 1 cut(s) 460
NcoI CCATGG 1 cut(s) 1073
NdeII GATC 8 cut(s) 704, 778, 958, 1012, 1693, 2254, 2572, 2626
NlaIII CATG 7 cut(s) 182, 427, 740, 1077, 1895, 2677, 2684
NlaIV GGNNCC 6 cut(s) 64, 166, 1071, 1438, 1656, 2655
NmuCI GTSAC 3 cut(s) 1307, 1855, 2464
NspI RCATGY 1 cut(s) 2684
NspV TTCGAA 1 cut(s) 1849
PaqCI CACCTGC 1 cut(s) 1490
PctI GAATGC 1 cut(s) 454
PdmI GAANNNNTTC 3 cut(s) 98, 302, 2082
PflMI CCANNNNNTGG 2 cut(s) 146, 892
PkrI GCNGC 4 cut(s) 582, 735, 2566, 2799
PleI GAGTC 3 cut(s) 1161, 1314, 2157
PpsI GAGTC 3 cut(s) 1161, 1314, 2157
PpuMI RGGWCCY 1 cut(s) 239
PshBI ATTAAT 1 cut(s) 2474
PsiI TTATAA 2 cut(s) 2183, 2763
Psp5II RGGWCCY 1 cut(s) 239
Psp6I CCWGG 4 cut(s) 873, 961, 1432, 2832
PspEI GGTNACC 3 cut(s) 812, 1820, 1855
PspFI CCCAGC 1 cut(s) 2366
PspGI CCWGG 4 cut(s) 873, 961, 1432, 2832
PspN4I GGNNCC 6 cut(s) 64, 166, 1071, 1438, 1656, 2655
PspPI GGNCC 5 cut(s) 239, 686, 871, 1070, 2496
PspPPI RGGWCCY 1 cut(s) 239
PstI CTGCAG 1 cut(s) 2569
PsuI RGATCY 2 cut(s) 778, 2254
RsaI GTAC 7 cut(s) 1147, 1219, 1438, 1634, 1936, 2016, 2060
RsaNI GTAC 7 cut(s) 1146, 1218, 1437, 1633, 1935, 2015, 2059
RseI CAYNNNNRTG 1 cut(s) 1494
SatI GCNGC 4 cut(s) 581, 734, 2565, 2798
Sau3AI GATC 8 cut(s) 704, 778, 958, 1012, 1693, 2254, 2572, 2626
Sau96I GGNCC 5 cut(s) 239, 686, 871, 1070, 2496
SchI GAGTC 3 cut(s) 1162, 1314, 2158
ScrFI CCNGG 5 cut(s) 460, 875, 963, 1434, 2834
SduI GDGCHC 2 cut(s) 979, 1507
SexAI ACCWGGT 1 cut(s) 1432
SfaNI GCATC 4 cut(s) 567, 2134, 2619, 2772
SfcI CTRYAG 2 cut(s) 931, 2565
SfuI TTCGAA 1 cut(s) 1849
SinI GGWCC 3 cut(s) 239, 686, 871
SmiMI CAYNNNNRTG 1 cut(s) 1494
SmlI CTYRAG 4 cut(s) 791, 837, 1709, 2106
SmoI CTYRAG 4 cut(s) 791, 837, 1709, 2106
SsiI CCGC 6 cut(s) 443, 990, 1097, 1427, 2804, 2868
SspI AATATT 3 cut(s) 925, 1282, 2272
StyD4I CCNGG 5 cut(s) 458, 873, 961, 1432, 2832
StyI CCWWGG 3 cut(s) 283, 1073, 1127
TaaI ACNGT 3 cut(s) 633, 1222, 1909
TaiI ACGT 3 cut(s) 326, 716, 2694
TaqI TCGA 6 cut(s) 861, 1103, 1849, 2035, 2757, 2905
TatI WGTACW 2 cut(s) 1632, 2014
TscAI CASTG 7 cut(s) 73, 1243, 1792, 2406, 2487, 2650, 2691
TseFI GTSAC 3 cut(s) 1307, 1855, 2464
TseI GCWGC 4 cut(s) 580, 733, 2564, 2797
Tsp45I GTSAC 3 cut(s) 1307, 1855, 2464
TspDTI ATGAA 5 cut(s) 98, 933, 2007, 2233, 2745
TspGWI ACGGA 4 cut(s) 1752, 2018, 2053, 2282
TspRI CASTG 7 cut(s) 73, 1243, 1792, 2406, 2487, 2650, 2691
Van91I CCANNNNNTGG 2 cut(s) 146, 892
Vha464I CTTAAG 2 cut(s) 791, 1709
VneI GTGCAC 1 cut(s) 1503
VpaK11BI GGWCC 3 cut(s) 239, 686, 871
VspI ATTAAT 1 cut(s) 2474
XapI RAATTY 5 cut(s) 548, 746, 1168, 1301, 1994
XceI RCATGY 1 cut(s) 2684
XmaJI CCTAGG 1 cut(s) 1127
XmiI GTMKAC 1 cut(s) 455
XmnI GAANNNNTTC 3 cut(s) 98, 302, 2082
ZraI GACGTC 1 cut(s) 714
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.